AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0417140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0417140 MtrunA17_Chr3g0114521 99.229 389 3 0 1 389 1 389 0.0 792
Msa0417140 MtrunA17_Chr2g0315761 55.556 342 151 1 48 389 55 395 3.03e-137 397
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0417140 AT2G40490.1 77.926 376 80 2 15 389 21 394 0.0 609
Msa0417140 AT3G14930.2 53.026 347 162 1 43 389 54 399 1.64e-138 401
Msa0417140 AT3G14930.1 53.026 347 162 1 43 389 54 399 1.64e-138 401
Msa0417140 AT3G14930.3 54.180 323 147 1 67 389 1 322 1.17e-129 376

Find 116 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATTCTTACACCACTTTC+TGG 0.157805 3_2:-64226009 Msa0417140:CDS
TTTCAGACAAACGCAGATTT+TGG 0.175740 3_2:+64227348 None:intergenic
ATTCCATTTGACATTGTAAA+AGG 0.206118 3_2:-64225979 Msa0417140:CDS
TTGCAGTTAATATAAGATTT+TGG 0.231158 3_2:-64223013 Msa0417140:three_prime_UTR
TACGGTACACGGGCGAAGTA+TGG 0.247619 3_2:+64227421 None:intergenic
AATGGATTTGAATGGGTAAA+AGG 0.250908 3_2:+64227236 None:intergenic
TCAATTATTTGCTTCAAGTA+TGG 0.290572 3_2:+64223431 None:intergenic
ACTTGGCCTGCGGAGTGAAC+TGG 0.306505 3_2:+64225934 None:intergenic
AAATGTCGTTCTATATTTAG+AGG 0.312910 3_2:+64222889 None:intergenic
TCCATTCAATGTTCTCTTCC+AGG 0.315235 3_2:-64227219 Msa0417140:intron
AACTTAGTATTTGATTCCTT+TGG 0.330430 3_2:+64223079 None:intergenic
CTTGGATTGGACGGTTGATA+TGG 0.339881 3_2:-64223306 Msa0417140:CDS
ATGGACTACTAGATCATGAT+AGG 0.373446 3_2:-64227466 None:intergenic
GTTGATCCTGGTGTTCTGTT+TGG 0.376386 3_2:-64223236 Msa0417140:CDS
TTTCTCTAAAATAAAGAGAT+TGG 0.380766 3_2:-64224233 Msa0417140:CDS
ATCCTCTATGCAAGTGGATC+AGG 0.396912 3_2:-64223374 Msa0417140:CDS
CGATGCCGTGACCAAGGTTC+AGG 0.397386 3_2:+64223147 None:intergenic
TTGATATGGCTGACGGTAGA+AGG 0.402561 3_2:-64223292 Msa0417140:CDS
GAACATTGAATGGATTTGAA+TGG 0.412640 3_2:+64227228 None:intergenic
TAGAGGATAAGAGGGAGTTC+TGG 0.412953 3_2:+64223389 None:intergenic
GGCTGACGGTAGAAGGAGAT+TGG 0.418136 3_2:-64223285 Msa0417140:CDS
CCACTTGCATAGAGGATAAG+AGG 0.422510 3_2:+64223380 None:intergenic
CTGTACAGATATTCGATTCA+TGG 0.424244 3_2:-64223496 Msa0417140:CDS
AACATTGAATGGATTTGAAT+GGG 0.425887 3_2:+64227229 None:intergenic
ACATACGACGCCAGGGTAAA+CGG 0.433300 3_2:+64224280 None:intergenic
GATAATAAATCTGCAGTCCT+TGG 0.434879 3_2:-64224316 Msa0417140:CDS
GCGAAGTATGGGAAGGATAA+GGG 0.435189 3_2:+64227433 None:intergenic
TTACCTTGGATAGCTACATT+TGG 0.446082 3_2:+64223260 None:intergenic
GGCGAAGTATGGGAAGGATA+AGG 0.448675 3_2:+64227432 None:intergenic
GAGAGTTATATTACCCCATC+AGG 0.452559 3_2:+64226162 None:intergenic
GCTTGTCTCATAAGCCAAAC+AGG 0.452792 3_2:+64226933 None:intergenic
ATGTCGAAAGACCTCCTGTT+TGG 0.460725 3_2:-64226947 Msa0417140:CDS
CTTGGCCTGCGGAGTGAACT+GGG 0.461901 3_2:+64225935 None:intergenic
CTTGCGCTCCATTGTCAGCT+TGG 0.463609 3_2:+64223519 None:intergenic
CGAAAGAGCTGATTACTGAT+AGG 0.466357 3_2:-64223211 Msa0417140:CDS
CAGATCTTTCCCGGAATGAC+GGG 0.470670 3_2:+64226238 None:intergenic
AACGTATGGAACTGATTCCT+CGG 0.471977 3_2:+64225888 None:intergenic
CTGGCGTCGTATGTGGTTGA+AGG 0.472993 3_2:-64224271 Msa0417140:CDS
GTTTACCCTGGCGTCGTATG+TGG 0.473968 3_2:-64224278 Msa0417140:CDS
GTTGAGTTTCAGCTATGTTA+CGG 0.483371 3_2:+64227403 None:intergenic
CGAACTGCATTGAGCAAAAG+AGG 0.487266 3_2:+64226978 None:intergenic
CACGATACCGTGAGAAAGGC+TGG 0.489317 3_2:-64223185 Msa0417140:CDS
AAATGTGCTACATTCTCCTC+AGG 0.494178 3_2:+64223113 None:intergenic
CTTGGTCACGGCATCGTAGT+AGG 0.496571 3_2:-64223140 Msa0417140:CDS
GGAATATTCATTCCAGAAAG+TGG 0.500259 3_2:+64225997 None:intergenic
GTTTGGCTTATGAGACAAGC+TGG 0.502036 3_2:-64226930 Msa0417140:CDS
ACCTGGAAGAGAACATTGAA+TGG 0.506655 3_2:+64227218 None:intergenic
TTCAGCTATGTTACGGTACA+CGG 0.508482 3_2:+64227410 None:intergenic
CTTCAACCACATACGACGCC+AGG 0.512222 3_2:+64224272 None:intergenic
CGGTGTGGATGTTGTAAGCT+TGG 0.514049 3_2:-64223324 Msa0417140:CDS
AATTTCATTGCAACCGTGGA+AGG 0.514515 3_2:-64226193 Msa0417140:CDS
CTGAATCGTTCAAAATCCAC+TGG 0.515548 3_2:+64223458 None:intergenic
TGTGGGTGCTCCGTTTACCC+TGG 0.516470 3_2:-64224290 Msa0417140:CDS
CCCTCTACCAGCCTTTCTCA+CGG 0.518645 3_2:+64223178 None:intergenic
ACGGTACACGGGCGAAGTAT+GGG 0.519613 3_2:+64227422 None:intergenic
GCAAAAGTTTACAACATCAA+TGG 0.520601 3_2:-64223558 Msa0417140:CDS
