Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0164830 | KEH17599.1 | 22.872 | 940 | 558 | 39 | 69 | 899 | 1276 | 2157 | 5.26e-20 | 109 |
Msa0164830 | KEH17599.1 | 38.848 | 538 | 289 | 14 | 412 | 935 | 984 | 1495 | 6.88e-80 | 297 |
Msa0164830 | KEH17599.1 | 40.717 | 614 | 277 | 12 | 327 | 935 | 1407 | 1938 | 3.05e-110 | 387 |
Msa0164830 | KEH17599.1 | 76.732 | 967 | 190 | 5 | 4 | 935 | 1495 | 2461 | 0.0 | 1482 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0164830 | A0A072TJ51 | 22.872 | 940 | 558 | 39 | 69 | 899 | 1276 | 2157 | 2.51e-20 | 109 |
Msa0164830 | A0A072TJ51 | 38.848 | 538 | 289 | 14 | 412 | 935 | 984 | 1495 | 3.29e-80 | 297 |
Msa0164830 | A0A072TJ51 | 40.717 | 614 | 277 | 12 | 327 | 935 | 1407 | 1938 | 1.46e-110 | 387 |
Msa0164830 | A0A072TJ51 | 76.732 | 967 | 190 | 5 | 4 | 935 | 1495 | 2461 | 0.0 | 1482 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014120 | Msa0164830 | 0.801641 | 8.182693e-49 | -8.615850e-47 |
Msa0093440 | Msa0164830 | 0.809162 | 2.168900e-50 | -8.615850e-47 |
Msa0113800 | Msa0164830 | 0.835343 | 1.773874e-56 | -8.615850e-47 |
Msa0153890 | Msa0164830 | 0.823730 | 1.183348e-53 | -8.615850e-47 |
Msa0164830 | Msa0225370 | 0.808091 | 3.671274e-50 | -8.615850e-47 |
Msa0164830 | Msa0227800 | 0.804717 | 1.889210e-49 | -8.615850e-47 |
Msa0164830 | Msa0266380 | 0.821967 | 3.046613e-53 | -8.615850e-47 |
Msa0164830 | Msa0304990 | 0.804283 | 2.326981e-49 | -8.615850e-47 |
Msa0164830 | Msa0341860 | 0.804060 | 2.589482e-49 | -8.615850e-47 |
Msa0164830 | Msa0403540 | 0.822900 | 1.849622e-53 | -8.615850e-47 |
Msa0164830 | Msa0467740 | -0.802537 | 5.352273e-49 | -8.615850e-47 |
Msa0164830 | Msa0514130 | -0.802744 | 4.851937e-49 | -8.615850e-47 |
Msa0164830 | Msa0544930 | 0.806575 | 7.697562e-50 | -8.615850e-47 |
Msa0164830 | Msa0641020 | 0.816730 | 4.756750e-52 | -8.615850e-47 |
Msa0164830 | Msa0641030 | 0.803669 | 3.122295e-49 | -8.615850e-47 |
Msa0164830 | Msa0660870 | 0.803336 | 3.660163e-49 | -8.615850e-47 |
Msa0164830 | Msa0679560 | 0.812916 | 3.331451e-51 | -8.615850e-47 |
Msa0164830 | Msa0883410 | 0.800390 | 1.474076e-48 | -8.615850e-47 |
Msa0164830 | Msa0912470 | 0.811872 | 5.634246e-51 | -8.615850e-47 |
Msa0164830 | Msa0984840 | 0.803860 | 2.849690e-49 | -8.615850e-47 |
Msa0164830 | Msa1209560 | 0.817075 | 3.979864e-52 | -8.615850e-47 |
Msa0164830 | Msa1246040 | 0.810148 | 1.331351e-50 | -8.615850e-47 |
Msa0164830 | Msa1298910 | 0.809994 | 1.436709e-50 | -8.615850e-47 |
Msa0164830 | Msa1330530 | 0.817261 | 3.614994e-52 | -8.615850e-47 |
Msa0164830 | Msa1445250 | 0.810832 | 9.474559e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0164830 | MtrunA17_Chr1g0164011 | 76.629 | 967 | 191 | 5 | 4 | 935 | 1529 | 2495 | 0.0 | 1477 |
Msa0164830 | MtrunA17_Chr1g0164011 | 40.554 | 614 | 278 | 12 | 327 | 935 | 1441 | 1972 | 1.58e-112 | 382 |
Msa0164830 | MtrunA17_Chr1g0164011 | 38.848 | 538 | 289 | 14 | 412 | 935 | 1018 | 1529 | 5.58e-84 | 297 |
Msa0164830 | MtrunA17_Chr1g0164011 | 22.872 | 940 | 558 | 39 | 69 | 899 | 1310 | 2191 | 4.89e-24 | 109 |
Msa0164830 | MtrunA17_Chr1g0172231 | 66.953 | 1047 | 228 | 13 | 4 | 935 | 362 | 1405 | 0.0 | 1280 |
Msa0164830 | MtrunA17_Chr1g0172231 | 44.698 | 613 | 331 | 6 | 327 | 935 | 274 | 882 | 1.48e-144 | 465 |
Msa0164830 | MtrunA17_Chr1g0172231 | 38.360 | 378 | 206 | 9 | 569 | 935 | 1 | 362 | 1.42e-56 | 213 |
Msa0164830 | MtrunA17_Chr1g0172231 | 28.444 | 225 | 140 | 7 | 161 | 373 | 1 | 216 | 2.28e-12 | 71.6 |
Msa0164830 | MtrunA17_Chr1g0172231 | 27.115 | 461 | 254 | 22 | 10 | 415 | 975 | 1408 | 1.26e-11 | 68.9 |
Msa0164830 | MtrunA17_Chr6g0474571 | 63.012 | 1049 | 268 | 11 | 4 | 935 | 2048 | 3093 | 0.0 | 1173 |
Msa0164830 | MtrunA17_Chr6g0474571 | 45.611 | 1048 | 447 | 14 | 4 | 935 | 1528 | 2568 | 0.0 | 735 |
Msa0164830 | MtrunA17_Chr6g0474571 | 34.298 | 968 | 590 | 17 | 2 | 935 | 1093 | 2048 | 7.71e-134 | 444 |
Msa0164830 | MtrunA17_Chr6g0474571 | 38.879 | 535 | 294 | 14 | 412 | 935 | 1016 | 1528 | 2.76e-82 | 292 |
Msa0164830 | MtrunA17_Chr6g0474571 | 23.770 | 955 | 537 | 35 | 2 | 901 | 931 | 1749 | 4.21e-35 | 145 |
Msa0164830 | MtrunA17_Chr6g0474571 | 24.125 | 514 | 316 | 17 | 445 | 905 | 744 | 1236 | 5.85e-16 | 83.6 |
Msa0164830 | MtrunA17_Chr8g0359891 | 60.836 | 1029 | 290 | 12 | 4 | 935 | 1924 | 2936 | 0.0 | 1124 |
Msa0164830 | MtrunA17_Chr8g0359891 | 73.273 | 333 | 57 | 1 | 4 | 304 | 1404 | 1736 | 2.79e-143 | 472 |
Msa0164830 | MtrunA17_Chr8g0359891 | 50.454 | 551 | 253 | 12 | 4 | 544 | 563 | 1103 | 1.70e-133 | 443 |
Msa0164830 | MtrunA17_Chr8g0359891 | 44.698 | 613 | 331 | 6 | 327 | 935 | 1316 | 1924 | 2.50e-133 | 443 |
Msa0164830 | MtrunA17_Chr8g0359891 | 36.141 | 653 | 329 | 12 | 327 | 905 | 475 | 1113 | 2.97e-99 | 343 |
Msa0164830 | MtrunA17_Chr8g0359891 | 33.559 | 888 | 493 | 34 | 95 | 935 | 567 | 1404 | 1.48e-89 | 314 |
Msa0164830 | MtrunA17_Chr8g0359891 | 38.318 | 535 | 292 | 14 | 412 | 935 | 56 | 563 | 1.53e-83 | 296 |
Msa0164830 | MtrunA17_Chr8g0359891 | 25.536 | 932 | 559 | 31 | 2 | 871 | 54 | 912 | 3.19e-41 | 165 |
Msa0164830 | MtrunA17_Chr8g0359891 | 33.784 | 148 | 88 | 5 | 275 | 415 | 2795 | 2939 | 2.08e-11 | 68.6 |
Msa0164830 | MtrunA17_Chr1g0163761 | 60.722 | 970 | 322 | 13 | 8 | 935 | 1621 | 2573 | 0.0 | 1072 |
Msa0164830 | MtrunA17_Chr1g0163761 | 49.271 | 686 | 255 | 17 | 3 | 627 | 1529 | 2182 | 1.25e-154 | 505 |
Msa0164830 | MtrunA17_Chr1g0163761 | 44.046 | 613 | 335 | 6 | 327 | 935 | 1442 | 2050 | 8.30e-135 | 447 |
Msa0164830 | MtrunA17_Chr1g0163761 | 37.687 | 536 | 298 | 13 | 412 | 935 | 1019 | 1530 | 2.10e-80 | 286 |
Msa0164830 | MtrunA17_Chr1g0163761 | 37.343 | 399 | 237 | 4 | 4 | 392 | 2050 | 2445 | 4.95e-65 | 239 |
Msa0164830 | MtrunA17_Chr1g0163761 | 33.333 | 294 | 184 | 6 | 4 | 294 | 1019 | 1303 | 7.10e-33 | 138 |
Msa0164830 | MtrunA17_Chr1g0163761 | 24.758 | 929 | 503 | 36 | 31 | 901 | 961 | 1751 | 2.00e-31 | 133 |
Msa0164830 | MtrunA17_Chr1g0163761 | 25.277 | 451 | 273 | 17 | 505 | 905 | 803 | 1239 | 2.60e-14 | 78.2 |
Msa0164830 | MtrunA17_Chr1g0163891 | 61.117 | 967 | 325 | 12 | 8 | 935 | 2152 | 3106 | 0.0 | 1068 |
Msa0164830 | MtrunA17_Chr1g0163891 | 41.404 | 826 | 418 | 13 | 120 | 935 | 1814 | 2583 | 1.42e-168 | 546 |
Msa0164830 | MtrunA17_Chr1g0163891 | 49.419 | 688 | 251 | 16 | 4 | 627 | 2061 | 2715 | 5.91e-157 | 512 |
Msa0164830 | MtrunA17_Chr1g0163891 | 70.904 | 354 | 71 | 1 | 4 | 325 | 1541 | 1894 | 8.73e-147 | 482 |
Msa0164830 | MtrunA17_Chr1g0163891 | 44.535 | 613 | 332 | 6 | 327 | 935 | 1453 | 2061 | 6.14e-141 | 465 |
Msa0164830 | MtrunA17_Chr1g0163891 | 37.477 | 539 | 295 | 15 | 412 | 935 | 1030 | 1541 | 3.94e-80 | 285 |
Msa0164830 | MtrunA17_Chr1g0163891 | 37.500 | 400 | 235 | 5 | 4 | 392 | 2583 | 2978 | 2.71e-64 | 237 |
Msa0164830 | MtrunA17_Chr2g0323691 | 60.329 | 973 | 320 | 14 | 8 | 935 | 2139 | 3090 | 0.0 | 1047 |
Msa0164830 | MtrunA17_Chr2g0323691 | 37.574 | 1014 | 478 | 23 | 10 | 935 | 1621 | 2567 | 1.62e-163 | 531 |
Msa0164830 | MtrunA17_Chr2g0323691 | 49.183 | 673 | 273 | 14 | 4 | 627 | 1528 | 2180 | 5.41e-154 | 503 |
Msa0164830 | MtrunA17_Chr2g0323691 | 49.474 | 665 | 236 | 15 | 4 | 605 | 2048 | 2675 | 1.54e-153 | 502 |
Msa0164830 | MtrunA17_Chr2g0323691 | 35.618 | 963 | 567 | 17 | 10 | 935 | 1102 | 2048 | 1.58e-142 | 470 |
Msa0164830 | MtrunA17_Chr2g0323691 | 36.142 | 534 | 303 | 14 | 415 | 935 | 1020 | 1528 | 1.08e-75 | 272 |
Msa0164830 | MtrunA17_Chr2g0323691 | 38.847 | 399 | 231 | 4 | 4 | 392 | 2567 | 2962 | 1.97e-66 | 244 |
Msa0164830 | MtrunA17_Chr2g0323691 | 24.187 | 922 | 517 | 37 | 31 | 901 | 959 | 1749 | 2.38e-29 | 127 |
Msa0164830 | MtrunA17_Chr1g0172051 | 59.049 | 967 | 339 | 15 | 10 | 935 | 2135 | 3085 | 0.0 | 1013 |
Msa0164830 | MtrunA17_Chr1g0172051 | 48.127 | 694 | 249 | 20 | 4 | 627 | 2044 | 2696 | 2.71e-148 | 487 |
Msa0164830 | MtrunA17_Chr1g0172051 | 35.324 | 971 | 561 | 23 | 8 | 935 | 1618 | 2564 | 5.76e-138 | 456 |
Msa0164830 | MtrunA17_Chr1g0172051 | 42.973 | 619 | 330 | 9 | 327 | 935 | 1439 | 2044 | 1.57e-137 | 455 |
Msa0164830 | MtrunA17_Chr1g0172051 | 73.196 | 291 | 78 | 0 | 4 | 294 | 1527 | 1817 | 5.73e-127 | 424 |
Msa0164830 | MtrunA17_Chr1g0172051 | 37.088 | 577 | 311 | 16 | 373 | 935 | 989 | 1527 | 5.32e-81 | 288 |
Msa0164830 | MtrunA17_Chr1g0172051 | 33.814 | 485 | 280 | 7 | 4 | 453 | 2564 | 3042 | 5.81e-70 | 254 |
Msa0164830 | MtrunA17_Chr1g0172051 | 30.952 | 378 | 240 | 9 | 4 | 373 | 1017 | 1381 | 9.60e-32 | 134 |
Msa0164830 | MtrunA17_Chr1g0172051 | 22.670 | 869 | 526 | 32 | 108 | 901 | 951 | 1748 | 3.06e-19 | 94.4 |
Msa0164830 | MtrunA17_Chr1g0170881 | 80.229 | 612 | 118 | 1 | 327 | 935 | 1438 | 2049 | 0.0 | 976 |
