AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1269550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269550 MtrunA17_Chr3g0133261 99.330 448 3 0 1 448 95 542 0.0 927
Msa1269550 MtrunA17_Chr7g0270811 41.886 456 250 6 2 448 80 529 3.12e-128 381
Msa1269550 MtrunA17_Chr3g0143341 36.789 492 259 7 2 448 39 523 6.32e-108 329
Msa1269550 MtrunA17_Chr3g0143331 33.333 441 192 9 2 400 21 401 1.04e-75 242
Msa1269550 MtrunA17_Chr3g0096421 34.796 319 192 5 139 448 8 319 8.70e-58 192
Msa1269550 MtrunA17_Chr3g0096431 41.509 106 62 0 2 107 45 150 8.75e-25 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269550 AT5G52520.1 87.946 448 54 0 1 448 96 543 0.0 823
Msa1269550 AT3G62120.3 42.325 456 248 7 2 448 68 517 1.41e-125 374
Msa1269550 AT3G62120.2 42.325 456 248 7 2 448 81 530 1.70e-125 375
Msa1269550 AT3G62120.1 42.325 456 248 7 2 448 81 530 1.70e-125 375
Msa1269550 AT5G10880.1 36.245 229 125 5 234 448 88 309 7.74e-31 121

Find 162 sgRNAs with CRISPR-Local

Find 440 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTAATAATATGATTTA+TGG 0.079203 8_3:+2766102 Msa1269550:three_prime_UTR
CTCTATGGAGCCTTCAATTT+TGG 0.135831 8_3:+2765228 Msa1269550:CDS
CTGGATGGAAATTCAATTTC+TGG 0.137157 8_3:+2764961 Msa1269550:CDS
CGCCATTTGGGAAGCCATTC+AGG 0.220881 8_3:+2760485 Msa1269550:CDS
TCATCATCCTTCTTCCAAAT+TGG 0.238394 8_3:-2764843 None:intergenic
CGAGATACAGTCTTCTCTTT+TGG 0.245617 8_3:+2765276 Msa1269550:CDS
TTAGAACTCTTGAATTTCTT+TGG 0.246752 8_3:+2762087 Msa1269550:CDS
GGCCTCTGCTGCAGTGGTTT+TGG 0.247674 8_3:-2760304 None:intergenic
ACTTGCTTCTTTCTCTATAA+AGG 0.261830 8_3:-2761596 None:intergenic
CAAAGGCACGGGAAAAGTTT+TGG 0.265297 8_3:-2762423 None:intergenic
ACTTTCGTCCCTTTGCTCTA+AGG 0.265320 8_3:-2766342 None:intergenic
CTTGCAGAGTTAGTAAGATT+TGG 0.279485 8_3:-2766060 None:intergenic
GTCCCTATGGTTACGCCATT+TGG 0.281205 8_3:+2760472 Msa1269550:CDS
TGAGTTGTCGACTCGGTCTT+TGG 0.289147 8_3:-2760325 None:intergenic
ATGGACAAAGGGAATATATT+TGG 0.290677 8_3:+2763556 Msa1269550:CDS
ACTTAGGCAAAAGTTGTATA+AGG 0.293929 8_3:+2766187 Msa1269550:three_prime_UTR
ACCTGTATCGGTGCAATCTT+TGG 0.300338 8_3:-2763660 None:intergenic
GTTCCTCTTAGAATTGAAAT+TGG 0.310395 8_3:+2765127 Msa1269550:CDS
CGGCGGTGGCGGAGAATGAT+TGG 0.327896 8_3:-2760252 None:intergenic
TTTCTAATAATATGATTTAT+GGG 0.331996 8_3:+2766103 Msa1269550:three_prime_UTR
ATCCCTTGTGGCTGTTCAAA+TGG 0.354235 8_3:-2765987 None:intergenic
GGGCAATTGCATTTCGAGAT+AGG 0.356660 8_3:+2765302 Msa1269550:CDS
AGGTGGTAATTGTACCAATT+TGG 0.362681 8_3:+2764829 Msa1269550:intron
CAAGGGGCCCTTGGTCTGCT+AGG 0.366722 8_3:+2765790 Msa1269550:CDS
AGCTGCCATACCTGTTATTA+CGG 0.369384 8_3:+2762291 Msa1269550:CDS
CTTGAATTTCTTTGGCAAGA+AGG 0.374606 8_3:+2762095 Msa1269550:CDS
AACACTTTCCCTTGCTTCCC+AGG 0.380427 8_3:-2765199 None:intergenic
GTGCAGTTCACAGATGAAAA+TGG 0.386375 8_3:+2763537 Msa1269550:intron
GGCGGTGGCGGAGAATGATT+GGG 0.387864 8_3:-2760251 None:intergenic
TCTTCCTCTCTTGATTAATC+AGG 0.388403 8_3:+2761924 Msa1269550:CDS
TCCCTATGGTTACGCCATTT+GGG 0.391559 8_3:+2760473 Msa1269550:CDS
TCCAAAGATTGCACCGATAC+AGG 0.393092 8_3:+2763659 Msa1269550:CDS
TTCACAATGGTTTCACTTGT+AGG 0.397403 8_3:-2761865 None:intergenic
GAAAGTGTTTGGAATCTCTA+TGG 0.397700 8_3:+2765213 Msa1269550:CDS
AGGAAACTGGAGCAACTATC+AGG 0.398901 8_3:+2765958 Msa1269550:CDS
CTGCAATATCACAAGGCAAA+TGG 0.399141 8_3:+2765766 Msa1269550:CDS
CAATCTTTGGAGGAAGCATT+AGG 0.399281 8_3:-2763647 None:intergenic
AGTTAGCAGTAGTGACAATT+GGG 0.403138 8_3:+2761641 Msa1269550:CDS
AGCTTGTTCAAAAGCAAATC+TGG 0.405332 8_3:-2762272 None:intergenic
ATTCAATTTCTGGGAAATGA+AGG 0.410990 8_3:+2764971 Msa1269550:CDS
CTTTCGTCCCTTTGCTCTAA+GGG 0.412454 8_3:-2766341 None:intergenic
CGGACCGTAATCTGCTAATT+CGG 0.418329 8_3:-2760427 None:intergenic
GCAAATGGGCAAGGGGCCCT+TGG 0.418567 8_3:+2765781 Msa1269550:CDS
AATATATTTGGCAGACATCA+TGG 0.419041 8_3:+2763568 Msa1269550:CDS
GGGAAGCAAGGGAAAGTGTT+TGG 0.420165 8_3:+2765202 Msa1269550:CDS
TTAAAAGTGAAAGAGGAAAC+TGG 0.421097 8_3:+2765945 Msa1269550:CDS
CAGAAATTGAATTTCCATCC+AGG 0.425508 8_3:-2764960 None:intergenic
ATAACCATTGTACCGCGAAC+CGG 0.425988 8_3:-2760447 None:intergenic
TGGATGGAAATTCAATTTCT+GGG 0.428325 8_3:+2764962 Msa1269550:CDS
ACATACACCTCCAAAATTGA+AGG 0.437424 8_3:-2765238 None:intergenic
TGCAATATCACAAGGCAAAT+GGG 0.439132 8_3:+2765767 Msa1269550:CDS
AATTCAAGAGTTCTAACAAA+TGG 0.442257 8_3:-2762080 None:intergenic
GAGTTAGCAGTAGTGACAAT+TGG 0.442737 8_3:+2761640 Msa1269550:CDS
TGAAAGGTTGGTGACGGCGG+TGG 0.445524 8_3:-2760266 None:intergenic
TAATAATATGATTTATGGGT+GGG 0.449328 8_3:+2766107 Msa1269550:three_prime_UTR
AATGTCAAGTTCAAGGAGAC+TGG 0.459172 8_3:+2760608 Msa1269550:CDS
TCTAAAGTGGAAACATTTGC+TGG 0.460420 8_3:+2762322 Msa1269550:CDS
GTGGAAGTGTGGTGATATCC+AGG 0.467177 8_3:+2765167 Msa1269550:CDS
ATTAAAAGATGTTTGATGAC+AGG 0.474053 8_3:+2766008 Msa1269550:CDS
ACAATGGTTATTCGTCCCTA+TGG 0.476175 8_3:+2760459 Msa1269550:exon
CTAGGAGTGATGACTCGGTC+AGG 0.476493 8_3:-2760360 None:intergenic
TCTTTCTCTATAAAGGAGTA+AGG 0.477392 8_3:-2761589 None:intergenic
AGATGAGTTAAAAGTGAAAG+AGG 0.477450 8_3:+2765938 Msa1269550:CDS
AATTGTACCAATTTGGAAGA+AGG 0.481601 8_3:+2764836 Msa1269550:CDS
CTTCCCAGGAATATCTCTCC+TGG 0.482230 8_3:-2765185 None:intergenic
CACAGATGAAAATGGACAAA+GGG 0.483190 8_3:+2763545 Msa1269550:CDS
AAAGAAGCTCTTCAAAGCTC+TGG 0.483538 8_3:+2764900 Msa1269550:CDS
GCTTGAACCCTTAGAGCAAA+GGG 0.484129 8_3:+2766334 Msa1269550:three_prime_UTR
CACTTCCACTAGACACGTCC+CGG 0.484364 8_3:-2765153 None:intergenic
TTATTTGAATGTCAAGTTCA+AGG 0.486269 8_3:+2760601 Msa1269550:CDS
GTCTTTGGCCTCTGCTGCAG+TGG 0.486813 8_3:-2760310 None:intergenic
AAGGTTGGTGACGGCGGTGG+CGG 0.488368 8_3:-2760263 None:intergenic
AACCTGAATGGCTTCCCAAA+TGG 0.497397 8_3:-2760487 None:intergenic
GCAGATTACGGTCCGGTTCG+CGG 0.498963 8_3:+2760435 Msa1269550:five_prime_UTR
GCTGCCATACCTGTTATTAC+GGG 0.500792 8_3:+2762292 Msa1269550:CDS
GGACCAATTTCAATTCTAAG+AGG 0.507990 8_3:-2765130 None:intergenic
CTACACGATTGAGGCAATGA+TGG 0.509021 8_3:+2762357 Msa1269550:CDS
GAGGAAGATCACGGTAGCTA+TGG 0.509612 8_3:-2761909 None:intergenic
GACTCAGATCAAAGAACCCC+TGG 0.510899 8_3:+2764942 Msa1269550:CDS