ATTTGACATTGTAAAAGGCA+AGG 0.524512 3_2:-64225974 Msa0417140:CDS
GCTGACGGTAGAAGGAGATT+GGG 0.526942 3_2:-64223284 Msa0417140:CDS
GATACACGATACCGTGAGAA+AGG 0.528071 3_2:-64223189 Msa0417140:CDS
ACCGTGAGAAAGGCTGGTAG+AGG 0.529078 3_2:-64223179 Msa0417140:CDS
TGGATGTTGTAAGCTTGGAT+TGG 0.533084 3_2:-64223319 Msa0417140:CDS
ATCCAAGGTAATGTTGATCC+TGG 0.536465 3_2:-64223248 Msa0417140:CDS
ATGGATTTGAATGGGTAAAA+GGG 0.537828 3_2:+64227237 None:intergenic
TCAGATCTTTCCCGGAATGA+CGG 0.538694 3_2:+64226237 None:intergenic
GTTATATTACCCCATCAGGC+TGG 0.542394 3_2:+64226166 None:intergenic
ATCTGAAAACGTTGATCTTG+TGG 0.544982 3_2:-64226220 Msa0417140:CDS
CACCAGGATCAACATTACCT+TGG 0.550632 3_2:+64223246 None:intergenic
TGTACAGATATTCGATTCAT+GGG 0.557652 3_2:-64223495 Msa0417140:CDS
TTTGACCCAGTTCACTCCGC+AGG 0.557974 3_2:-64225940 Msa0417140:CDS
CCTCTTATCCTCTATGCAAG+TGG 0.559600 3_2:-64223380 Msa0417140:CDS
CTTGAGAGAATAGCATTGAC+CGG 0.561094 3_2:-64223344 Msa0417140:CDS
GATAGTGCTTCACCAACGTA+TGG 0.570324 3_2:+64225874 None:intergenic
CTCCTGATCCACTTGCATAG+AGG 0.573987 3_2:+64223372 None:intergenic
GCTAACTACACCGCAAAACA+TGG 0.575089 3_2:+64227305 None:intergenic
TTTGACATTGTAAAAGGCAA+GGG 0.580301 3_2:-64225973 Msa0417140:CDS
GTGAACTGGGTCAAATATGA+CGG 0.581289 3_2:+64225948 None:intergenic
CACTTGATCAACTTGGCCTG+CGG 0.582378 3_2:+64225924 None:intergenic
TTTGAATGGGTAAAAGGGTG+TGG 0.582685 3_2:+64227242 None:intergenic
ACGTATGGAACTGATTCCTC+GGG 0.583383 3_2:+64225889 None:intergenic
CTCTATGCAAGTGGATCAGG+AGG 0.584281 3_2:-64223371 Msa0417140:CDS
GGACCAAATGTAGCTATCCA+AGG 0.588652 3_2:-64223263 Msa0417140:CDS
TGTTGTAAGCTTGGATTGGA+CGG 0.589620 3_2:-64223315 Msa0417140:CDS
ACTCCCTCACTTGATCAACT+TGG 0.589624 3_2:+64225917 None:intergenic
ATTGGCATTCTCTGAACCAA+AGG 0.592895 3_2:-64224215 Msa0417140:intron
TGAACTGGGTCAAATATGAC+GGG 0.600113 3_2:+64225949 None:intergenic
CACTTGCATAGAGGATAAGA+GGG 0.600254 3_2:+64223381 None:intergenic
GGGAAACATATCCTGAACCT+TGG 0.602324 3_2:-64223158 Msa0417140:CDS
TTTGGCTTATGAGACAAGCT+GGG 0.604715 3_2:-64226929 Msa0417140:CDS
TTCGATCCAAACAGAACACC+AGG 0.613403 3_2:+64223230 None:intergenic
ACAAGCTGGGAGGTACATGA+AGG 0.615658 3_2:-64226916 Msa0417140:intron
GGCAACAGAGCTTAGTCCAG+TGG 0.616272 3_2:-64223474 Msa0417140:CDS
CAGGCCAAGTTGATCAAGTG+AGG 0.617997 3_2:-64225921 Msa0417140:CDS
TGGACTACTAGATCATGATA+GGG 0.618375 3_2:-64227465 None:intergenic
CTACTACGATGCCGTGACCA+AGG 0.620641 3_2:+64223141 None:intergenic
GGATAAGAGGGAGTTCTGGA+TGG 0.622692 3_2:+64223393 None:intergenic
TCAGGCTGGAAAACCTTCCA+CGG 0.624106 3_2:+64226180 None:intergenic
ATACAATACCAAGCTGACAA+TGG 0.630738 3_2:-64223527 Msa0417140:CDS
TTGAAATTTCATTGCAACCG+TGG 0.633557 3_2:-64226197 Msa0417140:CDS
TTCAACCACATACGACGCCA+GGG 0.634894 3_2:+64224273 None:intergenic
GCGTCGTATGTGGTTGAAGG+CGG 0.638298 3_2:-64224268 Msa0417140:CDS
TCAGCTATGTTACGGTACAC+GGG 0.640206 3_2:+64227411 None:intergenic
ATTGAGCAAAAGAGGTTCTG+TGG 0.641274 3_2:+64226986 None:intergenic
CCGTGAGAAAGGCTGGTAGA+GGG 0.642675 3_2:-64223178 Msa0417140:CDS
ATGGGTAAAAGGGTGTGGTG+TGG 0.645380 3_2:+64227247 None:intergenic
AGGCCAAGTTGATCAAGTGA+GGG 0.645695 3_2:-64225920 Msa0417140:CDS
AGTGAGGGAGTTTATTCCCG+AGG 0.654388 3_2:-64225905 Msa0417140:CDS
CATATCCTGAACCTTGGTCA+CGG 0.656692 3_2:-64223152 Msa0417140:CDS
TGGACGGTTGATATGGCTGA+CGG 0.660456 3_2:-64223299 Msa0417140:CDS
GGCTTATGAGACAAGCTGGG+AGG 0.683527 3_2:-64226926 Msa0417140:CDS
GAGAATAGCATTGACCGGTG+TGG 0.684858 3_2:-64223339 Msa0417140:CDS
ACGGAGCACCCACAAAACCA+AGG 0.689374 3_2:+64224299 None:intergenic
TACACGGGCGAAGTATGGGA+AGG 0.689762 3_2:+64227426 None:intergenic
GAGGAATCAGTTCCATACGT+TGG 0.710365 3_2:-64225886 Msa0417140:CDS
CATCGTAGTAGGTACTCCTG+AGG 0.717142 3_2:-64223129 Msa0417140:CDS
CAAGCTTACAACATCCACAC+CGG 0.721621 3_2:+64223325 None:intergenic
TGTCTCATAAGCCAAACAGG+AGG 0.741224 3_2:+64226936 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTTCTATTTATTTTTT+TGG - chr3_2:64225495-64225514 Msa0417140:intron 10.0%
!! AATAAAATTGATTATTTCAA+GGG + chr3_2:64226328-64226347 None:intergenic 10.0%
!! AAATAAAATTGATTATTTCA+AGG + chr3_2:64226329-64226348 None:intergenic 10.0%
!!! TTTTATTTGTTCTTATCTTT+TGG - chr3_2:64225268-64225287 Msa0417140:intron 15.0%
!! GAATTATAAAACAAACAATA+AGG + chr3_2:64225555-64225574 None:intergenic 15.0%
