AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0436310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0436310 MtrunA17_Chr3g0133261 98.352 182 3 0 1 182 361 542 3.56e-127 368
Msa0436310 MtrunA17_Chr7g0270811 35.829 187 107 4 3 182 349 529 1.08e-27 108
Msa0436310 MtrunA17_Chr3g0096421 31.892 185 111 4 6 182 142 319 4.43e-21 88.2
Msa0436310 MtrunA17_Chr3g0143331 35.345 116 69 2 19 134 292 401 1.47e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0436310 AT5G52520.1 82.778 180 31 0 3 182 364 543 2.68e-101 302
Msa0436310 AT3G62120.3 35.829 187 107 5 3 182 337 517 3.61e-27 107
Msa0436310 AT3G62120.2 35.829 187 107 5 3 182 350 530 5.04e-27 106
Msa0436310 AT3G62120.1 35.829 187 107 5 3 182 350 530 5.04e-27 106
Msa0436310 AT5G10880.1 33.161 193 111 3 2 182 123 309 9.79e-21 87.4

Find 165 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTAATAATATGATTTA+TGG 0.079203 3_2:-89773304 Msa0436310:three_prime_UTR
CTCTATGGAGCCTTCAATTT+TGG 0.135831 3_2:-89774178 Msa0436310:CDS
CTGGATGGAAATTCAATTTC+TGG 0.137157 3_2:-89774445 Msa0436310:CDS
TTCATCATCCTTCTTCAAAT+TGG 0.216498 3_2:+89774562 None:intergenic
CGCCATTTGGGAAGCCATTC+AGG 0.220881 3_2:-89778917 Msa0436310:intron
CGAGATACAGTCTTCTCTTT+TGG 0.245617 3_2:-89774130 Msa0436310:CDS
TTAGAACTCTTGAATTTCTT+TGG 0.246752 3_2:-89777316 Msa0436310:five_prime_UTR
GGCCTCTGCTGCAGTGGTTT+TGG 0.247674 3_2:+89779098 None:intergenic
ACTTGCTTCTTTCTCTATAA+AGG 0.261830 3_2:+89777807 None:intergenic
CAAAGGCACGGGAAAAGTTT+TGG 0.265297 3_2:+89776980 None:intergenic
ACTTTCGTCCCTTTGCTCTA+AGG 0.265320 3_2:+89773064 None:intergenic
CGAGTTGTCGACTCGGTCTT+TGG 0.269239 3_2:+89779077 None:intergenic
CTTGCAGAGTTAGTAAGATT+TGG 0.279485 3_2:+89773346 None:intergenic
GTCCCTATGGTTACGCCATT+TGG 0.281205 3_2:-89778930 Msa0436310:five_prime_UTR
ATGGACAAAGGGAATATATT+TGG 0.290677 3_2:-89775849 Msa0436310:five_prime_UTR
ACTTAGGCAAAAGTTGTATA+AGG 0.293929 3_2:-89773219 Msa0436310:three_prime_UTR
ACCTGTATCGGTGCAATCTT+TGG 0.300338 3_2:+89775745 None:intergenic
GTTCCTCTTAGAATTGAAAT+TGG 0.310395 3_2:-89774279 Msa0436310:CDS
CGGCGGTGGCGGAGAATGAT+TGG 0.327896 3_2:+89779144 None:intergenic
TTTCTAATAATATGATTTAT+GGG 0.331996 3_2:-89773303 Msa0436310:three_prime_UTR
ATCCCTTGTGGCTGTTCAAA+TGG 0.354235 3_2:+89773419 None:intergenic
GGGCAATTGCATTTCGAGAT+AGG 0.356660 3_2:-89774104 Msa0436310:intron
CAAGGGGCCCTTGGTCTGCT+AGG 0.366722 3_2:-89773616 Msa0436310:intron
AGCTGCCATACCTGTTATTA+CGG 0.369384 3_2:-89777112 Msa0436310:five_prime_UTR
CTTGAATTTCTTTGGCAAGA+AGG 0.374606 3_2:-89777308 Msa0436310:five_prime_UTR
AACACTTTCCCTTGCTTCCC+AGG 0.380427 3_2:+89774207 None:intergenic
GTGCAGTTCACAGATGAAAA+TGG 0.386375 3_2:-89775868 Msa0436310:intron
GGCGGTGGCGGAGAATGATT+GGG 0.387864 3_2:+89779145 None:intergenic
TCTTCCTCTCTTGATTAATC+AGG 0.388403 3_2:-89777479 Msa0436310:intron
TCCCTATGGTTACGCCATTT+GGG 0.391559 3_2:-89778929 Msa0436310:five_prime_UTR
TCCAAAGATTGCACCGATAC+AGG 0.393092 3_2:-89775746 Msa0436310:intron
TTCACAATGGTTTCACTTGT+AGG 0.397403 3_2:+89777538 None:intergenic
GAAAGTGTTTGGAATCTCTA+TGG 0.397700 3_2:-89774193 Msa0436310:CDS
AGGAAACTGGAGCAACTATC+AGG 0.398901 3_2:-89773448 Msa0436310:CDS
CTGCAATATCACAAGGCAAA+TGG 0.399141 3_2:-89773640 Msa0436310:CDS
CAATCTTTGGAGGAAGCATT+AGG 0.399281 3_2:+89775758 None:intergenic
AGTTAGCAGTAGTGACAATT+GGG 0.403138 3_2:-89777762 Msa0436310:five_prime_UTR
AGCTTGTTCAAAAGCAAATC+TGG 0.405332 3_2:+89777131 None:intergenic
ATTCAATTTCTGGGAAATGA+AGG 0.410990 3_2:-89774435 Msa0436310:intron
CTTTCGTCCCTTTGCTCTAA+GGG 0.412454 3_2:+89773065 None:intergenic
CGGACCGTAATCTGCTAATT+CGG 0.418329 3_2:+89778975 None:intergenic
GCAAATGGGCAAGGGGCCCT+TGG 0.418567 3_2:-89773625 Msa0436310:CDS
AATATATTTGGCAGACATCA+TGG 0.419041 3_2:-89775837 Msa0436310:five_prime_UTR
GGGAAGCAAGGGAAAGTGTT+TGG 0.420165 3_2:-89774204 Msa0436310:CDS
TTAAAAGTGAAAGAGGAAAC+TGG 0.421097 3_2:-89773461 Msa0436310:CDS
CAGAAATTGAATTTCCATCC+AGG 0.425508 3_2:+89774446 None:intergenic
ATAACCATTGTACCGCGAAC+CGG 0.425988 3_2:+89778955 None:intergenic
TGGATGGAAATTCAATTTCT+GGG 0.428325 3_2:-89774444 Msa0436310:CDS
ACATACACCTCCAAAATTGA+AGG 0.437424 3_2:+89774168 None:intergenic
TGCAATATCACAAGGCAAAT+GGG 0.439132 3_2:-89773639 Msa0436310:CDS
AATTCAAGAGTTCTAACAAA+TGG 0.442257 3_2:+89777323 None:intergenic
GAGTTAGCAGTAGTGACAAT+TGG 0.442737 3_2:-89777763 Msa0436310:five_prime_UTR
TAATAATATGATTTATGGGT+GGG 0.449328 3_2:-89773299 Msa0436310:three_prime_UTR
AATGTCAAGTTCAAGGAGAC+TGG 0.459172 3_2:-89778794 Msa0436310:five_prime_UTR
TCTAAAGTGGAAACATTTGC+TGG 0.460420 3_2:-89777081 Msa0436310:five_prime_UTR
TGAAAGGTTGGTGACGGCGG+TGG 0.462451 3_2:+89779130 None:intergenic
TGGCGGAGAAGGTGAAAGGT+TGG 0.466244 3_2:+89779118 None:intergenic
GTGGAAGTGTGGTGATATCC+AGG 0.467177 3_2:-89774239 Msa0436310:CDS
ATTAAAAGATGTTTGATGAC+AGG 0.474053 3_2:-89773398 Msa0436310:CDS
ACAATGGTTATTCGTCCCTA+TGG 0.476175 3_2:-89778943 Msa0436310:five_prime_UTR
CTAGGAGTGATGACTCGGTC+AGG 0.476493 3_2:+89779042 None:intergenic
TCTTTCTCTATAAAGGAGTA+AGG 0.477392 3_2:+89777814 None:intergenic
AGATGAGTTAAAAGTGAAAG+AGG 0.477450 3_2:-89773468 Msa0436310:CDS
CTTCCCAGGAATATCTCTCC+TGG 0.482230 3_2:+89774221 None:intergenic
CACAGATGAAAATGGACAAA+GGG 0.483190 3_2:-89775860 Msa0436310:five_prime_UTR
AAAGAAGCTCTTCAAAGCTC+TGG 0.483538 3_2:-89774506 Msa0436310:CDS
GCTTGAACCCTTAGAGCAAA+GGG 0.484129 3_2:-89773072 Msa0436310:three_prime_UTR
CACTTCCACTAGACACGTCC+CGG 0.484364 3_2:+89774253 None:intergenic
TTATTTGAATGTCAAGTTCA+AGG 0.486269 3_2:-89778801 Msa0436310:five_prime_UTR
GTCTTTGGCCTCTGCTGCAG+TGG 0.486813 3_2:+89779092 None:intergenic
AAGGTTGGTGACGGCGGTGG+CGG 0.488368 3_2:+89779133 None:intergenic
AACCTGAATGGCTTCCCAAA+TGG 0.497397 3_2:+89778915 None:intergenic
GCAGATTACGGTCCGGTTCG+CGG 0.498963 3_2:-89778967 Msa0436310:five_prime_UTR
GCTGCCATACCTGTTATTAC+GGG 0.500792 3_2:-89777111 Msa0436310:five_prime_UTR
TGAGAAATTGCTGTTGTTGA+GGG 0.506381 3_2:+89779174 None:intergenic
GGACCAATTTCAATTCTAAG+AGG 0.507990 3_2:+89774276 None:intergenic
CTACACGATTGAGGCAATGA+TGG 0.509021 3_2:-89777046 Msa0436310:five_prime_UTR
GAGGAAGATCACGGTAGCTA+TGG 0.509612 3_2:+89777494 None:intergenic
GACTCAGATCAAAGAACCCC+TGG 0.510899 3_2:-89774464 Msa0436310:CDS