Msa0164830 | MtrunA17_Chr1g0170881 | 39.033 | 538 | 288 | 14 | 412 | 935 | 1015 | 1526 | 5.54e-84 | 297 |
Msa0164830 | MtrunA17_Chr1g0170881 | 38.095 | 399 | 234 | 4 | 4 | 392 | 1526 | 1921 | 4.60e-61 | 227 |
Msa0164830 | MtrunA17_Chr1g0170881 | 23.291 | 936 | 504 | 33 | 31 | 899 | 957 | 1745 | 2.08e-28 | 124 |
Msa0164830 | MtrunA17_Chr1g0170881 | 23.556 | 450 | 245 | 13 | 524 | 905 | 817 | 1235 | 1.22e-13 | 75.9 |
Msa0164830 | MtrunA17_Chr1g0163931 | 75.204 | 613 | 144 | 4 | 327 | 935 | 1439 | 2047 | 0.0 | 926 |
Msa0164830 | MtrunA17_Chr1g0163931 | 37.546 | 538 | 296 | 14 | 412 | 935 | 1016 | 1527 | 6.84e-79 | 281 |
Msa0164830 | MtrunA17_Chr1g0163931 | 40.314 | 382 | 210 | 7 | 3 | 373 | 1526 | 1900 | 3.32e-68 | 249 |
Msa0164830 | MtrunA17_Chr1g0163931 | 24.168 | 931 | 501 | 33 | 31 | 899 | 958 | 1745 | 3.57e-35 | 145 |
Msa0164830 | MtrunA17_Chr1g0163931 | 23.897 | 544 | 319 | 19 | 412 | 905 | 738 | 1236 | 4.20e-15 | 80.5 |
Msa0164830 | MtrunA17_Chr1g0167981 | 52.103 | 975 | 393 | 17 | 8 | 935 | 2142 | 3089 | 0.0 | 880 |
Msa0164830 | MtrunA17_Chr1g0167981 | 44.287 | 1059 | 451 | 18 | 4 | 935 | 1526 | 2572 | 0.0 | 728 |
Msa0164830 | MtrunA17_Chr1g0167981 | 35.963 | 976 | 557 | 20 | 8 | 935 | 1096 | 2051 | 2.22e-146 | 481 |
Msa0164830 | MtrunA17_Chr1g0167981 | 34.198 | 617 | 375 | 14 | 330 | 935 | 930 | 1526 | 3.51e-81 | 288 |
Msa0164830 | MtrunA17_Chr1g0167981 | 32.438 | 484 | 284 | 10 | 4 | 453 | 2572 | 3046 | 4.08e-56 | 212 |
Msa0164830 | MtrunA17_Chr1g0167981 | 27.153 | 685 | 399 | 25 | 4 | 627 | 1013 | 1658 | 1.78e-33 | 140 |
Msa0164830 | MtrunA17_Chr1g0167981 | 24.404 | 545 | 254 | 21 | 436 | 905 | 772 | 1233 | 9.09e-15 | 79.7 |
Msa0164830 | MtrunA17_Chr1g0163801 | 79.241 | 448 | 65 | 1 | 466 | 913 | 1 | 420 | 0.0 | 711 |
Msa0164830 | MtrunA17_Chr1g0163801 | 28.966 | 435 | 234 | 12 | 58 | 453 | 1 | 399 | 9.98e-38 | 147 |
Msa0164830 | MtrunA17_Chr1g0163801 | 24.923 | 325 | 206 | 9 | 333 | 631 | 94 | 406 | 3.43e-13 | 72.8 |
Msa0164830 | MtrunA17_Chr1g0164121 | 73.941 | 307 | 80 | 0 | 629 | 935 | 1 | 307 | 3.52e-157 | 464 |
Msa0164830 | MtrunA17_Chr1g0164121 | 39.560 | 91 | 50 | 2 | 323 | 412 | 221 | 307 | 2.98e-11 | 65.9 |
Msa0164830 | MtrunA17_Chr1g0174511 | 82.192 | 292 | 51 | 1 | 3 | 294 | 1524 | 1814 | 6.35e-148 | 481 |
Msa0164830 | MtrunA17_Chr1g0174511 | 46.237 | 372 | 187 | 4 | 327 | 689 | 1437 | 1804 | 2.13e-90 | 316 |
Msa0164830 | MtrunA17_Chr1g0174511 | 38.404 | 539 | 290 | 16 | 412 | 935 | 1014 | 1525 | 2.72e-79 | 283 |
Msa0164830 | MtrunA17_Chr1g0174511 | 35.254 | 295 | 177 | 7 | 4 | 294 | 1014 | 1298 | 1.83e-34 | 143 |
Msa0164830 | MtrunA17_Chr1g0174511 | 23.953 | 860 | 498 | 31 | 124 | 901 | 961 | 1746 | 1.85e-26 | 117 |
Msa0164830 | MtrunA17_Chr1g0174511 | 23.493 | 481 | 299 | 16 | 472 | 900 | 766 | 1229 | 2.55e-14 | 77.8 |
Msa0164830 | MtrunA17_Chr1g0172081 | 80.400 | 250 | 49 | 0 | 3 | 252 | 2 | 251 | 6.23e-133 | 399 |
Msa0164830 | MtrunA17_Chr1g0172081 | 46.988 | 249 | 131 | 1 | 413 | 661 | 4 | 251 | 3.64e-71 | 236 |
Msa0164830 | MtrunA17_Chr1g0163791 | 78.648 | 281 | 47 | 3 | 3 | 270 | 1524 | 1804 | 2.00e-127 | 423 |
Msa0164830 | MtrunA17_Chr1g0163791 | 48.348 | 333 | 168 | 2 | 327 | 656 | 1437 | 1768 | 4.37e-87 | 306 |
Msa0164830 | MtrunA17_Chr1g0163791 | 36.803 | 538 | 298 | 16 | 413 | 935 | 1015 | 1525 | 9.66e-76 | 272 |
Msa0164830 | MtrunA17_Chr1g0163791 | 33.446 | 296 | 181 | 7 | 4 | 294 | 1014 | 1298 | 1.94e-34 | 143 |
Msa0164830 | MtrunA17_Chr1g0163791 | 23.113 | 861 | 504 | 28 | 124 | 901 | 961 | 1746 | 3.88e-23 | 106 |
Msa0164830 | MtrunA17_Chr1g0167331 | 60.734 | 354 | 98 | 5 | 25 | 337 | 2 | 355 | 1.23e-123 | 379 |
Msa0164830 | MtrunA17_Chr1g0167331 | 36.253 | 411 | 190 | 7 | 432 | 842 | 1 | 339 | 7.40e-63 | 216 |
Msa0164830 | MtrunA17_Chr8g0359871 | 82.174 | 230 | 39 | 1 | 62 | 289 | 1 | 230 | 2.11e-121 | 368 |
Msa0164830 | MtrunA17_Chr8g0359871 | 39.381 | 226 | 134 | 2 | 471 | 694 | 2 | 226 | 1.59e-45 | 163 |
Msa0164830 | MtrunA17_Chr1g0163691 | 82.723 | 191 | 33 | 0 | 575 | 765 | 1 | 191 | 3.72e-108 | 332 |
Msa0164830 | MtrunA17_Chr1g0171091 | 58.900 | 309 | 124 | 2 | 629 | 935 | 1 | 308 | 2.15e-105 | 330 |
Msa0164830 | MtrunA17_Chr1g0163681 | 89.349 | 169 | 18 | 0 | 389 | 557 | 3 | 171 | 2.38e-105 | 324 |
Msa0164830 | MtrunA17_Chr1g0163681 | 55.862 | 145 | 64 | 0 | 4 | 148 | 26 | 170 | 3.35e-47 | 166 |
Msa0164830 | MtrunA17_Chr1g0174521 | 91.176 | 170 | 15 | 0 | 322 | 491 | 74 | 243 | 9.14e-104 | 322 |
Msa0164830 | MtrunA17_Chr1g0174521 | 48.780 | 164 | 82 | 2 | 772 | 935 | 3 | 164 | 1.63e-35 | 135 |
Msa0164830 | MtrunA17_Chr1g0174521 | 65.823 | 79 | 27 | 0 | 4 | 82 | 164 | 242 | 4.92e-27 | 110 |
Msa0164830 | MtrunA17_Chr2g0313591 | 33.676 | 680 | 376 | 12 | 315 | 935 | 874 | 1537 | 3.59e-94 | 326 |
Msa0164830 | MtrunA17_Chr2g0313591 | 30.801 | 487 | 291 | 11 | 4 | 456 | 1022 | 1496 | 3.17e-48 | 187 |
Msa0164830 | MtrunA17_Chr2g0313591 | 24.654 | 434 | 285 | 13 | 10 | 412 | 1115 | 1537 | 1.38e-15 | 82.0 |
Msa0164830 | MtrunA17_Chr2g0313591 | 24.109 | 477 | 270 | 16 | 28 | 480 | 769 | 1177 | 2.64e-13 | 74.7 |
Msa0164830 | MtrunA17_Chr2g0314141 | 78.756 | 193 | 40 | 1 | 41 | 233 | 1 | 192 | 1.34e-93 | 293 |
Msa0164830 | MtrunA17_Chr2g0314141 | 46.154 | 182 | 97 | 1 | 449 | 630 | 1 | 181 | 6.46e-48 | 169 |
Msa0164830 | MtrunA17_Chr2g0313421 | 32.462 | 650 | 387 | 10 | 325 | 935 | 10 | 646 | 5.24e-92 | 305 |
Msa0164830 | MtrunA17_Chr2g0313421 | 30.972 | 494 | 261 | 15 | 14 | 456 | 142 | 606 | 1.96e-47 | 180 |
Msa0164830 | MtrunA17_Chr2g0313421 | 25.117 | 426 | 284 | 14 | 10 | 408 | 225 | 642 | 1.35e-12 | 71.6 |
Msa0164830 | MtrunA17_Chr8g0348201 | 28.797 | 948 | 574 | 29 | 34 | 932 | 326 | 1221 | 2.98e-90 | 315 |
Msa0164830 | MtrunA17_Chr8g0348201 | 32.037 | 540 | 320 | 15 | 411 | 935 | 208 | 715 | 5.93e-59 | 220 |
Msa0164830 | MtrunA17_Chr8g0348201 | 28.239 | 687 | 412 | 25 | 6 | 630 | 802 | 1469 | 9.48e-43 | 169 |
Msa0164830 | MtrunA17_Chr8g0348201 | 26.460 | 291 | 195 | 8 | 7 | 296 | 213 | 485 | 9.25e-26 | 115 |
Msa0164830 | MtrunA17_Chr8g0348201 | 24.561 | 456 | 269 | 14 | 526 | 933 | 1078 | 1506 | 4.16e-24 | 109 |
Msa0164830 | MtrunA17_Chr8g0348201 | 24.566 | 692 | 417 | 22 | 20 | 627 | 695 | 1365 | 8.37e-24 | 108 |
Msa0164830 | MtrunA17_Chr2g0313541 | 37.786 | 524 | 309 | 7 | 411 | 930 | 1029 | 1539 | 4.13e-90 | 314 |
Msa0164830 | MtrunA17_Chr2g0313541 | 30.273 | 512 | 299 | 13 | 4 | 474 | 1030 | 1524 | 2.00e-48 | 187 |
Msa0164830 | MtrunA17_Chr1g0172161 | 36.915 | 577 | 313 | 16 | 373 | 935 | 28 | 567 | 1.30e-89 | 296 |
Msa0164830 | MtrunA17_Chr1g0172161 | 32.667 | 300 | 178 | 9 | 4 | 294 | 56 | 340 | 8.70e-34 | 137 |
Msa0164830 | MtrunA17_Chr1g0172161 | 38.194 | 144 | 82 | 3 | 275 | 413 | 427 | 568 | 1.04e-14 | 78.2 |
Msa0164830 | MtrunA17_Chr2g0314301 | 37.406 | 532 | 319 | 8 | 407 | 935 | 1026 | 1546 | 8.87e-89 | 310 |
Msa0164830 | MtrunA17_Chr2g0314301 | 29.880 | 502 | 276 | 13 | 4 | 456 | 1032 | 1506 | 1.24e-43 | 172 |
Msa0164830 | MtrunA17_Chr2g0314301 | 25.503 | 447 | 255 | 16 | 10 | 407 | 1125 | 1542 | 2.03e-13 | 75.1 |
Msa0164830 | MtrunA17_Chr2g0313331 | 36.106 | 529 | 325 | 7 | 409 | 935 | 711 | 1228 | 2.00e-88 | 307 |
Msa0164830 | MtrunA17_Chr2g0313331 | 29.303 | 488 | 293 | 12 | 3 | 453 | 713 | 1185 | 2.17e-45 | 177 |
Msa0164830 | MtrunA17_Chr2g0313331 | 22.628 | 548 | 348 | 17 | 369 | 898 | 443 | 932 | 1.10e-13 | 75.9 |
Msa0164830 | MtrunA17_Chr2g0313311 | 32.615 | 650 | 386 | 9 | 325 | 935 | 880 | 1516 | 6.15e-88 | 308 |
Msa0164830 | MtrunA17_Chr2g0313311 | 30.488 | 492 | 266 | 13 | 14 | 456 | 1012 | 1476 | 8.97e-46 | 179 |
Msa0164830 | MtrunA17_Chr2g0313311 | 23.305 | 708 | 416 | 26 | 13 | 631 | 811 | 1480 | 3.52e-14 | 77.4 |
Msa0164830 | MtrunA17_Chr2g0313311 | 25.587 | 426 | 282 | 14 | 10 | 408 | 1095 | 1512 | 4.12e-13 | 73.9 |
Msa0164830 | MtrunA17_Chr8g0348251 | 34.921 | 630 | 358 | 19 | 322 | 930 | 171 | 769 | 2.46e-87 | 296 |
Msa0164830 | MtrunA17_Chr8g0348251 | 37.647 | 255 | 139 | 8 | 695 | 935 | 19 | 267 | 2.53e-27 | 119 |
Msa0164830 | MtrunA17_Chr8g0348251 | 33.641 | 217 | 137 | 5 | 4 | 216 | 267 | 480 | 5.51e-22 | 102 |
Msa0164830 | MtrunA17_Chr2g0313481 | 37.262 | 526 | 312 | 7 | 411 | 931 | 1036 | 1548 | 6.04e-87 | 305 |
Msa0164830 | MtrunA17_Chr2g0313481 | 29.400 | 517 | 302 | 14 | 4 | 476 | 1037 | 1534 | 1.33e-42 | 169 |
Msa0164830 | MtrunA17_Chr2g0313481 | 26.682 | 431 | 272 | 17 | 10 | 408 | 1130 | 1548 | 1.76e-16 | 85.1 |
Msa0164830 | MtrunA17_Chr2g0313351 | 35.453 | 519 | 324 | 5 | 418 | 935 | 1031 | 1539 | 5.88e-83 | 293 |
Msa0164830 | MtrunA17_Chr2g0313351 | 30.769 | 494 | 262 | 15 | 14 | 456 | 1035 | 1499 | 4.97e-44 | 174 |
Msa0164830 | MtrunA17_Chr2g0313351 | 22.996 | 761 | 416 | 29 | 6 | 631 | 778 | 1503 | 9.95e-14 | 75.9 |