!!! CTTTATTAAATTGAAAGTAT+TGG - chr3_2:64225985-64226004 Msa0417140:CDS 15.0%
!! ATAAAATTGATTATTTCAAG+GGG + chr3_2:64226327-64226346 None:intergenic 15.0%
!! TAAATGTTAATGATAGAAGA+TGG + chr3_2:64223165-64223184 None:intergenic 20.0%
!! AATAAGGTTTACACAATAAT+GGG + chr3_2:64223236-64223255 None:intergenic 20.0%
!! AAATAAGGTTTACACAATAA+TGG + chr3_2:64223237-64223256 None:intergenic 20.0%
!!! TGTAAACCTTATTTAATGAT+GGG - chr3_2:64223243-64223262 Msa0417140:CDS 20.0%
!!! CAAAAGTATAACAAACAATT+AGG + chr3_2:64223455-64223474 None:intergenic 20.0%
!! TATTAAAAAGAAATTGCGTT+TGG - chr3_2:64223760-64223779 Msa0417140:intron 20.0%
!! CTATAAAATAAAAAGAAGTG+CGG + chr3_2:64224548-64224567 None:intergenic 20.0%
!! AGATTTATGAATCATCAATT+TGG - chr3_2:64224784-64224803 Msa0417140:intron 20.0%
!! GATTTGTAAATTGTAATCAA+CGG + chr3_2:64224928-64224947 None:intergenic 20.0%
!!! TCTGTACTTTTTATTTAAAG+TGG + chr3_2:64225178-64225197 None:intergenic 20.0%
!! TGTCAAATAATTAAAAAAGC+AGG - chr3_2:64225426-64225445 Msa0417140:intron 20.0%
!!! TTTCTCTAAAATAAAGAGAT+TGG - chr3_2:64226100-64226119 Msa0417140:intron 20.0%
!! TAATAAAGAAGCAAACAAAT+TGG + chr3_2:64226607-64226626 None:intergenic 20.0%
!!! TTGCAGTTAATATAAGATTT+TGG - chr3_2:64227320-64227339 Msa0417140:exon 20.0%
!! AACATTGAATGGATTTGAAT+GGG + chr3_2:64223107-64223126 None:intergenic 25.0%
! TAATAAATGGAAGTAATACC+TGG + chr3_2:64223135-64223154 None:intergenic 25.0%
! AGGTATTACTTCCATTTATT+AGG - chr3_2:64223134-64223153 Msa0417140:CDS 25.0%
! GGTATTACTTCCATTTATTA+GGG - chr3_2:64223135-64223154 Msa0417140:CDS 25.0%
!! GTGTAAACCTTATTTAATGA+TGG - chr3_2:64223242-64223261 Msa0417140:CDS 25.0%
!! TTGTTATGCATCTGAATTTT+GGG - chr3_2:64223281-64223300 Msa0417140:CDS 25.0%
! TGTGTATTCGTATTAGAATT+TGG - chr3_2:64223485-64223504 Msa0417140:CDS 25.0%
! GTGTATTCGTATTAGAATTT+GGG - chr3_2:64223486-64223505 Msa0417140:CDS 25.0%
!! TCTATTCAAGTACTACATTT+TGG + chr3_2:64223705-64223724 None:intergenic 25.0%
!!! CTGTTGAAAATGTTCTAAAA+TGG + chr3_2:64223881-64223900 None:intergenic 25.0%
! ATTCAGCTCAATTATTTGTT+TGG - chr3_2:64223914-64223933 Msa0417140:intron 25.0%
!! ATTTAGAACAGGATAAGTAT+AGG + chr3_2:64223969-64223988 None:intergenic 25.0%
! ATTCCATTTGACATTGTAAA+AGG - chr3_2:64224354-64224373 Msa0417140:intron 25.0%
! CTAAAAAACATACAGTCTTA+TGG + chr3_2:64224607-64224626 None:intergenic 25.0%
! ACTGAATGATTGTTTAATAG+AGG - chr3_2:64225016-64225035 Msa0417140:intron 25.0%
! AAAAATATAACCAGTTCAGT+TGG + chr3_2:64225132-64225151 None:intergenic 25.0%
!!! GATAAAGTTTTAGTAAGAGA+AGG + chr3_2:64225643-64225662 None:intergenic 25.0%
! AAAACAGACATATTTGATGT+CGG - chr3_2:64225674-64225693 Msa0417140:intron 25.0%
! AAAGAAAAAAGCAAAGCATA+GGG + chr3_2:64225969-64225988 None:intergenic 25.0%
! TAAAGAAAAAAGCAAAGCAT+AGG + chr3_2:64225970-64225989 None:intergenic 25.0%
!!! ATTATTTTGAGAAGCTAGTT+TGG - chr3_2:64226428-64226447 Msa0417140:intron 25.0%
!!! TTATTTTGAGAAGCTAGTTT+GGG - chr3_2:64226429-64226448 Msa0417140:intron 25.0%
!! TATAATTTTGCGTATCACAA+TGG - chr3_2:64226495-64226514 Msa0417140:intron 25.0%
! TCAATTATTTGCTTCAAGTA+TGG + chr3_2:64226905-64226924 None:intergenic 25.0%
! AACTTAGTATTTGATTCCTT+TGG + chr3_2:64227257-64227276 None:intergenic 25.0%
! AAATGTCGTTCTATATTTAG+AGG + chr3_2:64227447-64227466 None:intergenic 25.0%
! TTGAATTCAACCATGTTTTG+CGG - chr3_2:64223018-64223037 Msa0417140:three_prime_UTR 30.0%
ATGGATTTGAATGGGTAAAA+GGG + chr3_2:64223099-64223118 None:intergenic 30.0%
! AATGGATTTGAATGGGTAAA+AGG + chr3_2:64223100-64223119 None:intergenic 30.0%
! GAACATTGAATGGATTTGAA+TGG + chr3_2:64223108-64223127 None:intergenic 30.0%
AGATGGAAAACCCTAATAAA+TGG + chr3_2:64223148-64223167 None:intergenic 30.0%
CACAAACCCATCATTAAATA+AGG + chr3_2:64223252-64223271 None:intergenic 30.0%
! GTTGTTATGCATCTGAATTT+TGG - chr3_2:64223280-64223299 Msa0417140:CDS 30.0%
!! AATTTTGGGAATTTATGTGC+AGG - chr3_2:64223295-64223314 Msa0417140:CDS 30.0%
ATTCGTATTAGAATTTGGGT+TGG - chr3_2:64223490-64223509 Msa0417140:CDS 30.0%
! TTCGTATTAGAATTTGGGTT+GGG - chr3_2:64223491-64223510 Msa0417140:CDS 30.0%
CCTGACAATGTGTTTATAAT+TGG + chr3_2:64223555-64223574 None:intergenic 30.0%
CCAATTATAAACACATTGTC+AGG - chr3_2:64223552-64223571 Msa0417140:CDS 30.0%
GAACATCCAAATTTAGTGAT+TGG - chr3_2:64223614-64223633 Msa0417140:intron 30.0%