AAAGAAGCAAGTCATGTTGA+GGG 0.511967 3_2:-89777796 Msa0436310:five_prime_UTR
CGCCAAAACCACTGCAGCAG+AGG 0.513327 3_2:-89779100 Msa0436310:five_prime_UTR
AAAATAGCCACTTCTTCAGC+AGG 0.513654 3_2:+89773371 None:intergenic
CTTAGGCAAAAGTTGTATAA+GGG 0.514326 3_2:-89773218 Msa0436310:three_prime_UTR
AGAGATATTCCTGGGAAGCA+AGG 0.516068 3_2:-89774216 Msa0436310:CDS
GGTGTATGTTAAAGACAAGT+TGG 0.524044 3_2:-89774154 Msa0436310:CDS
TAGAATTGAAATTGGTCCCC+GGG 0.525862 3_2:-89774271 Msa0436310:CDS
TTCCCAAATGGCGTAACCAT+AGG 0.529134 3_2:+89778927 None:intergenic
AATGCCGAATTAGCAGATTA+CGG 0.529226 3_2:-89778979 Msa0436310:five_prime_UTR
CTGACCGAGTCATCACTCCT+AGG 0.534702 3_2:-89779041 Msa0436310:five_prime_UTR
GAGAAATTGCTGTTGTTGAG+GGG 0.535670 3_2:+89779175 None:intergenic
GCATTGAAGTCCTGTGACCT+AGG 0.538432 3_2:+89779024 None:intergenic
TATCACAAGGCAAATGGGCA+AGG 0.539052 3_2:-89773634 Msa0436310:CDS
TCGACCCGTAATAACAGGTA+TGG 0.539172 3_2:+89777107 None:intergenic
TCCAGAAGAGGCAGAAAATG+AGG 0.539198 3_2:-89777267 Msa0436310:intron
GTAATCTGCTAATTCGGCAT+TGG 0.539992 3_2:+89778981 None:intergenic
TGCTTGAACCCTTAGAGCAA+AGG 0.540304 3_2:-89773073 Msa0436310:three_prime_UTR
TCCCAAATGGCGTAACCATA+GGG 0.541410 3_2:+89778928 None:intergenic
TTGGAGAAGAGTGAAAGAGG+AGG 0.544001 3_2:+89779253 None:intergenic
AGAAATTGAATTTCCATCCA+GGG 0.544417 3_2:+89774447 None:intergenic
AGAAATTGCTGTTGTTGAGG+GGG 0.546767 3_2:+89779176 None:intergenic
TGTATCGGTGCAATCTTTGG+AGG 0.548894 3_2:+89775748 None:intergenic
TACGGGTCGAAAATCTAAAG+TGG 0.549532 3_2:-89777094 Msa0436310:five_prime_UTR
GAAAGAAGCAAGTCATGTTG+AGG 0.549877 3_2:-89777797 Msa0436310:five_prime_UTR
AGTGGGCAAATGTCACAAGA+TGG 0.552413 3_2:-89777361 Msa0436310:five_prime_UTR
TTCCCGTGCCTTTGAAACAC+AGG 0.553524 3_2:-89776971 Msa0436310:intron
GACAAGAAAGCATTGCAAGC+AGG 0.555118 3_2:-89777021 Msa0436310:five_prime_UTR
ATCACAAGGCAAATGGGCAA+GGG 0.555350 3_2:-89773633 Msa0436310:CDS
GCATCAGACCTGTGTTTCAA+AGG 0.556209 3_2:+89776963 None:intergenic
TGCTCATGCAACTCCAGAAG+AGG 0.559996 3_2:-89777279 Msa0436310:five_prime_UTR
TAATTGTACCAATTTGAAGA+AGG 0.560822 3_2:-89774570 Msa0436310:five_prime_UTR
TTAATTTCTTGTTACCACTT+AGG 0.560972 3_2:-89773235 Msa0436310:three_prime_UTR
GCATCCAACCATACCTGTAT+CGG 0.561155 3_2:+89775733 None:intergenic
AGACCTGTGTTTCAAAGGCA+CGG 0.561432 3_2:+89776968 None:intergenic
GACCTGTGTTTCAAAGGCAC+GGG 0.565333 3_2:+89776969 None:intergenic
GAGATATTCCTGGGAAGCAA+GGG 0.565396 3_2:-89774215 Msa0436310:CDS
GGTCCCCGGGACGTGTCTAG+TGG 0.566931 3_2:-89774258 Msa0436310:CDS
CTAATAATATGATTTATGGG+TGG 0.568766 3_2:-89773300 Msa0436310:three_prime_UTR
GGAGGCATCATCATGGTACA+TGG 0.569062 3_2:-89775793 Msa0436310:five_prime_UTR
GAAATTGAATTTCCATCCAG+GGG 0.569742 3_2:+89774448 None:intergenic
CAATGGTTTCACTTGTAGGT+CGG 0.569797 3_2:+89777542 None:intergenic
TTAGAATTGAAATTGGTCCC+CGG 0.570679 3_2:-89774272 Msa0436310:CDS
ACTTCCACTAGACACGTCCC+GGG 0.571135 3_2:+89774254 None:intergenic
ATATCCAGGAGAGATATTCC+TGG 0.571372 3_2:-89774225 Msa0436310:CDS
AGGAGATCCTGCTGAAGAAG+TGG 0.571589 3_2:-89773378 Msa0436310:CDS
GTGGGCAAATGTCACAAGAT+GGG 0.573271 3_2:-89777360 Msa0436310:five_prime_UTR
GCAGGAACCAGCCACAACCT+TGG 0.576341 3_2:-89777003 Msa0436310:five_prime_UTR
GTGAGAAATTGCTGTTGTTG+AGG 0.578924 3_2:+89779173 None:intergenic
ATATATTTGGCAGACATCAT+GGG 0.579832 3_2:-89775836 Msa0436310:five_prime_UTR
CGGTCCGGTTCGCGGTACAA+TGG 0.585347 3_2:-89778959 Msa0436310:five_prime_UTR
TTTACCTGATTAATCAAGAG+AGG 0.586404 3_2:+89777475 None:intergenic
AGTCATCACTCCTAGGTCAC+AGG 0.587801 3_2:-89779034 Msa0436310:five_prime_UTR
GAGGTAGAGAGAGTGAGATG+AGG 0.589946 3_2:+89779272 None:intergenic
ATTGTCACTACTGCTAACTC+TGG 0.591910 3_2:+89777766 None:intergenic
CAGATCAAAGAACCCCTGGA+TGG 0.591928 3_2:-89774460 Msa0436310:CDS
TATCCAGGAGAGATATTCCT+GGG 0.592768 3_2:-89774224 Msa0436310:CDS
TACACGATTGAGGCAATGAT+GGG 0.595098 3_2:-89777045 Msa0436310:five_prime_UTR
CGAATTAGCAGATTACGGTC+CGG 0.596537 3_2:-89778974 Msa0436310:five_prime_UTR
TCACAAGGCAAATGGGCAAG+GGG 0.599892 3_2:-89773632 Msa0436310:CDS
CTTAAATCTGCAATATCACA+AGG 0.602226 3_2:-89773647 Msa0436310:CDS
TCACAGATGAAAATGGACAA+AGG 0.608406 3_2:-89775861 Msa0436310:five_prime_UTR
AGAAGGTGAAAGGTTGGTGA+CGG 0.610314 3_2:+89779124 None:intergenic
TTCCATTTGAACAGCCACAA+GGG 0.611470 3_2:-89773421 Msa0436310:CDS
TTTCCATTTGAACAGCCACA+AGG 0.612338 3_2:-89773422 Msa0436310:CDS
CTTGAGAGACACCATTTGTG+TGG 0.613060 3_2:+89779227 None:intergenic
TTGTAAGACCTACACGATTG+AGG 0.616283 3_2:-89777055 Msa0436310:five_prime_UTR
ATGGTACATGGAGATGATGC+TGG 0.617498 3_2:-89775781 Msa0436310:five_prime_UTR
GTGACCTAGGAGTGATGACT+CGG 0.622486 3_2:+89779037 None:intergenic
GGCGGAGAATGATTGGGGAA+CGG 0.627567 3_2:+89779151 None:intergenic
AACACAACCTAGCAGACCAA+GGG 0.628350 3_2:+89773609 None:intergenic
AGTAAACATGTGATTCACAA+TGG 0.630715 3_2:+89777525 None:intergenic
CATCATTGCCTCAATCGTGT+AGG 0.631552 3_2:+89777047 None:intergenic
TAGGAGTGATGACTCGGTCA+GGG 0.637146 3_2:+89779043 None:intergenic
TGAATCACATGTTTACTCAG+TGG 0.643424 3_2:-89777519 Msa0436310:five_prime_UTR
AGGTGAAAGGTTGGTGACGG+CGG 0.643459 3_2:+89779127 None:intergenic
GATTCTTCGAGTTGTCGACT+CGG 0.646760 3_2:+89779070 None:intergenic
AAACACAACCTAGCAGACCA+AGG 0.647106 3_2:+89773608 None:intergenic
TAATCAAGAGAGGAAGATCA+CGG 0.658472 3_2:+89777485 None:intergenic
GTTAGCAGTAGTGACAATTG+GGG 0.660405 3_2:-89777761 Msa0436310:five_prime_UTR
GGACGTGTCTAGTGGAAGTG+TGG 0.684037 3_2:-89774250 Msa0436310:CDS
GCGGTGGCGGAGAATGATTG+GGG 0.684633 3_2:+89779146 None:intergenic
GGAACTTGAAGAGAAGCTCG+TGG 0.700042 3_2:-89777731 Msa0436310:intron
CTTCCACTAGACACGTCCCG+GGG 0.711499 3_2:+89774255 None:intergenic
TATTTGGCAGACATCATGGG+CGG 0.711856 3_2:-89775833 Msa0436310:five_prime_UTR
TTAGCAGTAGTGACAATTGG+GGG 0.717559 3_2:-89777760 Msa0436310:five_prime_UTR
GGTCACAGGACTTCAATGCG+TGG 0.719791 3_2:-89779020 Msa0436310:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAAATAAA+TGG + chr3_2:89773514-89773533 None:intergenic 0.0%
!! AAAAATTAATAAAAAAAATT+AGG + chr3_2:89778337-89778356 None:intergenic 0.0%
!! TTTCTAATAATATGATTTAT+GGG - chr3_2:89779049-89779068 Msa0436310:five_prime_UTR 10.0%
!! CAAAAAAATTAAAGTAAAAC+AGG + chr3_2:89773674-89773693 None:intergenic 15.0%
!!! GTGTTATTAAATCAATTATA+TGG - chr3_2:89773700-89773719 Msa0436310:intron 15.0%
!!! TTATCTTTTAGAATCATATA+TGG - chr3_2:89775465-89775484 Msa0436310:intron 15.0%
!!! GTATAATTTTATGACTAATT+TGG + chr3_2:89775850-89775869 None:intergenic 15.0%
!! TTGTATATTAGTAGAAAATA+TGG + chr3_2:89775936-89775955 None:intergenic 15.0%
!! TCATAAGTTTCAATTTAAAT+TGG + chr3_2:89776137-89776156 None:intergenic 15.0%
!!! ATATTATCCATTTTCTTTTA+TGG - chr3_2:89776377-89776396 Msa0436310:intron 15.0%
!!! TATTATCCATTTTCTTTTAT+GGG - chr3_2:89776378-89776397 Msa0436310:intron 15.0%
!! AATAGAGATATAATATATGA+TGG - chr3_2:89777076-89777095 Msa0436310:five_prime_UTR 15.0%
!! TTAATCTTTACCAAATTATA+AGG - chr3_2:89777540-89777559 Msa0436310:five_prime_UTR 15.0%
!! CTTTCTAATAATATGATTTA+TGG - chr3_2:89779048-89779067 Msa0436310:five_prime_UTR 15.0%
!!! TTATTTAGTTTTGTTTGTGT+AGG - chr3_2:89773527-89773546 Msa0436310:intron 20.0%
!! TTTATCTTGTGTTAAAGAAA+TGG + chr3_2:89773786-89773805 None:intergenic 20.0%
!! CAACATAATCTTAAGTAAAA+AGG + chr3_2:89774225-89774244 None:intergenic 20.0%
!! CAAGCGAAATTAAAATTTAA+AGG + chr3_2:89774289-89774308 None:intergenic 20.0%
!!! GGTAATGAAATTTTATGTTA+TGG + chr3_2:89774472-89774491 None:intergenic 20.0%
!! AGAAAAACAGTCATAAAAAA+AGG + chr3_2:89774663-89774682 None:intergenic 20.0%
!!! TGTTTTTCTTCACATATTAT+CGG - chr3_2:89774674-89774693 Msa0436310:intron 20.0%
!!! TTTGATTTTTCCATTTTTTG+AGG - chr3_2:89774776-89774795 Msa0436310:intron 20.0%
!!! AATATGAGATTTTTTTTCAC+CGG - chr3_2:89775648-89775667 Msa0436310:intron 20.0%
!! AAATATGGTCAAAATAAGTT+AGG + chr3_2:89775921-89775940 None:intergenic 20.0%
!! AAAAGTTGAGTTATATGATA+TGG + chr3_2:89776237-89776256 None:intergenic 20.0%
!! AAATGAATAAAAACAGAAGT+GGG + chr3_2:89776350-89776369 None:intergenic 20.0%
!! TAAATGAATAAAAACAGAAG+TGG + chr3_2:89776351-89776370 None:intergenic 20.0%
!!! ATTATCCATTTTCTTTTATG+GGG - chr3_2:89776379-89776398 Msa0436310:intron 20.0%
!!! TAATATATGATGGAAAATTG+AGG - chr3_2:89777086-89777105 Msa0436310:five_prime_UTR 20.0%
!! TGAGAATCTTATAAAATGAA+AGG + chr3_2:89777593-89777612 None:intergenic 20.0%
!! TTTATAAGATTCTCATTTGA+AGG - chr3_2:89777598-89777617 Msa0436310:intron 20.0%
!! TTATAAGATTCTCATTTGAA+GGG - chr3_2:89777599-89777618 Msa0436310:intron 20.0%
!! TATATTCAGATAGTCAAATA+TGG + chr3_2:89778021-89778040 None:intergenic 20.0%
!!! TATTTTTTTCTTCCAATTTC+AGG - chr3_2:89778048-89778067 Msa0436310:intron 20.0%
!!! ATTTTTTTCTTCCAATTTCA+GGG - chr3_2:89778049-89778068 Msa0436310:intron 20.0%
!! TAATAATATGATTTATGGGT+GGG - chr3_2:89779053-89779072 Msa0436310:five_prime_UTR 20.0%
! AATGGCAAAATGAAAATTGA+AGG + chr3_2:89773496-89773515 None:intergenic 25.0%
! TTATTTGAATGTCAAGTTCA+AGG - chr3_2:89773551-89773570 Msa0436310:intron 25.0%
! ATAAGTTGTTTATCCAAACA+AGG + chr3_2:89773726-89773745 None:intergenic 25.0%
!!! ACTTATTTTGCAGCTTATAT+AGG - chr3_2:89773740-89773759 Msa0436310:intron 25.0%
!!! ATTTTAATTTCGCTTGTACT+TGG - chr3_2:89774293-89774312 Msa0436310:intron 25.0%
!!! TTTTAATTTCGCTTGTACTT+GGG - chr3_2:89774294-89774313 Msa0436310:intron 25.0%
! TTTGTAGTGTAAGAATATGA+GGG - chr3_2:89774404-89774423 Msa0436310:intron 25.0%
!!! AAAGTGATATCTTGATAATG+TGG - chr3_2:89774433-89774452 Msa0436310:intron 25.0%
!! GTTTTTCTTCACATATTATC+GGG - chr3_2:89774675-89774694 Msa0436310:intron 25.0%
! AAAATCAAAGACAAAACCTT+AGG + chr3_2:89774765-89774784 None:intergenic 25.0%
!! AATTCAAGAGTTCTAACAAA+TGG + chr3_2:89775032-89775051 None:intergenic 25.0%
! TTAGAACTCTTGAATTTCTT+TGG - chr3_2:89775036-89775055 Msa0436310:intron 25.0%
! AAGAAAAAAAAATACTCCAC+AGG + chr3_2:89775441-89775460 None:intergenic 25.0%
!!! TTTTTTTCTTCTGTGAGTTA+TGG - chr3_2:89775557-89775576 Msa0436310:intron 25.0%
! TTAAGCTCAAAATTATGCAT+TGG - chr3_2:89776055-89776074 Msa0436310:intron 25.0%
! AATGAATAAAAACAGAAGTG+GGG + chr3_2:89776349-89776368 None:intergenic 25.0%
!! ATTTCTCTTGTAGTTTTTCT+AGG + chr3_2:89777025-89777044 None:intergenic 25.0%
! TTTCATACATAACATCCAAT+AGG - chr3_2:89777198-89777217 Msa0436310:intron 25.0%
! TTACATGCAAAATGATTTCA+TGG + chr3_2:89777351-89777370 None:intergenic 25.0%
! AACTTCAGTTAGAGTATATT+CGG - chr3_2:89777461-89777480 Msa0436310:intron 25.0%
! TCATAGCATTCCTTATAATT+TGG + chr3_2:89777553-89777572 None:intergenic 25.0%
! TATATTTGGATGTAGAAGTT+TGG + chr3_2:89777665-89777684 None:intergenic 25.0%
! AAACTTCTACATCCAAATAT+AGG - chr3_2:89777664-89777683 Msa0436310:intron 25.0%
! CATGTAAACTATCCTATATT+TGG + chr3_2:89777679-89777698 None:intergenic 25.0%
! TAATTGTACCAATTTGAAGA+AGG - chr3_2:89777782-89777801 Msa0436310:five_prime_UTR 25.0%
!! ACTTGGATAGATTTCATTTT+TGG - chr3_2:89777951-89777970 Msa0436310:intron 25.0%
!!! CTTGGATAGATTTCATTTTT+GGG - chr3_2:89777952-89777971 Msa0436310:intron 25.0%
!!! CAAGTAAAAAGTATCACAAA+AGG + chr3_2:89778280-89778299 None:intergenic 25.0%
!! TTTTACTTGTGATAGACATT+TGG - chr3_2:89778291-89778310 Msa0436310:intron 25.0%
! AAGACTAGAATATATCATTC+AGG + chr3_2:89778375-89778394 None:intergenic 25.0%
!!! CTTCTGAAAAGTATTTAACT+AGG + chr3_2:89778409-89778428 None:intergenic 25.0%
!! CTAGTTAAATACTTTTCAGA+AGG - chr3_2:89778407-89778426 Msa0436310:intron 25.0%
! ATTTAGTGTATTACATAGAG+TGG + chr3_2:89778464-89778483 None:intergenic 25.0%
! AATTCCAATCTCTATTAGAA+AGG - chr3_2:89778526-89778545 Msa0436310:intron 25.0%
! ATTTCCTTTCTAATAGAGAT+TGG + chr3_2:89778533-89778552 None:intergenic 25.0%
! CTATTAGAAAGGAAATCAAT+TGG - chr3_2:89778537-89778556 Msa0436310:intron 25.0%
!! ATTAAAAGATGTTTGATGAC+AGG - chr3_2:89778954-89778973 Msa0436310:five_prime_UTR 25.0%
! CTAATAATATGATTTATGGG+TGG - chr3_2:89779052-89779071 Msa0436310:five_prime_UTR 25.0%
! TTAATTTCTTGTTACCACTT+AGG - chr3_2:89779117-89779136 Msa0436310:five_prime_UTR 25.0%
AGAAAAAGAATGAACCTGAA+TGG + chr3_2:89773452-89773471 None:intergenic 30.0%
! TAGTAACATGTATTTTCCAC+AGG - chr3_2:89773584-89773603 Msa0436310:intron 30.0%
TGGTAATTAATGTTTACCTG+TGG + chr3_2:89773603-89773622 None:intergenic 30.0%
! TATCTGCAATTTGTTTGCAT+AGG - chr3_2:89773643-89773662 Msa0436310:CDS 30.0%
!! ATCAATTATATGGCCTTGTT+TGG - chr3_2:89773710-89773729 Msa0436310:intron 30.0%
TAAGCTATCCTAGTGAATTT+AGG - chr3_2:89773834-89773853 Msa0436310:intron 30.0%
AAGCTATCCTAGTGAATTTA+GGG - chr3_2:89773835-89773854 Msa0436310:intron 30.0%
CTTATTTCCCTAAATTCACT+AGG + chr3_2:89773845-89773864 None:intergenic 30.0%
AATATCTGATCTGACACTAT+GGG + chr3_2:89773981-89774000 None:intergenic 30.0%
AACGTCGAAAAAATTAAGCT+AGG + chr3_2:89774004-89774023 None:intergenic 30.0%
ACAATAAAAAAAGGGTAACC+CGG + chr3_2:89774137-89774156 None:intergenic 30.0%
CTACAAACAGTACAAGATAT+AGG + chr3_2:89774391-89774410 None:intergenic 30.0%
GTTTGTAGTGTAAGAATATG+AGG - chr3_2:89774403-89774422 Msa0436310:intron 30.0%
TCTTTCTCTATAAAGGAGTA+AGG + chr3_2:89774541-89774560 None:intergenic 30.0%
ACTTGCTTCTTTCTCTATAA+AGG + chr3_2:89774548-89774567 None:intergenic 30.0%
AGTAAACATGTGATTCACAA+TGG + chr3_2:89774830-89774849 None:intergenic 30.0%
TTTACCTGATTAATCAAGAG+AGG + chr3_2:89774880-89774899 None:intergenic 30.0%
TTCATTCAACAGGAAAAAAC+AGG + chr3_2:89774963-89774982 None:intergenic 30.0%
!!! GTTTTTTCCTGTTGAATGAA+CGG - chr3_2:89774963-89774982 Msa0436310:intron 30.0%
!!! TTTTTTCCTGTTGAATGAAC+GGG - chr3_2:89774964-89774983 Msa0436310:intron 30.0%
TAGTAACAAATAAGAAGTCG+TGG + chr3_2:89775589-89775608 None:intergenic 30.0%
!! TTACTGAAACTTTGAGTTGA+CGG + chr3_2:89775630-89775649 None:intergenic 30.0%
!!! GCTGTTTTTCTGTAAATAAG+AGG - chr3_2:89775696-89775715 Msa0436310:intron 30.0%
! GTTTTTCTGTAAATAAGAGG+AGG - chr3_2:89775699-89775718 Msa0436310:intron 30.0%
ACAACAATCCTTCCTAAAAT+AGG - chr3_2:89775777-89775796 Msa0436310:five_prime_UTR 30.0%
!! TTGGATTTCCTATTTTAGGA+AGG + chr3_2:89775788-89775807 None:intergenic 30.0%
! CTAGTTGGATTTCCTATTTT+AGG + chr3_2:89775792-89775811 None:intergenic 30.0%
! GTTTTTGTACAAGTGATAGT+AGG + chr3_2:89775816-89775835 None:intergenic 30.0%
TTCAAATGAGTCATCTATTG+CGG + chr3_2:89775883-89775902 None:intergenic 30.0%
TCAACTGTGTCATGTATTAA+GGG - chr3_2:89776092-89776111 Msa0436310:intron 30.0%
GCTTGGATTTATCATAAGTA+GGG + chr3_2:89776201-89776220 None:intergenic 30.0%
ATGATATGGCACAATCAATA+TGG + chr3_2:89776223-89776242 None:intergenic 30.0%
TTGATTAAATCCTTTCAACG+AGG - chr3_2:89776436-89776455 Msa0436310:intron 30.0%
ATGGACAAAGGGAATATATT+TGG - chr3_2:89776503-89776522 Msa0436310:intron 30.0%
AATATATTTGGCAGACATCA+TGG - chr3_2:89776515-89776534 Msa0436310:intron 30.0%
ATATATTTGGCAGACATCAT+GGG - chr3_2:89776516-89776535 Msa0436310:intron 30.0%
CATGTGTAGATATCTTTGTT+AGG - chr3_2:89776657-89776676 Msa0436310:intron 30.0%
TTACATTACTTGTCTGATCA+AGG + chr3_2:89776719-89776738 None:intergenic 30.0%
!! AGATTTGCTACACAAGAATA+TGG - chr3_2:89776738-89776757 Msa0436310:intron 30.0%
!! GATTTGCTACACAAGAATAT+GGG - chr3_2:89776739-89776758 Msa0436310:intron 30.0%
GACCTATAGTTTATGTAGTA+AGG - chr3_2:89776955-89776974 Msa0436310:intron 30.0%
CTCCTTACTACATAAACTAT+AGG + chr3_2:89776960-89776979 None:intergenic 30.0%
! TGAGATCAGATTTTGAATTG+AGG + chr3_2:89777229-89777248 None:intergenic 30.0%
TCATGGAAGAAAATGAATTG+AGG + chr3_2:89777334-89777353 None:intergenic 30.0%
TTCTTAGTGTAATATCTCAC+TGG - chr3_2:89777414-89777433 Msa0436310:intron 30.0%
TTCATCATCCTTCTTCAAAT+TGG + chr3_2:89777793-89777812 None:intergenic 30.0%
GAAGAAGGATGATGAAAAAA+TGG - chr3_2:89777797-89777816 Msa0436310:five_prime_UTR 30.0%
AGAAATTGAATTTCCATCCA+GGG + chr3_2:89777908-89777927 None:intergenic 30.0%
TGGATGGAAATTCAATTTCT+GGG - chr3_2:89777908-89777927 Msa0436310:intron 30.0%
! ATTCAATTTCTGGGAAATGA+AGG - chr3_2:89777917-89777936 Msa0436310:intron 30.0%
CAGAATCAATGTGTACAATT+TGG + chr3_2:89777979-89777998 None:intergenic 30.0%
GTTCCTCTTAGAATTGAAAT+TGG - chr3_2:89778073-89778092 Msa0436310:intron 30.0%
CTTAAATCTGCAATATCACA+AGG - chr3_2:89778705-89778724 Msa0436310:intron 30.0%
GTCATTAGAGTTGTTAATCA+TGG + chr3_2:89778839-89778858 None:intergenic 30.0%
AGATGAGTTAAAAGTGAAAG+AGG - chr3_2:89778884-89778903 Msa0436310:intron 30.0%
TTAAAAGTGAAAGAGGAAAC+TGG - chr3_2:89778891-89778910 Msa0436310:intron 30.0%
! AAACATCTTTTAATCCCTTG+TGG + chr3_2:89778948-89778967 None:intergenic 30.0%
! TTATACAACTTTTGCCTAAG+TGG + chr3_2:89779134-89779153 None:intergenic 30.0%
ACTTAGGCAAAAGTTGTATA+AGG - chr3_2:89779133-89779152 Msa0436310:five_prime_UTR 30.0%
CTTAGGCAAAAGTTGTATAA+GGG - chr3_2:89779134-89779153 Msa0436310:five_prime_UTR 30.0%
!! TTTTTGGAGAAGAGTGAAAG+AGG + chr3_2:89773105-89773124 None:intergenic 35.0%
TTCTCCAAAAACCACACAAA+TGG - chr3_2:89773114-89773133 Msa0436310:three_prime_UTR 35.0%
! TGAGAAATTGCTGTTGTTGA+GGG + chr3_2:89773181-89773200 None:intergenic 35.0%
AATGCCGAATTAGCAGATTA+CGG - chr3_2:89773373-89773392 Msa0436310:CDS 35.0%
GAATATCTGATCTGACACTA+TGG + chr3_2:89773982-89774001 None:intergenic 35.0%
TTAAGGCTGCTTGTAAAAAC+AGG - chr3_2:89774039-89774058 Msa0436310:intron 35.0%
TAAGGCTGCTTGTAAAAACA+GGG - chr3_2:89774040-89774059 Msa0436310:intron 35.0%
!! GAAGGCATCAAACAAATGAT+GGG + chr3_2:89774493-89774512 None:intergenic 35.0%
!! AGAAGGCATCAAACAAATGA+TGG + chr3_2:89774494-89774513 None:intergenic 35.0%
AAAGAAGCAAGTCATGTTGA+GGG - chr3_2:89774556-89774575 Msa0436310:exon 35.0%
AGTTAGCAGTAGTGACAATT+GGG - chr3_2:89774590-89774609 Msa0436310:intron 35.0%
!!! TTTTCCATTTTTTGAGGCTG+TGG - chr3_2:89774782-89774801 Msa0436310:intron 35.0%
TTCACAATGGTTTCACTTGT+AGG + chr3_2:89774817-89774836 None:intergenic 35.0%
TGAATCACATGTTTACTCAG+TGG - chr3_2:89774833-89774852 Msa0436310:intron 35.0%
TAATCAAGAGAGGAAGATCA+CGG + chr3_2:89774870-89774889 None:intergenic 35.0%
TCTTCCTCTCTTGATTAATC+AGG - chr3_2:89774873-89774892 Msa0436310:intron 35.0%
! TTTTGCTTACAAACGAAACC+AGG + chr3_2:89774909-89774928 None:intergenic 35.0%
CTTGAATTTCTTTGGCAAGA+AGG - chr3_2:89775044-89775063 Msa0436310:intron 35.0%
ATCTTGACGAAGAGAATATG+CGG + chr3_2:89775112-89775131 None:intergenic 35.0%
! AGCTTGTTCAAAAGCAAATC+TGG + chr3_2:89775224-89775243 None:intergenic 35.0%
! TCTAAAGTGGAAACATTTGC+TGG - chr3_2:89775271-89775290 Msa0436310:intron 35.0%
CACAAAATACTTCATTCCTG+TGG - chr3_2:89775422-89775441 Msa0436310:intron 35.0%
!! AGCTTGCTACTTAAAGTTCA+AGG + chr3_2:89775493-89775512 None:intergenic 35.0%
! CTTGATTTTGCCAGCTATTT+CGG - chr3_2:89775511-89775530 Msa0436310:intron 35.0%
TTTAAAGAGACCGAAATAGC+TGG + chr3_2:89775524-89775543 None:intergenic 35.0%
TTGCAGCTAATGTAGCATTA+AGG - chr3_2:89775671-89775690 Msa0436310:intron 35.0%
TTCTGTAAATAAGAGGAGGT+AGG - chr3_2:89775703-89775722 Msa0436310:intron 35.0%
AAATAAGAGGAGGTAGGATT+AGG - chr3_2:89775709-89775728 Msa0436310:intron 35.0%
TCAAATGAGTCATCTATTGC+GGG + chr3_2:89775882-89775901 None:intergenic 35.0%
! TATGCATTGGTATGCGTAAT+AGG - chr3_2:89776068-89776087 Msa0436310:intron 35.0%
! ATGCATTGGTATGCGTAATA+GGG - chr3_2:89776069-89776088 Msa0436310:intron 35.0%
GTCAACTGTGTCATGTATTA+AGG - chr3_2:89776091-89776110 Msa0436310:intron 35.0%
GGCTTGGATTTATCATAAGT+AGG + chr3_2:89776202-89776221 None:intergenic 35.0%
! GACTATAGCAAACCTTTTAG+TGG - chr3_2:89776300-89776319 Msa0436310:intron 35.0%
GAAGACCCCATAAAAGAAAA+TGG + chr3_2:89776387-89776406 None:intergenic 35.0%
TCACAGATGAAAATGGACAA+AGG - chr3_2:89776491-89776510 Msa0436310:intron 35.0%
CACAGATGAAAATGGACAAA+GGG - chr3_2:89776492-89776511 Msa0436310:intron 35.0%
GGTTAAATGTAGCACTTTAG+AGG - chr3_2:89776678-89776697 Msa0436310:intron 35.0%
!!! CGCTTATTTTATGCTCGAAT+TGG + chr3_2:89776788-89776807 None:intergenic 35.0%
ACAACATTAGAGAGAGACTT+GGG - chr3_2:89776870-89776889 Msa0436310:intron 35.0%
AGTAAGGAGAGTAGATAAGA+CGG - chr3_2:89776971-89776990 Msa0436310:intron 35.0%
TCAGTTAGAGTATATTCGGA+TGG - chr3_2:89777465-89777484 Msa0436310:intron 35.0%
GAAATTGAATTTCCATCCAG+GGG + chr3_2:89777907-89777926 None:intergenic 35.0%
CAGAAATTGAATTTCCATCC+AGG + chr3_2:89777909-89777928 None:intergenic 35.0%
CTGGATGGAAATTCAATTTC+TGG - chr3_2:89777907-89777926 Msa0436310:intron 35.0%
! ATTTCTGGGAAATGAAGGTT+CGG - chr3_2:89777922-89777941 Msa0436310:intron 35.0%
TGAAGGTTCGGATTTAAACT+TGG - chr3_2:89777934-89777953 Msa0436310:intron 35.0%
! ATTGATTCTGTTTATGCTGC+TGG - chr3_2:89777989-89778008 Msa0436310:intron 35.0%
GGACCAATTTCAATTCTAAG+AGG + chr3_2:89778079-89778098 None:intergenic 35.0%
TTAGAATTGAAATTGGTCCC+CGG - chr3_2:89778080-89778099 Msa0436310:intron 35.0%
!! GAAAGTGTTTGGAATCTCTA+TGG - chr3_2:89778159-89778178 Msa0436310:intron 35.0%
ACATACACCTCCAAAATTGA+AGG + chr3_2:89778187-89778206 None:intergenic 35.0%
GGTGTATGTTAAAGACAAGT+TGG - chr3_2:89778198-89778217 Msa0436310:intron 35.0%
AGACATTTGGATCTAACTGT+TGG - chr3_2:89778304-89778323 Msa0436310:intron 35.0%
! TGTATTACATAGAGTGGACT+TGG + chr3_2:89778458-89778477 None:intergenic 35.0%
! AAAGCATTAGAGACAGTTCT+CGG + chr3_2:89778491-89778510 None:intergenic 35.0%
AACTGTCTCTAATGCTTTAG+TGG - chr3_2:89778493-89778512 Msa0436310:intron 35.0%
TGCAATATCACAAGGCAAAT+GGG - chr3_2:89778713-89778732 Msa0436310:intron 35.0%
GTTGTTAATCATGGTCTTTC+TGG + chr3_2:89778830-89778849 None:intergenic 35.0%
CTTGCAGAGTTAGTAAGATT+TGG + chr3_2:89779009-89779028 None:intergenic 35.0%
! GACACCATTTGTGTGGTTTT+TGG + chr3_2:89773121-89773140 None:intergenic 40.0%
! AGAAATTGCTGTTGTTGAGG+GGG + chr3_2:89773179-89773198 None:intergenic 40.0%
! GAGAAATTGCTGTTGTTGAG+GGG + chr3_2:89773180-89773199 None:intergenic 40.0%
! GTGAGAAATTGCTGTTGTTG+AGG + chr3_2:89773182-89773201 None:intergenic 40.0%
GTAATCTGCTAATTCGGCAT+TGG + chr3_2:89773374-89773393 None:intergenic 40.0%
ACAATGGTTATTCGTCCCTA+TGG - chr3_2:89773409-89773428 Msa0436310:CDS 40.0%
AATGTCAAGTTCAAGGAGAC+TGG - chr3_2:89773558-89773577 Msa0436310:intron 40.0%
! CTGCAATTTGTTTGCATAGG+AGG - chr3_2:89773646-89773665 Msa0436310:CDS 40.0%
CTGCTTGTAAAAACAGGGTA+AGG - chr3_2:89774045-89774064 Msa0436310:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr3_2:89774071-89774090 Msa0436310:intron 40.0%
ACAGTACAAGATATAGGCAC+AGG + chr3_2:89774385-89774404 None:intergenic 40.0%
TGCAGAACAGATTTGAGAGA+AGG + chr3_2:89774511-89774530 None:intergenic 40.0%
GAAAGAAGCAAGTCATGTTG+AGG - chr3_2:89774555-89774574 Msa0436310:exon 40.0%
ATTGTCACTACTGCTAACTC+TGG + chr3_2:89774589-89774608 None:intergenic 40.0%
GAGTTAGCAGTAGTGACAAT+TGG - chr3_2:89774589-89774608 Msa0436310:intron 40.0%
GTTAGCAGTAGTGACAATTG+GGG - chr3_2:89774591-89774610 Msa0436310:intron 40.0%
TTAGCAGTAGTGACAATTGG+GGG - chr3_2:89774592-89774611 Msa0436310:intron 40.0%
CAATGGTTTCACTTGTAGGT+CGG + chr3_2:89774813-89774832 None:intergenic 40.0%
TAATCAGGTAAACGATGTCC+TGG - chr3_2:89774888-89774907 Msa0436310:intron 40.0%
AGCTGCCATACCTGTTATTA+CGG - chr3_2:89775240-89775259 Msa0436310:intron 40.0%
! GATTTTCGACCCGTAATAAC+AGG + chr3_2:89775253-89775272 None:intergenic 40.0%
TACGGGTCGAAAATCTAAAG+TGG - chr3_2:89775258-89775277 Msa0436310:intron 40.0%
TTGTAAGACCTACACGATTG+AGG - chr3_2:89775297-89775316 Msa0436310:intron 40.0%
TACACGATTGAGGCAATGAT+GGG - chr3_2:89775307-89775326 Msa0436310:intron 40.0%
!! AAAAGTTTTGGCCAAGGTTG+TGG + chr3_2:89775363-89775382 None:intergenic 40.0%
AATGCTACATTAGCTGCAAC+CGG + chr3_2:89775670-89775689 None:intergenic 40.0%
CAGCTAATGTAGCATTAAGG+AGG - chr3_2:89775674-89775693 Msa0436310:intron 40.0%
GAAGGATTGTTGTGTAAGTG+TGG + chr3_2:89775770-89775789 None:intergenic 40.0%
! CAAGTGATAGTAGGACTAGT+TGG + chr3_2:89775807-89775826 None:intergenic 40.0%
CTGTGTCATGTATTAAGGGA+CGG - chr3_2:89776096-89776115 Msa0436310:intron 40.0%
ATGGCACAATCAATATGGCT+TGG + chr3_2:89776218-89776237 None:intergenic 40.0%
CACTCATGGTTTCTATAGCT+TGG + chr3_2:89776270-89776289 None:intergenic 40.0%
AGTCTTTCAGTAAGCACTCA+TGG + chr3_2:89776284-89776303 None:intergenic 40.0%
GTGCAGTTCACAGATGAAAA+TGG - chr3_2:89776484-89776503 Msa0436310:intron 40.0%
!! GTTAGTACTCGTTTTGTTGG+AGG - chr3_2:89776541-89776560 Msa0436310:intron 40.0%
!!! TTTTGTTGGAGGCATCATCA+TGG - chr3_2:89776552-89776571 Msa0436310:intron 40.0%
!! CAATCTTTGGAGGAAGCATT+AGG + chr3_2:89776597-89776616 None:intergenic 40.0%
AAGAATATGGGACAGAGTGT+TGG - chr3_2:89776751-89776770 Msa0436310:intron 40.0%
! AGAATATGGGACAGAGTGTT+GGG - chr3_2:89776752-89776771 Msa0436310:intron 40.0%
CGAGCATAAAATAAGCGTAG+AGG - chr3_2:89776791-89776810 Msa0436310:intron 40.0%
AAATAAGCGTAGAGGAGATG+AGG - chr3_2:89776799-89776818 Msa0436310:intron 40.0%
TGTGGTAAGACTAGCAAGAT+AGG - chr3_2:89776837-89776856 Msa0436310:intron 40.0%
GACAACATTAGAGAGAGACT+TGG - chr3_2:89776869-89776888 Msa0436310:intron 40.0%
CAACATTAGAGAGAGACTTG+GGG - chr3_2:89776871-89776890 Msa0436310:intron 40.0%
! TTCACCGTCTTTTCTACAAG+AGG + chr3_2:89776902-89776921 None:intergenic 40.0%
TAGAAAAGACGGTGAAAACC+CGG - chr3_2:89776906-89776925 Msa0436310:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG - chr3_2:89776993-89777012 Msa0436310:five_prime_UTR 40.0%
TTATACCACTAAGTGGTGGT+CGG + chr3_2:89777131-89777150 None:intergenic 40.0%
TGAATTGAGGTGAGTCCTAT+TGG + chr3_2:89777216-89777235 None:intergenic 40.0%
! ACAGTGAAAGCTGTCTCTTT+TGG - chr3_2:89777279-89777298 Msa0436310:five_prime_UTR 40.0%
CACTGGATGTATTCATGCAT+CGG - chr3_2:89777431-89777450 Msa0436310:intron 40.0%
GTTAGAGTATATTCGGATGG+AGG - chr3_2:89777468-89777487 Msa0436310:intron 40.0%
TTGGATGTAGAAGTTTGGAG+TGG + chr3_2:89777660-89777679 None:intergenic 40.0%
CAGCATGAGCTTGTCAAAAA+TGG + chr3_2:89777741-89777760 None:intergenic 40.0%
GTACAATTACCACCTAAACC+AGG + chr3_2:89777771-89777790 None:intergenic 40.0%
AAAGAAGCTCTTCAAAGCTC+TGG - chr3_2:89777846-89777865 Msa0436310:intron 40.0%
TAAGAGGAACTCCCTGAAAT+TGG + chr3_2:89778063-89778082 None:intergenic 40.0%
TAGAATTGAAATTGGTCCCC+GGG - chr3_2:89778081-89778100 Msa0436310:intron 40.0%
ATATCCAGGAGAGATATTCC+TGG - chr3_2:89778127-89778146 Msa0436310:intron 40.0%
TATCCAGGAGAGATATTCCT+GGG - chr3_2:89778128-89778147 Msa0436310:intron 40.0%
! CTCTATGGAGCCTTCAATTT+TGG - chr3_2:89778174-89778193 Msa0436310:intron 40.0%
! TATGGAGCCTTCAATTTTGG+AGG - chr3_2:89778177-89778196 Msa0436310:intron 40.0%
! CGAGATACAGTCTTCTCTTT+TGG - chr3_2:89778222-89778241 Msa0436310:intron 40.0%
!! TACAGTCTTCTCTTTTGGAG+AGG - chr3_2:89778227-89778246 Msa0436310:intron 40.0%
!! ACAGTCTTCTCTTTTGGAGA+GGG - chr3_2:89778228-89778247 Msa0436310:intron 40.0%
!! TTGGATCTAACTGTTGGTTC+TGG - chr3_2:89778310-89778329 Msa0436310:intron 40.0%
! TACATAGAGTGGACTTGGTT+TGG + chr3_2:89778453-89778472 None:intergenic 40.0%
CAATTGGAATGAGTTCCTTG+TGG - chr3_2:89778553-89778572 Msa0436310:intron 40.0%
TGTCAATTTGCCTGTTTGCT+GGG + chr3_2:89778623-89778642 None:intergenic 40.0%
ATGTCAATTTGCCTGTTTGC+TGG + chr3_2:89778624-89778643 None:intergenic 40.0%
CTGCAATATCACAAGGCAAA+TGG - chr3_2:89778712-89778731 Msa0436310:intron 40.0%
TTTCCATTTGAACAGCCACA+AGG - chr3_2:89778930-89778949 Msa0436310:five_prime_UTR 40.0%
TTCCATTTGAACAGCCACAA+GGG - chr3_2:89778931-89778950 Msa0436310:five_prime_UTR 40.0%
AAAATAGCCACTTCTTCAGC+AGG + chr3_2:89778984-89779003 None:intergenic 40.0%
TTGGAGAAGAGTGAAAGAGG+AGG + chr3_2:89773102-89773121 None:intergenic 45.0%
CTTGAGAGACACCATTTGTG+TGG + chr3_2:89773128-89773147 None:intergenic 45.0%
!! AGAAGGTGAAAGGTTGGTGA+CGG + chr3_2:89773231-89773250 None:intergenic 45.0%
!! GATTCTTCGAGTTGTCGACT+CGG + chr3_2:89773285-89773304 None:intergenic 45.0%
CGGACCGTAATCTGCTAATT+CGG + chr3_2:89773380-89773399 None:intergenic 45.0%
CGAATTAGCAGATTACGGTC+CGG - chr3_2:89773378-89773397 Msa0436310:CDS 45.0%
ATAACCATTGTACCGCGAAC+CGG + chr3_2:89773400-89773419 None:intergenic 45.0%
TCCCTATGGTTACGCCATTT+GGG - chr3_2:89773423-89773442 Msa0436310:CDS 45.0%
TCCCAAATGGCGTAACCATA+GGG + chr3_2:89773427-89773446 None:intergenic 45.0%
TTCCCAAATGGCGTAACCAT+AGG + chr3_2:89773428-89773447 None:intergenic 45.0%
AACCTGAATGGCTTCCCAAA+TGG + chr3_2:89773440-89773459 None:intergenic 45.0%
AAGCACTTGCGACACTGTTT+GGG + chr3_2:89773919-89773938 None:intergenic 45.0%
TAAGCACTTGCGACACTGTT+TGG + chr3_2:89773920-89773939 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr3_2:89774067-89774086 Msa0436310:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr3_2:89774070-89774089 Msa0436310:intron 45.0%
CGTTGAAAAGCTGTGACCTA+AGG - chr3_2:89774746-89774765 Msa0436310:intron 45.0%
! TTGAATGAACGGGCTTCAGT+GGG - chr3_2:89774974-89774993 Msa0436310:intron 45.0%
AGTGGGCAAATGTCACAAGA+TGG - chr3_2:89774991-89775010 Msa0436310:intron 45.0%
GTGGGCAAATGTCACAAGAT+GGG - chr3_2:89774992-89775011 Msa0436310:intron 45.0%
TCCAGAAGAGGCAGAAAATG+AGG - chr3_2:89775085-89775104 Msa0436310:intron 45.0%
! ACCTCATTTTCTGCCTCTTC+TGG + chr3_2:89775089-89775108 None:intergenic 45.0%
CAAGTATTCTGCTCTGTTGC+AGG - chr3_2:89775174-89775193 Msa0436310:intron 45.0%
GCTGCCATACCTGTTATTAC+GGG - chr3_2:89775241-89775260 Msa0436310:intron 45.0%
TCGACCCGTAATAACAGGTA+TGG + chr3_2:89775248-89775267 None:intergenic 45.0%
CATCATTGCCTCAATCGTGT+AGG + chr3_2:89775308-89775327 None:intergenic 45.0%
CTACACGATTGAGGCAATGA+TGG - chr3_2:89775306-89775325 Msa0436310:intron 45.0%
!! GACAAGAAAGCATTGCAAGC+AGG - chr3_2:89775331-89775350 Msa0436310:intron 45.0%
!! CAAAGGCACGGGAAAAGTTT+TGG + chr3_2:89775375-89775394 None:intergenic 45.0%
AGACCTGTGTTTCAAAGGCA+CGG + chr3_2:89775387-89775406 None:intergenic 45.0%
GCATCAGACCTGTGTTTCAA+AGG + chr3_2:89775392-89775411 None:intergenic 45.0%
ATGAGTCATCTATTGCGGGA+CGG + chr3_2:89775878-89775897 None:intergenic 45.0%
TGTCATGTATTAAGGGACGG+AGG - chr3_2:89776099-89776118 Msa0436310:intron 45.0%
GTCATGTATTAAGGGACGGA+GGG - chr3_2:89776100-89776119 Msa0436310:intron 45.0%
GAAGTGGGGAAAACAGAATC+TGG + chr3_2:89776335-89776354 None:intergenic 45.0%
TATTTGGCAGACATCATGGG+CGG - chr3_2:89776519-89776538 Msa0436310:intron 45.0%
! GCGGTTAGTACTCGTTTTGT+TGG - chr3_2:89776538-89776557 Msa0436310:intron 45.0%
ATGGTACATGGAGATGATGC+TGG - chr3_2:89776571-89776590 Msa0436310:intron 45.0%
! TGTATCGGTGCAATCTTTGG+AGG + chr3_2:89776607-89776626 None:intergenic 45.0%
! TCCAAAGATTGCACCGATAC+AGG - chr3_2:89776606-89776625 Msa0436310:intron 45.0%
! ACCTGTATCGGTGCAATCTT+TGG + chr3_2:89776610-89776629 None:intergenic 45.0%
! AGATTGCACCGATACAGGTA+TGG - chr3_2:89776611-89776630 Msa0436310:intron 45.0%
GCATCCAACCATACCTGTAT+CGG + chr3_2:89776622-89776641 None:intergenic 45.0%
CAGGTATGGTTGGATGCTAT+TGG - chr3_2:89776625-89776644 Msa0436310:intron 45.0%
AGGATGTTGCGTTGTATGTG+TGG - chr3_2:89776819-89776838 Msa0436310:intron 45.0%
AGCGCCTCTTGTAGAAAAGA+CGG - chr3_2:89776895-89776914 Msa0436310:intron 45.0%
AAGGAGAGTAGATAAGACGG+AGG - chr3_2:89776974-89776993 Msa0436310:five_prime_UTR 45.0%
GACCACCACTTAGTGGTATA+AGG - chr3_2:89777130-89777149 Msa0436310:five_prime_UTR 45.0%
! AGCCTTATACCACTAAGTGG+TGG + chr3_2:89777135-89777154 None:intergenic 45.0%
! CCAAGCCTTATACCACTAAG+TGG + chr3_2:89777138-89777157 None:intergenic 45.0%
CCACTTAGTGGTATAAGGCT+TGG - chr3_2:89777135-89777154 Msa0436310:five_prime_UTR 45.0%
GGAGGAGATTGAGAAGATGA+AGG - chr3_2:89777486-89777505 Msa0436310:five_prime_UTR 45.0%
AGAGATATTCCTGGGAAGCA+AGG - chr3_2:89778136-89778155 Msa0436310:intron 45.0%
GAGATATTCCTGGGAAGCAA+GGG - chr3_2:89778137-89778156 Msa0436310:intron 45.0%
GGGCAATTGCATTTCGAGAT+AGG - chr3_2:89778248-89778267 Msa0436310:intron 45.0%
TGCACAACATGATGACCACA+AGG + chr3_2:89778571-89778590 None:intergenic 45.0%
! GTCAATTTGCCTGTTTGCTG+GGG + chr3_2:89778622-89778641 None:intergenic 45.0%
TATCACAAGGCAAATGGGCA+AGG - chr3_2:89778718-89778737 Msa0436310:intron 45.0%
ATCACAAGGCAAATGGGCAA+GGG - chr3_2:89778719-89778738 Msa0436310:intron 45.0%
AACACAACCTAGCAGACCAA+GGG + chr3_2:89778746-89778765 None:intergenic 45.0%
AAACACAACCTAGCAGACCA+AGG + chr3_2:89778747-89778766 None:intergenic 45.0%
AGGAAACTGGAGCAACTATC+AGG - chr3_2:89778904-89778923 Msa0436310:intron 45.0%
ATCCCTTGTGGCTGTTCAAA+TGG + chr3_2:89778936-89778955 None:intergenic 45.0%
TGCTTGAACCCTTAGAGCAA+AGG - chr3_2:89779279-89779298 Msa0436310:five_prime_UTR 45.0%
GCTTGAACCCTTAGAGCAAA+GGG - chr3_2:89779280-89779299 Msa0436310:five_prime_UTR 45.0%
CTTTCGTCCCTTTGCTCTAA+GGG + chr3_2:89779290-89779309 None:intergenic 45.0%
ACTTTCGTCCCTTTGCTCTA+AGG + chr3_2:89779291-89779310 None:intergenic 45.0%
!! TATATATAATTAATTAAGTT+TGG + chr3_2:89773623-89773642 None:intergenic 5.0%
!! TTTATTGTTATATAAATTTA+AGG - chr3_2:89774022-89774041 Msa0436310:intron 5.0%
!! TTTATATAACAATAAAAAAA+GGG + chr3_2:89774145-89774164 None:intergenic 5.0%
!! ATTTATATAACAATAAAAAA+AGG + chr3_2:89774146-89774165 None:intergenic 5.0%
!! ACATATTTATATAAAAATAA+AGG + chr3_2:89778780-89778799 None:intergenic 5.0%
!!! TTTTATATAAATATGTTATA+CGG - chr3_2:89778784-89778803 Msa0436310:five_prime_UTR 5.0%
GAGGTAGAGAGAGTGAGATG+AGG + chr3_2:89773083-89773102 None:intergenic 50.0%
! AATTGCTGTTGTTGAGGGGG+AGG + chr3_2:89773176-89773195 None:intergenic 50.0%
!! GTTTTGGCGGAGAAGGTGAA+AGG + chr3_2:89773241-89773260 None:intergenic 50.0%
!! TAGGAGTGATGACTCGGTCA+GGG + chr3_2:89773312-89773331 None:intergenic 50.0%
GTGACCTAGGAGTGATGACT+CGG + chr3_2:89773318-89773337 None:intergenic 50.0%
AGTCATCACTCCTAGGTCAC+AGG - chr3_2:89773318-89773337 Msa0436310:three_prime_UTR 50.0%
GCATTGAAGTCCTGTGACCT+AGG + chr3_2:89773331-89773350 None:intergenic 50.0%
GTCCCTATGGTTACGCCATT+TGG - chr3_2:89773422-89773441 Msa0436310:CDS 50.0%
!! TCTGACACTATGGGCTGGTT+TGG + chr3_2:89773972-89773991 None:intergenic 50.0%
TCTGATCTGACACTATGGGC+TGG + chr3_2:89773977-89773996 None:intergenic 50.0%
CTAAAGCTCCCTCATACGCA+GGG + chr3_2:89774110-89774129 None:intergenic 50.0%
ACTAAAGCTCCCTCATACGC+AGG + chr3_2:89774111-89774130 None:intergenic 50.0%
! ATGAGGGAGCTTTAGTGCAC+CGG - chr3_2:89774115-89774134 Msa0436310:CDS 50.0%
!! CGCTTGTACTTGGGTTAGTG+CGG - chr3_2:89774303-89774322 Msa0436310:intron 50.0%
AGTGACAATTGGGGGTGGAA+AGG - chr3_2:89774600-89774619 Msa0436310:intron 50.0%
GGAACTTGAAGAGAAGCTCG+TGG - chr3_2:89774621-89774640 Msa0436310:intron 50.0%
CCTGCCACAGCCTCAAAAAA+TGG + chr3_2:89774789-89774808 None:intergenic 50.0%
!!! CCATTTTTTGAGGCTGTGGC+AGG - chr3_2:89774786-89774805 Msa0436310:intron 50.0%
GAGGAAGATCACGGTAGCTA+TGG + chr3_2:89774861-89774880 None:intergenic 50.0%
CTGAAGCCCGTTCATTCAAC+AGG + chr3_2:89774973-89774992 None:intergenic 50.0%
! GTTGAATGAACGGGCTTCAG+TGG - chr3_2:89774973-89774992 Msa0436310:intron 50.0%
TGCTCATGCAACTCCAGAAG+AGG - chr3_2:89775073-89775092 Msa0436310:intron 50.0%
!! CACGGGAAAAGTTTTGGCCA+AGG + chr3_2:89775369-89775388 None:intergenic 50.0%
!! TTCCCGTGCCTTTGAAACAC+AGG - chr3_2:89775381-89775400 Msa0436310:intron 50.0%
! GACCTGTGTTTCAAAGGCAC+GGG + chr3_2:89775386-89775405 None:intergenic 50.0%
TGGATGCTGCAGCCACTAAA+AGG + chr3_2:89776315-89776334 None:intergenic 50.0%
!! GGAGGCATCATCATGGTACA+TGG - chr3_2:89776559-89776578 Msa0436310:intron 50.0%
! TGCACCGATACAGGTATGGT+TGG - chr3_2:89776615-89776634 Msa0436310:intron 50.0%
!! ATATGGGACAGAGTGTTGGG+CGG - chr3_2:89776755-89776774 Msa0436310:intron 50.0%
AAAACCCGGCTTAGGTGGTT+TGG - chr3_2:89776920-89776939 Msa0436310:intron 50.0%
AAACCCGGCTTAGGTGGTTT+GGG - chr3_2:89776921-89776940 Msa0436310:intron 50.0%
TGCTGTGCATTGCCTGGTTT+AGG - chr3_2:89777756-89777775 Msa0436310:five_prime_UTR 50.0%
TGTGCATTGCCTGGTTTAGG+TGG - chr3_2:89777759-89777778 Msa0436310:five_prime_UTR 50.0%
GACTCAGATCAAAGAACCCC+TGG - chr3_2:89777888-89777907 Msa0436310:intron 50.0%
CAGATCAAAGAACCCCTGGA+TGG - chr3_2:89777892-89777911 Msa0436310:intron 50.0%
! GTGGAAGTGTGGTGATATCC+AGG - chr3_2:89778113-89778132 Msa0436310:intron 50.0%
CTTCCCAGGAATATCTCTCC+TGG + chr3_2:89778134-89778153 None:intergenic 50.0%
AACACTTTCCCTTGCTTCCC+AGG + chr3_2:89778148-89778167 None:intergenic 50.0%
!! GGGAAGCAAGGGAAAGTGTT+TGG - chr3_2:89778148-89778167 Msa0436310:intron 50.0%
GGCATGAACATGTGTGCGAT+GGG + chr3_2:89778597-89778616 None:intergenic 50.0%
TGGCATGAACATGTGTGCGA+TGG + chr3_2:89778598-89778617 None:intergenic 50.0%
! ATTTGCCTGTTTGCTGGGGA+TGG + chr3_2:89778618-89778637 None:intergenic 50.0%
TCACAAGGCAAATGGGCAAG+GGG - chr3_2:89778720-89778739 Msa0436310:intron 50.0%
AGGAGATCCTGCTGAAGAAG+TGG - chr3_2:89778974-89778993 Msa0436310:five_prime_UTR 50.0%
TTGTTGAGGGGGAGGAGAAG+AGG + chr3_2:89773168-89773187 None:intergenic 55.0%
GGCGGAGAATGATTGGGGAA+CGG + chr3_2:89773204-89773223 None:intergenic 55.0%
!! AGGTGAAAGGTTGGTGACGG+CGG + chr3_2:89773228-89773247 None:intergenic 55.0%
TGGCGGAGAAGGTGAAAGGT+TGG + chr3_2:89773237-89773256 None:intergenic 55.0%
!!! TGCAGTGGTTTTGGCGGAGA+AGG + chr3_2:89773248-89773267 None:intergenic 55.0%
!!! CTCTGCTGCAGTGGTTTTGG+CGG + chr3_2:89773254-89773273 None:intergenic 55.0%
!! CGAGTTGTCGACTCGGTCTT+TGG + chr3_2:89773278-89773297 None:intergenic 55.0%
!! CTAGGAGTGATGACTCGGTC+AGG + chr3_2:89773313-89773332 None:intergenic 55.0%
CTGACCGAGTCATCACTCCT+AGG - chr3_2:89773311-89773330 Msa0436310:three_prime_UTR 55.0%
GGTCACAGGACTTCAATGCG+TGG - chr3_2:89773332-89773351 Msa0436310:three_prime_UTR 55.0%
CGCCATTTGGGAAGCCATTC+AGG - chr3_2:89773435-89773454 Msa0436310:CDS 55.0%
! TGAGGGAGCTTTAGTGCACC+GGG - chr3_2:89774116-89774135 Msa0436310:CDS 55.0%
GCAGTAGTGACAATTGGGGG+TGG - chr3_2:89774595-89774614 Msa0436310:intron 55.0%
!! GTTTTGGCCAAGGTTGTGGC+TGG + chr3_2:89775359-89775378 None:intergenic 55.0%
GTCATCTATTGCGGGACGGA+GGG + chr3_2:89775874-89775893 None:intergenic 55.0%
AGTCATCTATTGCGGGACGG+AGG + chr3_2:89775875-89775894 None:intergenic 55.0%
GCAGCTGCATCCTCGTTGAA+AGG + chr3_2:89776449-89776468 None:intergenic 55.0%
AGACGGTGAAAACCCGGCTT+AGG - chr3_2:89776912-89776931 Msa0436310:intron 55.0%