AAAGAAGCAAGTCATGTTGA+GGG 0.511967 8_3:+2761607 Msa1269550:CDS
CGCCAAAACCACTGCAGCAG+AGG 0.513327 8_3:+2760302 Msa1269550:five_prime_UTR
AAAATAGCCACTTCTTCAGC+AGG 0.513654 8_3:-2766035 None:intergenic
CTTAGGCAAAAGTTGTATAA+GGG 0.514326 8_3:+2766188 Msa1269550:three_prime_UTR
AGAGATATTCCTGGGAAGCA+AGG 0.516068 8_3:+2765190 Msa1269550:CDS
AGAAGGTGGCGGTGAAAGGT+TGG 0.519073 8_3:-2760278 None:intergenic
GCGGAGAAGGTGGCGGTGAA+AGG 0.520115 8_3:-2760282 None:intergenic
GGTGTATGTTAAAGACAAGT+TGG 0.524044 8_3:+2765252 Msa1269550:CDS
TAGAATTGAAATTGGTCCCC+GGG 0.525862 8_3:+2765135 Msa1269550:CDS
TTCCCAAATGGCGTAACCAT+AGG 0.529134 8_3:-2760475 None:intergenic
AATGCCGAATTAGCAGATTA+CGG 0.529226 8_3:+2760423 Msa1269550:five_prime_UTR
CTGACCGAGTCATCACTCCT+AGG 0.534702 8_3:+2760361 Msa1269550:five_prime_UTR
GCATTGAAGTCCTGTGACCT+AGG 0.538432 8_3:-2760378 None:intergenic
TATCACAAGGCAAATGGGCA+AGG 0.539052 8_3:+2765772 Msa1269550:CDS
TCGACCCGTAATAACAGGTA+TGG 0.539172 8_3:-2762296 None:intergenic
TCCAGAAGAGGCAGAAAATG+AGG 0.539198 8_3:+2762136 Msa1269550:CDS
GTAATCTGCTAATTCGGCAT+TGG 0.539992 8_3:-2760421 None:intergenic
TGCTTGAACCCTTAGAGCAA+AGG 0.540304 8_3:+2766333 Msa1269550:three_prime_UTR
TCCCAAATGGCGTAACCATA+GGG 0.541410 8_3:-2760474 None:intergenic
AGAAATTGAATTTCCATCCA+GGG 0.544417 8_3:-2764959 None:intergenic
TGTATCGGTGCAATCTTTGG+AGG 0.548894 8_3:-2763657 None:intergenic
TACGGGTCGAAAATCTAAAG+TGG 0.549532 8_3:+2762309 Msa1269550:CDS
GAAAGAAGCAAGTCATGTTG+AGG 0.549877 8_3:+2761606 Msa1269550:CDS
AGTGGGCAAATGTCACAAGA+TGG 0.552413 8_3:+2762042 Msa1269550:intron
TTCCCGTGCCTTTGAAACAC+AGG 0.553524 8_3:+2762432 Msa1269550:CDS
GACAAGAAAGCATTGCAAGC+AGG 0.555118 8_3:+2762382 Msa1269550:CDS
ATCACAAGGCAAATGGGCAA+GGG 0.555350 8_3:+2765773 Msa1269550:CDS
AGGAAGTAGAGAGTGAGATG+AGG 0.555552 8_3:-2760127 None:intergenic
GCATCAGACCTGTGTTTCAA+AGG 0.556209 8_3:-2762440 None:intergenic
TGCTCATGCAACTCCAGAAG+AGG 0.559996 8_3:+2762124 Msa1269550:CDS
TTAATTTCTTGTTACCACTT+AGG 0.560972 8_3:+2766171 Msa1269550:three_prime_UTR
GCATCCAACCATACCTGTAT+CGG 0.561155 8_3:-2763672 None:intergenic
AGACCTGTGTTTCAAAGGCA+CGG 0.561432 8_3:-2762435 None:intergenic
GACCTGTGTTTCAAAGGCAC+GGG 0.565333 8_3:-2762434 None:intergenic
GAGATATTCCTGGGAAGCAA+GGG 0.565396 8_3:+2765191 Msa1269550:CDS
GGTCCCCGGGACGTGTCTAG+TGG 0.566931 8_3:+2765148 Msa1269550:CDS
CTAATAATATGATTTATGGG+TGG 0.568766 8_3:+2766106 Msa1269550:three_prime_UTR
GGAGGCATCATCATGGTACA+TGG 0.569062 8_3:+2763612 Msa1269550:CDS
GAAATTGAATTTCCATCCAG+GGG 0.569742 8_3:-2764958 None:intergenic
CAATGGTTTCACTTGTAGGT+CGG 0.569797 8_3:-2761861 None:intergenic
TTAGAATTGAAATTGGTCCC+CGG 0.570679 8_3:+2765134 Msa1269550:CDS
ACTTCCACTAGACACGTCCC+GGG 0.571135 8_3:-2765152 None:intergenic
ATATCCAGGAGAGATATTCC+TGG 0.571372 8_3:+2765181 Msa1269550:CDS
AGGAGATCCTGCTGAAGAAG+TGG 0.571589 8_3:+2766028 Msa1269550:CDS
CGGTGAAAGGTTGGTGACGG+CGG 0.571786 8_3:-2760269 None:intergenic
GTGGGCAAATGTCACAAGAT+GGG 0.573271 8_3:+2762043 Msa1269550:intron
GCAGGAACCAGCCACAACCT+TGG 0.576341 8_3:+2762400 Msa1269550:CDS
ATATATTTGGCAGACATCAT+GGG 0.579832 8_3:+2763569 Msa1269550:CDS
CGGTCCGGTTCGCGGTACAA+TGG 0.585347 8_3:+2760443 Msa1269550:exon
TTTACCTGATTAATCAAGAG+AGG 0.586404 8_3:-2761928 None:intergenic
AGTCATCACTCCTAGGTCAC+AGG 0.587801 8_3:+2760368 Msa1269550:five_prime_UTR
ATTGTCACTACTGCTAACTC+TGG 0.591910 8_3:-2761637 None:intergenic
CAGATCAAAGAACCCCTGGA+TGG 0.591928 8_3:+2764946 Msa1269550:CDS
TATCCAGGAGAGATATTCCT+GGG 0.592768 8_3:+2765182 Msa1269550:CDS
TACACGATTGAGGCAATGAT+GGG 0.595098 8_3:+2762358 Msa1269550:CDS
CGAATTAGCAGATTACGGTC+CGG 0.596537 8_3:+2760428 Msa1269550:five_prime_UTR
TCACAAGGCAAATGGGCAAG+GGG 0.599892 8_3:+2765774 Msa1269550:CDS
CTTAAATCTGCAATATCACA+AGG 0.602226 8_3:+2765759 Msa1269550:CDS
TCACAGATGAAAATGGACAA+AGG 0.608406 8_3:+2763544 Msa1269550:CDS
TTCCATTTGAACAGCCACAA+GGG 0.611470 8_3:+2765985 Msa1269550:CDS
TTTCCATTTGAACAGCCACA+AGG 0.612338 8_3:+2765984 Msa1269550:CDS
CTTGAGAGACACCATTTGTG+TGG 0.613060 8_3:-2760170 None:intergenic
GATTCTTTGAGTTGTCGACT+CGG 0.615447 8_3:-2760332 None:intergenic
TTGTAAGACCTACACGATTG+AGG 0.616283 8_3:+2762348 Msa1269550:CDS
ATGGTACATGGAGATGATGC+TGG 0.617498 8_3:+2763624 Msa1269550:CDS
GTGACCTAGGAGTGATGACT+CGG 0.622486 8_3:-2760365 None:intergenic
TGGCGGTGAAAGGTTGGTGA+CGG 0.625593 8_3:-2760272 None:intergenic
GGCGGAGAATGATTGGGGAA+CGG 0.627567 8_3:-2760245 None:intergenic
AACACAACCTAGCAGACCAA+GGG 0.628350 8_3:-2765797 None:intergenic
AGTAAACATGTGATTCACAA+TGG 0.630715 8_3:-2761878 None:intergenic
CATCATTGCCTCAATCGTGT+AGG 0.631552 8_3:-2762356 None:intergenic
TAGGAGTGATGACTCGGTCA+GGG 0.637146 8_3:-2760359 None:intergenic
TGAATCACATGTTTACTCAG+TGG 0.643424 8_3:+2761884 Msa1269550:CDS
AAACACAACCTAGCAGACCA+AGG 0.647106 8_3:-2765798 None:intergenic
TAATCAAGAGAGGAAGATCA+CGG 0.658472 8_3:-2761918 None:intergenic
GTTAGCAGTAGTGACAATTG+GGG 0.660405 8_3:+2761642 Msa1269550:CDS
GGACGTGTCTAGTGGAAGTG+TGG 0.684037 8_3:+2765156 Msa1269550:CDS
GCGGTGGCGGAGAATGATTG+GGG 0.684633 8_3:-2760250 None:intergenic
GGAACTTGAAGAGAAGCTCG+TGG 0.700042 8_3:+2761672 Msa1269550:CDS
CTTCCACTAGACACGTCCCG+GGG 0.711499 8_3:-2765151 None:intergenic
TATTTGGCAGACATCATGGG+CGG 0.711856 8_3:+2763572 Msa1269550:CDS
TTAGCAGTAGTGACAATTGG+GGG 0.717559 8_3:+2761643 Msa1269550:CDS
GGTCACAGGACTTCAATGCG+TGG 0.719791 8_3:+2760382 Msa1269550:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAAATAAA+TGG - chr8_3:2760564-2760583 None:intergenic 0.0%
!! AAAAATTAATAAAAAAAATT+AGG - chr8_3:2765391-2765410 None:intergenic 0.0%
!!! AAGCAAAATTTAAAATTTAA+AGG - chr8_3:2761339-2761358 None:intergenic 10.0%
!! TTTCTAATAATATGATTTAT+GGG + chr8_3:2766103-2766122 Msa1269550:three_prime_UTR 10.0%
!! CAAAAAAATTAAAGTAAAAC+AGG - chr8_3:2760724-2760743 None:intergenic 15.0%
!!! GTGTTATTAAATCAATTATA+TGG + chr8_3:2760750-2760769 Msa1269550:intron 15.0%
!!! TTATCTTTTAGAATCATATA+TGG + chr8_3:2762516-2762535 Msa1269550:intron 15.0%
!!! GTATAATTTTATGACTAATT+TGG - chr8_3:2762901-2762920 None:intergenic 15.0%
!! TGTATATTAGTAGAAAAATA+TGG - chr8_3:2762987-2763006 None:intergenic 15.0%
!! TCATAAGTTTCAATTTAAAT+TGG - chr8_3:2763189-2763208 None:intergenic 15.0%
!!! ATATTATCCATTTTCTTTTA+TGG + chr8_3:2763430-2763449 Msa1269550:intron 15.0%
!!! TATTATCCATTTTCTTTTAT+GGG + chr8_3:2763431-2763450 Msa1269550:intron 15.0%
!! AATAGAGATATAATATATGA+TGG + chr8_3:2764129-2764148 Msa1269550:intron 15.0%
!! TTAATCTTTACCAAATTATA+AGG + chr8_3:2764593-2764612 Msa1269550:intron 15.0%
!! CTTTCTAATAATATGATTTA+TGG + chr8_3:2766102-2766121 Msa1269550:three_prime_UTR 15.0%
!!! TTATTTAGTTTTGTTTGTGT+AGG + chr8_3:2760577-2760596 Msa1269550:intron 20.0%
!! TTTATCTTGTGTTAAAGAAA+TGG - chr8_3:2760836-2760855 None:intergenic 20.0%
!! CAACATAATCTTAAGTAAAA+AGG - chr8_3:2761275-2761294 None:intergenic 20.0%
!!! TTTTAAATTTTGCTTGTACT+TGG + chr8_3:2761344-2761363 Msa1269550:intron 20.0%
!!! TTTAAATTTTGCTTGTACTT+GGG + chr8_3:2761345-2761364 Msa1269550:intron 20.0%
!!! GGTAATGAAATTTTATGTTA+TGG - chr8_3:2761523-2761542 None:intergenic 20.0%
!! AGAAAAACAGTCATAAAAAA+AGG - chr8_3:2761714-2761733 None:intergenic 20.0%
!!! TGTTTTTCTTCACATATTAT+CGG + chr8_3:2761725-2761744 Msa1269550:intron 20.0%
!!! TTTGATTTTTCCATTTTTTG+AGG + chr8_3:2761827-2761846 Msa1269550:intron 20.0%
!!! AATATGAGATTTTTTTTCAC+CGG + chr8_3:2762699-2762718 Msa1269550:intron 20.0%
!! AAATATGGTCAAAATAAGTT+AGG - chr8_3:2762972-2762991 None:intergenic 20.0%
!! AAAAGTTGAGTTATATGATA+TGG - chr8_3:2763290-2763309 None:intergenic 20.0%
!! AAATGAATAAAAACAGAAGT+GGG - chr8_3:2763403-2763422 None:intergenic 20.0%
!! TAAATGAATAAAAACAGAAG+TGG - chr8_3:2763404-2763423 None:intergenic 20.0%
!!! ATTATCCATTTTCTTTTATG+GGG + chr8_3:2763432-2763451 Msa1269550:intron 20.0%
!! TGAGAATCTTATAAAATGAA+AGG - chr8_3:2764646-2764665 None:intergenic 20.0%
!! TTTATAAGATTCTCATTTGA+AGG + chr8_3:2764651-2764670 Msa1269550:intron 20.0%
!! TTATAAGATTCTCATTTGAA+GGG + chr8_3:2764652-2764671 Msa1269550:intron 20.0%
!! TATATTCAGATAGTCAAATA+TGG - chr8_3:2765075-2765094 None:intergenic 20.0%
!!! TATTTTTTTCTTCCAATTTC+AGG + chr8_3:2765102-2765121 Msa1269550:intron 20.0%
!!! ATTTTTTTCTTCCAATTTCA+GGG + chr8_3:2765103-2765122 Msa1269550:intron 20.0%
!! TAATAATATGATTTATGGGT+GGG + chr8_3:2766107-2766126 Msa1269550:three_prime_UTR 20.0%
! AATGGCAAAATGAAAATTGA+AGG - chr8_3:2760546-2760565 None:intergenic 25.0%
! TTATTTGAATGTCAAGTTCA+AGG + chr8_3:2760601-2760620 Msa1269550:CDS 25.0%
! ATAAGTTGTTTATCCAAACA+AGG - chr8_3:2760776-2760795 None:intergenic 25.0%
!!! ACTTATTTTGCAGCTTATAT+AGG + chr8_3:2760790-2760809 Msa1269550:intron 25.0%
! TTTGTAGTGTAAGAATATGA+GGG + chr8_3:2761455-2761474 Msa1269550:intron 25.0%
!!! AAAGTGATATCTTGATAATG+TGG + chr8_3:2761484-2761503 Msa1269550:intron 25.0%
!! GTTTTTCTTCACATATTATC+GGG + chr8_3:2761726-2761745 Msa1269550:intron 25.0%
! AAAATCAAAGACAAAACCTT+AGG - chr8_3:2761816-2761835 None:intergenic 25.0%
!! AATTCAAGAGTTCTAACAAA+TGG - chr8_3:2762083-2762102 None:intergenic 25.0%
! TTAGAACTCTTGAATTTCTT+TGG + chr8_3:2762087-2762106 Msa1269550:CDS 25.0%
! AAGAAAAAAAAATACTCCAC+AGG - chr8_3:2762492-2762511 None:intergenic 25.0%
!!! TTTTTTTCTTCTGTGAGTTA+TGG + chr8_3:2762608-2762627 Msa1269550:intron 25.0%
! TTAAGCTCAAAATTATGCAT+TGG + chr8_3:2763107-2763126 Msa1269550:intron 25.0%
! AATGAATAAAAACAGAAGTG+GGG - chr8_3:2763402-2763421 None:intergenic 25.0%
!! ATTTCTCTTGTAGTTTTTCT+AGG - chr8_3:2764078-2764097 None:intergenic 25.0%
!! TAATATATGATGGAACATTG+AGG + chr8_3:2764139-2764158 Msa1269550:intron 25.0%
! TTTCATACATAACATCCAAT+AGG + chr8_3:2764251-2764270 Msa1269550:intron 25.0%
! TTACATGCAAAATGATTTCA+TGG - chr8_3:2764404-2764423 None:intergenic 25.0%
! AACTTCAGTTAGAGTATATT+CGG + chr8_3:2764514-2764533 Msa1269550:intron 25.0%
! TCATAGCATTCCTTATAATT+TGG - chr8_3:2764606-2764625 None:intergenic 25.0%
! TATATTTGGATGTAGAAGTT+TGG - chr8_3:2764718-2764737 None:intergenic 25.0%
! AAACTTCTACATCCAAATAT+AGG + chr8_3:2764717-2764736 Msa1269550:intron 25.0%
! CATGTAAACTATCCTATATT+TGG - chr8_3:2764732-2764751 None:intergenic 25.0%
!! ACTTGGATAGATTTCATTTT+TGG + chr8_3:2765005-2765024 Msa1269550:intron 25.0%
!!! CTTGGATAGATTTCATTTTT+GGG + chr8_3:2765006-2765025 Msa1269550:intron 25.0%
!!! CAAGTAAAAAGTATCACAAA+AGG - chr8_3:2765334-2765353 None:intergenic 25.0%
!! TTTTACTTGTGATAGACATT+TGG + chr8_3:2765345-2765364 Msa1269550:intron 25.0%
! AAGACTAGAATATATCATTC+AGG - chr8_3:2765429-2765448 None:intergenic 25.0%
!!! CTTCTGAAAAGTATTTAACT+AGG - chr8_3:2765463-2765482 None:intergenic 25.0%
!! CTAGTTAAATACTTTTCAGA+AGG + chr8_3:2765461-2765480 Msa1269550:intron 25.0%
! ATTTAGTGTATTACATAGAG+TGG - chr8_3:2765518-2765537 None:intergenic 25.0%
! AATTCCAATCTCTATTAGAA+AGG + chr8_3:2765580-2765599 Msa1269550:intron 25.0%
! ATTTCCTTTCTAATAGAGAT+TGG - chr8_3:2765587-2765606 None:intergenic 25.0%
! CTATTAGAAAGGAAATCAAT+TGG + chr8_3:2765591-2765610 Msa1269550:intron 25.0%
!! ATTAAAAGATGTTTGATGAC+AGG + chr8_3:2766008-2766027 Msa1269550:CDS 25.0%
! CTAATAATATGATTTATGGG+TGG + chr8_3:2766106-2766125 Msa1269550:three_prime_UTR 25.0%
! TTAATTTCTTGTTACCACTT+AGG + chr8_3:2766171-2766190 Msa1269550:three_prime_UTR 25.0%
!!! TGAGAATTTGCTGTTTTTGA+GGG - chr8_3:2760225-2760244 None:intergenic 30.0%
AGAAAAAGAATGAACCTGAA+TGG - chr8_3:2760502-2760521 None:intergenic 30.0%
! TAGTAACATGTATTTTCCAC+AGG + chr8_3:2760634-2760653 Msa1269550:CDS 30.0%
TGGTAATTAATGTTTACCTG+TGG - chr8_3:2760653-2760672 None:intergenic 30.0%
! TATCTGCAATTTGTTTGCAT+AGG + chr8_3:2760693-2760712 Msa1269550:intron 30.0%
!! ATCAATTATATGGCCTTGTT+TGG + chr8_3:2760760-2760779 Msa1269550:intron 30.0%
TAAGCTATCCTAGTGAATTT+AGG + chr8_3:2760884-2760903 Msa1269550:intron 30.0%
AAGCTATCCTAGTGAATTTA+GGG + chr8_3:2760885-2760904 Msa1269550:intron 30.0%
CTTATTTCCCTAAATTCACT+AGG - chr8_3:2760895-2760914 None:intergenic 30.0%
AATATCTGATCTGACACTAT+GGG - chr8_3:2761031-2761050 None:intergenic 30.0%
AACGTCGAAAAAATTAAGCT+AGG - chr8_3:2761054-2761073 None:intergenic 30.0%
ACAATAAAAAAAGGGTAACC+CGG - chr8_3:2761187-2761206 None:intergenic 30.0%
CTACAAACAGTACAAGATAT+AGG - chr8_3:2761442-2761461 None:intergenic 30.0%
GTTTGTAGTGTAAGAATATG+AGG + chr8_3:2761454-2761473 Msa1269550:intron 30.0%
TCTTTCTCTATAAAGGAGTA+AGG - chr8_3:2761592-2761611 None:intergenic 30.0%