CAAACACCAATCACTAAATT+TGG + chr3_2:64223623-64223642 None:intergenic 30.0%
ACTCTGTTTAACATATGCAA+TGG - chr3_2:64223724-64223743 Msa0417140:intron 30.0%
CTCTGTTTAACATATGCAAT+GGG - chr3_2:64223725-64223744 Msa0417140:intron 30.0%
ACTTTGTGTGAAACTAAGAT+TGG - chr3_2:64223820-64223839 Msa0417140:intron 30.0%
AAAACCAATTTGACGTTTAG+TGG + chr3_2:64223993-64224012 None:intergenic 30.0%
!! CTTCTTGAATAAGCTTTGAA+AGG - chr3_2:64224016-64224035 Msa0417140:intron 30.0%
! TTGCCTTTTACAATGTCAAA+TGG + chr3_2:64224360-64224379 None:intergenic 30.0%
ATTTGACATTGTAAAAGGCA+AGG - chr3_2:64224359-64224378 Msa0417140:intron 30.0%
TTTGACATTGTAAAAGGCAA+GGG - chr3_2:64224360-64224379 Msa0417140:intron 30.0%
ATGATAAAACAGGGATACAA+AGG + chr3_2:64224520-64224539 None:intergenic 30.0%
! CTATATGGTTTAGTTCAGTT+CGG + chr3_2:64224898-64224917 None:intergenic 30.0%
GTAAATTGTAATCAACGGTT+CGG + chr3_2:64224923-64224942 None:intergenic 30.0%
! ATGTTTTGTAGACAGTTAAC+CGG - chr3_2:64224954-64224973 Msa0417140:intron 30.0%
ATTAAAATGTCCAACTGAAC+TGG - chr3_2:64225119-64225138 Msa0417140:intron 30.0%
TGGCAGAAACACAAATTTAA+TGG + chr3_2:64225577-64225596 None:intergenic 30.0%
AACATATCCACTAAGTTACT+TGG + chr3_2:64225597-64225616 None:intergenic 30.0%
!! TTCAGTTTTGTGAATCATGT+CGG - chr3_2:64225804-64225823 Msa0417140:intron 30.0%
GATTAGATAATTAGAGTCTC+TGG + chr3_2:64225885-64225904 None:intergenic 30.0%
AAGAAAAAAGCAAAGCATAG+GGG + chr3_2:64225968-64225987 None:intergenic 30.0%
! TCATTGGTTATTGTGTAGAA+AGG + chr3_2:64226260-64226279 None:intergenic 30.0%
TAACCAATGAGTTCTTAAAC+TGG - chr3_2:64226270-64226289 Msa0417140:intron 30.0%
ACATTTGGAAAAGCTTACAA+TGG - chr3_2:64226525-64226544 Msa0417140:intron 30.0%
! ATGGACAGCTTTTTAATCAT+AGG + chr3_2:64226570-64226589 None:intergenic 30.0%
ATTGGTAAGCATGAATCATA+TGG + chr3_2:64226589-64226608 None:intergenic 30.0%
GCAAAAGTTTACAACATCAA+TGG - chr3_2:64226775-64226794 Msa0417140:intron 30.0%
TGTACAGATATTCGATTCAT+GGG - chr3_2:64226838-64226857 Msa0417140:intron 30.0%
!!! GAATGTAGCACATTTTTTTG+AGG - chr3_2:64227228-64227247 Msa0417140:CDS 30.0%
GTTGAGTTTCAGCTATGTTA+CGG + chr3_2:64222933-64222952 None:intergenic 35.0%
! TTCAGACAAACGCAGATTTT+GGG + chr3_2:64222987-64223006 None:intergenic 35.0%
! TTTCAGACAAACGCAGATTT+TGG + chr3_2:64222988-64223007 None:intergenic 35.0%
!!! GTGTTGTTTTCTGGGTAAAA+TGG + chr3_2:64223067-64223086 None:intergenic 35.0%
!!! ATGATGGGTTTGTGTTGTTT+TGG - chr3_2:64223258-64223277 Msa0417140:CDS 35.0%
!! TCTGTGGCATTAGTTGTTTT+AGG + chr3_2:64223334-64223353 None:intergenic 35.0%
TTGTCAGGTCATATGTCATT+TGG - chr3_2:64223567-64223586 Msa0417140:CDS 35.0%
! TGTCAGGTCATATGTCATTT+GGG - chr3_2:64223568-64223587 Msa0417140:CDS 35.0%
GGATTGTCACATTCTTTGTA+TGG - chr3_2:64223935-64223954 Msa0417140:intron 35.0%
GTCACATTCTTTGTATGGTT+TGG - chr3_2:64223940-64223959 Msa0417140:intron 35.0%
AATGCCACTAAACGTCAAAT+TGG - chr3_2:64223986-64224005 Msa0417140:intron 35.0%
! GGTATTTTTCGCAGATGATT+TGG + chr3_2:64224077-64224096 None:intergenic 35.0%
ATCTGAAAACGTTGATCTTG+TGG - chr3_2:64224113-64224132 Msa0417140:intron 35.0%
TTGAAATTTCATTGCAACCG+TGG - chr3_2:64224136-64224155 Msa0417140:intron 35.0%
!! TGTTGTGGTTCTGATTATGT+TGG - chr3_2:64224251-64224270 Msa0417140:CDS 35.0%
GATATTCTTACACCACTTTC+TGG - chr3_2:64224324-64224343 Msa0417140:intron 35.0%
GGAATATTCATTCCAGAAAG+TGG + chr3_2:64224339-64224358 None:intergenic 35.0%
! ACTATCAATTTTGCGCAAAG+AGG - chr3_2:64224476-64224495 Msa0417140:intron 35.0%
TGGAATTTGACTAAACAGAC+AGG + chr3_2:64224587-64224606 None:intergenic 35.0%
TGATTGCGAATCATAGATAG+AGG - chr3_2:64224669-64224688 Msa0417140:intron 35.0%
GATTGCGAATCATAGATAGA+GGG - chr3_2:64224670-64224689 Msa0417140:intron 35.0%
ATTGCGAATCATAGATAGAG+GGG - chr3_2:64224671-64224690 Msa0417140:intron 35.0%
! CATATTATCTTGATAGCCAC+TGG + chr3_2:64224753-64224772 None:intergenic 35.0%
! TGTTTTGTAGACAGTTAACC+GGG - chr3_2:64224955-64224974 Msa0417140:intron 35.0%
AACTCTTCAAAATTTCAGCC+CGG + chr3_2:64224976-64224995 None:intergenic 35.0%
! AGAGAGCTTCGTTTCATTTT+AGG - chr3_2:64225074-64225093 Msa0417140:intron 35.0%
!!! TTCGTTTCATTTTAGGACAG+TGG - chr3_2:64225081-64225100 Msa0417140:intron 35.0%
!!! TCGTTTCATTTTAGGACAGT+GGG - chr3_2:64225082-64225101 Msa0417140:intron 35.0%