Msa0164830 | MtrunA17_Chr2g0313351 | 25.467 | 428 | 280 | 16 | 10 | 408 | 1118 | 1535 | 9.23e-12 | 69.7 |
Msa0164830 | MtrunA17_Chr1g0163991 | 38.318 | 535 | 292 | 14 | 412 | 935 | 760 | 1267 | 1.33e-82 | 291 |
Msa0164830 | MtrunA17_Chr1g0163991 | 36.735 | 539 | 299 | 15 | 412 | 935 | 56 | 567 | 1.55e-79 | 282 |
Msa0164830 | MtrunA17_Chr1g0163991 | 32.378 | 698 | 375 | 19 | 4 | 635 | 567 | 1233 | 1.25e-70 | 255 |
Msa0164830 | MtrunA17_Chr1g0163991 | 43.425 | 327 | 157 | 5 | 327 | 629 | 479 | 801 | 1.14e-65 | 241 |
Msa0164830 | MtrunA17_Chr1g0172141 | 36.568 | 577 | 318 | 16 | 373 | 935 | 988 | 1530 | 1.07e-80 | 287 |
Msa0164830 | MtrunA17_Chr1g0172141 | 50.000 | 90 | 42 | 1 | 327 | 413 | 1442 | 1531 | 1.30e-15 | 82.0 |
Msa0164830 | MtrunA17_Chr2g0313491 | 30.603 | 647 | 383 | 11 | 327 | 935 | 886 | 1504 | 4.31e-68 | 248 |
Msa0164830 | MtrunA17_Chr2g0313491 | 29.978 | 457 | 263 | 12 | 34 | 456 | 1028 | 1461 | 2.91e-39 | 158 |
Msa0164830 | MtrunA17_Chr2g0313491 | 22.914 | 707 | 419 | 19 | 6 | 631 | 804 | 1465 | 2.93e-20 | 97.4 |
Msa0164830 | MtrunA17_Chr1g0170961 | 74.436 | 133 | 34 | 0 | 120 | 252 | 1 | 133 | 1.26e-57 | 194 |
Msa0164830 | MtrunA17_Chr1g0170961 | 36.296 | 135 | 85 | 1 | 528 | 662 | 1 | 134 | 1.31e-21 | 92.4 |
Msa0164830 | MtrunA17_Chr1g0172101 | 38.177 | 351 | 192 | 8 | 594 | 935 | 1 | 335 | 1.29e-56 | 199 |
Msa0164830 | MtrunA17_Chr1g0172101 | 48.352 | 91 | 44 | 1 | 327 | 414 | 247 | 337 | 4.58e-14 | 75.1 |
Msa0164830 | MtrunA17_Chr1g0172101 | 30.723 | 166 | 106 | 4 | 190 | 351 | 5 | 165 | 6.54e-12 | 68.2 |
Msa0164830 | MtrunA17_Chr1g0174531 | 82.653 | 98 | 14 | 1 | 593 | 690 | 1 | 95 | 3.54e-49 | 169 |
Msa0164830 | MtrunA17_Chr2g0313461 | 31.622 | 370 | 196 | 7 | 315 | 630 | 873 | 1239 | 2.56e-43 | 171 |
Msa0164830 | MtrunA17_Chr2g0313461 | 37.946 | 224 | 133 | 3 | 4 | 224 | 1021 | 1241 | 2.90e-35 | 145 |
Msa0164830 | MtrunA17_Chr4g0011631 | 33.014 | 418 | 237 | 11 | 523 | 933 | 2 | 383 | 3.62e-41 | 156 |
Msa0164830 | MtrunA17_Chr4g0011631 | 28.808 | 302 | 161 | 9 | 115 | 374 | 2 | 291 | 4.82e-18 | 87.8 |
Msa0164830 | MtrunA17_Chr1g0164101 | 39.837 | 246 | 125 | 8 | 429 | 666 | 4 | 234 | 1.56e-40 | 149 |
Msa0164830 | MtrunA17_Chr1g0164101 | 34.553 | 246 | 145 | 7 | 21 | 261 | 4 | 238 | 6.46e-30 | 119 |
Msa0164830 | MtrunA17_Chr4g0011661 | 31.148 | 427 | 236 | 10 | 523 | 935 | 2 | 384 | 5.38e-39 | 152 |
Msa0164830 | MtrunA17_Chr4g0011661 | 30.769 | 182 | 113 | 3 | 115 | 294 | 2 | 172 | 8.37e-18 | 87.8 |
Msa0164830 | MtrunA17_Chr1g0172071 | 36.296 | 270 | 153 | 7 | 673 | 935 | 4 | 261 | 3.50e-38 | 144 |
Msa0164830 | MtrunA17_Chr1g0172071 | 45.918 | 98 | 50 | 1 | 327 | 421 | 173 | 270 | 1.14e-16 | 81.3 |
Msa0164830 | MtrunA17_Chr2g0313471 | 36.187 | 257 | 159 | 4 | 680 | 935 | 4 | 256 | 3.67e-37 | 140 |
Msa0164830 | MtrunA17_Chr2g0313471 | 36.691 | 139 | 81 | 4 | 275 | 407 | 115 | 252 | 5.75e-16 | 79.0 |
Msa0164830 | MtrunA17_Chr1g0171081 | 66.316 | 95 | 32 | 0 | 838 | 932 | 1 | 95 | 2.66e-35 | 129 |
Msa0164830 | MtrunA17_Chr1g0171081 | 37.363 | 91 | 56 | 1 | 324 | 413 | 9 | 99 | 7.35e-11 | 60.1 |
Msa0164830 | MtrunA17_Chr3g0081941 | 37.156 | 218 | 131 | 3 | 415 | 631 | 1022 | 1234 | 8.15e-34 | 140 |
Msa0164830 | MtrunA17_Chr3g0081941 | 34.081 | 223 | 141 | 3 | 7 | 228 | 1022 | 1239 | 2.01e-29 | 126 |
Msa0164830 | MtrunA17_Chr3g0081941 | 27.457 | 346 | 212 | 12 | 97 | 409 | 930 | 1269 | 4.14e-20 | 96.7 |
Msa0164830 | MtrunA17_Chr3g0081941 | 22.998 | 587 | 331 | 21 | 412 | 932 | 738 | 1269 | 5.25e-19 | 93.2 |
Msa0164830 | MtrunA17_Chr7g0255111 | 24.158 | 683 | 421 | 16 | 307 | 930 | 1314 | 1958 | 2.90e-30 | 129 |
Msa0164830 | MtrunA17_Chr7g0255111 | 23.529 | 680 | 379 | 23 | 322 | 902 | 1025 | 1662 | 1.74e-20 | 98.2 |
Msa0164830 | MtrunA17_Chr7g0255111 | 37.908 | 153 | 90 | 3 | 52 | 199 | 1462 | 1614 | 5.90e-16 | 83.2 |
Msa0164830 | MtrunA17_Chr7g0255111 | 30.000 | 130 | 89 | 1 | 798 | 927 | 1286 | 1413 | 7.86e-14 | 76.3 |
Msa0164830 | MtrunA17_Chr1g0164111 | 65.060 | 83 | 26 | 1 | 373 | 452 | 1 | 83 | 4.99e-28 | 108 |
Msa0164830 | MtrunA17_Chr5g0414911 | 24.776 | 670 | 402 | 19 | 328 | 930 | 1236 | 1870 | 1.40e-27 | 121 |
Msa0164830 | MtrunA17_Chr5g0414911 | 22.588 | 456 | 288 | 12 | 50 | 486 | 1359 | 1768 | 3.48e-16 | 84.0 |
Msa0164830 | MtrunA17_Chr5g0414911 | 29.609 | 179 | 117 | 2 | 460 | 629 | 868 | 1046 | 4.12e-11 | 67.4 |
Msa0164830 | MtrunA17_Chr1g0163651 | 36.683 | 199 | 105 | 6 | 569 | 758 | 1 | 187 | 1.30e-24 | 102 |
Msa0164830 | MtrunA17_Chr1g0163651 | 32.353 | 136 | 89 | 2 | 161 | 294 | 1 | 135 | 2.50e-12 | 67.0 |
Msa0164830 | MtrunA17_Chr2g0314151 | 43.537 | 147 | 75 | 4 | 792 | 935 | 1 | 142 | 8.24e-24 | 99.0 |
Msa0164830 | MtrunA17_Chr2g0314151 | 44.444 | 90 | 47 | 1 | 327 | 413 | 54 | 143 | 1.04e-12 | 67.0 |
Msa0164830 | MtrunA17_Chr2g0314131 | 43.571 | 140 | 77 | 2 | 743 | 882 | 17 | 154 | 3.38e-23 | 97.1 |
Msa0164830 | MtrunA17_Chr1g0146241 | 28.571 | 294 | 192 | 7 | 330 | 614 | 1235 | 1519 | 1.15e-22 | 105 |
Msa0164830 | MtrunA17_Chr1g0146241 | 34.416 | 154 | 99 | 2 | 6 | 159 | 1317 | 1468 | 3.57e-14 | 77.4 |
Msa0164830 | MtrunA17_Chr1g0146241 | 26.923 | 182 | 122 | 4 | 48 | 220 | 886 | 1065 | 3.62e-12 | 70.9 |
Msa0164830 | MtrunA17_Chr1g0146241 | 29.834 | 181 | 115 | 4 | 460 | 630 | 890 | 1068 | 6.22e-12 | 70.1 |
Msa0164830 | MtrunA17_Chr7g0255401 | 29.119 | 261 | 165 | 6 | 330 | 582 | 1167 | 1415 | 1.19e-20 | 98.6 |
Msa0164830 | MtrunA17_Chr7g0255401 | 38.938 | 113 | 68 | 1 | 58 | 170 | 1300 | 1411 | 1.84e-14 | 78.2 |
Msa0164830 | MtrunA17_Chr7g0255401 | 25.749 | 334 | 183 | 9 | 541 | 850 | 1123 | 1415 | 9.74e-14 | 75.9 |
Msa0164830 | MtrunA17_Chr7g0255401 | 25.817 | 306 | 178 | 9 | 353 | 627 | 713 | 1000 | 8.78e-13 | 72.8 |
Msa0164830 | MtrunA17_Chr7g0255401 | 23.905 | 548 | 313 | 20 | 472 | 930 | 718 | 1250 | 6.01e-11 | 67.0 |
Msa0164830 | MtrunA17_Chr1g0172091 | 53.125 | 64 | 27 | 1 | 357 | 417 | 1 | 64 | 2.31e-13 | 65.9 |
Msa0164830 | MtrunA17_Chr1g0164041 | 49.333 | 75 | 30 | 2 | 350 | 416 | 11 | 85 | 2.94e-13 | 66.6 |
Msa0164830 | MtrunA17_Chr2g0313511 | 34.234 | 111 | 63 | 3 | 144 | 252 | 1 | 103 | 4.26e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 158 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAACCTCATAGTGTATTT+AGG | 0.121632 | 1_4:-44684765 | None:intergenic |
TTCCATACATGCTTCAATTT+TGG | 0.123196 | 1_4:-44684735 | None:intergenic |
GATATTGAGCTCATCATTTC+TGG | 0.135457 | 1_4:-44685117 | None:intergenic |
CATCATTTCTGGACCTTTCT+TGG | 0.154970 | 1_4:-44685106 | None:intergenic |
ATTCCATATGTGCTTCAATT+TGG | 0.174375 | 1_4:-44686713 | None:intergenic |
GCCTATTAAGTTTCCGTTGC+TGG | 0.250090 | 1_4:+44686070 | Msa0164830:CDS |
GAAACCTCATAGTGTATTTA+GGG | 0.257128 | 1_4:-44684764 | None:intergenic |
GCCTTAAATAGCTCTATTCT+TGG | 0.261127 | 1_4:-44685068 | None:intergenic |
ATTCTGCACAACAATTTCTT+TGG | 0.266851 | 1_4:-44684676 | None:intergenic |
ACTTGAAATGTTTCAACATT+AGG | 0.270534 | 1_4:-44687389 | None:intergenic |
AGCACTTGCATTACATTTGA+TGG | 0.273037 | 1_4:-44686556 | None:intergenic |
CTTCAACTTGAATTCCTATC+AGG | 0.274032 | 1_4:-44687967 | None:intergenic |
GACTCAAACAGTTGGAATTA+TGG | 0.281199 | 1_4:+44685649 | Msa0164830:CDS |
TCCAAGAATAGAGCTATTTA+AGG | 0.286421 | 1_4:+44685067 | Msa0164830:CDS |
CTGGAGGAATTGGCAGTAAA+TGG | 0.311807 | 1_4:+44687239 | Msa0164830:CDS |
AACTTGAGCATAACACATTT+AGG | 0.319990 | 1_4:+44684502 | Msa0164830:CDS |
GGTCAAGTACTCAAGTTTAA+TGG | 0.325519 | 1_4:-44684970 | None:intergenic |
AACTTAAGGCATTCTTTGTT+GGG | 0.326747 | 1_4:+44684994 | Msa0164830:CDS |
TTCCATATGTGCTTCAATTT+GGG | 0.328113 | 1_4:-44686712 | None:intergenic |
ATATTGCAGAGCCAATATTC+AGG | 0.330271 | 1_4:+44685436 | Msa0164830:CDS |
AGATCTAGGCATAGTGAATA+TGG | 0.333855 | 1_4:-44686817 | None:intergenic |
TGAATTGAAACCCTGAATAT+TGG | 0.341348 | 1_4:-44685447 | None:intergenic |
CTCATATGTTCCTTCTTCCT+TGG | 0.342981 | 1_4:-44684916 | None:intergenic |
AACAAAGAATGCCTTAAGTT+TGG | 0.345305 | 1_4:-44684991 | None:intergenic |
ATCCCGAGTTAAAAGAATTC+TGG | 0.350819 | 1_4:+44684472 | Msa0164830:CDS |
ACATCTTTCACAAATTTAAC+CGG | 0.352228 | 1_4:+44687632 | Msa0164830:CDS |
ACAACATCATAACTTTCAAT+TGG | 0.352492 | 1_4:-44686936 | None:intergenic |
CAACATCATAACTTTCAATT+GGG | 0.354607 | 1_4:-44686935 | None:intergenic |
CAACATTAGGAAATATTGTA+TGG | 0.354619 | 1_4:-44687376 | None:intergenic |
CACGTAACTCTTCAAGATAT+TGG | 0.358073 | 1_4:-44687568 | None:intergenic |
ACTGCCAATTCCTCCAGATT+GGG | 0.369542 | 1_4:-44687233 | None:intergenic |
TACTGCCAATTCCTCCAGAT+TGG | 0.375301 | 1_4:-44687234 | None:intergenic |
GAGCCCCAATCTGGAGGAAT+TGG | 0.375430 | 1_4:+44687229 | Msa0164830:CDS |
TTGAATGATCAGGTTGCATT+TGG | 0.381430 | 1_4:+44686397 | Msa0164830:intron |
CTCTTATGATTTCTTCACCT+TGG | 0.385572 | 1_4:-44685599 | None:intergenic |
TACCCAAATTGAAGCACATA+TGG | 0.385745 | 1_4:+44686710 | Msa0164830:CDS |
TGGTAAAGCTTGAGCACATC+TGG | 0.386083 | 1_4:+44687513 | Msa0164830:CDS |
AAACTTAAGGCATTCTTTGT+TGG | 0.396154 | 1_4:+44684993 | Msa0164830:CDS |
TTCCAAAATTGAAGCATGTA+TGG | 0.396331 | 1_4:+44684733 | Msa0164830:CDS |
CCTCATGAAATCATCAGCTT+TGG | 0.402492 | 1_4:+44686742 | Msa0164830:CDS |
TCCAGCAACGGAAACTTAAT+AGG | 0.408692 | 1_4:-44686071 | None:intergenic |
CAATACAAAACAGGGGTTGT+TGG | 0.409389 | 1_4:-44687125 | None:intergenic |
AGAAATCATAAGAGGAGAAA+AGG | 0.412719 | 1_4:+44685608 | Msa0164830:CDS |
TTTCAAGATGGCCAAGATCT+AGG | 0.425826 | 1_4:-44686831 | None:intergenic |
GAAACATTGTTCCCCACTAA+AGG | 0.429589 | 1_4:+44687428 | Msa0164830:CDS |
AACTTCAAAGTCTTCTAGTA+AGG | 0.436615 | 1_4:+44684868 | Msa0164830:CDS |
AAACTGATGAAGAAAATCAT+TGG | 0.438662 | 1_4:+44686174 | Msa0164830:CDS |
TGAACAATTGTTCATAGATA+AGG | 0.450356 | 1_4:+44688030 | Msa0164830:CDS |
ATAACTTGTGGTTCCTTTAG+TGG | 0.450843 | 1_4:-44687441 | None:intergenic |
GTTTGAGAAGCTTCTGCTCT+GGG | 0.454631 | 1_4:+44687849 | Msa0164830:CDS |
TGTTTGAGAAGCTTCTGCTC+TGG | 0.455941 | 1_4:+44687848 | Msa0164830:CDS |
TAACTTGTGGTTCCTTTAGT+GGG | 0.456441 | 1_4:-44687440 | None:intergenic |
AAATTTAACCGGGTTGGAAG+TGG | 0.456784 | 1_4:+44687643 | Msa0164830:CDS |
GTAAATGGCACAGATATGTT+GGG | 0.457022 | 1_4:+44687254 | Msa0164830:CDS |
ACGACGAAACGAACTAAAGA+TGG | 0.457741 | 1_4:-44687890 | None:intergenic |
ATCCTGAGCTAAAGGATTTG+TGG | 0.463255 | 1_4:+44686449 | Msa0164830:CDS |
GACCTTTCTTGGTGTCTCAA+AGG | 0.464164 | 1_4:-44685095 | None:intergenic |
TCAATGTTTGGAGTTGAACT+AGG | 0.464435 | 1_4:-44687715 | None:intergenic |
ATTCCAACTGTTTGAGTCGC+AGG | 0.466553 | 1_4:-44685644 | None:intergenic |
AGTAAATGGCACAGATATGT+TGG | 0.472824 | 1_4:+44687253 | Msa0164830:CDS |
AACTGATGAAGAAAATCATT+GGG | 0.473133 | 1_4:+44686175 | Msa0164830:CDS |
TTACTCGGTTGATGAAAATC+AGG | 0.473315 | 1_4:+44687092 | Msa0164830:CDS |
GTCTGACTATCCTGAGCTAA+AGG | 0.482567 | 1_4:+44686441 | Msa0164830:CDS |
GAAATTGTTGCCAAGGAAGA+AGG | 0.484292 | 1_4:+44684906 | Msa0164830:CDS |
TGAGTACTTGACCAAACTTA+AGG | 0.485661 | 1_4:+44684980 | Msa0164830:CDS |
AAAGAATTGTGAGAAGATGT+TGG | 0.487041 | 1_4:+44687742 | Msa0164830:CDS |
TTGTCCAAGTTTGATAAGCT+TGG | 0.487783 | 1_4:+44687598 | Msa0164830:CDS |
GGTACCAAGCTTATCAAACT+TGG | 0.490598 | 1_4:-44687602 | None:intergenic |
TTAAATGATGTATCTGTTGT+GGG | 0.490922 | 1_4:+44684792 | Msa0164830:CDS |
TATTCACTATGCCTAGATCT+TGG | 0.491321 | 1_4:+44686820 | Msa0164830:CDS |
CAAGGTGAAGAAATCATAAG+AGG | 0.497835 | 1_4:+44685600 | Msa0164830:CDS |
CTGCCAATTCCTCCAGATTG+GGG | 0.499723 | 1_4:-44687232 | None:intergenic |
AAATCATTCAGAAGAATAGT+TGG | 0.499968 | 1_4:-44687353 | None:intergenic |
TATTGCAGAGCCAATATTCA+GGG | 0.499986 | 1_4:+44685437 | Msa0164830:CDS |
AACGGAAACTTAATAGGCCA+TGG | 0.500365 | 1_4:-44686065 | None:intergenic |
TTTCACAAATTTAACCGGGT+TGG | 0.500522 | 1_4:+44687637 | Msa0164830:CDS |
ATTTGAAAACATGGAACACT+TGG | 0.504144 | 1_4:+44687808 | Msa0164830:CDS |
ACATTCAAAGTCTTCAATGA+AGG | 0.506881 | 1_4:-44687012 | None:intergenic |
GCTAGAAGTGCTGATGAACT+TGG | 0.507481 | 1_4:+44684590 | Msa0164830:CDS |
ACTTGAATTCCTATCAGGTA+TGG | 0.507968 | 1_4:-44687962 | None:intergenic |
TTGAAGAAAATAATATGCTA+TGG | 0.516123 | 1_4:+44687984 | Msa0164830:CDS |
TGAGAAGATGTTGGACGTTG+TGG | 0.517137 | 1_4:+44687751 | Msa0164830:CDS |
TACCACAAATCCTTTAGCTC+AGG | 0.518399 | 1_4:-44686451 | None:intergenic |
TTTAAATGATGTATCTGTTG+TGG | 0.519915 | 1_4:+44684791 | Msa0164830:CDS |
AGTGGACAACTGCAAAGGGC+TGG | 0.522266 | 1_4:+44687661 | Msa0164830:CDS |
GAGCTAAAGGATTTGTGGTA+TGG | 0.522270 | 1_4:+44686454 | Msa0164830:CDS |
CTTGGAAGAATTAGTTGTGG+AGG | 0.526608 | 1_4:+44684608 | Msa0164830:CDS |
ACAGTGTCACCATACCTGAT+AGG | 0.528139 | 1_4:+44687953 | Msa0164830:CDS |
AGACTTTCAACAACCTTACT+CGG | 0.530336 | 1_4:+44687077 | Msa0164830:CDS |
GTCTTCTAGTAAGGGAGTGT+GGG | 0.532786 | 1_4:+44684877 | Msa0164830:CDS |
GAAGCAGTGTTTGATGTGAA+AGG | 0.535622 | 1_4:+44686622 | Msa0164830:CDS |
AATGCAAGTGCTTCAGACAT+TGG | 0.538735 | 1_4:+44686567 | Msa0164830:CDS |
TGGAAGTGGACAACTGCAAA+GGG | 0.541425 | 1_4:+44687657 | Msa0164830:CDS |
TAGAACTAATTTCTTTACAA+AGG | 0.543602 | 1_4:+44686021 | Msa0164830:CDS |
GAAAATAATATGCTATGGAA+AGG | 0.545648 | 1_4:+44687989 | Msa0164830:CDS |
CATTCAAAGTCTTCAATGAA+GGG | 0.546998 | 1_4:-44687011 | None:intergenic |
GATAAAGTCTTGTGGAGTCA+AGG | 0.549502 | 1_4:+44686861 | Msa0164830:CDS |
AAAATTGAAGCATGTATGGA+AGG | 0.552332 | 1_4:+44684737 | Msa0164830:CDS |
ACCTCTCTTTGTGATTGAAG+AGG | 0.554593 | 1_4:+44685151 | Msa0164830:CDS |
AGTCTTCTAGTAAGGGAGTG+TGG | 0.555502 | 1_4:+44684876 | Msa0164830:CDS |
TTCTTCACAGAGATATTCCA+AGG | 0.555855 | 1_4:+44685582 | Msa0164830:intron |
AATCTGAAGAGTTTCTATCA+AGG | 0.556732 | 1_4:+44686970 | Msa0164830:CDS |
CAATTTGAAACATCTTGTTG+TGG | 0.557711 | 1_4:+44686501 | Msa0164830:CDS |
TTGCAAACTAAGATAACTTG+TGG | 0.558067 | 1_4:-44687453 | None:intergenic |
AAAGCTTGAGCACATCTGGC+AGG | 0.558070 | 1_4:+44687517 | Msa0164830:CDS |
TTATCTTAAGCATTTCAAGA+TGG | 0.558519 | 1_4:-44686843 | None:intergenic |
CATCTTTCACAAATTTAACC+GGG | 0.558561 | 1_4:+44687633 | Msa0164830:CDS |
TTTGTGAAAGATGTTGATGA+TGG | 0.558693 | 1_4:-44687623 | None:intergenic |
TGTCAAAGAATGTCCTCGAA+TGG | 0.560502 | 1_4:+44686103 | Msa0164830:CDS |
ATTGAAGCACATATGGAATG+AGG | 0.563816 | 1_4:+44686717 | Msa0164830:CDS |
TGAAACATCTTGTTGTGGAA+AGG | 0.565094 | 1_4:+44686506 | Msa0164830:CDS |
TCGCCTGCGACTCAAACAGT+TGG | 0.566855 | 1_4:+44685641 | Msa0164830:CDS |
TTGGAAGTGGACAACTGCAA+AGG | 0.567313 | 1_4:+44687656 | Msa0164830:CDS |
ACTTAAGGCATTCTTTGTTG+GGG | 0.570990 | 1_4:+44684995 | Msa0164830:CDS |
TGGAAATAGCATGGGTGGTG+AGG | 0.572093 | 1_4:+44682156 | None:intergenic |
GTTAGTTTGAAAGAGTACAT+TGG | 0.573280 | 1_4:-44684565 | None:intergenic |
ACTTCAAAGTCTTCTAGTAA+GGG | 0.574892 | 1_4:+44684869 | Msa0164830:CDS |
GATTCAAGAAATTGTTGCCA+AGG | 0.575699 | 1_4:+44684899 | Msa0164830:CDS |
CCAAAGCTGATGATTTCATG+AGG | 0.576418 | 1_4:-44686742 | None:intergenic |
AGCCTTTGAGACACCAAGAA+AGG | 0.578733 | 1_4:+44685093 | Msa0164830:CDS |
ATATCTCTAGCAACTGAGAG+TGG | 0.578808 | 1_4:-44684840 | None:intergenic |
AATGGAAGAAGCTAGATCAA+TGG | 0.579184 | 1_4:+44686894 | Msa0164830:CDS |
ATGCTTAAGATAAAGTCTTG+TGG | 0.581275 | 1_4:+44686853 | Msa0164830:CDS |
GCAGTTGTCCACTTCCAACC+CGG | 0.581360 | 1_4:-44687651 | None:intergenic |
AGGACCCTAAATACACTATG+AGG | 0.581381 | 1_4:+44684760 | Msa0164830:CDS |
AACATCATAACTTTCAATTG+GGG | 0.582571 | 1_4:-44686934 | None:intergenic |
CGACGAAACGAACTAAAGAT+GGG | 0.591294 | 1_4:-44687889 | None:intergenic |
AGTCAAGGAAATTGTTGCAA+TGG | 0.591392 | 1_4:+44686876 | Msa0164830:CDS |
AACTTGTGGTTCCTTTAGTG+GGG | 0.592481 | 1_4:-44687439 | None:intergenic |
GAGTTAAAAGAATTCTGGTA+TGG | 0.594040 | 1_4:+44684477 | Msa0164830:CDS |
TAGGAGCTTGAAGCATCTAG+TGG | 0.596466 | 1_4:+44684521 | Msa0164830:CDS |
CAAATCAAATAAGAAAGTTG+TGG | 0.596512 | 1_4:+44687480 | Msa0164830:CDS |
ACCTCTTCAATCACAAAGAG+AGG | 0.598137 | 1_4:-44685152 | None:intergenic |
TAACATCGTATTTGAAAACA+TGG | 0.603130 | 1_4:+44687799 | Msa0164830:CDS |
GATATGTTGGGGATATTGAG+TGG | 0.603151 | 1_4:+44687266 | Msa0164830:CDS |
ACAAGTACAACTTCCAGCAA+CGG | 0.604211 | 1_4:-44686083 | None:intergenic |
TCAGTTGAGCCCCAATCTGG+AGG | 0.604908 | 1_4:+44687223 | Msa0164830:intron |
AATGAAAAGATTCTCATCAG+AGG | 0.608064 | 1_4:+44687928 | Msa0164830:CDS |
TGATGAAGAAAATCATTGGG+AGG | 0.609886 | 1_4:+44686178 | Msa0164830:CDS |
GATGAAGAAAATCATTGGGA+GGG | 0.611061 | 1_4:+44686179 | Msa0164830:CDS |
GCAACAGGTAGTTGCCAATG+TGG | 0.616511 | 1_4:+44685378 | Msa0164830:intron |
TAGCAACTGAGAGTGGAAAG+AGG | 0.617107 | 1_4:-44684833 | None:intergenic |
TGGAACGGAGGATAATCCAA+TGG | 0.623280 | 1_4:-44687548 | None:intergenic |
AGTTTAATGGAAGTCAAATG+AGG | 0.627247 | 1_4:-44684957 | None:intergenic |
ATTAGTGGAAATAGCATGGG+TGG | 0.628257 | 1_4:+44682151 | None:intergenic |
GAACTTGGAAGAATTAGTTG+TGG | 0.630429 | 1_4:+44684605 | Msa0164830:CDS |
ACGGAAACTTAATAGGCCAT+GGG | 0.634004 | 1_4:-44686064 | None:intergenic |
ATTGAAGCATGTATGGAAGG+AGG | 0.634962 | 1_4:+44684740 | Msa0164830:CDS |
AACATTAGACACATAACCGT+GGG | 0.635957 | 1_4:+44685472 | Msa0164830:CDS |
AACTCTTCAAGATATTGGAA+CGG | 0.641365 | 1_4:-44687563 | None:intergenic |
TAAATGGCACAGATATGTTG+GGG | 0.643052 | 1_4:+44687255 | Msa0164830:CDS |
TCTTCAAGATATTGGAACGG+AGG | 0.659401 | 1_4:-44687560 | None:intergenic |
CAAAGACAAACTCTCCACAT+TGG | 0.661086 | 1_4:-44685392 | None:intergenic |
GAAGCTTCTCAAACATGACA+AGG | 0.664875 | 1_4:-44687840 | None:intergenic |
CAACATTAGACACATAACCG+TGG | 0.696033 | 1_4:+44685471 | Msa0164830:CDS |
CTTTGGAAACTTATGCACAG+TGG | 0.704512 | 1_4:+44686759 | Msa0164830:CDS |
TAGCTCAGGATAGTCAGACA+AGG | 0.710708 | 1_4:-44686437 | None:intergenic |
TAAAGAAGATGAGACAAACG+AGG | 0.781420 | 1_4:+44685974 | Msa0164830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAATTAAAATATTAAAGA+GGG | - | chr1_4:44682802-44682821 | Msa0164820:intron | 10.0% |
!!! | TTAATATTTTAATTCATCAT+TGG | + | chr1_4:44682805-44682824 | Msa0164830:intron | 10.0% |
!!! | ATTCTTTAATTTATTCTTTT+CGG | - | chr1_4:44682846-44682865 | Msa0164820:intron | 10.0% |
!!! | ATCATAAAACATTTTATTTA+CGG | - | chr1_4:44686219-44686238 | None:intergenic | 10.0% |
!!! | AAATAAAATGTTTTATGATA+AGG | + | chr1_4:44686220-44686239 | Msa0164830:CDS | 10.0% |
!! | TGAATTAAAATATTAAAGAG+GGG | - | chr1_4:44682801-44682820 | Msa0164820:intron | 15.0% |
!! | GATGAATTAAAATATTAAAG+AGG | - | chr1_4:44682803-44682822 | Msa0164820:intron | 15.0% |
!!! | TTCTTTAATTTATTCTTTTC+GGG | - | chr1_4:44682845-44682864 | Msa0164820:intron | 15.0% |
!!! | TAATTCTGCAAATATTTTTT+GGG | - | chr1_4:44683097-44683116 | Msa0164820:intron | 15.0% |
!!! | ATAATTCTGCAAATATTTTT+TGG | - | chr1_4:44683098-44683117 | Msa0164820:intron | 15.0% |
!!! | ATTTATTAATTTGAATGATC+AGG | + | chr1_4:44686387-44686406 | Msa0164830:intron | 15.0% |
!!! | AATTCTTTATTTTCAATGTT+TGG | - | chr1_4:44687730-44687749 | None:intergenic | 15.0% |
!!! | TCAAAGAAGTTTTAGAATAT+GGG | - | chr1_4:44683044-44683063 | Msa0164820:intron | 20.0% |
!!! | AATTCTGCAAATATTTTTTG+GGG | - | chr1_4:44683096-44683115 | Msa0164820:intron | 20.0% |
!! | GAGAAAAAATATGTTATTGA+GGG | - | chr1_4:44683325-44683344 | Msa0164820:CDS | 20.0% |
!! | AGATGTTGCTAAATTAAATA+AGG | - | chr1_4:44683486-44683505 | None:intergenic | 20.0% |
!! | AATAAAAGAGGTAAATTGTT+TGG | - | chr1_4:44683533-44683552 | None:intergenic | 20.0% |
!! | ATGAATATGATCAGATATAT+TGG | + | chr1_4:44683622-44683641 | Msa0164830:intron | 20.0% |
!! | CAACGATATATCATTATTAT+AGG | - | chr1_4:44684084-44684103 | None:intergenic | 20.0% |
!! | CTATAATAATGATATATCGT+TGG | + | chr1_4:44684082-44684101 | Msa0164830:intron | 20.0% |
!! | TTGAAAAAGATCAAATTGTT+TGG | + | chr1_4:44685041-44685060 | Msa0164830:CDS | 20.0% |
!!! | TTTAATTTTGTTTTTGCAAC+AGG | + | chr1_4:44685363-44685382 | Msa0164830:intron | 20.0% |
!!! | TCTTTGAACAAAAAAGATTT+TGG | + | chr1_4:44685409-44685428 | Msa0164830:CDS | 20.0% |
!!! | ATTTTTCAAGAACCAAAATA+TGG | - | chr1_4:44685526-44685545 | None:intergenic | 20.0% |
!! | TGAAGATTAAAATGTGTAAT+TGG | + | chr1_4:44685938-44685957 | Msa0164830:intron | 20.0% |
!! | TAGAACTAATTTCTTTACAA+AGG | + | chr1_4:44686021-44686040 | Msa0164830:CDS | 20.0% |
!! | TAGATAGTCAAATAAATTGA+TGG | - | chr1_4:44686264-44686283 | None:intergenic | 20.0% |
!!! | TGTGTAATTTATCTTCATTT+TGG | + | chr1_4:44687188-44687207 | Msa0164830:intron | 20.0% |
!! | TTGAAGAAAATAATATGCTA+TGG | + | chr1_4:44687984-44688003 | Msa0164830:CDS | 20.0% |
! | ATGTTCTTGAATAGTATTCT+CGG | + | chr1_4:44682418-44682437 | Msa0164830:intron | 25.0% |
! | AATGTCAAAGTTATACCAAT+GGG | - | chr1_4:44682938-44682957 | Msa0164820:intron | 25.0% |
!!! | CTCAAAGAAGTTTTAGAATA+TGG | - | chr1_4:44683045-44683064 | Msa0164820:intron | 25.0% |
!!! | ATTCTGCAAATATTTTTTGG+GGG | - | chr1_4:44683095-44683114 | Msa0164820:intron | 25.0% |
!! | TCTTTTGTTGATGTTATTGT+TGG | - | chr1_4:44683128-44683147 | Msa0164820:intron | 25.0% |
! | AACAATAACATCAACAAAAG+AGG | + | chr1_4:44683127-44683146 | Msa0164830:intron | 25.0% |
! | GGAGAAAAAATATGTTATTG+AGG | - | chr1_4:44683326-44683345 | Msa0164820:CDS | 25.0% |
! | GAAAATAGTAAGCATGTTAA+GGG | - | chr1_4:44683368-44683387 | Msa0164820:CDS | 25.0% |
! | AGAAAATAGTAAGCATGTTA+AGG | - | chr1_4:44683369-44683388 | Msa0164820:CDS | 25.0% |
!! | ATTATCTGAAACTGAGATAA+GGG | - | chr1_4:44683604-44683623 | None:intergenic | 25.0% |
! | ATGATTACATCTCAAGATAT+GGG | - | chr1_4:44683934-44683953 | Msa0164840:CDS | 25.0% |
! | TATGATTACATCTCAAGATA+TGG | - | chr1_4:44683935-44683954 | Msa0164840:CDS | 25.0% |
!!! | ATACCAGAATTCTTTTAACT+CGG | - | chr1_4:44684478-44684497 | None:intergenic | 25.0% |
! | TTTAAATGATGTATCTGTTG+TGG | + | chr1_4:44684791-44684810 | Msa0164830:CDS | 25.0% |
! | TTAAATGATGTATCTGTTGT+GGG | + | chr1_4:44684792-44684811 | Msa0164830:CDS | 25.0% |
! | TTCAATGTTATGTTCATTTG+AGG | + | chr1_4:44685225-44685244 | Msa0164830:intron | 25.0% |
! | AAACTGATGAAGAAAATCAT+TGG | + | chr1_4:44686174-44686193 | Msa0164830:CDS | 25.0% |
! | AACTGATGAAGAAAATCATT+GGG | + | chr1_4:44686175-44686194 | Msa0164830:CDS | 25.0% |
! | TTATCTTAAGCATTTCAAGA+TGG | - | chr1_4:44686846-44686865 | None:intergenic | 25.0% |
! | AACATCATAACTTTCAATTG+GGG | - | chr1_4:44686937-44686956 | None:intergenic | 25.0% |
! | CAACATCATAACTTTCAATT+GGG | - | chr1_4:44686938-44686957 | None:intergenic | 25.0% |
! | ACAACATCATAACTTTCAAT+TGG | - | chr1_4:44686939-44686958 | None:intergenic | 25.0% |
!! | TACCTTTTCAATACAAAACA+GGG | - | chr1_4:44687136-44687155 | None:intergenic | 25.0% |
!! | TTACCTTTTCAATACAAAAC+AGG | - | chr1_4:44687137-44687156 | None:intergenic | 25.0% |
! | ACATACAATAAAGAACAACA+AGG | - | chr1_4:44687171-44687190 | None:intergenic | 25.0% |
! | AAATCATTCAGAAGAATAGT+TGG | - | chr1_4:44687356-44687375 | None:intergenic | 25.0% |
! | CAACATTAGGAAATATTGTA+TGG | - | chr1_4:44687379-44687398 | None:intergenic | 25.0% |
! | ACTTGAAATGTTTCAACATT+AGG | - | chr1_4:44687392-44687411 | None:intergenic | 25.0% |
! | CAAATCAAATAAGAAAGTTG+TGG | + | chr1_4:44687480-44687499 | Msa0164830:CDS | 25.0% |
! | ACATCTTTCACAAATTTAAC+CGG | + | chr1_4:44687632-44687651 | Msa0164830:CDS | 25.0% |
! | TAACATCGTATTTGAAAACA+TGG | + | chr1_4:44687799-44687818 | Msa0164830:CDS | 25.0% |
!! | ATGAGAATCTTTTCATTTGA+GGG | - | chr1_4:44687925-44687944 | None:intergenic | 25.0% |
! | GAAAATAATATGCTATGGAA+AGG | + | chr1_4:44687989-44688008 | Msa0164830:CDS | 25.0% |
! | TGAACAATTGTTCATAGATA+AGG | + | chr1_4:44688030-44688049 | Msa0164830:CDS | 25.0% |
! | ATATTAATCTGGTGAATGTT+TGG | + | chr1_4:44688109-44688128 | Msa0164830:intron | 25.0% |
TTTACCATTGTCTCATCATT+TGG | - | chr1_4:44682213-44682232 | Msa0164820:CDS | 30.0% | |
TGTATCTACTTCTAACAAAG+CGG | - | chr1_4:44682339-44682358 | Msa0164820:intron | 30.0% | |
TCAAGAACATAATGCTTCTT+TGG | - | chr1_4:44682408-44682427 | Msa0164820:CDS | 30.0% | |
TCAATGATATGTTCATGTTC+AGG | + | chr1_4:44682482-44682501 | Msa0164830:intron | 30.0% | |
! | GAGTTCAGAATTTTCAAATC+TGG | - | chr1_4:44682516-44682535 | Msa0164820:CDS | 30.0% |
ATTGTCGAAGAATTAAAGCT+CGG | - | chr1_4:44682581-44682600 | Msa0164820:intron | 30.0% | |
! | TATTTCTATCACTTCTTTGG+AGG | - | chr1_4:44682639-44682658 | Msa0164820:intron | 30.0% |
!! | CCTTATTTCTATCACTTCTT+TGG | - | chr1_4:44682642-44682661 | Msa0164820:intron | 30.0% |
CCAAAGAAGTGATAGAAATA+AGG | + | chr1_4:44682639-44682658 | Msa0164830:intron | 30.0% | |
TTTAATTCATCATTGGACCA+AGG | + | chr1_4:44682812-44682831 | Msa0164830:intron | 30.0% | |
AAATGTCATGACTGTTACTA+CGG | - | chr1_4:44682879-44682898 | Msa0164820:intron | 30.0% | |
GAATGTCAAAGTTATACCAA+TGG | - | chr1_4:44682939-44682958 | Msa0164820:intron | 30.0% | |
AGCAGAAAATTAAAGATGTG+GGG | - | chr1_4:44682967-44682986 | Msa0164820:intron | 30.0% | |
CAGCAGAAAATTAAAGATGT+GGG | - | chr1_4:44682968-44682987 | Msa0164820:intron | 30.0% | |
!!! | TTCTGCAAATATTTTTTGGG+GGG | - | chr1_4:44683094-44683113 | Msa0164820:intron | 30.0% |
AAACATGTGGTTAATGTTGA+AGG | - | chr1_4:44683173-44683192 | Msa0164820:intron | 30.0% | |
AATTTCTTGTTCAAGGAAAG+AGG | - | chr1_4:44683275-44683294 | Msa0164820:CDS | 30.0% | |
AGAGATCAATTTCTTGTTCA+AGG | - | chr1_4:44683282-44683301 | Msa0164820:CDS | 30.0% | |
GGAGTTAAGAATCATATTGA+GGG | - | chr1_4:44683347-44683366 | Msa0164820:CDS | 30.0% | |
GTTAGTAATAACCATTACGA+GGG | - | chr1_4:44683392-44683411 | Msa0164820:CDS | 30.0% | |
TGTTAGTAATAACCATTACG+AGG | - | chr1_4:44683393-44683412 | Msa0164820:CDS | 30.0% | |
TCACGCTATAGAAATAAAAG+AGG | - | chr1_4:44683545-44683564 | None:intergenic | 30.0% | |
! | CATTATCTGAAACTGAGATA+AGG | - | chr1_4:44683605-44683624 | None:intergenic | 30.0% |
CCTAAAATTATTAGCAGTGT+CGG | - | chr1_4:44683705-44683724 | None:intergenic | 30.0% | |
! | TATAATCCACACTTTTACTG+TGG | + | chr1_4:44684338-44684357 | Msa0164830:intron | 30.0% |
! | ATAATCCACACTTTTACTGT+GGG | + | chr1_4:44684339-44684358 | Msa0164830:intron | 30.0% |
!!! | ATACAATTGTTTTTGCAGGT+GGG | + | chr1_4:44684414-44684433 | Msa0164830:intron | 30.0% |
!! | TACCAGAATTCTTTTAACTC+GGG | - | chr1_4:44684477-44684496 | None:intergenic | 30.0% |
GAGTTAAAAGAATTCTGGTA+TGG | + | chr1_4:44684477-44684496 | Msa0164830:CDS | 30.0% | |
AACTTGAGCATAACACATTT+AGG | + | chr1_4:44684502-44684521 | Msa0164830:CDS | 30.0% | |
! | GTTAGTTTGAAAGAGTACAT+TGG | - | chr1_4:44684568-44684587 | None:intergenic | 30.0% |
ATTCTGCACAACAATTTCTT+TGG | - | chr1_4:44684679-44684698 | None:intergenic | 30.0% | |
TTCCAAAATTGAAGCATGTA+TGG | + | chr1_4:44684733-44684752 | Msa0164830:CDS | 30.0% | |
! | TTCCATACATGCTTCAATTT+TGG | - | chr1_4:44684738-44684757 | None:intergenic | 30.0% |
AAAATTGAAGCATGTATGGA+AGG | + | chr1_4:44684737-44684756 | Msa0164830:CDS | 30.0% | |
GAAACCTCATAGTGTATTTA+GGG | - | chr1_4:44684767-44684786 | None:intergenic | 30.0% | |
TGAAACCTCATAGTGTATTT+AGG | - | chr1_4:44684768-44684787 | None:intergenic | 30.0% | |
AACTTCAAAGTCTTCTAGTA+AGG | + | chr1_4:44684868-44684887 | Msa0164830:CDS | 30.0% | |
ACTTCAAAGTCTTCTAGTAA+GGG | + | chr1_4:44684869-44684888 | Msa0164830:CDS | 30.0% | |
AGTTTAATGGAAGTCAAATG+AGG | - | chr1_4:44684960-44684979 | None:intergenic | 30.0% | |
AACAAAGAATGCCTTAAGTT+TGG | - | chr1_4:44684994-44685013 | None:intergenic | 30.0% | |
! | AAACTTAAGGCATTCTTTGT+TGG | + | chr1_4:44684993-44685012 | Msa0164830:CDS | 30.0% |
! | AACTTAAGGCATTCTTTGTT+GGG | + | chr1_4:44684994-44685013 | Msa0164830:CDS | 30.0% |
TCCAAGAATAGAGCTATTTA+AGG | + | chr1_4:44685067-44685086 | Msa0164830:CDS | 30.0% | |
TGAATTGAAACCCTGAATAT+TGG | - | chr1_4:44685450-44685469 | None:intergenic | 30.0% | |
AGAAATCATAAGAGGAGAAA+AGG | + | chr1_4:44685608-44685627 | Msa0164830:CDS | 30.0% | |
CTTCAATGTATATGCAAAGA+AGG | + | chr1_4:44685684-44685703 | Msa0164830:intron | 30.0% | |
! | AGGATTTAAGATGACCTATT+TGG | + | chr1_4:44685704-44685723 | Msa0164830:intron | 30.0% |
CAAATAGGTCATGTTACTAA+AGG | - | chr1_4:44685842-44685861 | None:intergenic | 30.0% | |
CTTTAGTAACATGACCTATT+TGG | + | chr1_4:44685840-44685859 | Msa0164830:intron | 30.0% | |
AATGAAAAAAGTTCCATTCG+AGG | - | chr1_4:44686119-44686138 | None:intergenic | 30.0% | |
!!! | TCGAATGGAACTTTTTTCAT+TGG | + | chr1_4:44686118-44686137 | Msa0164830:CDS | 30.0% |
!!! | CGAATGGAACTTTTTTCATT+GGG | + | chr1_4:44686119-44686138 | Msa0164830:CDS | 30.0% |
!! | ATTTTGAAGATTTCGTGTGT+TGG | - | chr1_4:44686150-44686169 | None:intergenic | 30.0% |
!! | TTTTATTTACGGTTCTGTTG+AGG | - | chr1_4:44686208-44686227 | None:intergenic | 30.0% |
! | CTAGATCATGATCATTTTGA+TGG | + | chr1_4:44686285-44686304 | Msa0164830:intron | 30.0% |
! | CAATTTGAAACATCTTGTTG+TGG | + | chr1_4:44686501-44686520 | Msa0164830:CDS | 30.0% |
TTCCATATGTGCTTCAATTT+GGG | - | chr1_4:44686715-44686734 | None:intergenic | 30.0% | |
ATTCCATATGTGCTTCAATT+TGG | - | chr1_4:44686716-44686735 | None:intergenic | 30.0% | |
ATGCTTAAGATAAAGTCTTG+TGG | + | chr1_4:44686853-44686872 | Msa0164830:CDS | 30.0% | |
AATCTGAAGAGTTTCTATCA+AGG | + | chr1_4:44686970-44686989 | Msa0164830:CDS | 30.0% | |
CATTCAAAGTCTTCAATGAA+GGG | - | chr1_4:44687014-44687033 | None:intergenic | 30.0% | |
ACATTCAAAGTCTTCAATGA+AGG | - | chr1_4:44687015-44687034 | None:intergenic | 30.0% | |
! | ACCTTTTCAATACAAAACAG+GGG | - | chr1_4:44687135-44687154 | None:intergenic | 30.0% |
TTGCAAACTAAGATAACTTG+TGG | - | chr1_4:44687456-44687475 | None:intergenic | 30.0% | |
! | AAAGTTGTGGCTTTTTGAAT+TGG | + | chr1_4:44687493-44687512 | Msa0164830:CDS | 30.0% |
AACTCTTCAAGATATTGGAA+CGG | - | chr1_4:44687566-44687585 | None:intergenic | 30.0% | |
! | TTTGTGAAAGATGTTGATGA+TGG | - | chr1_4:44687626-44687645 | None:intergenic | 30.0% |
CATCTTTCACAAATTTAACC+GGG | + | chr1_4:44687633-44687652 | Msa0164830:CDS | 30.0% | |
AAAGAATTGTGAGAAGATGT+TGG | + | chr1_4:44687742-44687761 | Msa0164830:CDS | 30.0% | |
ATTTGAAAACATGGAACACT+TGG | + | chr1_4:44687808-44687827 | Msa0164830:CDS | 30.0% | |
! | GATGAGAATCTTTTCATTTG+AGG | - | chr1_4:44687926-44687945 | None:intergenic | 30.0% |
AATGAAAAGATTCTCATCAG+AGG | + | chr1_4:44687928-44687947 | Msa0164830:CDS | 30.0% | |
! | TTTTATTCCTATAGTTGTCG+AGG | + | chr1_4:44688081-44688100 | Msa0164830:intron | 30.0% |
! | TGTGAGCATGATTTTGTGAT+TGG | + | chr1_4:44682237-44682256 | Msa0164830:intron | 35.0% |
!! | GCATGATTTTGTGATTGGTT+TGG | + | chr1_4:44682242-44682261 | Msa0164830:intron | 35.0% |
!!! | TGATTTTGTGATTGGTTTGG+TGG | + | chr1_4:44682245-44682264 | Msa0164830:intron | 35.0% |
TTGTCACAGCAAATCTTGAA+CGG | - | chr1_4:44682682-44682701 | Msa0164820:intron | 35.0% | |
GCATATGTTGAAAAACTGAG+TGG | + | chr1_4:44682736-44682755 | Msa0164830:intron | 35.0% | |
TAAAATATTAAAGAGGGGCG+TGG | - | chr1_4:44682796-44682815 | Msa0164820:intron | 35.0% | |
CCAGCAGAAAATTAAAGATG+TGG | - | chr1_4:44682969-44682988 | Msa0164820:intron | 35.0% | |
!! | CCACATCTTTAATTTTCTGC+TGG | + | chr1_4:44682966-44682985 | Msa0164830:intron | 35.0% |
! | TTTAGAATATGGGCGAGTAT+GGG | - | chr1_4:44683034-44683053 | Msa0164820:intron | 35.0% |
!!! | TTTTAGAATATGGGCGAGTA+TGG | - | chr1_4:44683035-44683054 | Msa0164820:intron | 35.0% |
!!! | TCTGCAAATATTTTTTGGGG+GGG | - | chr1_4:44683093-44683112 | Msa0164820:intron | 35.0% |
GTTAGACTAGAAATCGCTAA+TGG | - | chr1_4:44683199-44683218 | Msa0164820:intron | 35.0% | |
!! | AAGGAAAGAGGTATTTCAGT+TGG | - | chr1_4:44683263-44683282 | Msa0164820:intron | 35.0% |
GGGAGTTAAGAATCATATTG+AGG | - | chr1_4:44683348-44683367 | Msa0164820:CDS | 35.0% | |
! | TACTATTTTCTCCCTCGTAA+TGG | + | chr1_4:44683378-44683397 | Msa0164830:intron | 35.0% |
CTAACATTGCATGTTTCGAT+AGG | - | chr1_4:44683424-44683443 | Msa0164820:CDS | 35.0% | |
CTTTGCTCATCTTAAGGTTT+GGG | - | chr1_4:44683447-44683466 | Msa0164820:CDS | 35.0% | |
TCTTTGCTCATCTTAAGGTT+TGG | - | chr1_4:44683448-44683467 | Msa0164820:CDS | 35.0% | |
TGTTGTCTTTGCTCATCTTA+AGG | - | chr1_4:44683453-44683472 | Msa0164820:CDS | 35.0% | |
TAGAAAGTAGCTATGAAGCA+CGG | + | chr1_4:44683650-44683669 | Msa0164830:intron | 35.0% | |
! | CCGACACTGCTAATAATTTT+AGG | + | chr1_4:44683702-44683721 | Msa0164830:intron | 35.0% |
! | TTCTCAAGGCATTCTGATAA+TGG | - | chr1_4:44683818-44683837 | Msa0164840:CDS | 35.0% |
!! | AAGAAGTATGTTGGTTCTCA+AGG | - | chr1_4:44683832-44683851 | Msa0164840:CDS | 35.0% |
AGAACCAACATACTTCTTTG+AGG | + | chr1_4:44683834-44683853 | Msa0164830:intron | 35.0% | |
! | CATTCCTCAAAGAAGTATGT+TGG | - | chr1_4:44683841-44683860 | Msa0164840:CDS | 35.0% |
GAATGCTAGAGTAGCAATTA+GGG | + | chr1_4:44683978-44683997 | Msa0164830:intron | 35.0% | |
!!! | TTGCGCTATTTTGATGATCA+TGG | - | chr1_4:44684010-44684029 | None:intergenic | 35.0% |
CAATAGAAAGAACTGACAGA+TGG | + | chr1_4:44684267-44684286 | Msa0164830:intron | 35.0% | |
ATACACTAGCATAGTAGCAT+TGG | - | chr1_4:44684321-44684340 | None:intergenic | 35.0% | |
!!! | CACGATACAATTGTTTTTGC+AGG | + | chr1_4:44684410-44684429 | Msa0164830:intron | 35.0% |
!!! | GATACAATTGTTTTTGCAGG+TGG | + | chr1_4:44684413-44684432 | Msa0164830:intron | 35.0% |
ATCCCGAGTTAAAAGAATTC+TGG | + | chr1_4:44684472-44684491 | Msa0164830:CDS | 35.0% | |
GAACTTGGAAGAATTAGTTG+TGG | + | chr1_4:44684605-44684624 | Msa0164830:CDS | 35.0% | |
GATTCAAGAAATTGTTGCCA+AGG | + | chr1_4:44684899-44684918 | Msa0164830:CDS | 35.0% | |
GGTCAAGTACTCAAGTTTAA+TGG | - | chr1_4:44684973-44684992 | None:intergenic | 35.0% | |
TGAGTACTTGACCAAACTTA+AGG | + | chr1_4:44684980-44684999 | Msa0164830:CDS | 35.0% | |
! | ACTTAAGGCATTCTTTGTTG+GGG | + | chr1_4:44684995-44685014 | Msa0164830:CDS | 35.0% |
! | GCCTTAAATAGCTCTATTCT+TGG | - | chr1_4:44685071-44685090 | None:intergenic | 35.0% |
GATATTGAGCTCATCATTTC+TGG | - | chr1_4:44685120-44685139 | None:intergenic | 35.0% | |
ATATTGCAGAGCCAATATTC+AGG | + | chr1_4:44685436-44685455 | Msa0164830:CDS | 35.0% | |
TATTGCAGAGCCAATATTCA+GGG | + | chr1_4:44685437-44685456 | Msa0164830:CDS | 35.0% | |
AACATTAGACACATAACCGT+GGG | + | chr1_4:44685472-44685491 | Msa0164830:CDS | 35.0% | |
TTTATTGTAGAACTCACCCA+CGG | - | chr1_4:44685491-44685510 | None:intergenic | 35.0% | |
!!! | GAGGCTACTTTTCCATATTT+TGG | + | chr1_4:44685511-44685530 | Msa0164830:intron | 35.0% |
! | TCCTAATTCTGAAAGCTTGT+TGG | + | chr1_4:44685548-44685567 | Msa0164830:intron | 35.0% |
ACCAACAAGCTTTCAGAATT+AGG | - | chr1_4:44685552-44685571 | None:intergenic | 35.0% | |
TTCTTCACAGAGATATTCCA+AGG | + | chr1_4:44685582-44685601 | Msa0164830:intron | 35.0% | |
CTCTTATGATTTCTTCACCT+TGG | - | chr1_4:44685602-44685621 | None:intergenic | 35.0% | |
CAAGGTGAAGAAATCATAAG+AGG | + | chr1_4:44685600-44685619 | Msa0164830:CDS | 35.0% | |
GACTCAAACAGTTGGAATTA+TGG | + | chr1_4:44685649-44685668 | Msa0164830:CDS | 35.0% | |
GCTTCAAACAGTTGGAATTA+TGG | + | chr1_4:44685732-44685751 | Msa0164830:intron | 35.0% | |
TTACTAAAGGTAACACAGGA+TGG | - | chr1_4:44685829-44685848 | None:intergenic | 35.0% | |
CATGTTACTAAAGGTAACAC+AGG | - | chr1_4:44685833-44685852 | None:intergenic | 35.0% | |
TAGTAACATGACCTATTTGG+AGG | + | chr1_4:44685843-44685862 | Msa0164830:intron | 35.0% | |
GTGTAATTGGCTATAGTCAA+CGG | + | chr1_4:44685951-44685970 | Msa0164830:intron | 35.0% | |
TAAAGAAGATGAGACAAACG+AGG | + | chr1_4:44685974-44685993 | Msa0164830:CDS | 35.0% | |
TGATGAAGAAAATCATTGGG+AGG | + | chr1_4:44686178-44686197 | Msa0164830:CDS | 35.0% | |
GATGAAGAAAATCATTGGGA+GGG | + | chr1_4:44686179-44686198 | Msa0164830:CDS | 35.0% | |
! | TTGAATGATCAGGTTGCATT+TGG | + | chr1_4:44686397-44686416 | Msa0164830:intron | 35.0% |
! | TGAAACATCTTGTTGTGGAA+AGG | + | chr1_4:44686506-44686525 | Msa0164830:CDS | 35.0% |
AGCACTTGCATTACATTTGA+TGG | - | chr1_4:44686559-44686578 | None:intergenic | 35.0% | |
TACCCAAATTGAAGCACATA+TGG | + | chr1_4:44686710-44686729 | Msa0164830:CDS | 35.0% | |
ATTGAAGCACATATGGAATG+AGG | + | chr1_4:44686717-44686736 | Msa0164830:CDS | 35.0% | |
AGATCTAGGCATAGTGAATA+TGG | - | chr1_4:44686820-44686839 | None:intergenic | 35.0% | |
TATTCACTATGCCTAGATCT+TGG | + | chr1_4:44686820-44686839 | Msa0164830:CDS | 35.0% | |
AGTCAAGGAAATTGTTGCAA+TGG | + | chr1_4:44686876-44686895 | Msa0164830:CDS | 35.0% | |
AATGGAAGAAGCTAGATCAA+TGG | + | chr1_4:44686894-44686913 | Msa0164830:CDS | 35.0% | |
AGACTTTCAACAACCTTACT+CGG | + | chr1_4:44687077-44687096 | Msa0164830:CDS | 35.0% | |
! | TGATTTTCATCAACCGAGTA+AGG | - | chr1_4:44687093-44687112 | None:intergenic | 35.0% |
!! | TTACTCGGTTGATGAAAATC+AGG | + | chr1_4:44687092-44687111 | Msa0164830:CDS | 35.0% |
! | ACCCCTGTTTTGTATTGAAA+AGG | + | chr1_4:44687131-44687150 | Msa0164830:CDS | 35.0% |
AGTAAATGGCACAGATATGT+TGG | + | chr1_4:44687253-44687272 | Msa0164830:CDS | 35.0% | |
GTAAATGGCACAGATATGTT+GGG | + | chr1_4:44687254-44687273 | Msa0164830:CDS | 35.0% | |
TAAATGGCACAGATATGTTG+GGG | + | chr1_4:44687255-44687274 | Msa0164830:CDS | 35.0% | |
! | TAACTTGTGGTTCCTTTAGT+GGG | - | chr1_4:44687443-44687462 | None:intergenic | 35.0% |
! | ATAACTTGTGGTTCCTTTAG+TGG | - | chr1_4:44687444-44687463 | None:intergenic | 35.0% |
CACGTAACTCTTCAAGATAT+TGG | - | chr1_4:44687571-44687590 | None:intergenic | 35.0% | |
TTGTCCAAGTTTGATAAGCT+TGG | + | chr1_4:44687598-44687617 | Msa0164830:CDS | 35.0% | |
TTTCACAAATTTAACCGGGT+TGG | + | chr1_4:44687637-44687656 | Msa0164830:CDS | 35.0% | |
! | TCAATGTTTGGAGTTGAACT+AGG | - | chr1_4:44687718-44687737 | None:intergenic | 35.0% |
ACTTGAATTCCTATCAGGTA+TGG | - | chr1_4:44687965-44687984 | None:intergenic | 35.0% | |
CTTCAACTTGAATTCCTATC+AGG | - | chr1_4:44687970-44687989 | None:intergenic | 35.0% | |
TCGAGGCTCATATATTAATC+TGG | + | chr1_4:44688098-44688117 | Msa0164830:intron | 35.0% | |
TGAGAGGATTTGGGCAATAT+AGG | + | chr1_4:44682179-44682198 | Msa0164830:intron | 40.0% | |
CCATTGTCTCATCATTTGGT+TGG | - | chr1_4:44682209-44682228 | Msa0164820:CDS | 40.0% | |
CCAACCAAATGATGAGACAA+TGG | + | chr1_4:44682206-44682225 | Msa0164830:intron | 40.0% | |
TCCTGCAGTAGAAACTATCT+CGG | + | chr1_4:44682283-44682302 | Msa0164830:intron | 40.0% | |
TTTGACAACTAGACATCCCT+TGG | + | chr1_4:44682361-44682380 | Msa0164830:intron | 40.0% | |
TCCTCAAAACAAACATCAGC+CGG | + | chr1_4:44682551-44682570 | Msa0164830:intron | 40.0% | |
AAGTCTACCAAACATCGAAG+AGG | + | chr1_4:44682714-44682733 | Msa0164830:intron | 40.0% | |
ACATATGCCTCTTCGATGTT+TGG | - | chr1_4:44682724-44682743 | Msa0164820:intron | 40.0% | |
GTTGAAAAACTGAGTGGTCT+AGG | + | chr1_4:44682742-44682761 | Msa0164830:intron | 40.0% | |
AACACATTAACAGCACCCAT+TGG | + | chr1_4:44682920-44682939 | Msa0164830:intron | 40.0% | |
GCTATAGCAAGAGTCTTGAA+TGG | - | chr1_4:44683009-44683028 | Msa0164820:intron | 40.0% | |
TTAGAATATGGGCGAGTATG+GGG | - | chr1_4:44683033-44683052 | Msa0164820:intron | 40.0% | |
TCGCTAATGGCAAAAACATG+TGG | - | chr1_4:44683186-44683205 | Msa0164820:intron | 40.0% | |
GCATGTTTCGATAGGTTTAG+TGG | - | chr1_4:44683416-44683435 | Msa0164820:CDS | 40.0% | |
TGAGGTTTGCGGTATCTTAA+TGG | - | chr1_4:44683579-44683598 | None:intergenic | 40.0% | |
! | AGATAAGGGTTTGAGGTTTG+CGG | - | chr1_4:44683590-44683609 | None:intergenic | 40.0% |
GAAACTGAGATAAGGGTTTG+AGG | - | chr1_4:44683597-44683616 | None:intergenic | 40.0% | |
TGGACACTTCTCAGATTAGT+CGG | - | chr1_4:44683777-44683796 | None:intergenic | 40.0% | |
!! | GGCTACTTTGAAATGAAGCA+TGG | - | chr1_4:44683797-44683816 | None:intergenic | 40.0% |
! | TGAAAGTGTGACGATGAATG+CGG | + | chr1_4:44683875-44683894 | Msa0164830:intron | 40.0% |
AGATATGGGTTTCAATCACG+TGG | - | chr1_4:44683920-44683939 | Msa0164840:CDS | 40.0% | |
! | TTGTTGTTGCGATAGCAGAT+AGG | + | chr1_4:44683956-44683975 | Msa0164830:intron | 40.0% |
GGAATGCTAGAGTAGCAATT+AGG | + | chr1_4:44683977-44683996 | Msa0164830:intron | 40.0% | |
CAAACCACTTGCACATGAAT+AGG | + | chr1_4:44684027-44684046 | Msa0164830:intron | 40.0% | |
! | CTAGCATAGTAGCATTGGAT+GGG | - | chr1_4:44684316-44684335 | None:intergenic | 40.0% |
! | ACTAGCATAGTAGCATTGGA+TGG | - | chr1_4:44684317-44684336 | None:intergenic | 40.0% |
GATATCCCACAGTAAAAGTG+TGG | - | chr1_4:44684347-44684366 | None:intergenic | 40.0% | |
!!! | TTGTTTTTGCAGGTGGGATT+TGG | + | chr1_4:44684420-44684439 | Msa0164830:intron | 40.0% |
CTTGGAAGAATTAGTTGTGG+AGG | + | chr1_4:44684608-44684627 | Msa0164830:CDS | 40.0% | |
ATTGAAGCATGTATGGAAGG+AGG | + | chr1_4:44684740-44684759 | Msa0164830:CDS | 40.0% | |
AGGACCCTAAATACACTATG+AGG | + | chr1_4:44684760-44684779 | Msa0164830:CDS | 40.0% | |
ATATCTCTAGCAACTGAGAG+TGG | - | chr1_4:44684843-44684862 | None:intergenic | 40.0% | |
GAAATTGTTGCCAAGGAAGA+AGG | + | chr1_4:44684906-44684925 | Msa0164830:CDS | 40.0% | |
CTCATATGTTCCTTCTTCCT+TGG | - | chr1_4:44684919-44684938 | None:intergenic | 40.0% | |
! | CATCATTTCTGGACCTTTCT+TGG | - | chr1_4:44685109-44685128 | None:intergenic | 40.0% |
ACCTCTCTTTGTGATTGAAG+AGG | + | chr1_4:44685151-44685170 | Msa0164830:CDS | 40.0% | |
ACCTCTTCAATCACAAAGAG+AGG | - | chr1_4:44685155-44685174 | None:intergenic | 40.0% | |
CTCTTTGTGATTGAAGAGGT+AGG | + | chr1_4:44685155-44685174 | Msa0164830:intron | 40.0% | |
CAAAGACAAACTCTCCACAT+TGG | - | chr1_4:44685395-44685414 | None:intergenic | 40.0% | |
CAACATTAGACACATAACCG+TGG | + | chr1_4:44685471-44685490 | Msa0164830:CDS | 40.0% | |
GGGTGAGTTCTACAATAAAG+AGG | + | chr1_4:44685492-44685511 | Msa0164830:intron | 40.0% | |
TCTCTGTGAAGAAACTCCAT+TGG | - | chr1_4:44685575-44685594 | None:intergenic | 40.0% | |
! | GTTTGAAGCAGACTCCAAAT+AGG | - | chr1_4:44685721-44685740 | None:intergenic | 40.0% |
GCAGTTTGATACCTCCAAAT+AGG | - | chr1_4:44685857-44685876 | None:intergenic | 40.0% | |
!! | TTGGAGGTATCAAACTGCAA+TGG | + | chr1_4:44685859-44685878 | Msa0164830:intron | 40.0% |
!! | TGGAGGTATCAAACTGCAAT+GGG | + | chr1_4:44685860-44685879 | Msa0164830:intron | 40.0% |
ACGGAAACTTAATAGGCCAT+GGG | - | chr1_4:44686067-44686086 | None:intergenic | 40.0% | |
AACGGAAACTTAATAGGCCA+TGG | - | chr1_4:44686068-44686087 | None:intergenic | 40.0% | |
TCCAGCAACGGAAACTTAAT+AGG | - | chr1_4:44686074-44686093 | None:intergenic | 40.0% | |
ACAAGTACAACTTCCAGCAA+CGG | - | chr1_4:44686086-44686105 | None:intergenic | 40.0% | |
TGTCAAAGAATGTCCTCGAA+TGG | + | chr1_4:44686103-44686122 | Msa0164830:CDS | 40.0% | |
ATCCTGAGCTAAAGGATTTG+TGG | + | chr1_4:44686449-44686468 | Msa0164830:CDS | 40.0% | |
! | TACCACAAATCCTTTAGCTC+AGG | - | chr1_4:44686454-44686473 | None:intergenic | 40.0% |
GAGCTAAAGGATTTGTGGTA+TGG | + | chr1_4:44686454-44686473 | Msa0164830:CDS | 40.0% | |
AATGCAAGTGCTTCAGACAT+TGG | + | chr1_4:44686567-44686586 | Msa0164830:CDS | 40.0% | |
GAAGCAGTGTTTGATGTGAA+AGG | + | chr1_4:44686622-44686641 | Msa0164830:CDS | 40.0% | |
CCAAAGCTGATGATTTCATG+AGG | - | chr1_4:44686745-44686764 | None:intergenic | 40.0% | |
CCTCATGAAATCATCAGCTT+TGG | + | chr1_4:44686742-44686761 | Msa0164830:CDS | 40.0% | |
! | CTTTGGAAACTTATGCACAG+TGG | + | chr1_4:44686759-44686778 | Msa0164830:CDS | 40.0% |
TTTCAAGATGGCCAAGATCT+AGG | - | chr1_4:44686834-44686853 | None:intergenic | 40.0% | |
! | GATAAAGTCTTGTGGAGTCA+AGG | + | chr1_4:44686861-44686880 | Msa0164830:CDS | 40.0% |
CAATACAAAACAGGGGTTGT+TGG | - | chr1_4:44687128-44687147 | None:intergenic | 40.0% | |
GATATGTTGGGGATATTGAG+TGG | + | chr1_4:44687266-44687285 | Msa0164830:CDS | 40.0% | |
GAAACATTGTTCCCCACTAA+AGG | + | chr1_4:44687428-44687447 | Msa0164830:CDS | 40.0% | |
AACTTGTGGTTCCTTTAGTG+GGG | - | chr1_4:44687442-44687461 | None:intergenic | 40.0% | |
TCTTCAAGATATTGGAACGG+AGG | - | chr1_4:44687563-44687582 | None:intergenic | 40.0% | |
GGTACCAAGCTTATCAAACT+TGG | - | chr1_4:44687605-44687624 | None:intergenic | 40.0% | |
! | AAATTTAACCGGGTTGGAAG+TGG | + | chr1_4:44687643-44687662 | Msa0164830:CDS | 40.0% |
GATTGACGATGAAAAAGCAG+AGG | + | chr1_4:44687775-44687794 | Msa0164830:CDS | 40.0% | |