ACTTGCTTCTTTCTCTATAA+AGG - chr8_3:2761599-2761618 None:intergenic 30.0%
AGTAAACATGTGATTCACAA+TGG - chr8_3:2761881-2761900 None:intergenic 30.0%
TTTACCTGATTAATCAAGAG+AGG - chr8_3:2761931-2761950 None:intergenic 30.0%
TTCATTCAACAGGAAAAAAC+AGG - chr8_3:2762014-2762033 None:intergenic 30.0%
!!! GTTTTTTCCTGTTGAATGAA+CGG + chr8_3:2762014-2762033 Msa1269550:intron 30.0%
!!! TTTTTTCCTGTTGAATGAAC+GGG + chr8_3:2762015-2762034 Msa1269550:intron 30.0%
TAGTAACAAATAAGAAGTCG+TGG - chr8_3:2762640-2762659 None:intergenic 30.0%
!! TTACTGAAACTTTGAGTTGA+CGG - chr8_3:2762681-2762700 None:intergenic 30.0%
!!! GCTGTTTTTCTGTAAATAAG+AGG + chr8_3:2762747-2762766 Msa1269550:intron 30.0%
! GTTTTTCTGTAAATAAGAGG+AGG + chr8_3:2762750-2762769 Msa1269550:intron 30.0%
ACAACAATCCTTCCTAAAAT+AGG + chr8_3:2762828-2762847 Msa1269550:intron 30.0%
!! TTGGATTTCCTATTTTAGGA+AGG - chr8_3:2762839-2762858 None:intergenic 30.0%
! CTAGTTGGATTTCCTATTTT+AGG - chr8_3:2762843-2762862 None:intergenic 30.0%
! GTTTTTGTACAAGTGATAGT+AGG - chr8_3:2762867-2762886 None:intergenic 30.0%
TTCAAATGAGTCATCTATTG+CGG - chr8_3:2762934-2762953 None:intergenic 30.0%
TCAACTGTGTCATGTATTAA+GGG + chr8_3:2763144-2763163 Msa1269550:intron 30.0%
GCTTGGATTTATCATAAGTA+GGG - chr8_3:2763254-2763273 None:intergenic 30.0%
ATGATATGGCACAATCAATA+TGG - chr8_3:2763276-2763295 None:intergenic 30.0%
TTGATTAAATCCTTTCAACG+AGG + chr8_3:2763489-2763508 Msa1269550:intron 30.0%
ATGGACAAAGGGAATATATT+TGG + chr8_3:2763556-2763575 Msa1269550:CDS 30.0%
AATATATTTGGCAGACATCA+TGG + chr8_3:2763568-2763587 Msa1269550:CDS 30.0%
ATATATTTGGCAGACATCAT+GGG + chr8_3:2763569-2763588 Msa1269550:CDS 30.0%
TTACATTACTTGTCTGATCA+AGG - chr8_3:2763772-2763791 None:intergenic 30.0%
!! AGATTTGCTACACAAGAATA+TGG + chr8_3:2763791-2763810 Msa1269550:intron 30.0%
!! GATTTGCTACACAAGAATAT+GGG + chr8_3:2763792-2763811 Msa1269550:intron 30.0%
GACCTATAGTTTATGTAGTA+AGG + chr8_3:2764008-2764027 Msa1269550:intron 30.0%
CTCCTTACTACATAAACTAT+AGG - chr8_3:2764013-2764032 None:intergenic 30.0%
! TGAGATCAGATTTTGAATTG+AGG - chr8_3:2764282-2764301 None:intergenic 30.0%
TCATGGAAGAAAATGAATTG+AGG - chr8_3:2764387-2764406 None:intergenic 30.0%
TTCTTAGTGTAATATCTCAC+TGG + chr8_3:2764467-2764486 Msa1269550:intron 30.0%
AATTGTACCAATTTGGAAGA+AGG + chr8_3:2764836-2764855 Msa1269550:CDS 30.0%
GAAGAAGGATGATGAAAAAA+TGG + chr8_3:2764851-2764870 Msa1269550:CDS 30.0%
AGAAATTGAATTTCCATCCA+GGG - chr8_3:2764962-2764981 None:intergenic 30.0%
TGGATGGAAATTCAATTTCT+GGG + chr8_3:2764962-2764981 Msa1269550:CDS 30.0%
! ATTCAATTTCTGGGAAATGA+AGG + chr8_3:2764971-2764990 Msa1269550:CDS 30.0%
CAGAATCAATGTGTACAATT+TGG - chr8_3:2765033-2765052 None:intergenic 30.0%
GTTCCTCTTAGAATTGAAAT+TGG + chr8_3:2765127-2765146 Msa1269550:CDS 30.0%
CTTAAATCTGCAATATCACA+AGG + chr8_3:2765759-2765778 Msa1269550:CDS 30.0%
GTCATTAGAGTTGTTAATCA+TGG - chr8_3:2765893-2765912 None:intergenic 30.0%
AGATGAGTTAAAAGTGAAAG+AGG + chr8_3:2765938-2765957 Msa1269550:CDS 30.0%
TTAAAAGTGAAAGAGGAAAC+TGG + chr8_3:2765945-2765964 Msa1269550:CDS 30.0%
! AAACATCTTTTAATCCCTTG+TGG - chr8_3:2766002-2766021 None:intergenic 30.0%
! TTATACAACTTTTGCCTAAG+TGG - chr8_3:2766188-2766207 None:intergenic 30.0%
ACTTAGGCAAAAGTTGTATA+AGG + chr8_3:2766187-2766206 Msa1269550:three_prime_UTR 30.0%
CTTAGGCAAAAGTTGTATAA+GGG + chr8_3:2766188-2766207 Msa1269550:three_prime_UTR 30.0%
!! TTTTTGGAGAAGAGTGAAAG+AGG - chr8_3:2760150-2760169 None:intergenic 35.0%
TTCTCCAAAAACCACACAAA+TGG + chr8_3:2760159-2760178 Msa1269550:five_prime_UTR 35.0%
!!! AGAATTTGCTGTTTTTGAGG+GGG - chr8_3:2760223-2760242 None:intergenic 35.0%
!!! GAGAATTTGCTGTTTTTGAG+GGG - chr8_3:2760224-2760243 None:intergenic 35.0%
!!! GTGAGAATTTGCTGTTTTTG+AGG - chr8_3:2760226-2760245 None:intergenic 35.0%
AATGCCGAATTAGCAGATTA+CGG + chr8_3:2760423-2760442 Msa1269550:five_prime_UTR 35.0%
GAATATCTGATCTGACACTA+TGG - chr8_3:2761032-2761051 None:intergenic 35.0%
TTAAGGCTGCTTGTAAAAAC+AGG + chr8_3:2761089-2761108 Msa1269550:intron 35.0%
TAAGGCTGCTTGTAAAAACA+GGG + chr8_3:2761090-2761109 Msa1269550:intron 35.0%
!! GAAGGCATCAAACAAATGAT+GGG - chr8_3:2761544-2761563 None:intergenic 35.0%
!! AGAAGGCATCAAACAAATGA+TGG - chr8_3:2761545-2761564 None:intergenic 35.0%
AAAGAAGCAAGTCATGTTGA+GGG + chr8_3:2761607-2761626 Msa1269550:CDS 35.0%
AGTTAGCAGTAGTGACAATT+GGG + chr8_3:2761641-2761660 Msa1269550:CDS 35.0%
!!! TTTTCCATTTTTTGAGGCTG+TGG + chr8_3:2761833-2761852 Msa1269550:intron 35.0%
TTCACAATGGTTTCACTTGT+AGG - chr8_3:2761868-2761887 None:intergenic 35.0%
TGAATCACATGTTTACTCAG+TGG + chr8_3:2761884-2761903 Msa1269550:CDS 35.0%
TAATCAAGAGAGGAAGATCA+CGG - chr8_3:2761921-2761940 None:intergenic 35.0%
TCTTCCTCTCTTGATTAATC+AGG + chr8_3:2761924-2761943 Msa1269550:CDS 35.0%
! TTTTGCTTACAAACGAAACC+AGG - chr8_3:2761960-2761979 None:intergenic 35.0%
CTTGAATTTCTTTGGCAAGA+AGG + chr8_3:2762095-2762114 Msa1269550:CDS 35.0%
ATCTTGACGAAGAGAATATG+CGG - chr8_3:2762163-2762182 None:intergenic 35.0%
! AGCTTGTTCAAAAGCAAATC+TGG - chr8_3:2762275-2762294 None:intergenic 35.0%
! TCTAAAGTGGAAACATTTGC+TGG + chr8_3:2762322-2762341 Msa1269550:CDS 35.0%
CACAAAATACTTCATTCCTG+TGG + chr8_3:2762473-2762492 Msa1269550:intron 35.0%
!! AGCTTGCTACTTAAAGTTCA+AGG - chr8_3:2762544-2762563 None:intergenic 35.0%
! CTTGATTTTGCCAGCTATTT+CGG + chr8_3:2762562-2762581 Msa1269550:intron 35.0%
TTTAAAGAGACCGAAATAGC+TGG - chr8_3:2762575-2762594 None:intergenic 35.0%
TTGCAGCTAATGTAGCATTA+AGG + chr8_3:2762722-2762741 Msa1269550:intron 35.0%
TTCTGTAAATAAGAGGAGGT+AGG + chr8_3:2762754-2762773 Msa1269550:intron 35.0%
AAATAAGAGGAGGTAGGATT+AGG + chr8_3:2762760-2762779 Msa1269550:intron 35.0%
TCAAATGAGTCATCTATTGC+GGG - chr8_3:2762933-2762952 None:intergenic 35.0%
! TATGCATTGGTATGCGTAAT+AGG + chr8_3:2763120-2763139 Msa1269550:intron 35.0%
! ATGCATTGGTATGCGTAATA+GGG + chr8_3:2763121-2763140 Msa1269550:intron 35.0%
GTCAACTGTGTCATGTATTA+AGG + chr8_3:2763143-2763162 Msa1269550:intron 35.0%
GGCTTGGATTTATCATAAGT+AGG - chr8_3:2763255-2763274 None:intergenic 35.0%
! GACTATAGCAAACCTTTTAG+TGG + chr8_3:2763353-2763372 Msa1269550:intron 35.0%
GAAGACCCCATAAAAGAAAA+TGG - chr8_3:2763440-2763459 None:intergenic 35.0%
TCACAGATGAAAATGGACAA+AGG + chr8_3:2763544-2763563 Msa1269550:CDS 35.0%
CACAGATGAAAATGGACAAA+GGG + chr8_3:2763545-2763564 Msa1269550:CDS 35.0%
CATGTGCAGATATCTTTGTT+AGG + chr8_3:2763710-2763729 Msa1269550:intron 35.0%
GGTTAAATGTAGCACTTTAG+AGG + chr8_3:2763731-2763750 Msa1269550:intron 35.0%
!!! CGCTTATTTTATGCTCGAAT+TGG - chr8_3:2763841-2763860 None:intergenic 35.0%
ACAACATTAGAGAGAGACTT+GGG + chr8_3:2763923-2763942 Msa1269550:intron 35.0%
AGTAAGGAGAGTAGATAAGA+CGG + chr8_3:2764024-2764043 Msa1269550:intron 35.0%
TCAGTTAGAGTATATTCGGA+TGG + chr8_3:2764518-2764537 Msa1269550:intron 35.0%
CAGCATGAACTTGTCAAAAA+TGG - chr8_3:2764794-2764813 None:intergenic 35.0%
AGGTGGTAATTGTACCAATT+TGG + chr8_3:2764829-2764848 Msa1269550:intron 35.0%
TCATCATCCTTCTTCCAAAT+TGG - chr8_3:2764846-2764865 None:intergenic 35.0%
GAAATTGAATTTCCATCCAG+GGG - chr8_3:2764961-2764980 None:intergenic 35.0%
CAGAAATTGAATTTCCATCC+AGG - chr8_3:2764963-2764982 None:intergenic 35.0%
CTGGATGGAAATTCAATTTC+TGG + chr8_3:2764961-2764980 Msa1269550:CDS 35.0%
! ATTTCTGGGAAATGAAGGTT+CGG + chr8_3:2764976-2764995 Msa1269550:intron 35.0%
TGAAGGTTCGGATTTAAACT+TGG + chr8_3:2764988-2765007 Msa1269550:intron 35.0%
! ATTGATTCTGTTTATGCTGC+TGG + chr8_3:2765043-2765062 Msa1269550:intron 35.0%
GGACCAATTTCAATTCTAAG+AGG - chr8_3:2765133-2765152 None:intergenic 35.0%
TTAGAATTGAAATTGGTCCC+CGG + chr8_3:2765134-2765153 Msa1269550:CDS 35.0%
!! GAAAGTGTTTGGAATCTCTA+TGG + chr8_3:2765213-2765232 Msa1269550:CDS 35.0%
ACATACACCTCCAAAATTGA+AGG - chr8_3:2765241-2765260 None:intergenic 35.0%
GGTGTATGTTAAAGACAAGT+TGG + chr8_3:2765252-2765271 Msa1269550:CDS 35.0%
AGACATTTGGATCTAACTGT+TGG + chr8_3:2765358-2765377 Msa1269550:intron 35.0%
! TGTATTACATAGAGTGGACT+TGG - chr8_3:2765512-2765531 None:intergenic 35.0%
! AAAGCATTAGAGACAGTTCT+CGG - chr8_3:2765545-2765564 None:intergenic 35.0%
AACTGTCTCTAATGCTTTAG+TGG + chr8_3:2765547-2765566 Msa1269550:intron 35.0%
TGCAATATCACAAGGCAAAT+GGG + chr8_3:2765767-2765786 Msa1269550:CDS 35.0%
GTTGTTAATCATGGTCTTTC+TGG - chr8_3:2765884-2765903 None:intergenic 35.0%
CTTGCAGAGTTAGTAAGATT+TGG - chr8_3:2766063-2766082 None:intergenic 35.0%
! GACACCATTTGTGTGGTTTT+TGG - chr8_3:2760166-2760185 None:intergenic 40.0%
!! GATTCTTTGAGTTGTCGACT+CGG - chr8_3:2760335-2760354 None:intergenic 40.0%
GTAATCTGCTAATTCGGCAT+TGG - chr8_3:2760424-2760443 None:intergenic 40.0%
ACAATGGTTATTCGTCCCTA+TGG + chr8_3:2760459-2760478 Msa1269550:exon 40.0%
AATGTCAAGTTCAAGGAGAC+TGG + chr8_3:2760608-2760627 Msa1269550:CDS 40.0%
! CTGCAATTTGTTTGCATAGG+AGG + chr8_3:2760696-2760715 Msa1269550:intron 40.0%
CTGCTTGTAAAAACAGGGTA+AGG + chr8_3:2761095-2761114 Msa1269550:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr8_3:2761121-2761140 Msa1269550:intron 40.0%
ACAGTACAAGATATAGGCAC+AGG - chr8_3:2761436-2761455 None:intergenic 40.0%
TGCAGAACAGATTTGAGAGA+AGG - chr8_3:2761562-2761581 None:intergenic 40.0%
GAAAGAAGCAAGTCATGTTG+AGG + chr8_3:2761606-2761625 Msa1269550:CDS 40.0%
ATTGTCACTACTGCTAACTC+TGG - chr8_3:2761640-2761659 None:intergenic 40.0%
GAGTTAGCAGTAGTGACAAT+TGG + chr8_3:2761640-2761659 Msa1269550:CDS 40.0%
GTTAGCAGTAGTGACAATTG+GGG + chr8_3:2761642-2761661 Msa1269550:CDS 40.0%
TTAGCAGTAGTGACAATTGG+GGG + chr8_3:2761643-2761662 Msa1269550:CDS 40.0%
CAATGGTTTCACTTGTAGGT+CGG - chr8_3:2761864-2761883 None:intergenic 40.0%
TAATCAGGTAAACGATGTCC+TGG + chr8_3:2761939-2761958 Msa1269550:intron 40.0%
AGCTGCCATACCTGTTATTA+CGG + chr8_3:2762291-2762310 Msa1269550:CDS 40.0%
! GATTTTCGACCCGTAATAAC+AGG - chr8_3:2762304-2762323 None:intergenic 40.0%
TACGGGTCGAAAATCTAAAG+TGG + chr8_3:2762309-2762328 Msa1269550:CDS 40.0%
TTGTAAGACCTACACGATTG+AGG + chr8_3:2762348-2762367 Msa1269550:CDS 40.0%
TACACGATTGAGGCAATGAT+GGG + chr8_3:2762358-2762377 Msa1269550:CDS 40.0%
!! AAAAGTTTTGGCCAAGGTTG+TGG - chr8_3:2762414-2762433 None:intergenic 40.0%
AATGCTACATTAGCTGCAAC+CGG - chr8_3:2762721-2762740 None:intergenic 40.0%
CAGCTAATGTAGCATTAAGG+AGG + chr8_3:2762725-2762744 Msa1269550:intron 40.0%
GAAGGATTGTTGTGTAAGTG+TGG - chr8_3:2762821-2762840 None:intergenic 40.0%
! CAAGTGATAGTAGGACTAGT+TGG - chr8_3:2762858-2762877 None:intergenic 40.0%
CTGTGTCATGTATTAAGGGA+CGG + chr8_3:2763148-2763167 Msa1269550:intron 40.0%
ATGGCACAATCAATATGGCT+TGG - chr8_3:2763271-2763290 None:intergenic 40.0%
CACTCATGCTTTCTATAGCT+TGG - chr8_3:2763323-2763342 None:intergenic 40.0%
GTGCAGTTCACAGATGAAAA+TGG + chr8_3:2763537-2763556 Msa1269550:intron 40.0%
!! GTTAGTACTCGTTTTGTTGG+AGG + chr8_3:2763594-2763613 Msa1269550:CDS 40.0%
!!! TTTTGTTGGAGGCATCATCA+TGG + chr8_3:2763605-2763624 Msa1269550:CDS 40.0%
!! CAATCTTTGGAGGAAGCATT+AGG - chr8_3:2763650-2763669 None:intergenic 40.0%
AAGAATATGGGACAGAGTGT+TGG + chr8_3:2763804-2763823 Msa1269550:intron 40.0%
! AGAATATGGGACAGAGTGTT+GGG + chr8_3:2763805-2763824 Msa1269550:intron 40.0%
CGAGCATAAAATAAGCGTAG+AGG + chr8_3:2763844-2763863 Msa1269550:intron 40.0%
AAATAAGCGTAGAGGAGATG+AGG + chr8_3:2763852-2763871 Msa1269550:intron 40.0%
TGTGGTAAGACTAGCAAGAT+AGG + chr8_3:2763890-2763909 Msa1269550:intron 40.0%
GACAACATTAGAGAGAGACT+TGG + chr8_3:2763922-2763941 Msa1269550:intron 40.0%
CAACATTAGAGAGAGACTTG+GGG + chr8_3:2763924-2763943 Msa1269550:intron 40.0%
! TTCACCGTCTTTTCTACAAG+AGG - chr8_3:2763955-2763974 None:intergenic 40.0%
TAGAAAAGACGGTGAAAACC+CGG + chr8_3:2763959-2763978 Msa1269550:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG + chr8_3:2764046-2764065 Msa1269550:intron 40.0%
TTATACCACTAAGTGGTGGT+CGG - chr8_3:2764184-2764203 None:intergenic 40.0%
TGAATTGAGGTGAGTCCTAT+TGG - chr8_3:2764269-2764288 None:intergenic 40.0%
! ACAGTGAAAGCTGTCTCTTT+TGG + chr8_3:2764332-2764351 Msa1269550:intron 40.0%
CACTGGATGTATTCATGCAT+CGG + chr8_3:2764484-2764503 Msa1269550:intron 40.0%
GTTAGAGTATATTCGGATGG+AGG + chr8_3:2764521-2764540 Msa1269550:intron 40.0%
TTGGATGTAGAAGTTTGGAG+TGG - chr8_3:2764713-2764732 None:intergenic 40.0%
GTACAATTACCACCTAAACC+AGG - chr8_3:2764824-2764843 None:intergenic 40.0%
AAAGAAGCTCTTCAAAGCTC+TGG + chr8_3:2764900-2764919 Msa1269550:CDS 40.0%
TAAGAGGAACTCCCTGAAAT+TGG - chr8_3:2765117-2765136 None:intergenic 40.0%
TAGAATTGAAATTGGTCCCC+GGG + chr8_3:2765135-2765154 Msa1269550:CDS 40.0%
ATATCCAGGAGAGATATTCC+TGG + chr8_3:2765181-2765200 Msa1269550:CDS 40.0%
TATCCAGGAGAGATATTCCT+GGG + chr8_3:2765182-2765201 Msa1269550:CDS 40.0%
! CTCTATGGAGCCTTCAATTT+TGG + chr8_3:2765228-2765247 Msa1269550:CDS 40.0%
! TATGGAGCCTTCAATTTTGG+AGG + chr8_3:2765231-2765250 Msa1269550:CDS 40.0%
! CGAGATACAGTCTTCTCTTT+TGG + chr8_3:2765276-2765295 Msa1269550:CDS 40.0%
!! TACAGTCTTCTCTTTTGGAG+AGG + chr8_3:2765281-2765300 Msa1269550:CDS 40.0%
!! ACAGTCTTCTCTTTTGGAGA+GGG + chr8_3:2765282-2765301 Msa1269550:CDS 40.0%
!! TTGGATCTAACTGTTGGTTC+TGG + chr8_3:2765364-2765383 Msa1269550:intron 40.0%
! TACATAGAGTGGACTTGGTT+TGG - chr8_3:2765507-2765526 None:intergenic 40.0%
CAATTGGAATGAGTTCCTTG+TGG + chr8_3:2765607-2765626 Msa1269550:intron 40.0%
TGTCAATTTGCCTGTTTGCT+GGG - chr8_3:2765677-2765696 None:intergenic 40.0%
ATGTCAATTTGCCTGTTTGC+TGG - chr8_3:2765678-2765697 None:intergenic 40.0%
CTGCAATATCACAAGGCAAA+TGG + chr8_3:2765766-2765785 Msa1269550:CDS 40.0%
TTTCCATTTGAACAGCCACA+AGG + chr8_3:2765984-2766003 Msa1269550:CDS 40.0%
TTCCATTTGAACAGCCACAA+GGG + chr8_3:2765985-2766004 Msa1269550:CDS 40.0%
AAAATAGCCACTTCTTCAGC+AGG - chr8_3:2766038-2766057 None:intergenic 40.0%
AGGAAGTAGAGAGTGAGATG+AGG - chr8_3:2760130-2760149 None:intergenic 45.0%
CTTGAGAGACACCATTTGTG+TGG - chr8_3:2760173-2760192 None:intergenic 45.0%
!!! ATTTGCTGTTTTTGAGGGGG+AGG - chr8_3:2760220-2760239 None:intergenic 45.0%
CGGACCGTAATCTGCTAATT+CGG - chr8_3:2760430-2760449 None:intergenic 45.0%
CGAATTAGCAGATTACGGTC+CGG + chr8_3:2760428-2760447 Msa1269550:five_prime_UTR 45.0%
ATAACCATTGTACCGCGAAC+CGG - chr8_3:2760450-2760469 None:intergenic 45.0%
TCCCTATGGTTACGCCATTT+GGG + chr8_3:2760473-2760492 Msa1269550:CDS 45.0%
TCCCAAATGGCGTAACCATA+GGG - chr8_3:2760477-2760496 None:intergenic 45.0%
TTCCCAAATGGCGTAACCAT+AGG - chr8_3:2760478-2760497 None:intergenic 45.0%
AACCTGAATGGCTTCCCAAA+TGG - chr8_3:2760490-2760509 None:intergenic 45.0%
AAGCACTTGCGACACTGTTT+GGG - chr8_3:2760969-2760988 None:intergenic 45.0%
TAAGCACTTGCGACACTGTT+TGG - chr8_3:2760970-2760989 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr8_3:2761117-2761136 Msa1269550:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr8_3:2761120-2761139 Msa1269550:intron 45.0%
!! TGCTTGTACTTGGGTTAGTG+CGG + chr8_3:2761354-2761373 Msa1269550:intron 45.0%
CGTTGAAAAGCTGTGACCTA+AGG + chr8_3:2761797-2761816 Msa1269550:intron 45.0%
! TTGAATGAACGGGCTTCAGT+GGG + chr8_3:2762025-2762044 Msa1269550:intron 45.0%
AGTGGGCAAATGTCACAAGA+TGG + chr8_3:2762042-2762061 Msa1269550:intron 45.0%
GTGGGCAAATGTCACAAGAT+GGG + chr8_3:2762043-2762062 Msa1269550:intron 45.0%
TCCAGAAGAGGCAGAAAATG+AGG + chr8_3:2762136-2762155 Msa1269550:CDS 45.0%
! ACCTCATTTTCTGCCTCTTC+TGG - chr8_3:2762140-2762159 None:intergenic 45.0%
CAAGTATTCTGCTCTGTTGC+AGG + chr8_3:2762225-2762244 Msa1269550:intron 45.0%
GCTGCCATACCTGTTATTAC+GGG + chr8_3:2762292-2762311 Msa1269550:CDS 45.0%
TCGACCCGTAATAACAGGTA+TGG - chr8_3:2762299-2762318 None:intergenic 45.0%
CATCATTGCCTCAATCGTGT+AGG - chr8_3:2762359-2762378 None:intergenic 45.0%
CTACACGATTGAGGCAATGA+TGG + chr8_3:2762357-2762376 Msa1269550:CDS 45.0%
!! GACAAGAAAGCATTGCAAGC+AGG + chr8_3:2762382-2762401 Msa1269550:CDS 45.0%
!! CAAAGGCACGGGAAAAGTTT+TGG - chr8_3:2762426-2762445 None:intergenic 45.0%
AGACCTGTGTTTCAAAGGCA+CGG - chr8_3:2762438-2762457 None:intergenic 45.0%
GCATCAGACCTGTGTTTCAA+AGG - chr8_3:2762443-2762462 None:intergenic 45.0%
ATGAGTCATCTATTGCGGGA+CGG - chr8_3:2762929-2762948 None:intergenic 45.0%
TGTCATGTATTAAGGGACGG+AGG + chr8_3:2763151-2763170 Msa1269550:intron 45.0%
GTCATGTATTAAGGGACGGA+GGG + chr8_3:2763152-2763171 Msa1269550:intron 45.0%
GAAGTGGGGAAAACAGAATC+AGG - chr8_3:2763388-2763407 None:intergenic 45.0%
TATTTGGCAGACATCATGGG+CGG + chr8_3:2763572-2763591 Msa1269550:CDS 45.0%
! GCGGTTAGTACTCGTTTTGT+TGG + chr8_3:2763591-2763610 Msa1269550:CDS 45.0%
ATGGTACATGGAGATGATGC+TGG + chr8_3:2763624-2763643 Msa1269550:CDS 45.0%
! TGTATCGGTGCAATCTTTGG+AGG - chr8_3:2763660-2763679 None:intergenic 45.0%
! TCCAAAGATTGCACCGATAC+AGG + chr8_3:2763659-2763678 Msa1269550:CDS 45.0%
! ACCTGTATCGGTGCAATCTT+TGG - chr8_3:2763663-2763682 None:intergenic 45.0%
! AGATTGCACCGATACAGGTA+TGG + chr8_3:2763664-2763683 Msa1269550:intron 45.0%
GCATCCAACCATACCTGTAT+CGG - chr8_3:2763675-2763694 None:intergenic 45.0%
CAGGTATGGTTGGATGCTAT+TGG + chr8_3:2763678-2763697 Msa1269550:intron 45.0%
AGGATGTTGCGTTGTATGTG+TGG + chr8_3:2763872-2763891 Msa1269550:intron 45.0%
AGCGCCTCTTGTAGAAAAGA+CGG + chr8_3:2763948-2763967 Msa1269550:intron 45.0%
AAGGAGAGTAGATAAGACGG+AGG + chr8_3:2764027-2764046 Msa1269550:intron 45.0%
GACCACCACTTAGTGGTATA+AGG + chr8_3:2764183-2764202 Msa1269550:intron 45.0%
! AGCCTTATACCACTAAGTGG+TGG - chr8_3:2764188-2764207 None:intergenic 45.0%
! CCAAGCCTTATACCACTAAG+TGG - chr8_3:2764191-2764210 None:intergenic 45.0%
CCACTTAGTGGTATAAGGCT+TGG + chr8_3:2764188-2764207 Msa1269550:intron 45.0%
GGAGGAGATTGAGAAGATGA+AGG + chr8_3:2764539-2764558 Msa1269550:intron 45.0%
AGAGATATTCCTGGGAAGCA+AGG + chr8_3:2765190-2765209 Msa1269550:CDS 45.0%
GAGATATTCCTGGGAAGCAA+GGG + chr8_3:2765191-2765210 Msa1269550:CDS 45.0%
GGGCAATTGCATTTCGAGAT+AGG + chr8_3:2765302-2765321 Msa1269550:CDS 45.0%
TGCACAACATGATGACCACA+AGG - chr8_3:2765625-2765644 None:intergenic 45.0%
! GTCAATTTGCCTGTTTGCTG+GGG - chr8_3:2765676-2765695 None:intergenic 45.0%
TATCACAAGGCAAATGGGCA+AGG + chr8_3:2765772-2765791 Msa1269550:CDS 45.0%
ATCACAAGGCAAATGGGCAA+GGG + chr8_3:2765773-2765792 Msa1269550:CDS 45.0%
AACACAACCTAGCAGACCAA+GGG - chr8_3:2765800-2765819 None:intergenic 45.0%
AAACACAACCTAGCAGACCA+AGG - chr8_3:2765801-2765820 None:intergenic 45.0%
AGGAAACTGGAGCAACTATC+AGG + chr8_3:2765958-2765977 Msa1269550:CDS 45.0%
ATCCCTTGTGGCTGTTCAAA+TGG - chr8_3:2765990-2766009 None:intergenic 45.0%
TGCTTGAACCCTTAGAGCAA+AGG + chr8_3:2766333-2766352 Msa1269550:three_prime_UTR 45.0%
GCTTGAACCCTTAGAGCAAA+GGG + chr8_3:2766334-2766353 Msa1269550:three_prime_UTR 45.0%
CTTTCGTCCCTTTGCTCTAA+GGG - chr8_3:2766344-2766363 None:intergenic 45.0%
ACTTTCGTCCCTTTGCTCTA+AGG - chr8_3:2766345-2766364 None:intergenic 45.0%
!! TATATATAATTAATTAAGTT+TGG - chr8_3:2760673-2760692 None:intergenic 5.0%
!! TTTATTGTTATATAAATTTA+AGG + chr8_3:2761072-2761091 Msa1269550:intron 5.0%
!! TTTATATAACAATAAAAAAA+GGG - chr8_3:2761195-2761214 None:intergenic 5.0%
!! ATTTATATAACAATAAAAAA+AGG - chr8_3:2761196-2761215 None:intergenic 5.0%
!! ACATATTTATATAAAAATAA+AGG - chr8_3:2765834-2765853 None:intergenic 5.0%
!!! TTTTATATAAATATGTTATA+CGG + chr8_3:2765838-2765857 Msa1269550:intron 5.0%
!! TTTTTGAGGGGGAGGAGAAG+AGG - chr8_3:2760212-2760231 None:intergenic 50.0%
!! TGAGTTGTCGACTCGGTCTT+TGG - chr8_3:2760328-2760347 None:intergenic 50.0%
!! TAGGAGTGATGACTCGGTCA+GGG - chr8_3:2760362-2760381 None:intergenic 50.0%
GTGACCTAGGAGTGATGACT+CGG - chr8_3:2760368-2760387 None:intergenic 50.0%
AGTCATCACTCCTAGGTCAC+AGG + chr8_3:2760368-2760387 Msa1269550:five_prime_UTR 50.0%
GCATTGAAGTCCTGTGACCT+AGG - chr8_3:2760381-2760400 None:intergenic 50.0%
GTCCCTATGGTTACGCCATT+TGG + chr8_3:2760472-2760491 Msa1269550:CDS 50.0%
!! TCTGACACTATGGGCTGGTT+TGG - chr8_3:2761022-2761041 None:intergenic 50.0%
TCTGATCTGACACTATGGGC+TGG - chr8_3:2761027-2761046 None:intergenic 50.0%
CTAAAGCTCCCTCATACGCA+GGG - chr8_3:2761160-2761179 None:intergenic 50.0%
ACTAAAGCTCCCTCATACGC+AGG - chr8_3:2761161-2761180 None:intergenic 50.0%
! ATGAGGGAGCTTTAGTGCAC+CGG + chr8_3:2761165-2761184 Msa1269550:intron 50.0%
AGTGACAATTGGGGGTGGAA+AGG + chr8_3:2761651-2761670 Msa1269550:CDS 50.0%
GGAACTTGAAGAGAAGCTCG+TGG + chr8_3:2761672-2761691 Msa1269550:CDS 50.0%
CCTGCCACAGCCTCAAAAAA+TGG - chr8_3:2761840-2761859 None:intergenic 50.0%
!!! CCATTTTTTGAGGCTGTGGC+AGG + chr8_3:2761837-2761856 Msa1269550:intron 50.0%
GAGGAAGATCACGGTAGCTA+TGG - chr8_3:2761912-2761931 None:intergenic 50.0%
CTGAAGCCCGTTCATTCAAC+AGG - chr8_3:2762024-2762043 None:intergenic 50.0%
! GTTGAATGAACGGGCTTCAG+TGG + chr8_3:2762024-2762043 Msa1269550:intron 50.0%
TGCTCATGCAACTCCAGAAG+AGG + chr8_3:2762124-2762143 Msa1269550:CDS 50.0%
!! CACGGGAAAAGTTTTGGCCA+AGG - chr8_3:2762420-2762439 None:intergenic 50.0%
!! TTCCCGTGCCTTTGAAACAC+AGG + chr8_3:2762432-2762451 Msa1269550:CDS 50.0%
! GACCTGTGTTTCAAAGGCAC+GGG - chr8_3:2762437-2762456 None:intergenic 50.0%
AGGATGCTGCAGCCACTAAA+AGG - chr8_3:2763368-2763387 None:intergenic 50.0%
!! GGAGGCATCATCATGGTACA+TGG + chr8_3:2763612-2763631 Msa1269550:CDS 50.0%
! TGCACCGATACAGGTATGGT+TGG + chr8_3:2763668-2763687 Msa1269550:intron 50.0%
!! ATATGGGACAGAGTGTTGGG+CGG + chr8_3:2763808-2763827 Msa1269550:intron 50.0%
AAAACCCGGCTTAGGTGGTT+TGG + chr8_3:2763973-2763992 Msa1269550:intron 50.0%
AAACCCGGCTTAGGTGGTTT+GGG + chr8_3:2763974-2763993 Msa1269550:intron 50.0%
AGTTCATGCTGTGCATTGCC+TGG + chr8_3:2764803-2764822 Msa1269550:intron 50.0%
TGCTGTGCATTGCCTGGTTT+AGG + chr8_3:2764809-2764828 Msa1269550:intron 50.0%
TGTGCATTGCCTGGTTTAGG+TGG + chr8_3:2764812-2764831 Msa1269550:intron 50.0%
GACTCAGATCAAAGAACCCC+TGG + chr8_3:2764942-2764961 Msa1269550:CDS 50.0%
CAGATCAAAGAACCCCTGGA+TGG + chr8_3:2764946-2764965 Msa1269550:CDS 50.0%
! GTGGAAGTGTGGTGATATCC+AGG + chr8_3:2765167-2765186 Msa1269550:CDS 50.0%
CTTCCCAGGAATATCTCTCC+TGG - chr8_3:2765188-2765207 None:intergenic 50.0%
AACACTTTCCCTTGCTTCCC+AGG - chr8_3:2765202-2765221 None:intergenic 50.0%
!! GGGAAGCAAGGGAAAGTGTT+TGG + chr8_3:2765202-2765221 Msa1269550:CDS 50.0%
GGCATGAACATGTGTGCGAT+GGG - chr8_3:2765651-2765670 None:intergenic 50.0%
TGGCATGAACATGTGTGCGA+TGG - chr8_3:2765652-2765671 None:intergenic 50.0%
! ATTTGCCTGTTTGCTGGGGA+TGG - chr8_3:2765672-2765691 None:intergenic 50.0%
TCACAAGGCAAATGGGCAAG+GGG + chr8_3:2765774-2765793 Msa1269550:CDS 50.0%
AGGAGATCCTGCTGAAGAAG+TGG + chr8_3:2766028-2766047 Msa1269550:CDS 50.0%
GGCGGAGAATGATTGGGGAA+CGG - chr8_3:2760248-2760267 None:intergenic 55.0%
!! TGGCGGTGAAAGGTTGGTGA+CGG - chr8_3:2760275-2760294 None:intergenic 55.0%
! AGAAGGTGGCGGTGAAAGGT+TGG - chr8_3:2760281-2760300 None:intergenic 55.0%
!!! AGTGGTTTTGGCGGAGAAGG+TGG - chr8_3:2760295-2760314 None:intergenic 55.0%
!!! TGCAGTGGTTTTGGCGGAGA+AGG - chr8_3:2760298-2760317 None:intergenic 55.0%
!!! CTCTGCTGCAGTGGTTTTGG+CGG - chr8_3:2760304-2760323 None:intergenic 55.0%
!! CTAGGAGTGATGACTCGGTC+AGG - chr8_3:2760363-2760382 None:intergenic 55.0%
CTGACCGAGTCATCACTCCT+AGG + chr8_3:2760361-2760380 Msa1269550:five_prime_UTR 55.0%
GGTCACAGGACTTCAATGCG+TGG + chr8_3:2760382-2760401 Msa1269550:five_prime_UTR 55.0%
CGCCATTTGGGAAGCCATTC+AGG + chr8_3:2760485-2760504 Msa1269550:CDS 55.0%
! TGAGGGAGCTTTAGTGCACC+GGG + chr8_3:2761166-2761185 Msa1269550:intron 55.0%
GCAGTAGTGACAATTGGGGG+TGG + chr8_3:2761646-2761665 Msa1269550:CDS 55.0%
!! GTTTTGGCCAAGGTTGTGGC+TGG - chr8_3:2762410-2762429 None:intergenic 55.0%
GTCATCTATTGCGGGACGGA+GGG - chr8_3:2762925-2762944 None:intergenic 55.0%
AGTCATCTATTGCGGGACGG+AGG - chr8_3:2762926-2762945 None:intergenic 55.0%
GCAGCTGCATCCTCGTTGAA+AGG - chr8_3:2763502-2763521 None:intergenic 55.0%
AGACGGTGAAAACCCGGCTT+AGG + chr8_3:2763965-2763984 Msa1269550:intron 55.0%
ATGCCCAAACCACCTAAGCC+GGG - chr8_3:2763980-2763999 None:intergenic 55.0%
CATGCCCAAACCACCTAAGC+CGG - chr8_3:2763981-2764000 None:intergenic 55.0%
! GGTGGTTTGGGCATGTAGAG+AGG + chr8_3:2763986-2764005 Msa1269550:intron 55.0%
CTAAGTGGTGGTCGGCTACA+TGG - chr8_3:2764176-2764195 None:intergenic 55.0%
TGTAGCCGACCACCACTTAG+TGG + chr8_3:2764176-2764195 Msa1269550:intron 55.0%
ACTTCCACTAGACACGTCCC+GGG - chr8_3:2765155-2765174 None:intergenic 55.0%
CACTTCCACTAGACACGTCC+CGG - chr8_3:2765156-2765175 None:intergenic 55.0%
GGACGTGTCTAGTGGAAGTG+TGG + chr8_3:2765156-2765175 Msa1269550:CDS 55.0%
TCATGCCATCCCCAGCAAAC+AGG + chr8_3:2765664-2765683 Msa1269550:intron 55.0%
TTGAGGGGGAGGAGAAGAGG+TGG - chr8_3:2760209-2760228 None:intergenic 60.0%
!! GCGGTGGCGGAGAATGATTG+GGG - chr8_3:2760253-2760272 None:intergenic 60.0%
!! GGCGGTGGCGGAGAATGATT+GGG - chr8_3:2760254-2760273 None:intergenic 60.0%
!! TGAAAGGTTGGTGACGGCGG+TGG - chr8_3:2760269-2760288 None:intergenic 60.0%
!! CGGTGAAAGGTTGGTGACGG+CGG - chr8_3:2760272-2760291 None:intergenic 60.0%
!! GGTTTTGGCGGAGAAGGTGG+CGG - chr8_3:2760292-2760311 None:intergenic 60.0%