AAACCATTTCAAGACAGAGA+AGG - chr3_2:64225395-64225414 Msa0417140:intron 35.0%
TTTCCTTCTCTGTCTTGAAA+TGG + chr3_2:64225401-64225420 None:intergenic 35.0%
GTATGTGCAATAAAGAGAGA+AGG + chr3_2:64225533-64225552 None:intergenic 35.0%
TGTGGAAATTCAACACAGTT+TGG - chr3_2:64225707-64225726 Msa0417140:intron 35.0%
GTGGAAATTCAACACAGTTT+GGG - chr3_2:64225708-64225727 Msa0417140:intron 35.0%
TCAAAACTGAACTACTCTAC+TGG + chr3_2:64225763-64225782 None:intergenic 35.0%
TTCACAAAACTGAATCGAAC+TGG + chr3_2:64225798-64225817 None:intergenic 35.0%
AGATAATTAGAGTCTCTGGT+GGG + chr3_2:64225881-64225900 None:intergenic 35.0%
TAGATAATTAGAGTCTCTGG+TGG + chr3_2:64225882-64225901 None:intergenic 35.0%
!! AAATTGAAAGTATTGGTCGC+AGG - chr3_2:64225992-64226011 Msa0417140:CDS 35.0%
GATAATAAATCTGCAGTCCT+TGG - chr3_2:64226017-64226036 Msa0417140:CDS 35.0%
AGGTGGTTAAAGATTACCTT+TGG + chr3_2:64226137-64226156 None:intergenic 35.0%
TTATTCAGCAGTTCAAAACC+TGG - chr3_2:64226225-64226244 Msa0417140:CDS 35.0%
TGACCAGTTTAAGAACTCAT+TGG + chr3_2:64226276-64226295 None:intergenic 35.0%
CTTAAACTGGTCATTTAGAG+CGG - chr3_2:64226283-64226302 Msa0417140:intron 35.0%
AAGCTTACAATGGAAAAGCT+TGG - chr3_2:64226535-64226554 Msa0417140:intron 35.0%
TATGCATTCAACTTTCAGAG+TGG - chr3_2:64226663-64226682 Msa0417140:intron 35.0%
ATACAATACCAAGCTGACAA+TGG - chr3_2:64226806-64226825 Msa0417140:intron 35.0%
CTGTACAGATATTCGATTCA+TGG - chr3_2:64226837-64226856 Msa0417140:intron 35.0%
TTACCTTGGATAGCTACATT+TGG + chr3_2:64227076-64227095 None:intergenic 35.0%
!!! CATTTTTTTGAGGTTGCCAA+AGG - chr3_2:64227238-64227257 Msa0417140:CDS 35.0%
TTCAGCTATGTTACGGTACA+CGG + chr3_2:64222926-64222945 None:intergenic 40.0%
TTTGAATGGGTAAAAGGGTG+TGG + chr3_2:64223094-64223113 None:intergenic 40.0%
TCCATTCAATGTTCTCTTCC+AGG - chr3_2:64223114-64223133 Msa0417140:CDS 40.0%
ACCTGGAAGAGAACATTGAA+TGG + chr3_2:64223118-64223137 None:intergenic 40.0%
ATTGAGCAAAAGAGGTTCTG+TGG + chr3_2:64223350-64223369 None:intergenic 40.0%
! CTCTTTTGCTCAATGCAGTT+CGG - chr3_2:64223356-64223375 Msa0417140:CDS 40.0%
! TCTTTTGCTCAATGCAGTTC+GGG - chr3_2:64223357-64223376 Msa0417140:CDS 40.0%
! TTTGGCTTATGAGACAAGCT+GGG - chr3_2:64223404-64223423 Msa0417140:CDS 40.0%
TGTGTGAAACTAAGATTGGC+TGG - chr3_2:64223824-64223843 Msa0417140:intron 40.0%
! CGTTTAGTGGCATTTAGAAC+AGG + chr3_2:64223980-64223999 None:intergenic 40.0%
! CAACGTTTTCAGATCTTTCC+CGG + chr3_2:64224107-64224126 None:intergenic 40.0%
AATTTCATTGCAACCGTGGA+AGG - chr3_2:64224140-64224159 Msa0417140:intron 40.0%
GAGAGTTATATTACCCCATC+AGG + chr3_2:64224174-64224193 None:intergenic 40.0%
TTACCCTACTTCTTGTGTTG+TGG - chr3_2:64224236-64224255 Msa0417140:CDS 40.0%
GAACCACAACACAAGAAGTA+GGG + chr3_2:64224242-64224261 None:intergenic 40.0%
AGAACCACAACACAAGAAGT+AGG + chr3_2:64224243-64224262 None:intergenic 40.0%
!! CTCGATACTGATTCTGTAAC+AGG - chr3_2:64224287-64224306 Msa0417140:CDS 40.0%
TGAACTGGGTCAAATATGAC+GGG + chr3_2:64224387-64224406 None:intergenic 40.0%
GTGAACTGGGTCAAATATGA+CGG + chr3_2:64224388-64224407 None:intergenic 40.0%
! AACGTATGGAACTGATTCCT+CGG + chr3_2:64224448-64224467 None:intergenic 40.0%
! ATTTTGCGCAAAGAGGTTTG+AGG - chr3_2:64224483-64224502 Msa0417140:intron 40.0%
GGGTGTAATGACATTAAGTG+AGG - chr3_2:64224691-64224710 Msa0417140:intron 40.0%
CGTCTTAAATAGTAGCTACC+TGG - chr3_2:64224842-64224861 Msa0417140:intron 40.0%
!! ATCAACGGTTCGGTTCTATA+TGG + chr3_2:64224913-64224932 None:intergenic 40.0%
GTTTAATAGAGGAAAGCTGC+TGG - chr3_2:64225027-64225046 Msa0417140:intron 40.0%
!!! TTTCATTTTAGGACAGTGGG+AGG - chr3_2:64225085-64225104 Msa0417140:intron 40.0%
AAAAAGCAGGAAACGTGAAG+TGG - chr3_2:64225439-64225458 Msa0417140:intron 40.0%
GTTTCTGCCAAGTAACTTAG+TGG - chr3_2:64225587-64225606 Msa0417140:intron 40.0%
! AGGCATTGTTTGAGTCACTA+AGG + chr3_2:64225623-64225642 None:intergenic 40.0%
! ACTGAACTACTCTACTGGTT+TGG + chr3_2:64225758-64225777 None:intergenic 40.0%
ATTGGCATTCTCTGAACCAA+AGG - chr3_2:64226118-64226137 Msa0417140:intron 40.0%
AAGCACATCCTAAGTTCACA+TGG + chr3_2:64226196-64226215 None:intergenic 40.0%
GTAGAAAGGTAAAACATGCC+AGG + chr3_2:64226246-64226265 None:intergenic 40.0%
CACAATGGAGCTGTTACATT+TGG - chr3_2:64226510-64226529 Msa0417140:intron 40.0%
! ACTTTTGCAGTAACGAGTGA+AGG + chr3_2:64226763-64226782 None:intergenic 40.0%