ATGCCCAAACCACCTAAGCC+GGG + chr3_2:89776927-89776946 None:intergenic 55.0%
CATGCCCAAACCACCTAAGC+CGG + chr3_2:89776928-89776947 None:intergenic 55.0%
! GGTGGTTTGGGCATGTAGAG+AGG - chr3_2:89776933-89776952 Msa0436310:intron 55.0%
CTAAGTGGTGGTCGGCTACA+TGG + chr3_2:89777123-89777142 None:intergenic 55.0%
TGTAGCCGACCACCACTTAG+TGG - chr3_2:89777123-89777142 Msa0436310:five_prime_UTR 55.0%
AGCTCATGCTGTGCATTGCC+TGG - chr3_2:89777750-89777769 Msa0436310:five_prime_UTR 55.0%
ACTTCCACTAGACACGTCCC+GGG + chr3_2:89778101-89778120 None:intergenic 55.0%
CACTTCCACTAGACACGTCC+CGG + chr3_2:89778102-89778121 None:intergenic 55.0%
GGACGTGTCTAGTGGAAGTG+TGG - chr3_2:89778102-89778121 Msa0436310:intron 55.0%
TCATGCCATCCCCAGCAAAC+AGG - chr3_2:89778610-89778629 Msa0436310:intron 55.0%
!! GCGGTGGCGGAGAATGATTG+GGG + chr3_2:89773209-89773228 None:intergenic 60.0%
!! GGCGGTGGCGGAGAATGATT+GGG + chr3_2:89773210-89773229 None:intergenic 60.0%
!! TGAAAGGTTGGTGACGGCGG+TGG + chr3_2:89773225-89773244 None:intergenic 60.0%
CGCCAAAACCACTGCAGCAG+AGG - chr3_2:89773252-89773271 Msa0436310:three_prime_UTR 60.0%
! GGCCTCTGCTGCAGTGGTTT+TGG + chr3_2:89773257-89773276 None:intergenic 60.0%
GTCTTTGGCCTCTGCTGCAG+TGG + chr3_2:89773263-89773282 None:intergenic 60.0%
! GCAGATTACGGTCCGGTTCG+CGG - chr3_2:89773385-89773404 Msa0436310:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr3_2:89774083-89774102 Msa0436310:intron 60.0%
TCATACGCAGGGTCCGGGAA+GGG + chr3_2:89774099-89774118 None:intergenic 60.0%
TTCCCGGACCCTGCGTATGA+GGG - chr3_2:89774099-89774118 Msa0436310:intron 60.0%
GCAGGAACCAGCCACAACCT+TGG - chr3_2:89775349-89775368 Msa0436310:intron 60.0%
CGGTGAAAACCCGGCTTAGG+TGG - chr3_2:89776915-89776934 Msa0436310:intron 60.0%
CTTCCACTAGACACGTCCCG+GGG + chr3_2:89778100-89778119 None:intergenic 60.0%
!! CGGCGGTGGCGGAGAATGAT+TGG + chr3_2:89773211-89773230 None:intergenic 65.0%
!! AAGGTTGGTGACGGCGGTGG+CGG + chr3_2:89773222-89773241 None:intergenic 65.0%
! CGGTCCGGTTCGCGGTACAA+TGG - chr3_2:89773393-89773412 Msa0436310:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr3_2:89774085-89774104 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr3_2:89774098-89774117 None:intergenic 65.0%
CTCATACGCAGGGTCCGGGA+AGG + chr3_2:89774100-89774119 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+AGG - chr3_2:89774098-89774117 Msa0436310:intron 65.0%
CTCCCTCATACGCAGGGTCC+GGG + chr3_2:89774104-89774123 None:intergenic 65.0%
GCTCCCTCATACGCAGGGTC+CGG + chr3_2:89774105-89774124 None:intergenic 65.0%
GCAAATGGGCAAGGGGCCCT+TGG - chr3_2:89778727-89778746 Msa0436310:intron 65.0%
CAAGGGGCCCTTGGTCTGCT+AGG - chr3_2:89778736-89778755 Msa0436310:intron 65.0%
GGTCCCCGGGACGTGTCTAG+TGG - chr3_2:89778094-89778113 Msa0436310:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 89773063 89779311 89773063 ID=Msa0436310;Name=Msa0436310
chr3_2 mRNA 89773063 89779311 89773063 ID=Msa0436310-mRNA-1;Parent=Msa0436310;Name=Msa0436310-mRNA-1;_AED=0.09;_eAED=0.09;_QI=1146|1|1|1|0.9|1|11|292|182
chr3_2 exon 89773063 89773496 89773063 ID=Msa0436310-mRNA-1:exon:26682;Parent=Msa0436310-mRNA-1
chr3_2 exon 89773617 89773700 89773617 ID=Msa0436310-mRNA-1:exon:26681;Parent=Msa0436310-mRNA-1
chr3_2 exon 89774105 89774304 89774105 ID=Msa0436310-mRNA-1:exon:26680;Parent=Msa0436310-mRNA-1
chr3_2 exon 89774436 89774596 89774436 ID=Msa0436310-mRNA-1:exon:26679;Parent=Msa0436310-mRNA-1
chr3_2 exon 89775747 89775884 89775747 ID=Msa0436310-mRNA-1:exon:26678;Parent=Msa0436310-mRNA-1
chr3_2 exon 89776972 89777178 89776972 ID=Msa0436310-mRNA-1:exon:26677;Parent=Msa0436310-mRNA-1
chr3_2 exon 89777268 89777381 89777268 ID=Msa0436310-mRNA-1:exon:26676;Parent=Msa0436310-mRNA-1
chr3_2 exon 89777480 89777566 89777480 ID=Msa0436310-mRNA-1:exon:26675;Parent=Msa0436310-mRNA-1
chr3_2 exon 89777732 89777842 89777732 ID=Msa0436310-mRNA-1:exon:26674;Parent=Msa0436310-mRNA-1
chr3_2 exon 89778769 89778825 89778769 ID=Msa0436310-mRNA-1:exon:26673;Parent=Msa0436310-mRNA-1
chr3_2 exon 89778918 89779311 89778918 ID=Msa0436310-mRNA-1:exon:26672;Parent=Msa0436310-mRNA-1
chr3_2 five_prime_UTR 89778918 89779311 89778918 ID=Msa0436310-mRNA-1:five_prime_utr;Parent=Msa0436310-mRNA-1
chr3_2 five_prime_UTR 89778769 89778825 89778769 ID=Msa0436310-mRNA-1:five_prime_utr;Parent=Msa0436310-mRNA-1
chr3_2 five_prime_UTR 89777732 89777842 89777732 ID=Msa0436310-mRNA-1:five_prime_utr;Parent=Msa0436310-mRNA-1
chr3_2 five_prime_UTR 89777480 89777566 89777480 ID=Msa0436310-mRNA-1:five_prime_utr;Parent=Msa0436310-mRNA-1
chr3_2 five_prime_UTR 89777268 89777381 89777268 ID=Msa0436310-mRNA-1:five_prime_utr;Parent=Msa0436310-mRNA-1
chr3_2 five_prime_UTR 89776972 89777178 89776972 ID=Msa0436310-mRNA-1:five_prime_utr;Parent=Msa0436310-mRNA-1
chr3_2 five_prime_UTR 89775747 89775884 89775747 ID=Msa0436310-mRNA-1:five_prime_utr;Parent=Msa0436310-mRNA-1
chr3_2 five_prime_UTR 89774559 89774596 89774559 ID=Msa0436310-mRNA-1:five_prime_utr;Parent=Msa0436310-mRNA-1
chr3_2 CDS 89774436 89774558 89774436 ID=Msa0436310-mRNA-1:cds;Parent=Msa0436310-mRNA-1
chr3_2 CDS 89774105 89774304 89774105 ID=Msa0436310-mRNA-1:cds;Parent=Msa0436310-mRNA-1
chr3_2 CDS 89773617 89773700 89773617 ID=Msa0436310-mRNA-1:cds;Parent=Msa0436310-mRNA-1
chr3_2 CDS 89773355 89773496 89773355 ID=Msa0436310-mRNA-1:cds;Parent=Msa0436310-mRNA-1
chr3_2 three_prime_UTR 89773063 89773354 89773063 ID=Msa0436310-mRNA-1:three_prime_utr;Parent=Msa0436310-mRNA-1
Gene Sequence

>Msa0436310

ATGGAAGTTCTTAGTGCAGCATTGTCTGTAAAAGAAGCTCTTCAAAGCTCTGGCGTTAAAGTAAAACTTGATGACTCAGATCAAAGAACCCCTGGATGGAAATTCAATTTCTGGGAAATGAAGGGAGTTCCTCTTAGAATTGAAATTGGTCCCCGGGACGTGTCTAGTGGAAGTGTGGTGATATCCAGGAGAGATATTCCTGGGAAGCAAGGGAAAGTGTTTGGAATCTCTATGGAGCCTTCAATTTTGGAGGTGTATGTTAAAGACAAGTTGGACGAGATACAGTCTTCTCTTTTGGAGAGGGCAATTGCATTTCGAGATAGTAATATTGTAGATGTGAGCACATACGAAGATCTTAAATCTGCAATATCACAAGGCAAATGGGCAAGGGGCCCTTGGTCTGCTAGCGATGAAGATGAGTTAAAAGTGAAAGAGGAAACTGGAGCAACTATCAGGTGTTTTCCATTTGAACAGCCACAAGGGATTAAAAGATGTTTGATGACAGGAGATCCTGCTGAAGAAGTGGCTATTTTTGCCAAATCTTACTAA

Protein sequence

>Msa0436310

MEVLSAALSVKEALQSSGVKVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRDIPGKQGKVFGISMEPSILEVYVKDKLDEIQSSLLERAIAFRDSNIVDVSTYEDLKSAISQGKWARGPWSASDEDELKVKEETGATIRCFPFEQPQGIKRCLMTGDPAEEVAIFAKSY*