CGCCAAAACCACTGCAGCAG+AGG + chr8_3:2760302-2760321 Msa1269550:five_prime_UTR 60.0%
! GGCCTCTGCTGCAGTGGTTT+TGG - chr8_3:2760307-2760326 None:intergenic 60.0%
GTCTTTGGCCTCTGCTGCAG+TGG - chr8_3:2760313-2760332 None:intergenic 60.0%
! GCAGATTACGGTCCGGTTCG+CGG + chr8_3:2760435-2760454 Msa1269550:five_prime_UTR 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr8_3:2761133-2761152 Msa1269550:intron 60.0%
TCATACGCAGGGTCCGGGAA+GGG - chr8_3:2761149-2761168 None:intergenic 60.0%
TTCCCGGACCCTGCGTATGA+GGG + chr8_3:2761149-2761168 Msa1269550:intron 60.0%
GCAGGAACCAGCCACAACCT+TGG + chr8_3:2762400-2762419 Msa1269550:CDS 60.0%
CGGTGAAAACCCGGCTTAGG+TGG + chr8_3:2763968-2763987 Msa1269550:intron 60.0%
CTTCCACTAGACACGTCCCG+GGG - chr8_3:2765154-2765173 None:intergenic 60.0%
!! CGGCGGTGGCGGAGAATGAT+TGG - chr8_3:2760255-2760274 None:intergenic 65.0%
!! AAGGTTGGTGACGGCGGTGG+CGG - chr8_3:2760266-2760285 None:intergenic 65.0%
! GCGGAGAAGGTGGCGGTGAA+AGG - chr8_3:2760285-2760304 None:intergenic 65.0%
! CGGTCCGGTTCGCGGTACAA+TGG + chr8_3:2760443-2760462 Msa1269550:exon 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr8_3:2761135-2761154 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr8_3:2761148-2761167 None:intergenic 65.0%
CTCATACGCAGGGTCCGGGA+AGG - chr8_3:2761150-2761169 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+AGG + chr8_3:2761148-2761167 Msa1269550:intron 65.0%
CTCCCTCATACGCAGGGTCC+GGG - chr8_3:2761154-2761173 None:intergenic 65.0%
GCTCCCTCATACGCAGGGTC+CGG - chr8_3:2761155-2761174 None:intergenic 65.0%
GCAAATGGGCAAGGGGCCCT+TGG + chr8_3:2765781-2765800 Msa1269550:CDS 65.0%
CAAGGGGCCCTTGGTCTGCT+AGG + chr8_3:2765790-2765809 Msa1269550:CDS 65.0%
GGTCCCCGGGACGTGTCTAG+TGG + chr8_3:2765148-2765167 Msa1269550:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 2760109 2766365 2760109 ID=Msa1269550;Name=Msa1269550
chr8_3 mRNA 2760109 2766365 2760109 ID=Msa1269550-mRNA-1;Parent=Msa1269550;Name=Msa1269550-mRNA-1;_AED=0.09;_eAED=0.09;_QI=353|1|1|1|1|1|11|292|448
chr8_3 exon 2760109 2760506 2760109 ID=Msa1269550-mRNA-1:exon:856;Parent=Msa1269550-mRNA-1
chr8_3 exon 2760599 2760655 2760599 ID=Msa1269550-mRNA-1:exon:857;Parent=Msa1269550-mRNA-1
chr8_3 exon 2761583 2761693 2761583 ID=Msa1269550-mRNA-1:exon:858;Parent=Msa1269550-mRNA-1
chr8_3 exon 2761859 2761945 2761859 ID=Msa1269550-mRNA-1:exon:859;Parent=Msa1269550-mRNA-1
chr8_3 exon 2762044 2762157 2762044 ID=Msa1269550-mRNA-1:exon:860;Parent=Msa1269550-mRNA-1
chr8_3 exon 2762247 2762453 2762247 ID=Msa1269550-mRNA-1:exon:861;Parent=Msa1269550-mRNA-1
chr8_3 exon 2763543 2763680 2763543 ID=Msa1269550-mRNA-1:exon:862;Parent=Msa1269550-mRNA-1
chr8_3 exon 2764831 2764992 2764831 ID=Msa1269550-mRNA-1:exon:863;Parent=Msa1269550-mRNA-1
chr8_3 exon 2765124 2765323 2765124 ID=Msa1269550-mRNA-1:exon:864;Parent=Msa1269550-mRNA-1
chr8_3 exon 2765728 2765811 2765728 ID=Msa1269550-mRNA-1:exon:865;Parent=Msa1269550-mRNA-1
chr8_3 exon 2765932 2766365 2765932 ID=Msa1269550-mRNA-1:exon:866;Parent=Msa1269550-mRNA-1
chr8_3 five_prime_UTR 2760109 2760461 2760109 ID=Msa1269550-mRNA-1:five_prime_utr;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2760462 2760506 2760462 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2760599 2760655 2760599 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2761583 2761693 2761583 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2761859 2761945 2761859 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2762044 2762157 2762044 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2762247 2762453 2762247 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2763543 2763680 2763543 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2764831 2764992 2764831 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2765124 2765323 2765124 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2765728 2765811 2765728 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 CDS 2765932 2766073 2765932 ID=Msa1269550-mRNA-1:cds;Parent=Msa1269550-mRNA-1
chr8_3 three_prime_UTR 2766074 2766365 2766074 ID=Msa1269550-mRNA-1:three_prime_utr;Parent=Msa1269550-mRNA-1
Gene Sequence

>Msa1269550

ATGGTTATTCGTCCCTATGGTTACGCCATTTGGGAAGCCATTCAGGATTATTTGAATGTCAAGTTCAAGGAGACTGGACATAGTAACATGTATTTTCCACAGTTTATTCCTTACTCCTTTATAGAGAAAGAAGCAAGTCATGTTGAGGGTTTCAGTCCAGAGTTAGCAGTAGTGACAATTGGGGGTGGAAAGGAACTTGAAGAGAAGCTCGTGGTCCGACCTACAAGTGAAACCATTGTGAATCACATGTTTACTCAGTGGATCCATAGCTACCGTGATCTTCCTCTCTTGATTAATCAGTGGGCAAATGTCACAAGATGGGAGATGCGCACTAAACCATTTGTTAGAACTCTTGAATTTCTTTGGCAAGAAGGTCATACTGCTCATGCAACTCCAGAAGAGGCAGAAAATGAGGCTAAACAAATGATTGACATCTATACCAGATTTGCTTTTGAACAAGCTGCCATACCTGTTATTACGGGTCGAAAATCTAAAGTGGAAACATTTGCTGGTGCTTGTAAGACCTACACGATTGAGGCAATGATGGGTGACAAGAAAGCATTGCAAGCAGGAACCAGCCACAACCTTGGCCAAAACTTTTCCCGTGCCTTTGAAACACAGTTCACAGATGAAAATGGACAAAGGGAATATATTTGGCAGACATCATGGGCGGTTAGTACTCGTTTTGTTGGAGGCATCATCATGGTACATGGAGATGATGCTGGCCTAATGCTTCCTCCAAAGATTGCACCGATACAGGTGGTAATTGTACCAATTTGGAAGAAGGATGATGAAAAAATGGAAGTTCTTAGTGCAGCATTGTCTGTAAAAGAAGCTCTTCAAAGCTCTGGCGTTAAAGTAAAACTTGATGACTCAGATCAAAGAACCCCTGGATGGAAATTCAATTTCTGGGAAATGAAGGGAGTTCCTCTTAGAATTGAAATTGGTCCCCGGGACGTGTCTAGTGGAAGTGTGGTGATATCCAGGAGAGATATTCCTGGGAAGCAAGGGAAAGTGTTTGGAATCTCTATGGAGCCTTCAATTTTGGAGGTGTATGTTAAAGACAAGTTGGACGAGATACAGTCTTCTCTTTTGGAGAGGGCAATTGCATTTCGAGATAGTAATATTGTAGATGTGAGCACATACGAAGATCTTAAATCTGCAATATCACAAGGCAAATGGGCAAGGGGCCCTTGGTCTGCTAGCGATGAAGATGAGTTAAAAGTGAAAGAGGAAACTGGAGCAACTATCAGGTGTTTTCCATTTGAACAGCCACAAGGGATTAAAAGATGTTTGATGACAGGAGATCCTGCTGAAGAAGTGGCTATTTTTGCCAAATCTTACTAA

Protein sequence

>Msa1269550

MVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELAVVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHSYRDLPLLINQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAENEAKQMIDIYTRFAFEQAAIPVITGRKSKVETFAGACKTYTIEAMMGDKKALQAGTSHNLGQNFSRAFETQFTDENGQREYIWQTSWAVSTRFVGGIIMVHGDDAGLMLPPKIAPIQVVIVPIWKKDDEKMEVLSAALSVKEALQSSGVKVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRDIPGKQGKVFGISMEPSILEVYVKDKLDEIQSSLLERAIAFRDSNIVDVSTYEDLKSAISQGKWARGPWSASDEDELKVKEETGATIRCFPFEQPQGIKRCLMTGDPAEEVAIFAKSY*