CTGAATCGTTCAAAATCCAC+TGG + chr3_2:64226878-64226897 None:intergenic 40.0%
CACTTGCATAGAGGATAAGA+GGG + chr3_2:64226955-64226974 None:intergenic 40.0%
!! CTTGAGAGAATAGCATTGAC+CGG - chr3_2:64226989-64227008 Msa0417140:CDS 40.0%
TGGATGTTGTAAGCTTGGAT+TGG - chr3_2:64227014-64227033 Msa0417140:CDS 40.0%
! TGTTGTAAGCTTGGATTGGA+CGG - chr3_2:64227018-64227037 Msa0417140:CDS 40.0%
ATCCAAGGTAATGTTGATCC+TGG - chr3_2:64227085-64227104 Msa0417140:intron 40.0%
CGAAAGAGCTGATTACTGAT+AGG - chr3_2:64227122-64227141 Msa0417140:intron 40.0%
AAATGTGCTACATTCTCCTC+AGG + chr3_2:64227223-64227242 None:intergenic 40.0%
GCGAAGTATGGGAAGGATAA+GGG + chr3_2:64222903-64222922 None:intergenic 45.0%
TCAGCTATGTTACGGTACAC+GGG + chr3_2:64222925-64222944 None:intergenic 45.0%
! CAAACGCAGATTTTGGGCTT+TGG + chr3_2:64222981-64223000 None:intergenic 45.0%
GCTAACTACACCGCAAAACA+TGG + chr3_2:64223031-64223050 None:intergenic 45.0%
!!! GTGGTGTGGTGTTGTTTTCT+GGG + chr3_2:64223075-64223094 None:intergenic 45.0%
!!! TGTGGTGTGGTGTTGTTTTC+TGG + chr3_2:64223076-64223095 None:intergenic 45.0%
CGAACTGCATTGAGCAAAAG+AGG + chr3_2:64223358-64223377 None:intergenic 45.0%
! CTTTTGCTCAATGCAGTTCG+GGG - chr3_2:64223358-64223377 Msa0417140:CDS 45.0%
ATGTCGAAAGACCTCCTGTT+TGG - chr3_2:64223386-64223405 Msa0417140:CDS 45.0%
TGTCTCATAAGCCAAACAGG+AGG + chr3_2:64223400-64223419 None:intergenic 45.0%
GCTTGTCTCATAAGCCAAAC+AGG + chr3_2:64223403-64223422 None:intergenic 45.0%
! GTTTGGCTTATGAGACAAGC+TGG - chr3_2:64223403-64223422 Msa0417140:CDS 45.0%
!! CGCAGATGATTTGGTAACTC+TGG + chr3_2:64224068-64224087 None:intergenic 45.0%
GCGAAAAATACCCGTCATTC+CGG - chr3_2:64224085-64224104 Msa0417140:intron 45.0%
CGAAAAATACCCGTCATTCC+GGG - chr3_2:64224086-64224105 Msa0417140:intron 45.0%
TCAGATCTTTCCCGGAATGA+CGG + chr3_2:64224099-64224118 None:intergenic 45.0%
GTTATATTACCCCATCAGGC+TGG + chr3_2:64224170-64224189 None:intergenic 45.0%
!! AGGCCAAGTTGATCAAGTGA+GGG - chr3_2:64224413-64224432 Msa0417140:intron 45.0%
ACTCCCTCACTTGATCAACT+TGG + chr3_2:64224419-64224438 None:intergenic 45.0%
! ACGTATGGAACTGATTCCTC+GGG + chr3_2:64224447-64224466 None:intergenic 45.0%
GAGGAATCAGTTCCATACGT+TGG - chr3_2:64224447-64224466 Msa0417140:intron 45.0%
GATAGTGCTTCACCAACGTA+TGG + chr3_2:64224462-64224481 None:intergenic 45.0%
CAGGGATACAAAGGTAGTGT+AGG + chr3_2:64224511-64224530 None:intergenic 45.0%
GCGGCTGAGATGATAAAACA+GGG + chr3_2:64224529-64224548 None:intergenic 45.0%
TGCGGCTGAGATGATAAAAC+AGG + chr3_2:64224530-64224549 None:intergenic 45.0%
! TTATCTTGATAGCCACTGGC+AGG + chr3_2:64224749-64224768 None:intergenic 45.0%
ATAGTAGCTACCTGGAGACT+AGG - chr3_2:64224850-64224869 Msa0417140:intron 45.0%
TTCAGTTCGGTTCTGCAGTT+CGG + chr3_2:64224885-64224904 None:intergenic 45.0%
TAGAAGTGATACGACCTTGC+AGG - chr3_2:64225231-64225250 Msa0417140:intron 45.0%
GTTTCATAGCCAATCCTGCA+AGG + chr3_2:64225248-64225267 None:intergenic 45.0%
! GTGAAGTGGTCTAAAGCATG+AGG - chr3_2:64225453-64225472 Msa0417140:intron 45.0%
GTCGGCAGTTCAGTTTAGTT+CGG - chr3_2:64225822-64225841 Msa0417140:intron 45.0%
! CAGTTCAGTTTAGTTCGGTG+TGG - chr3_2:64225827-64225846 Msa0417140:intron 45.0%
! CTGGTGGGCAGTTTAAACTT+CGG + chr3_2:64225866-64225885 None:intergenic 45.0%
!!! ATCTGCAGTCCTTGGTTTTG+TGG - chr3_2:64226025-64226044 Msa0417140:CDS 45.0%
!!! TCTGCAGTCCTTGGTTTTGT+GGG - chr3_2:64226026-64226045 Msa0417140:CDS 45.0%
ACTTACGAGATAGACGAAGG+TGG + chr3_2:64226154-64226173 None:intergenic 45.0%
CCTACTTACGAGATAGACGA+AGG + chr3_2:64226157-64226176 None:intergenic 45.0%
CCTTCGTCTATCTCGTAAGT+AGG - chr3_2:64226154-64226173 Msa0417140:intron 45.0%
GCTTGTCTCCATGTGAACTT+AGG - chr3_2:64226185-64226204 Msa0417140:CDS 45.0%
AGTAACGAGTGAAGGATCTG+TGG + chr3_2:64226755-64226774 None:intergenic 45.0%
TAGAGGATAAGAGGGAGTTC+TGG + chr3_2:64226947-64226966 None:intergenic 45.0%
CCACTTGCATAGAGGATAAG+AGG + chr3_2:64226956-64226975 None:intergenic 45.0%
CCTCTTATCCTCTATGCAAG+TGG - chr3_2:64226953-64226972 Msa0417140:CDS 45.0%
ATCCTCTATGCAAGTGGATC+AGG - chr3_2:64226959-64226978 Msa0417140:CDS 45.0%
CAAGCTTACAACATCCACAC+CGG + chr3_2:64227011-64227030 None:intergenic 45.0%
! CTTGGATTGGACGGTTGATA+TGG - chr3_2:64227027-64227046 Msa0417140:intron 45.0%
TTGATATGGCTGACGGTAGA+AGG - chr3_2:64227041-64227060 Msa0417140:intron 45.0%
GGACCAAATGTAGCTATCCA+AGG - chr3_2:64227070-64227089 Msa0417140:intron 45.0%