GAAGCTTCTCAAACATGACA+AGG | - | chr1_4:44687843-44687862 | None:intergenic | 40.0% | |
CGACGAAACGAACTAAAGAT+GGG | - | chr1_4:44687892-44687911 | None:intergenic | 40.0% | |
ACGACGAAACGAACTAAAGA+TGG | - | chr1_4:44687893-44687912 | None:intergenic | 40.0% | |
ATATGAGCCTCGACAACTAT+AGG | - | chr1_4:44688091-44688110 | None:intergenic | 40.0% | |
ACCGAGATAGTTTCTACTGC+AGG | - | chr1_4:44682287-44682306 | Msa0164820:intron | 45.0% | |
CGGTTCAAAGCGAGATAGAT+AGG | + | chr1_4:44682303-44682322 | Msa0164830:intron | 45.0% | |
CCTCAAAACAAACATCAGCC+GGG | + | chr1_4:44682552-44682571 | Msa0164830:intron | 45.0% | |
AGAATTAAAGCTCGGTCTCC+CGG | - | chr1_4:44682573-44682592 | Msa0164820:intron | 45.0% | |
CATCATTGGACCAAGGACAA+AGG | + | chr1_4:44682819-44682838 | Msa0164830:intron | 45.0% | |
! | AGTCATGACATTTTCCGTGC+CGG | + | chr1_4:44682886-44682905 | Msa0164830:intron | 45.0% |
!! | AATGTGTTCCTGACTTGCTC+CGG | - | chr1_4:44682908-44682927 | Msa0164820:intron | 45.0% |
TAGAATATGGGCGAGTATGG+GGG | - | chr1_4:44683032-44683051 | Msa0164820:intron | 45.0% | |
! | GAAGGTGCGAATGATGAGAT+AGG | - | chr1_4:44683155-44683174 | Msa0164820:intron | 45.0% |
GTCTGTATCTGTGTCGTGTA+CGG | - | chr1_4:44683679-44683698 | None:intergenic | 45.0% | |
! | GGACACTTCTCAGATTAGTC+GGG | - | chr1_4:44683776-44683795 | None:intergenic | 45.0% |
CACTTGCACATGAATAGGAC+CGG | + | chr1_4:44684032-44684051 | Msa0164830:intron | 45.0% | |
GAGCTAACGTTGCGACTTAT+GGG | + | chr1_4:44684057-44684076 | Msa0164830:intron | 45.0% | |
! | TAGGAGCTTGAAGCATCTAG+TGG | + | chr1_4:44684521-44684540 | Msa0164830:CDS | 45.0% |
!! | GCTAGAAGTGCTGATGAACT+TGG | + | chr1_4:44684590-44684609 | Msa0164830:CDS | 45.0% |
TAGCAACTGAGAGTGGAAAG+AGG | - | chr1_4:44684836-44684855 | None:intergenic | 45.0% | |
AGTCTTCTAGTAAGGGAGTG+TGG | + | chr1_4:44684876-44684895 | Msa0164830:CDS | 45.0% | |
! | GTCTTCTAGTAAGGGAGTGT+GGG | + | chr1_4:44684877-44684896 | Msa0164830:CDS | 45.0% |
!! | AGCCTTTGAGACACCAAGAA+AGG | + | chr1_4:44685093-44685112 | Msa0164830:CDS | 45.0% |
!! | GACCTTTCTTGGTGTCTCAA+AGG | - | chr1_4:44685098-44685117 | None:intergenic | 45.0% |
!! | CTGAAAGCTTGTTGGTCCAA+TGG | + | chr1_4:44685556-44685575 | Msa0164830:intron | 45.0% |
ATTCCAACTGTTTGAGTCGC+AGG | - | chr1_4:44685647-44685666 | None:intergenic | 45.0% | |
TGGAGTCTGCTTCAAACAGT+TGG | + | chr1_4:44685724-44685743 | Msa0164830:intron | 45.0% | |
GTGTTCGAGTCTGACAAAGT+TGG | + | chr1_4:44685801-44685820 | Msa0164830:intron | 45.0% | |
!!! | GTTGTTTTTGCTCATGCCCA+TGG | + | chr1_4:44686048-44686067 | Msa0164830:CDS | 45.0% |
GCCTATTAAGTTTCCGTTGC+TGG | + | chr1_4:44686070-44686089 | Msa0164830:CDS | 45.0% | |
TAGCTCAGGATAGTCAGACA+AGG | - | chr1_4:44686440-44686459 | None:intergenic | 45.0% | |
GTCTGACTATCCTGAGCTAA+AGG | + | chr1_4:44686441-44686460 | Msa0164830:CDS | 45.0% | |
! | TTTTCAGTTGAGCCCCAATC+TGG | + | chr1_4:44687220-44687239 | Msa0164830:intron | 45.0% |
ACTGCCAATTCCTCCAGATT+GGG | - | chr1_4:44687236-44687255 | None:intergenic | 45.0% | |
TACTGCCAATTCCTCCAGAT+TGG | - | chr1_4:44687237-44687256 | None:intergenic | 45.0% | |
CTGGAGGAATTGGCAGTAAA+TGG | + | chr1_4:44687239-44687258 | Msa0164830:CDS | 45.0% | |
TGGTAAAGCTTGAGCACATC+TGG | + | chr1_4:44687513-44687532 | Msa0164830:CDS | 45.0% | |
! | CTGGCAGGAAGATTTTCCAT+TGG | + | chr1_4:44687532-44687551 | Msa0164830:CDS | 45.0% |
TGGAACGGAGGATAATCCAA+TGG | - | chr1_4:44687551-44687570 | None:intergenic | 45.0% | |
TTGGAAGTGGACAACTGCAA+AGG | + | chr1_4:44687656-44687675 | Msa0164830:CDS | 45.0% | |
TGGAAGTGGACAACTGCAAA+GGG | + | chr1_4:44687657-44687676 | Msa0164830:CDS | 45.0% | |
TGAGAAGATGTTGGACGTTG+TGG | + | chr1_4:44687751-44687770 | Msa0164830:CDS | 45.0% | |
TGTTTGAGAAGCTTCTGCTC+TGG | + | chr1_4:44687848-44687867 | Msa0164830:CDS | 45.0% | |
GTTTGAGAAGCTTCTGCTCT+GGG | + | chr1_4:44687849-44687868 | Msa0164830:CDS | 45.0% | |
ACAGTGTCACCATACCTGAT+AGG | + | chr1_4:44687953-44687972 | Msa0164830:CDS | 45.0% | |
GTGGTGAGGTGAGAGGATTT+GGG | + | chr1_4:44682170-44682189 | Msa0164830:intron | 50.0% | |
ACTAGACATCCCTTGGCAAG+TGG | + | chr1_4:44682368-44682387 | Msa0164830:intron | 50.0% | |
AAGCTACCACCACTTGCCAA+GGG | - | chr1_4:44682380-44682399 | Msa0164820:CDS | 50.0% | |
!!! | CCCGGCTGATGTTTGTTTTG+AGG | - | chr1_4:44682555-44682574 | Msa0164820:intron | 50.0% |
TGAGTGGTCTAGGCATGCAA+AGG | + | chr1_4:44682752-44682771 | Msa0164830:intron | 50.0% | |
GAGTGGTCTAGGCATGCAAA+GGG | + | chr1_4:44682753-44682772 | Msa0164830:intron | 50.0% | |
!! | TCTTTTCGGGCCTTTGTCCT+TGG | - | chr1_4:44682832-44682851 | Msa0164820:intron | 50.0% |
AGAATATGGGCGAGTATGGG+GGG | - | chr1_4:44683031-44683050 | Msa0164820:intron | 50.0% | |
TGACGATGAATGCGGCTTAC+AGG | + | chr1_4:44683883-44683902 | Msa0164830:intron | 50.0% | |
TTCAATCACGTGGCAGGTCA+AGG | - | chr1_4:44683910-44683929 | Msa0164840:CDS | 50.0% | |
ATGGGTTTCAATCACGTGGC+AGG | - | chr1_4:44683916-44683935 | Msa0164840:CDS | 50.0% | |
CGGTCCTATTCATGTGCAAG+TGG | - | chr1_4:44684034-44684053 | None:intergenic | 50.0% | |
TTGCACATGAATAGGACCGG+TGG | + | chr1_4:44684035-44684054 | Msa0164830:intron | 50.0% | |
GGAGCTAACGTTGCGACTTA+TGG | + | chr1_4:44684056-44684075 | Msa0164830:intron | 50.0% | |
GCAACAGGTAGTTGCCAATG+TGG | + | chr1_4:44685378-44685397 | Msa0164830:intron | 50.0% | |
CTGCCAATTCCTCCAGATTG+GGG | - | chr1_4:44687235-44687254 | None:intergenic | 50.0% | |
AAAGCTTGAGCACATCTGGC+AGG | + | chr1_4:44687517-44687536 | Msa0164830:CDS | 50.0% | |
GGTGGTGAGGTGAGAGGATT+TGG | + | chr1_4:44682169-44682188 | Msa0164830:intron | 55.0% | |
AGACATCCCTTGGCAAGTGG+TGG | + | chr1_4:44682371-44682390 | Msa0164830:intron | 55.0% | |
CAAGCTACCACCACTTGCCA+AGG | - | chr1_4:44682381-44682400 | Msa0164820:CDS | 55.0% | |
CTTGGCAAGTGGTGGTAGCT+TGG | + | chr1_4:44682379-44682398 | Msa0164830:intron | 55.0% | |
GGGGCGTGGTTACGACTATA+TGG | - | chr1_4:44682782-44682801 | Msa0164820:intron | 55.0% | |
TGGGGGGGAAGATGTATGTC+AGG | - | chr1_4:44683078-44683097 | Msa0164820:intron | 55.0% | |
AGTCGCAACGTTAGCTCCAC+CGG | - | chr1_4:44684054-44684073 | None:intergenic | 55.0% | |
TCGCCTGCGACTCAAACAGT+TGG | + | chr1_4:44685641-44685660 | Msa0164830:CDS | 55.0% | |
TCAGTTGAGCCCCAATCTGG+AGG | + | chr1_4:44687223-44687242 | Msa0164830:intron | 55.0% | |
GAGCCCCAATCTGGAGGAAT+TGG | + | chr1_4:44687229-44687248 | Msa0164830:CDS | 55.0% | |
GCAGTTGTCCACTTCCAACC+CGG | - | chr1_4:44687654-44687673 | None:intergenic | 55.0% | |
AGTGGACAACTGCAAAGGGC+TGG | + | chr1_4:44687661-44687680 | Msa0164830:CDS | 55.0% | |
TTTCCGTGCCGGAGCAAGTC+AGG | + | chr1_4:44682897-44682916 | Msa0164830:intron | 60.0% | |
!! | GTTCCTGACTTGCTCCGGCA+CGG | - | chr1_4:44682903-44682922 | Msa0164820:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 44682166 | 44688138 | 44682166 | ID=Msa0164830;Name=Msa0164830 |
chr1_4 | mRNA | 44682166 | 44688138 | 44682166 | ID=Msa0164830-mRNA-1;Parent=Msa0164830;Name=Msa0164830-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.28|0|0.75|1|1|8|0|935 |
chr1_4 | exon | 44682166 | 44682177 | 44682166 | ID=Msa0164830-mRNA-1:exon:12831;Parent=Msa0164830-mRNA-1 |
chr1_4 | exon | 44684432 | 44685172 | 44684432 | ID=Msa0164830-mRNA-1:exon:12832;Parent=Msa0164830-mRNA-1 |
chr1_4 | exon | 44685385 | 44685493 | 44685385 | ID=Msa0164830-mRNA-1:exon:12833;Parent=Msa0164830-mRNA-1 |
chr1_4 | exon | 44685592 | 44685690 | 44685592 | ID=Msa0164830-mRNA-1:exon:12834;Parent=Msa0164830-mRNA-1 |
chr1_4 | exon | 44685967 | 44686241 | 44685967 | ID=Msa0164830-mRNA-1:exon:12835;Parent=Msa0164830-mRNA-1 |
chr1_4 | exon | 44686409 | 44687152 | 44686409 | ID=Msa0164830-mRNA-1:exon:12836;Parent=Msa0164830-mRNA-1 |
chr1_4 | exon | 44687227 | 44688051 | 44687227 | ID=Msa0164830-mRNA-1:exon:12837;Parent=Msa0164830-mRNA-1 |
chr1_4 | exon | 44688136 | 44688138 | 44688136 | ID=Msa0164830-mRNA-1:exon:12838;Parent=Msa0164830-mRNA-1 |
chr1_4 | CDS | 44682166 | 44682177 | 44682166 | ID=Msa0164830-mRNA-1:cds;Parent=Msa0164830-mRNA-1 |
chr1_4 | CDS | 44684432 | 44685172 | 44684432 | ID=Msa0164830-mRNA-1:cds;Parent=Msa0164830-mRNA-1 |
chr1_4 | CDS | 44685385 | 44685493 | 44685385 | ID=Msa0164830-mRNA-1:cds;Parent=Msa0164830-mRNA-1 |
chr1_4 | CDS | 44685592 | 44685690 | 44685592 | ID=Msa0164830-mRNA-1:cds;Parent=Msa0164830-mRNA-1 |
chr1_4 | CDS | 44685967 | 44686241 | 44685967 | ID=Msa0164830-mRNA-1:cds;Parent=Msa0164830-mRNA-1 |
chr1_4 | CDS | 44686409 | 44687152 | 44686409 | ID=Msa0164830-mRNA-1:cds;Parent=Msa0164830-mRNA-1 |
chr1_4 | CDS | 44687227 | 44688051 | 44687227 | ID=Msa0164830-mRNA-1:cds;Parent=Msa0164830-mRNA-1 |
chr1_4 | CDS | 44688136 | 44688138 | 44688136 | ID=Msa0164830-mRNA-1:cds;Parent=Msa0164830-mRNA-1 |
Gene Sequence |
Protein sequence |