CACCAGGATCAACATTACCT+TGG + chr3_2:64227090-64227109 None:intergenic 45.0%
GTTGATCCTGGTGTTCTGTT+TGG - chr3_2:64227097-64227116 Msa0417140:intron 45.0%
TTCGATCCAAACAGAACACC+AGG + chr3_2:64227106-64227125 None:intergenic 45.0%
GATACACGATACCGTGAGAA+AGG - chr3_2:64227144-64227163 Msa0417140:intron 45.0%
GGGAAACATATCCTGAACCT+TGG - chr3_2:64227175-64227194 Msa0417140:intron 45.0%
CATATCCTGAACCTTGGTCA+CGG - chr3_2:64227181-64227200 Msa0417140:intron 45.0%
!!! TTTTTTTTTTAAATTTAATC+TGG - chr3_2:64223210-64223229 Msa0417140:CDS 5.0%
GGCGAAGTATGGGAAGGATA+AGG + chr3_2:64222904-64222923 None:intergenic 50.0%
! ATGGGTAAAAGGGTGTGGTG+TGG + chr3_2:64223089-64223108 None:intergenic 50.0%
! ACAAGCTGGGAGGTACATGA+AGG - chr3_2:64223417-64223436 Msa0417140:CDS 50.0%
TACAAGCCGGAGGTTTAGTC+AGG + chr3_2:64223517-64223536 None:intergenic 50.0%
! GACTAAACCTCCGGCTTGTA+AGG - chr3_2:64223517-64223536 Msa0417140:CDS 50.0%
! TAAACCTCCGGCTTGTAAGG+TGG - chr3_2:64223520-64223539 Msa0417140:CDS 50.0%
! AAACCTCCGGCTTGTAAGGT+GGG - chr3_2:64223521-64223540 Msa0417140:CDS 50.0%
CAGATCTTTCCCGGAATGAC+GGG + chr3_2:64224098-64224117 None:intergenic 50.0%
TCAGGCTGGAAAACCTTCCA+CGG + chr3_2:64224156-64224175 None:intergenic 50.0%
! TGGAAGGTTTTCCAGCCTGA+TGG - chr3_2:64224156-64224175 Msa0417140:intron 50.0%
! GGAAGGTTTTCCAGCCTGAT+GGG - chr3_2:64224157-64224176 Msa0417140:intron 50.0%
! GAAGGTTTTCCAGCCTGATG+GGG - chr3_2:64224158-64224177 Msa0417140:intron 50.0%
CACTTGATCAACTTGGCCTG+CGG + chr3_2:64224412-64224431 None:intergenic 50.0%
!! CAGGCCAAGTTGATCAAGTG+AGG - chr3_2:64224412-64224431 Msa0417140:intron 50.0%
AGTGAGGGAGTTTATTCCCG+AGG - chr3_2:64224428-64224447 Msa0417140:intron 50.0%
GTTGAACAGTCCTAGTCTCC+AGG + chr3_2:64224863-64224882 None:intergenic 50.0%
GTGATACGACCTTGCAGGAT+TGG - chr3_2:64225236-64225255 Msa0417140:intron 50.0%
GATGTCGGTGCACAGTTATG+TGG - chr3_2:64225689-64225708 Msa0417140:intron 50.0%
GGGTTTGAACCAGTAGAGCA+TGG - chr3_2:64225728-64225747 Msa0417140:intron 50.0%
! TTTGGTGCACCATGCTCTAC+TGG + chr3_2:64225740-64225759 None:intergenic 50.0%
ACATACGACGCCAGGGTAAA+CGG + chr3_2:64226056-64226075 None:intergenic 50.0%
TTCAACCACATACGACGCCA+GGG + chr3_2:64226063-64226082 None:intergenic 50.0%
!! GGATAAGAGGGAGTTCTGGA+TGG + chr3_2:64226943-64226962 None:intergenic 50.0%
CTCCTGATCCACTTGCATAG+AGG + chr3_2:64226964-64226983 None:intergenic 50.0%
CTCTATGCAAGTGGATCAGG+AGG - chr3_2:64226962-64226981 Msa0417140:CDS 50.0%
!! GAGAATAGCATTGACCGGTG+TGG - chr3_2:64226994-64227013 Msa0417140:CDS 50.0%
CGGTGTGGATGTTGTAAGCT+TGG - chr3_2:64227009-64227028 Msa0417140:CDS 50.0%
! TGGACGGTTGATATGGCTGA+CGG - chr3_2:64227034-64227053 Msa0417140:intron 50.0%
GCTGACGGTAGAAGGAGATT+GGG - chr3_2:64227049-64227068 Msa0417140:intron 50.0%
CATCGTAGTAGGTACTCCTG+AGG - chr3_2:64227204-64227223 Msa0417140:intron 50.0%
TACACGGGCGAAGTATGGGA+AGG + chr3_2:64222910-64222929 None:intergenic 55.0%
ACGGTACACGGGCGAAGTAT+GGG + chr3_2:64222914-64222933 None:intergenic 55.0%
TACGGTACACGGGCGAAGTA+TGG + chr3_2:64222915-64222934 None:intergenic 55.0%
GGCTTATGAGACAAGCTGGG+AGG - chr3_2:64223407-64223426 Msa0417140:CDS 55.0%
GTTGGGCCTGACTAAACCTC+CGG - chr3_2:64223508-64223527 Msa0417140:CDS 55.0%
! AACCTCCGGCTTGTAAGGTG+GGG - chr3_2:64223522-64223541 Msa0417140:CDS 55.0%
TTTGACCCAGTTCACTCCGC+AGG - chr3_2:64224393-64224412 Msa0417140:intron 55.0%
AACACTGTCTGTCCTGCCAG+TGG - chr3_2:64224734-64224753 Msa0417140:intron 55.0%
TAGGACAGTGGGAGGACGAA+AGG - chr3_2:64225093-64225112 Msa0417140:intron 55.0%
! ACGGAGCACCCACAAAACCA+AGG + chr3_2:64226037-64226056 None:intergenic 55.0%
GTTTACCCTGGCGTCGTATG+TGG - chr3_2:64226055-64226074 Msa0417140:intron 55.0%
CTTCAACCACATACGACGCC+AGG + chr3_2:64226064-64226083 None:intergenic 55.0%
CTGGCGTCGTATGTGGTTGA+AGG - chr3_2:64226062-64226081 Msa0417140:intron 55.0%
GCGTCGTATGTGGTTGAAGG+CGG - chr3_2:64226065-64226084 Msa0417140:intron 55.0%
CTTGCGCTCCATTGTCAGCT+TGG + chr3_2:64226817-64226836 None:intergenic 55.0%
GGCAACAGAGCTTAGTCCAG+TGG - chr3_2:64226859-64226878 Msa0417140:intron 55.0%
GGCTGACGGTAGAAGGAGAT+TGG - chr3_2:64227048-64227067 Msa0417140:intron 55.0%
CACGATACCGTGAGAAAGGC+TGG - chr3_2:64227148-64227167 Msa0417140:intron 55.0%
ACCGTGAGAAAGGCTGGTAG+AGG - chr3_2:64227154-64227173 Msa0417140:intron 55.0%
CCCTCTACCAGCCTTTCTCA+CGG + chr3_2:64227158-64227177 None:intergenic 55.0%
CCGTGAGAAAGGCTGGTAGA+GGG - chr3_2:64227155-64227174 Msa0417140:intron 55.0%
CTACTACGATGCCGTGACCA+AGG + chr3_2:64227195-64227214 None:intergenic 55.0%
CTTGGTCACGGCATCGTAGT+AGG - chr3_2:64227193-64227212 Msa0417140:intron 55.0%
! TCCGGCTTGTAAGGTGGGGA+CGG - chr3_2:64223526-64223545 Msa0417140:CDS 60.0%
ACCGTCCCCACCTTACAAGC+CGG + chr3_2:64223530-64223549 None:intergenic 60.0%
CTTGGCCTGCGGAGTGAACT+GGG + chr3_2:64224401-64224420 None:intergenic 60.0%
ACTTGGCCTGCGGAGTGAAC+TGG + chr3_2:64224402-64224421 None:intergenic 60.0%
GACAGTGGGAGGACGAAAGG+AGG - chr3_2:64225096-64225115 Msa0417140:intron 60.0%
TGTGGGTGCTCCGTTTACCC+TGG - chr3_2:64226043-64226062 Msa0417140:intron 60.0%
CGATGCCGTGACCAAGGTTC+AGG + chr3_2:64227189-64227208 None:intergenic 60.0%
GTCCCCACCTTACAAGCCGG+AGG + chr3_2:64223527-64223546 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 64222877 64227478 64222877 ID=Msa0417140;Name=Msa0417140
chr3_2 mRNA 64222877 64227478 64222877 ID=Msa0417140-mRNA-1;Parent=Msa0417140;Name=Msa0417140-mRNA-1;_AED=0.08;_eAED=0.08;_QI=153|1|1|1|1|1|6|205|389
chr3_2 exon 64222877 64223597 64222877 ID=Msa0417140-mRNA-1:exon:14200;Parent=Msa0417140-mRNA-1
chr3_2 exon 64224216 64224341 64224216 ID=Msa0417140-mRNA-1:exon:14199;Parent=Msa0417140-mRNA-1
chr3_2 exon 64225858 64226046 64225858 ID=Msa0417140-mRNA-1:exon:14198;Parent=Msa0417140-mRNA-1
chr3_2 exon 64226176 64226286 64226176 ID=Msa0417140-mRNA-1:exon:14197;Parent=Msa0417140-mRNA-1
chr3_2 exon 64226917 64227038 64226917 ID=Msa0417140-mRNA-1:exon:14196;Parent=Msa0417140-mRNA-1
chr3_2 exon 64227220 64227478 64227220 ID=Msa0417140-mRNA-1:exon:14195;Parent=Msa0417140-mRNA-1
chr3_2 five_prime_UTR 64227326 64227478 64227326 ID=Msa0417140-mRNA-1:five_prime_utr;Parent=Msa0417140-mRNA-1
chr3_2 CDS 64227220 64227325 64227220 ID=Msa0417140-mRNA-1:cds;Parent=Msa0417140-mRNA-1
chr3_2 CDS 64226917 64227038 64226917 ID=Msa0417140-mRNA-1:cds;Parent=Msa0417140-mRNA-1
chr3_2 CDS 64226176 64226286 64226176 ID=Msa0417140-mRNA-1:cds;Parent=Msa0417140-mRNA-1
chr3_2 CDS 64225858 64226046 64225858 ID=Msa0417140-mRNA-1:cds;Parent=Msa0417140-mRNA-1
chr3_2 CDS 64224216 64224341 64224216 ID=Msa0417140-mRNA-1:cds;Parent=Msa0417140-mRNA-1
chr3_2 CDS 64223082 64223597 64223082 ID=Msa0417140-mRNA-1:cds;Parent=Msa0417140-mRNA-1
chr3_2 three_prime_UTR 64222877 64223081 64222877 ID=Msa0417140-mRNA-1:three_prime_utr;Parent=Msa0417140-mRNA-1
Gene Sequence

>Msa0417140

ATGTTTTGCGGTGTAGTTAGCACTTCTTTCACTTCCATTTTACCCAGAAAACAACACCACACCACACCCTTTTACCCATTCAAATCCATTCAATGTTCTCTTCCAGGAGCTGTTGCTGAACCTAAAACAACTAATGCCACAGAACCTCTTTTGCTCAATGCAGTTCGGGGATTAGATGTCGAAAGACCTCCTGTTTGGCTTATGAGACAAGCTGGGAGGTACATGAAGAGTTACCAAATCATCTGCGAAAAATACCCGTCATTCCGGGAAAGATCTGAAAACGTTGATCTTGTGGTTGAAATTTCATTGCAACCGTGGAAGGTTTTCCAGCCTGATGGGGTGATATTATTCTCAGATATTCTTACACCACTTTCTGGAATGAATATTCCATTTGACATTGTAAAAGGCAAGGGTCCCGTCATATTTGACCCAGTTCACTCCGCAGGCCAAGTTGATCAAGTGAGGGAGTTTATTCCCGAGGAATCAGTTCCATACGTTGGTGAAGCACTATCAATTTTGCGCAAAGAGGTAGATAATAAATCTGCAGTCCTTGGTTTTGTGGGTGCTCCGTTTACCCTGGCGTCGTATGTGGTTGAAGGCGGTTCATCAAAACATTTCTCTAAAATAAAGAGATTGGCATTCTCTGAACCAAAGATCCTTCACTCGTTACTGCAAAAGTTTACAACATCAATGGCAAGATACATACAATACCAAGCTGACAATGGAGCGCAAGCTGTACAGATATTCGATTCATGGGCAACAGAGCTTAGTCCAGTGGATTTTGAACGATTCAGTTTGCCATACTTGAAGCAAATAATTGACACTGTAAAGAAAAGCCATCCAGAACTCCCTCTTATCCTCTATGCAAGTGGATCAGGAGGCTTACTTGAGAGAATAGCATTGACCGGTGTGGATGTTGTAAGCTTGGATTGGACGGTTGATATGGCTGACGGTAGAAGGAGATTGGGACCAAATGTAGCTATCCAAGGTAATGTTGATCCTGGTGTTCTGTTTGGATCGAAAGAGCTGATTACTGATAGGATACACGATACCGTGAGAAAGGCTGGTAGAGGGAAACATATCCTGAACCTTGGTCACGGCATCGTAGTAGGTACTCCTGAGGAGAATGTAGCACATTTTTTTGAGGTTGCCAAAGGAATCAAATACTAA

Protein sequence

>Msa0417140

MFCGVVSTSFTSILPRKQHHTTPFYPFKSIQCSLPGAVAEPKTTNATEPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWKVFQPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPVHSAGQVDQVREFIPEESVPYVGEALSILRKEVDNKSAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSEPKILHSLLQKFTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFERFSLPYLKQIIDTVKKSHPELPLILYASGSGGLLERIALTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKELITDRIHDTVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGIKY*