AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0167070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0167070 MtrunA17_Chr1g0182711 100.000 446 0 0 1 446 1 446 0.0 899
Msa0167070 MtrunA17_Chr7g0262801 96.644 447 12 2 1 446 1 445 0.0 862
Msa0167070 MtrunA17_Chr4g0050561 52.000 325 155 1 115 438 83 407 4.26e-114 341
Msa0167070 MtrunA17_Chr1g0192151 44.670 394 186 3 65 437 34 416 3.70e-113 339
Msa0167070 MtrunA17_Chr4g0014731 45.000 380 188 1 79 437 38 417 1.39e-112 337
Msa0167070 MtrunA17_Chr3g0108321 52.769 307 140 3 68 372 40 343 1.85e-112 335
Msa0167070 MtrunA17_Chr3g0145011 46.361 371 192 2 74 437 18 388 1.38e-107 324
Msa0167070 MtrunA17_Chr3g0141901 45.251 358 196 0 80 437 28 385 5.75e-106 320
Msa0167070 MtrunA17_Chr8g0345461 46.334 341 175 3 112 446 85 423 7.80e-105 318
Msa0167070 MtrunA17_Chr1g0200081 49.201 313 154 3 136 446 123 432 1.74e-101 309
Msa0167070 MtrunA17_Chr7g0217421 44.490 245 135 1 189 433 40 283 2.06e-61 204
Msa0167070 MtrunA17_Chr7g0264521 47.137 227 117 1 190 416 208 431 5.12e-61 212
Msa0167070 MtrunA17_Chr7g0264521 41.026 234 138 0 182 415 473 706 1.31e-53 191
Msa0167070 MtrunA17_Chr1g0180791 46.696 227 118 1 190 416 207 430 3.26e-60 210
Msa0167070 MtrunA17_Chr1g0180791 41.453 234 137 0 182 415 472 705 1.80e-54 194
Msa0167070 MtrunA17_Chr4g0052411 40.816 245 144 1 189 433 230 473 1.10e-56 199
Msa0167070 MtrunA17_Chr2g0327121 45.815 227 120 2 190 416 209 432 2.72e-56 199
Msa0167070 MtrunA17_Chr2g0327121 41.453 234 137 0 182 415 474 707 2.40e-53 191
Msa0167070 MtrunA17_Chr2g0297281 41.224 245 143 1 189 433 287 530 2.22e-55 196
Msa0167070 MtrunA17_Chr7g0248361 37.377 305 177 5 142 433 136 439 2.64e-55 194
Msa0167070 MtrunA17_Chr4g0031821 43.320 247 136 3 190 433 322 567 5.55e-55 195
Msa0167070 MtrunA17_Chr7g0255651 38.683 243 149 0 173 415 267 509 3.25e-54 190
Msa0167070 MtrunA17_Chr7g0255651 26.496 234 158 4 211 432 36 267 6.36e-19 89.4
Msa0167070 MtrunA17_Chr7g0260601 42.972 249 134 4 190 433 242 487 4.15e-53 189
Msa0167070 MtrunA17_Chr3g0094871 41.870 246 140 2 190 433 13 257 7.76e-53 183
Msa0167070 MtrunA17_Chr6g0476861 39.576 283 165 4 156 433 163 444 1.12e-52 187
Msa0167070 MtrunA17_Chr3g0143721 40.000 245 146 1 189 433 250 493 1.94e-52 187
Msa0167070 MtrunA17_Chr8g0388371 39.442 251 143 2 190 432 406 655 2.39e-52 189
Msa0167070 MtrunA17_Chr5g0429571 42.126 254 139 4 183 431 308 558 2.52e-51 185
Msa0167070 MtrunA17_Chr3g0104211 41.667 252 143 3 183 431 299 549 3.18e-50 182
Msa0167070 MtrunA17_Chr7g0255691 37.786 262 161 1 173 432 271 532 3.47e-49 176
Msa0167070 MtrunA17_Chr7g0255691 29.545 220 149 3 193 408 22 239 2.07e-24 105
Msa0167070 MtrunA17_Chr8g0362771 39.754 244 144 2 190 433 239 479 5.92e-49 177
Msa0167070 MtrunA17_Chr3g0135721 37.943 282 164 3 153 434 196 466 1.20e-48 177
Msa0167070 MtrunA17_Chr2g0331161 39.683 252 148 2 190 438 417 667 3.58e-48 177
Msa0167070 MtrunA17_Chr7g0255641 40.161 249 146 2 186 432 656 903 2.19e-47 174
Msa0167070 MtrunA17_Chr7g0255641 34.579 214 124 5 227 429 432 640 9.79e-29 119
Msa0167070 MtrunA17_Chr2g0316851 38.298 235 134 4 187 414 593 823 6.48e-47 174
Msa0167070 MtrunA17_Chr6g0456351 40.486 247 141 3 190 434 319 561 3.54e-46 168
Msa0167070 MtrunA17_Chr7g0255721 41.036 251 145 2 184 432 681 930 3.96e-46 171
Msa0167070 MtrunA17_Chr7g0255721 32.636 239 152 4 187 421 385 618 1.83e-30 125
Msa0167070 MtrunA17_Chr4g0033451 39.754 244 138 3 189 426 381 621 4.30e-46 171
Msa0167070 MtrunA17_Chr1g0158881 37.600 250 147 3 187 434 328 570 8.99e-46 169
Msa0167070 MtrunA17_Chr3g0135761 36.140 285 171 3 150 434 191 464 4.50e-45 166
Msa0167070 MtrunA17_Chr5g0432631 39.184 245 145 2 190 434 231 471 1.27e-43 163
Msa0167070 MtrunA17_Chr7g0255901 39.062 256 143 8 178 424 629 880 1.43e-43 163
Msa0167070 MtrunA17_Chr4g0004121 36.538 260 151 5 182 432 236 490 2.67e-42 156
Msa0167070 MtrunA17_Chr2g0277831 38.938 226 136 2 190 414 245 469 7.29e-42 158
Msa0167070 MtrunA17_Chr2g0277831 38.627 233 138 3 186 416 531 760 3.76e-40 153
Msa0167070 MtrunA17_Chr5g0397121 36.327 245 148 4 189 430 514 753 1.46e-41 157
Msa0167070 MtrunA17_Chr1g0195731 38.528 231 133 5 189 415 935 1160 7.42e-41 155
Msa0167070 MtrunA17_Chr1g0204031 38.261 230 134 5 189 415 558 782 2.42e-40 154
Msa0167070 MtrunA17_Chr7g0246111 36.214 243 146 5 176 415 200 436 5.57e-40 150
Msa0167070 MtrunA17_Chr4g0038101 37.391 230 135 5 190 415 723 947 5.94e-40 153
Msa0167070 MtrunA17_Chr8g0387641 35.217 230 141 4 189 415 522 746 1.55e-39 151
Msa0167070 MtrunA17_Chr4g0026631 35.055 271 146 10 182 446 121 367 1.72e-39 147
Msa0167070 MtrunA17_Chr1g0202371 37.391 230 135 5 189 415 398 621 1.80e-39 150
Msa0167070 MtrunA17_Chr3g0129971 38.723 235 133 5 189 415 297 528 1.91e-39 151
Msa0167070 MtrunA17_Chr1g0195741 37.229 231 136 5 189 415 939 1164 2.74e-39 151
Msa0167070 MtrunA17_Chr2g0321241 33.955 268 153 9 182 446 126 372 6.06e-39 145
Msa0167070 MtrunA17_Chr4g0052271 36.596 235 142 5 182 414 113 342 1.74e-38 144
Msa0167070 MtrunA17_Chr3g0116131 36.889 225 133 5 189 409 903 1122 3.42e-38 148
Msa0167070 MtrunA17_Chr1g0202381 36.522 230 138 5 189 415 469 693 2.51e-37 145
Msa0167070 MtrunA17_Chr6g0462581 36.522 230 137 5 189 415 501 724 2.62e-37 145
Msa0167070 MtrunA17_Chr2g0327231 41.566 166 97 0 183 348 341 506 9.98e-37 140
Msa0167070 MtrunA17_Chr2g0327231 47.727 88 42 1 190 277 155 238 5.96e-19 89.4
Msa0167070 MtrunA17_Chr4g0043381 34.513 226 145 1 190 415 839 1061 1.21e-36 143
Msa0167070 MtrunA17_Chr3g0127401 36.522 230 136 5 190 415 83 306 2.69e-36 137
Msa0167070 MtrunA17_Chr6g0459561 37.398 246 140 8 177 416 371 608 9.19e-36 140
Msa0167070 MtrunA17_Chr3g0086401 38.306 248 126 5 190 415 387 629 1.32e-34 136
Msa0167070 MtrunA17_Chr3g0086401 34.468 235 135 7 200 424 106 331 4.47e-29 120
Msa0167070 MtrunA17_Chr4g0047411 33.922 283 158 7 178 433 166 446 1.71e-34 136
Msa0167070 MtrunA17_Chr3g0086411 35.102 245 138 3 190 416 217 458 1.98e-34 134
Msa0167070 MtrunA17_Chr3g0086411 34.706 170 102 3 276 436 7 176 4.02e-18 86.7
Msa0167070 MtrunA17_Chr5g0432641 34.191 272 171 4 167 434 166 433 5.31e-34 134
Msa0167070 MtrunA17_Chr3g0127431 36.364 231 135 6 190 415 86 309 1.24e-33 130
Msa0167070 MtrunA17_Chr1g0168321 31.597 288 140 6 156 433 134 374 1.67e-33 132
Msa0167070 MtrunA17_Chr8g0357301 32.245 245 152 3 196 431 477 716 3.77e-32 130
Msa0167070 MtrunA17_Chr4g0062081 70.886 79 22 1 191 268 10 88 1.26e-31 116
Msa0167070 MtrunA17_Chr3g0135781 41.615 161 90 2 190 350 57 213 2.25e-31 119
Msa0167070 MtrunA17_Chr6g0459541 33.588 262 137 10 184 415 38 292 4.55e-31 122
Msa0167070 MtrunA17_Chr2g0289231 35.931 231 127 7 189 408 298 518 1.08e-30 124
Msa0167070 MtrunA17_Chr6g0459551 34.632 231 130 7 177 401 91 306 2.26e-26 110
Msa0167070 MtrunA17_Chr5g0432391 37.278 169 97 2 266 431 81 243 4.53e-24 103
Msa0167070 MtrunA17_Chr1g0190401 31.527 203 134 3 173 371 659 860 8.67e-23 102
Msa0167070 MtrunA17_Chr6g0459531 27.362 307 156 13 133 415 2 265 7.62e-17 81.3
Msa0167070 MtrunA17_Chr8g0372701 34.682 173 99 6 192 358 225 389 5.27e-14 73.9
Msa0167070 MtrunA17_Chr5g0404651 34.161 161 93 5 203 358 229 381 1.15e-13 72.8
Msa0167070 MtrunA17_Chr5g0404291 34.965 143 79 5 224 362 387 519 1.58e-13 72.8
Msa0167070 MtrunA17_Chr2g0315971 30.435 184 111 7 195 370 477 651 3.98e-12 68.6
Msa0167070 MtrunA17_Chr2g0292561 32.335 167 84 7 215 360 226 384 9.48e-12 66.6
Msa0167070 MtrunA17_Chr6g0466811 33.333 156 84 6 215 358 236 383 1.23e-11 66.6
Msa0167070 MtrunA17_Chr6g0452361 31.169 154 91 5 212 358 18 163 2.59e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0167070 AT4G29040.1 94.843 446 20 1 1 446 1 443 0.0 853
Msa0167070 AT2G20140.1 94.395 446 22 1 1 446 1 443 0.0 847
Msa0167070 AT5G58290.1 51.934 362 170 2 67 427 33 391 1.64e-133 390
Msa0167070 AT5G20000.1 51.692 325 156 1 115 438 85 409 4.48e-112 336
Msa0167070 AT5G19990.2 51.385 325 157 1 115 438 27 351 6.22e-112 334
Msa0167070 AT5G19990.1 51.385 325 157 1 115 438 85 409 6.76e-112 336
Msa0167070 AT5G19990.3 51.385 325 157 1 115 438 85 409 6.76e-112 336
Msa0167070 AT1G09100.1 45.789 380 185 2 79 437 37 416 2.39e-111 335
Msa0167070 AT3G05530.1 46.281 363 174 1 96 437 55 417 2.61e-111 335
Msa0167070 AT1G45000.1 46.631 371 191 3 74 437 15 385 2.93e-106 321
Msa0167070 AT5G43010.1 48.256 344 174 2 98 437 42 385 1.89e-105 318
Msa0167070 AT1G53750.1 46.334 341 175 3 112 446 85 423 3.24e-104 317
Msa0167070 AT1G53780.1 46.199 342 174 4 112 446 257 595 4.40e-98 306
Msa0167070 AT1G53780.4 46.199 342 174 4 112 446 257 595 4.40e-98 306
Msa0167070 AT1G53780.3 46.199 342 174 4 112 446 256 594 5.09e-98 306
Msa0167070 AT1G53780.2 46.199 342 174 4 112 446 278 616 7.98e-98 306
Msa0167070 AT1G45000.2 45.247 263 137 3 74 329 15 277 1.83e-67 219
Msa0167070 AT3G53230.1 47.137 227 117 1 190 416 207 430 1.73e-60 211
Msa0167070 AT3G53230.1 40.323 248 148 0 182 429 472 719 1.72e-54 194
Msa0167070 AT3G09840.1 47.137 227 117 2 190 416 206 429 9.75e-60 209
Msa0167070 AT3G09840.1 41.702 235 136 1 182 415 471 705 1.58e-51 186
Msa0167070 AT5G03340.1 47.137 227 117 2 190 416 206 429 1.02e-59 209
Msa0167070 AT5G03340.1 41.453 234 137 0 182 415 471 704 2.90e-53 191
Msa0167070 AT2G30950.4 41.633 245 142 1 189 433 229 472 2.46e-57 201
Msa0167070 AT2G30950.1 41.633 245 142 1 189 433 225 468 2.83e-57 201
Msa0167070 AT2G30950.2 41.633 245 142 1 189 433 225 468 2.83e-57 201
Msa0167070 AT2G30950.3 41.633 245 142 1 189 433 225 468 2.83e-57 201
Msa0167070 AT5G15250.1 43.673 245 137 1 189 433 222 465 1.64e-55 196
Msa0167070 AT1G06430.1 40.408 245 145 1 189 433 218 461 1.80e-55 196
Msa0167070 AT1G06430.3 40.408 245 145 1 189 433 218 461 1.80e-55 196
Msa0167070 AT1G06430.2 40.408 245 145 1 189 433 218 461 1.80e-55 196
Msa0167070 AT1G07510.1 43.725 247 135 3 190 433 326 571 3.75e-55 196
Msa0167070 AT3G47060.1 43.952 248 131 4 189 431 323 567 7.72e-54 192
Msa0167070 AT5G58870.1 43.952 248 131 4 189 431 327 571 9.73e-54 192
Msa0167070 AT1G50250.1 40.000 245 146 1 189 433 260 503 1.38e-52 188
Msa0167070 AT5G15250.2 39.925 268 137 2 189 433 222 488 4.07e-52 183
Msa0167070 AT2G29080.1 43.496 246 136 2 190 433 321 565 9.65e-52 187
Msa0167070 AT4G23940.1 39.044 251 144 2 190 432 429 678 7.23e-51 185
Msa0167070 AT5G42270.1 38.776 245 149 1 189 433 248 491 1.06e-50 182
Msa0167070 AT3G15120.2 39.485 233 132 3 187 413 725 954 4.91e-49 180
Msa0167070 AT3G15120.1 39.485 233 132 3 187 413 715 944 5.24e-49 180
Msa0167070 AT2G03670.1 38.400 250 151 2 186 432 281 530 1.62e-48 175
Msa0167070 AT2G03670.1 32.661 248 160 3 191 432 22 268 1.33e-35 139
Msa0167070 AT1G05910.1 40.323 248 139 3 189 430 379 623 1.89e-48 178
Msa0167070 AT2G26140.1 40.408 245 142 2 190 434 226 466 6.44e-48 175
Msa0167070 AT3G56690.1 40.000 230 137 1 186 415 719 947 2.53e-47 175
Msa0167070 AT3G56690.1 42.347 196 109 2 220 414 413 605 1.13e-42 161
Msa0167070 AT3G16290.1 39.749 239 143 1 190 428 409 646 4.57e-47 174
Msa0167070 AT5G53170.1 37.200 250 148 3 187 434 358 600 1.48e-45 169
Msa0167070 AT3G02450.1 39.850 266 152 4 183 444 326 587 1.59e-44 164
Msa0167070 AT2G45500.4 35.341 249 150 6 171 415 63 304 1.82e-43 156
Msa0167070 AT2G45500.3 35.341 249 150 6 171 415 63 304 1.82e-43 156
Msa0167070 AT2G45500.2 34.783 253 154 6 167 415 192 437 2.54e-42 156
Msa0167070 AT2G45500.1 35.341 249 150 6 171 415 200 441 2.90e-42 156
Msa0167070 AT1G03000.1 37.743 257 153 6 178 430 645 898 3.55e-42 160
Msa0167070 AT2G45500.5 34.783 253 154 6 167 415 202 447 4.50e-42 155
Msa0167070 AT1G80350.1 35.769 260 153 5 182 432 230 484 2.03e-41 154
Msa0167070 AT1G02890.1 38.095 231 134 5 189 415 942 1167 4.71e-41 157
Msa0167070 AT4G02480.1 38.095 231 134 5 189 415 961 1186 7.10e-41 156
Msa0167070 AT4G28000.3 37.826 230 134 6 189 415 518 741 1.51e-40 155
Msa0167070 AT4G28000.2 37.826 230 134 6 189 415 518 741 1.63e-40 155
Msa0167070 AT4G28000.1 37.826 230 134 6 189 415 516 739 1.68e-40 154
Msa0167070 AT5G53540.1 37.826 230 133 5 190 415 86 309 2.99e-40 149
Msa0167070 AT5G08470.1 36.726 226 140 1 190 415 843 1065 9.17e-40 153
Msa0167070 AT5G08470.3 36.726 226 140 1 190 415 834 1056 9.75e-40 153
Msa0167070 AT2G34560.1 36.283 226 140 3 190 414 102 324 4.85e-39 145
Msa0167070 AT2G34560.2 36.283 226 140 3 190 414 111 333 5.55e-39 145
Msa0167070 AT1G64110.5 35.652 230 140 5 189 415 517 741 1.41e-38 149
Msa0167070 AT1G64110.3 35.652 230 140 5 189 415 517 741 1.41e-38 149
Msa0167070 AT1G64110.2 35.652 230 140 5 189 415 519 743 1.49e-38 149
Msa0167070 AT1G64110.4 35.652 230 140 5 189 415 519 743 1.49e-38 149
Msa0167070 AT1G64110.1 35.652 230 140 5 189 415 514 738 1.76e-38 149
Msa0167070 AT5G52882.1 36.957 230 136 6 189 415 515 738 3.22e-38 148
Msa0167070 AT5G64580.1 37.447 235 136 6 189 415 314 545 6.64e-38 147
Msa0167070 AT3G01610.1 34.959 246 145 3 180 414 222 463 8.52e-38 147
Msa0167070 AT3G01610.1 36.123 227 140 3 190 415 527 749 1.78e-33 134
Msa0167070 AT3G01610.2 34.959 246 145 3 180 414 222 463 8.53e-38 147
Msa0167070 AT3G01610.2 36.123 227 140 3 190 415 527 749 1.74e-33 134
Msa0167070 AT4G27680.1 37.229 231 133 6 190 415 83 306 1.11e-37 142
Msa0167070 AT1G50140.3 37.500 232 132 6 190 415 713 937 1.63e-37 146
Msa0167070 AT1G50140.1 37.500 232 132 6 190 415 713 937 1.63e-37 146
Msa0167070 AT1G50140.4 37.500 232 132 6 190 415 713 937 1.63e-37 146
Msa0167070 AT1G50140.2 37.500 232 132 6 190 415 691 915 1.65e-37 146
Msa0167070 AT1G50140.5 37.500 232 132 6 190 415 691 915 1.65e-37 146
Msa0167070 AT2G03670.2 32.661 248 160 3 191 432 22 268 1.07e-36 140
Msa0167070 AT2G03670.2 38.028 142 87 1 186 326 281 422 3.52e-22 99.0
Msa0167070 AT2G27600.1 34.686 271 147 11 182 446 123 369 1.16e-36 140
Msa0167070 AT3G19740.1 36.087 230 138 5 190 415 703 927 6.58e-36 141
Msa0167070 AT4G24860.4 35.065 231 141 5 189 415 791 1016 8.65e-36 141
Msa0167070 AT4G24860.1 35.065 231 141 5 189 415 818 1043 8.92e-36 141
Msa0167070 AT4G24860.3 35.065 231 141 5 189 415 816 1041 9.08e-36 141
Msa0167070 AT4G24860.2 35.065 231 141 5 189 415 814 1039 1.19e-35 140
Msa0167070 AT3G27120.1 36.327 245 142 8 177 415 389 625 2.46e-35 139
Msa0167070 AT1G79560.2 32.653 245 151 3 196 431 497 736 2.44e-32 130
Msa0167070 AT1G79560.3 32.653 245 151 3 196 431 497 736 2.56e-32 130
Msa0167070 AT1G79560.1 32.653 245 151 3 196 431 497 736 2.85e-32 130
Msa0167070 AT4G04910.1 33.453 278 156 8 178 428 203 478 5.54e-32 129
Msa0167070 AT4G04180.1 35.808 229 130 6 189 408 317 537 9.00e-32 128
Msa0167070 AT4G04180.2 35.808 229 130 6 189 408 312 532 9.43e-32 128
Msa0167070 AT1G62130.2 32.143 224 133 6 189 409 744 951 5.73e-28 117
Msa0167070 AT1G62130.1 32.143 224 133 6 189 409 751 958 5.96e-28 117
Msa0167070 AT1G02890.2 33.766 231 116 6 189 415 942 1139 2.64e-26 112
Msa0167070 AT3G04340.1 33.511 188 120 3 186 372 782 965 5.02e-23 103
Msa0167070 AT5G08470.2 35.135 148 93 1 190 337 843 987 6.49e-20 93.2
Msa0167070 AT2G18193.1 34.568 162 93 6 201 357 219 372 1.07e-12 70.1
Msa0167070 AT2G18330.1 31.844 179 104 7 186 362 354 516 9.56e-12 67.4
Msa0167070 AT4G36580.1 30.481 187 100 7 184 362 349 513 1.06e-11 67.4

Find 137 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCGCTTCCGTCTTGTTTC+CGG 0.186760 1_4:-48794154 None:intergenic
AGCAAGGTCTTTCCTGTTCC+AGG 0.251915 1_4:-48796149 None:intergenic
AAAAGTTCCCTCACAAGTTT+TGG 0.253191 1_4:-48796893 None:intergenic
TAGAGAGACCTCAATCAAAA+TGG 0.277129 1_4:-48798782 None:intergenic
CTTTCAAATTTCACCGACTT+TGG 0.284176 1_4:+48798744 Msa0167070:three_prime_UTR
CCATATAATATGACCCCTTT+AGG 0.285127 1_4:-48796122 None:intergenic
CCTAAAGGGGTCATATTATA+TGG 0.302302 1_4:+48796122 Msa0167070:CDS
TGGTTTAGATGCGCAGATTC+AGG 0.304376 1_4:+48796031 Msa0167070:CDS
TGACCCATCGTCGATCGATT+TGG 0.312875 1_4:-48794089 None:intergenic
GGTGAAGGATTATTTGTTGA+TGG 0.316417 1_4:+48794322 Msa0167070:CDS
AGGAGATGTAAAAGTGATTC+TGG 0.336312 1_4:+48797202 Msa0167070:CDS
AAGCTGGCTTACTTGCTCTA+AGG 0.338560 1_4:+48797558 Msa0167070:CDS
GCCGATGAGTGTTGGGAATC+TGG 0.341792 1_4:+48794436 Msa0167070:CDS
TCCGTCTTGTTTCCGGTCAC+CGG 0.353994 1_4:-48794147 None:intergenic
ATTTCATCCACAACTGCATA+TGG 0.355370 1_4:-48798682 None:intergenic
CTTCACATATATAGTCCTTC+TGG 0.358495 1_4:-48798554 None:intergenic
CCTGAACTATATGAAGATAT+TGG 0.363458 1_4:+48796089 Msa0167070:CDS
GAAAGTCGAGAAGGCTCCTT+TGG 0.379073 1_4:+48795989 Msa0167070:CDS
TTGAATCAAAACCATCTAAC+TGG 0.394542 1_4:-48797178 None:intergenic
ATTCTCTGGAGCTGATATAA+AGG 0.399716 1_4:+48797523 Msa0167070:CDS
TCCTTTGCCTTCTTAAAGTC+GGG 0.401797 1_4:-48798500 None:intergenic
CCAATATCTTCATATAGTTC+AGG 0.405223 1_4:-48796089 None:intergenic
TCATGCTATTGTTTCGAGTT+CGG 0.405752 1_4:+48794478 Msa0167070:CDS
GGTAACCGTGAAGCGGCATC+TGG 0.405940 1_4:-48794248 None:intergenic
GGCGGAGGAAGATAGATCTA+AGG 0.407560 1_4:+48794394 Msa0167070:CDS
TATCAGGTTCTATCGGTTGT+TGG 0.410524 1_4:+48795927 Msa0167070:intron
AAGAAGGTCGGGGATAATAA+AGG 0.421527 1_4:-48798583 None:intergenic
CATATAGTTCAGGATGTGTA+AGG 0.423583 1_4:-48796079 None:intergenic
GGTCACCGGGATGGCCTTGT+CGG 0.424135 1_4:-48794133 None:intergenic
GCTATTGTTTCGAGTTCGGT+TGG 0.424882 1_4:+48794482 Msa0167070:CDS
TGTTTCGAGTTCGGTTGGGC+CGG 0.432915 1_4:+48794487 Msa0167070:CDS
CCGTCTTGTTTCCGGTCACC+GGG 0.433843 1_4:-48794146 None:intergenic
ATCCTTTGCCTTCTTAAAGT+CGG 0.438674 1_4:-48798501 None:intergenic
CTCAGCTTGCACTTCGATAC+CGG 0.441459 1_4:-48794281 None:intergenic
TAAAGTGTTTGGCACGTTCA+AGG 0.441738 1_4:-48794045 None:intergenic
GCTACATTCTTGCGTGTAGT+AGG 0.441990 1_4:+48796836 Msa0167070:CDS
TCGTAAACAACGCAAACAAA+AGG 0.444206 1_4:+48794223 Msa0167070:CDS
GTGGCTCGCCGATGAGTGTT+GGG 0.452232 1_4:+48794429 Msa0167070:CDS
ACACGCGCCGGTGGTGCTGC+TGG 0.453673 1_4:-48794197 None:intergenic
GTTGGGCCGGAGTATTATGT+TGG 0.456605 1_4:+48794500 Msa0167070:CDS
GAGTTGCTGAACCAGTTAGA+TGG 0.457903 1_4:+48797167 Msa0167070:CDS
CGACCAGGTCGTAGCAAAGC+TGG 0.459189 1_4:-48797251 None:intergenic
TCAAGAGAGGTTGAAGCCTC+AGG 0.464256 1_4:+48794364 Msa0167070:CDS
AACAAAGAAGAGTGAACAAA+AGG 0.465923 1_4:+48794014 Msa0167070:five_prime_UTR
ATGACGAAGGATGAATTCTC+TGG 0.469733 1_4:+48797509 Msa0167070:CDS
GTGATGTTTAAGAAGAAAGA+AGG 0.471189 1_4:+48798527 Msa0167070:CDS
CCTTGTCGGTTCATGCCGCC+AGG 0.474081 1_4:-48794119 None:intergenic
CTATTGTTTCGAGTTCGGTT+GGG 0.476955 1_4:+48794483 Msa0167070:CDS
CGTGGCTCGCCGATGAGTGT+TGG 0.479586 1_4:+48794428 Msa0167070:CDS
AGTTCAAACCTTTGCAAGCA+AGG 0.479869 1_4:-48796165 None:intergenic
TTGGGCCGGAGTATTATGTT+GGG 0.486241 1_4:+48794501 Msa0167070:CDS
TTGGCATCAAGCCACCTAAA+GGG 0.486742 1_4:+48796108 Msa0167070:CDS
ATCAAGACTTTCAATTCTGT+TGG 0.488586 1_4:-48797228 None:intergenic
TACGACCTGGTCGTATTGAT+AGG 0.488820 1_4:+48797261 Msa0167070:CDS
TTATATGGAGAACCTGGAAC+AGG 0.489995 1_4:+48796137 Msa0167070:CDS
TGAATTGATACAAAAGTACT+TGG 0.490609 1_4:+48796862 Msa0167070:CDS
AGAGAGACCTCAATCAAAAT+GGG 0.498162 1_4:-48798781 None:intergenic
AGATGAAAGTGTAAAGTGTT+TGG 0.498627 1_4:-48794056 None:intergenic
GACAAGGCCATCCCGGTGAC+CGG 0.499250 1_4:+48794135 Msa0167070:CDS
TAATTAAGATACACACATCA+AGG 0.499810 1_4:+48797447 Msa0167070:intron
GAATCTTATGCTGACATTGG+TGG 0.503180 1_4:+48796011 Msa0167070:CDS
GTTGAAGCCTCAGGAGGAGA+AGG 0.505715 1_4:+48794373 Msa0167070:CDS
AAGGCAATATGTACTGAAGC+TGG 0.512575 1_4:+48797542 Msa0167070:CDS
ACTTTCATGACTGAGACCAT+TGG 0.513179 1_4:-48795972 None:intergenic
ATTCGAACCAGCAGCACCAC+CGG 0.515131 1_4:+48794190 Msa0167070:CDS
TTGGAATCTTATGCTGACAT+TGG 0.515821 1_4:+48796008 Msa0167070:CDS
GAAATTTGAAAGCAAATATG+TGG 0.528960 1_4:-48798733 None:intergenic
AATCGATCGACGATGGGTCA+AGG 0.531008 1_4:+48794092 Msa0167070:exon
ATTTCCAAATCGATCGACGA+TGG 0.533966 1_4:+48794085 Msa0167070:exon
CTTGTTTCCGGTCACCGGGA+TGG 0.534444 1_4:-48794142 None:intergenic
AAAGTGTTTGGCACGTTCAA+GGG 0.538764 1_4:-48794044 None:intergenic
TCATCAATGAAAACAATAGC+AGG 0.540016 1_4:-48796938 None:intergenic
ATTGGCATCAAGCCACCTAA+AGG 0.541004 1_4:+48796107 Msa0167070:CDS
GAAGGATTATTTGTTGATGG+AGG 0.541197 1_4:+48794325 Msa0167070:CDS
CGTAAACAACGCAAACAAAA+GGG 0.541325 1_4:+48794224 Msa0167070:CDS
TCTAAGGGAACGCCGAATGA+AGG 0.547948 1_4:+48797574 Msa0167070:CDS
GATCAACTTCGTCTTGCAGA+AGG 0.548110 1_4:-48795950 None:intergenic
TTTCCAAATCGATCGACGAT+GGG 0.552350 1_4:+48794086 Msa0167070:exon
ATGAACCGACAAGGCCATCC+CGG 0.552573 1_4:+48794128 Msa0167070:CDS
AGGAAAGACCTTGCTTGCAA+AGG 0.553721 1_4:+48796157 Msa0167070:CDS
GACTCATCCCGACTTTAAGA+AGG 0.557748 1_4:+48798493 Msa0167070:CDS
GCCTCAGGAGGAGAAGGCGG+AGG 0.564123 1_4:+48794379 Msa0167070:CDS
TGAGGCTGTTAAAGCTTGAG+AGG 0.566340 1_4:+48794300 Msa0167070:CDS
TATGAAACAATTTCCAAAGT+CGG 0.566779 1_4:-48798757 None:intergenic
AGGGTCCAGATGCCGCTTCA+CGG 0.568148 1_4:+48794243 Msa0167070:CDS
TCCAGATTCCCAACACTCAT+CGG 0.570778 1_4:-48794437 None:intergenic
GATCCAGCTTTGCTACGACC+TGG 0.573418 1_4:+48797248 Msa0167070:CDS
GTCATATTATATGGAGAACC+TGG 0.573959 1_4:+48796131 Msa0167070:CDS
TATAATATGACCCCTTTAGG+TGG 0.577793 1_4:-48796119 None:intergenic
GCAAGACGAAGTTGATCCAA+TGG 0.579653 1_4:+48795956 Msa0167070:CDS
TACAGGTATGATGCTCACTC+AGG 0.582791 1_4:+48797113 Msa0167070:intron
GGAAGAATTTGTTATGACGA+AGG 0.583336 1_4:+48797496 Msa0167070:CDS
ACGATGGGTCAAGGAACTCC+TGG 0.583601 1_4:+48794101 Msa0167070:exon
ACTTTATCCATATGCAGTTG+TGG 0.583879 1_4:+48798675 Msa0167070:three_prime_UTR
ATTAGCTGATGATGTCAACT+TGG 0.586051 1_4:+48797475 Msa0167070:CDS
TCCTCCGCCTTCTCCTCCTG+AGG 0.587094 1_4:-48794380 None:intergenic
GTGGAGAACGTGAAATTCAA+AGG 0.587888 1_4:+48797135 Msa0167070:CDS
GATAAGGATCAATTGGAGCC+TGG 0.591343 1_4:+48794539 Msa0167070:CDS
ACGGTTACCGACGGTGACTC+CGG 0.591399 1_4:+48794262 Msa0167070:CDS
AGCTGGCTTACTTGCTCTAA+GGG 0.591923 1_4:+48797559 Msa0167070:CDS
ATATAGTTCAGGATGTGTAA+GGG 0.593502 1_4:-48796078 None:intergenic
ATACAAAAGTACTTGGGAGA+TGG 0.593824 1_4:+48796869 Msa0167070:CDS
TCCCGACTTTAAGAAGGCAA+AGG 0.594284 1_4:+48798499 Msa0167070:CDS
AGGTATGATGCTCACTCAGG+TGG 0.601443 1_4:+48797116 Msa0167070:intron
AAAATCCCAACATAATACTC+CGG 0.602001 1_4:-48794506 None:intergenic
TGGCATCAAGCCACCTAAAG+GGG 0.607820 1_4:+48796109 Msa0167070:CDS
ATTGATGAAATTGATGCGGT+CGG 0.608145 1_4:+48796953 Msa0167070:CDS
AAGAAAGAAGGAGTGCCAGA+AGG 0.608420 1_4:+48798539 Msa0167070:CDS
GCAGATTCAGGAAATTAAAG+AGG 0.609731 1_4:+48796043 Msa0167070:CDS
GTTAAAGCTTGAGAGGGTGA+AGG 0.609846 1_4:+48794307 Msa0167070:CDS
AGATGGTCCAAAACTTGTGA+GGG 0.610145 1_4:+48796886 Msa0167070:CDS
CACCGTCGGTAACCGTGAAG+CGG 0.611205 1_4:-48794255 None:intergenic
TATAGTTCAGGATGTGTAAG+GGG 0.615490 1_4:-48796077 None:intergenic
AGTTTGTTGCGTATCAAGAG+AGG 0.615599 1_4:+48794351 Msa0167070:CDS
CTCAGTCATGAAAGTCGAGA+AGG 0.618736 1_4:+48795980 Msa0167070:CDS
GCAGCACCACCGGCGCGTGT+AGG 0.619998 1_4:+48794200 Msa0167070:CDS
GAAGCCTCAGGAGGAGAAGG+CGG 0.620796 1_4:+48794376 Msa0167070:CDS
CCCGGTGACCGGAAACAAGA+CGG 0.624045 1_4:+48794146 Msa0167070:CDS
TGCCGCTTCACGGTTACCGA+CGG 0.640465 1_4:+48794253 Msa0167070:CDS
TGCATCAAAATAGCACAACC+AGG 0.642077 1_4:-48794557 None:intergenic
ATCTTCCTATCAATACGACC+AGG 0.647291 1_4:-48797266 None:intergenic
CCTGGCGGCATGAACCGACA+AGG 0.647568 1_4:+48794119 Msa0167070:CDS
TTACGACCTACACGCGCCGG+TGG 0.648178 1_4:-48794206 None:intergenic
GAGATGGTCCAAAACTTGTG+AGG 0.650908 1_4:+48796885 Msa0167070:CDS
CGGTATCGAAGTGCAAGCTG+AGG 0.651265 1_4:+48794282 Msa0167070:CDS
TGTTTACGACCTACACGCGC+CGG 0.657461 1_4:-48794209 None:intergenic
TTCGATACCGGAGTCACCGT+CGG 0.658712 1_4:-48794269 None:intergenic
AGAGAGGTTGAAGCCTCAGG+AGG 0.663698 1_4:+48794367 Msa0167070:CDS
TTTCATTGATGAAATTGATG+CGG 0.663748 1_4:+48796949 Msa0167070:CDS
AATAGCAGGAGAAAGATCAT+CGG 0.664706 1_4:-48796924 None:intergenic
ATGTCAGCATAAGATTCCAA+AGG 0.668551 1_4:-48796005 None:intergenic
TTGATGCGGTCGGTACAAAG+AGG 0.668806 1_4:+48796963 Msa0167070:CDS
GAGGCTGTTAAAGCTTGAGA+GGG 0.670530 1_4:+48794301 Msa0167070:CDS
GAATTGATACAAAAGTACTT+GGG 0.673200 1_4:+48796863 Msa0167070:CDS
GATGAGTGTTGGGAATCTGG+AGG 0.708876 1_4:+48794439 Msa0167070:CDS
ATGGGTCAAGGAACTCCTGG+CGG 0.711012 1_4:+48794104 Msa0167070:CDS
TCTAAGGTTGATGATCTACG+TGG 0.778964 1_4:+48794410 Msa0167070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCAAAAAAAAGATTATAA+GGG + chr1_4:48794748-48794767 Msa0167070:intron 10.0%
!! TTTAATTAATAAATAAATCG+TGG + chr1_4:48798047-48798066 Msa0167070:intron 10.0%
!!! TGTTGTTTTTATAATTTTGT+TGG + chr1_4:48794657-48794676 Msa0167070:intron 15.0%
!!! TTTTATAATTTTGTTGGAAT+TGG + chr1_4:48794663-48794682 Msa0167070:intron 15.0%
!!! TCATTATGATTTTGATTATA+AGG + chr1_4:48794715-48794734 Msa0167070:intron 15.0%
!!! CATTATGATTTTGATTATAA+GGG + chr1_4:48794716-48794735 Msa0167070:intron 15.0%
!! CTTTCAAAAAAAAGATTATA+AGG + chr1_4:48794747-48794766 Msa0167070:intron 15.0%
!!! CTTATTTTCATAAATTCTTT+AGG + chr1_4:48794877-48794896 Msa0167070:intron 15.0%
!! GAAATATTCTTTATAGAATT+AGG + chr1_4:48795843-48795862 Msa0167070:intron 15.0%
!!! ATTATGATTGATTTTTTATC+AGG + chr1_4:48795911-48795930 Msa0167070:intron 15.0%
!!! AACATGATTTTTTTCATTTT+TGG + chr1_4:48796410-48796429 Msa0167070:intron 15.0%
!!! ATAAATTTTTAACCTTCATT+CGG - chr1_4:48797589-48797608 None:intergenic 15.0%
!! ATTTATATACAGCATTTATT+GGG + chr1_4:48797752-48797771 Msa0167070:intron 15.0%
!!! TTGTTTCATCTTTTAATATT+AGG + chr1_4:48797967-48797986 Msa0167070:intron 15.0%
!!! TGTTTCATCTTTTAATATTA+GGG + chr1_4:48797968-48797987 Msa0167070:intron 15.0%
!! TAAAAAAACATAAGATTGAT+AGG - chr1_4:48798374-48798393 None:intergenic 15.0%
!!! TCAATCTTATGTTTTTTTAA+AGG + chr1_4:48798375-48798394 Msa0167070:intron 15.0%
!! AATAGTAAGATATCATAAAT+TGG - chr1_4:48798452-48798471 None:intergenic 15.0%
!!! GATTTTATCTTTTGTTGATA+AGG + chr1_4:48794523-48794542 Msa0167070:CDS 20.0%
!! AAATTTGAATTGTTGATCTA+GGG + chr1_4:48794617-48794636 Msa0167070:intron 20.0%
!!! TATAAACATTTAAGCTGTTT+TGG - chr1_4:48794910-48794929 None:intergenic 20.0%
!!! TTCACTCTCATTTTATAAAT+GGG - chr1_4:48795124-48795143 None:intergenic 20.0%
!!! ATTCACTCTCATTTTATAAA+TGG - chr1_4:48795125-48795144 None:intergenic 20.0%
!!! TTCACTCTAGTTTTATAAAA+GGG - chr1_4:48795197-48795216 None:intergenic 20.0%
!!! ATTCACTCTAGTTTTATAAA+AGG - chr1_4:48795198-48795217 None:intergenic 20.0%
!! ATTTGATACCATACTATAAT+TGG + chr1_4:48795766-48795785 Msa0167070:intron 20.0%
!!! ATGAAAATTAGGAAAAGTTT+TGG + chr1_4:48795818-48795837 Msa0167070:intron 20.0%
!! TATATGAATCCTAAAATTGT+GGG - chr1_4:48797001-48797020 None:intergenic 20.0%
!! CATTTATATACAGCATTTAT+TGG + chr1_4:48797751-48797770 Msa0167070:intron 20.0%
!!! CTTTTAGTATTAAGACAATA+AGG - chr1_4:48797848-48797867 None:intergenic 20.0%
!!! ATAGTTAGAAAAAGTTTTGT+GGG - chr1_4:48798277-48798296 None:intergenic 20.0%
!!! TATAGTTAGAAAAAGTTTTG+TGG - chr1_4:48798278-48798297 None:intergenic 20.0%
!!! TAACTATAGTTACATTTTGT+AGG + chr1_4:48798290-48798309 Msa0167070:intron 20.0%
!! AGATCAAATAAAAAGAAAGA+AGG - chr1_4:48798602-48798621 None:intergenic 20.0%
!!! TTTTGTTGATAAGGATCAAT+TGG + chr1_4:48794532-48794551 Msa0167070:CDS 25.0%
!!! TGCTATTTTGATGCATAATA+AGG + chr1_4:48794565-48794584 Msa0167070:CDS 25.0%
! GAAATTTGAATTGTTGATCT+AGG + chr1_4:48794616-48794635 Msa0167070:intron 25.0%
!! AAAGATTATAAGGGTTTGTT+TGG + chr1_4:48794757-48794776 Msa0167070:intron 25.0%
!! TGACTTATTTGAGTTTACTT+TGG + chr1_4:48794782-48794801 Msa0167070:intron 25.0%
!! GACTTATTTGAGTTTACTTT+GGG + chr1_4:48794783-48794802 Msa0167070:intron 25.0%
! ATAACATGTCTATAAGTTGT+TGG + chr1_4:48794853-48794872 Msa0167070:intron 25.0%
! ATAAGCACTTATATGATAAG+CGG + chr1_4:48794944-48794963 Msa0167070:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr1_4:48794986-48795005 Msa0167070:intron 25.0%
! TGTTTGATGTAACTAAAGTA+TGG + chr1_4:48795034-48795053 Msa0167070:intron 25.0%
! GTTTGATGTAACTAAAGTAT+GGG + chr1_4:48795035-48795054 Msa0167070:intron 25.0%
! TATAAAATGAGAGTGAATTG+AGG + chr1_4:48795127-48795146 Msa0167070:intron 25.0%
! TTATAGAATTAGCTATCTCT+AGG + chr1_4:48795366-48795385 Msa0167070:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr1_4:48794986-48795005 Msa0167070:intron 25.0%
! ATACCATACTATAATTGGTT+TGG + chr1_4:48795771-48795790 Msa0167070:intron 25.0%
!! TACCATACTATAATTGGTTT+GGG + chr1_4:48795772-48795791 Msa0167070:intron 25.0%
! CAAATTATACAGACAATAAC+AGG - chr1_4:48795874-48795893 None:intergenic 25.0%
!!! GATTTTTTATCAGGTTCTAT+CGG + chr1_4:48795920-48795939 Msa0167070:intron 25.0%
!!! TTGTTTACAATGTTACTTTC+TGG + chr1_4:48796329-48796348 Msa0167070:intron 25.0%
!! GATAAATACTGTATTGATAC+TGG + chr1_4:48796528-48796547 Msa0167070:intron 25.0%
!!! TGAATTGATACAAAAGTACT+TGG + chr1_4:48796862-48796881 Msa0167070:CDS 25.0%
!!! GAATTGATACAAAAGTACTT+GGG + chr1_4:48796863-48796882 Msa0167070:CDS 25.0%
! TTTCATTGATGAAATTGATG+CGG + chr1_4:48796949-48796968 Msa0167070:CDS 25.0%
! CTATATGAATCCTAAAATTG+TGG - chr1_4:48797002-48797021 None:intergenic 25.0%
!!! CACAATTTTAGGATTCATAT+AGG + chr1_4:48797000-48797019 Msa0167070:intron 25.0%
!!! AATTTTAGGATTCATATAGG+TGG + chr1_4:48797003-48797022 Msa0167070:intron 25.0%
!!! ATTTTAGGATTCATATAGGT+GGG + chr1_4:48797004-48797023 Msa0167070:intron 25.0%
! CAATTAAACTCATGAATGTA+AGG - chr1_4:48797082-48797101 None:intergenic 25.0%
! TAATTGTTAATATGCCTTAC+AGG + chr1_4:48797096-48797115 Msa0167070:intron 25.0%
! TAATTAAGATACACACATCA+AGG + chr1_4:48797447-48797466 Msa0167070:intron 25.0%
! ACCCAAATATATTATGCTAA+GGG + chr1_4:48797682-48797701 Msa0167070:intron 25.0%
! AAAAACTAAGTTGTAGTTGT+TGG - chr1_4:48797931-48797950 None:intergenic 25.0%
!! TTCATCTTTTAATATTAGGG+TGG + chr1_4:48797971-48797990 Msa0167070:intron 25.0%
! TGATTCACTGAAGTAAAAAT+TGG - chr1_4:48798338-48798357 None:intergenic 25.0%
! TAAGATTGATAGGTAAAGAT+GGG - chr1_4:48798364-48798383 None:intergenic 25.0%
! ATAAGATTGATAGGTAAAGA+TGG - chr1_4:48798365-48798384 None:intergenic 25.0%
!! GATTTGTCTGTATTATCTTT+TGG + chr1_4:48798397-48798416 Msa0167070:intron 25.0%
! AGTAAGATATCATAAATTGG+AGG - chr1_4:48798449-48798468 None:intergenic 25.0%
!!! ATTGCTTTTATATCTTGTTC+AGG + chr1_4:48798469-48798488 Msa0167070:intron 25.0%
! AAATAAAAAGAAAGAAGGTC+GGG - chr1_4:48798597-48798616 None:intergenic 25.0%
! CAAATAAAAAGAAAGAAGGT+CGG - chr1_4:48798598-48798617 None:intergenic 25.0%
!! GTTATACTTTTGCAAACAAA+TGG + chr1_4:48798627-48798646 Msa0167070:three_prime_UTR 25.0%
! GAAATTTGAAAGCAAATATG+TGG - chr1_4:48798736-48798755 None:intergenic 25.0%
! TATGAAACAATTTCCAAAGT+CGG - chr1_4:48798760-48798779 None:intergenic 25.0%
AACAAAGAAGAGTGAACAAA+AGG + chr1_4:48794014-48794033 Msa0167070:five_prime_UTR 30.0%
! AGATGAAAGTGTAAAGTGTT+TGG - chr1_4:48794059-48794078 None:intergenic 30.0%
AAAATCCCAACATAATACTC+CGG - chr1_4:48794509-48794528 None:intergenic 30.0%
GCTAATAAGCCAAAAAGATA+CGG - chr1_4:48795012-48795031 None:intergenic 30.0%
!!! CTCATTTTATAAATGGGTTG+AGG - chr1_4:48795118-48795137 None:intergenic 30.0%
TATAAAACTAGAGTGAATCG+AGG + chr1_4:48795200-48795219 Msa0167070:intron 30.0%
AAGCTCATTACTTCTTCAAA+AGG - chr1_4:48795745-48795764 None:intergenic 30.0%
TTGAACCTGGAATGAAAATT+AGG + chr1_4:48795807-48795826 Msa0167070:intron 30.0%
! CTTTTCCTAATTTTCATTCC+AGG - chr1_4:48795815-48795834 None:intergenic 30.0%
ATATAGTTCAGGATGTGTAA+GGG - chr1_4:48796081-48796100 None:intergenic 30.0%
CCAATATCTTCATATAGTTC+AGG - chr1_4:48796092-48796111 None:intergenic 30.0%
CCTGAACTATATGAAGATAT+TGG + chr1_4:48796089-48796108 Msa0167070:CDS 30.0%
TCAATAATGAATCAATGCTG+TGG + chr1_4:48796209-48796228 Msa0167070:intron 30.0%
ATTATCAGATCTGTAGAGTT+TGG + chr1_4:48796281-48796300 Msa0167070:intron 30.0%
AGATGAAAATCTCTGTGTTT+AGG + chr1_4:48796445-48796464 Msa0167070:intron 30.0%
GATGAAAATCTCTGTGTTTA+GGG + chr1_4:48796446-48796465 Msa0167070:intron 30.0%
ATGAAAATCTCTGTGTTTAG+GGG + chr1_4:48796447-48796466 Msa0167070:intron 30.0%
! GATTCCTTATGTACTGTTTT+GGG + chr1_4:48796475-48796494 Msa0167070:intron 30.0%
! ATTCCTTATGTACTGTTTTG+GGG + chr1_4:48796476-48796495 Msa0167070:intron 30.0%
TGCTTCTTACTAATACAACT+TGG - chr1_4:48796650-48796669 None:intergenic 30.0%
! TTAAAGAAGCAGCAGTTTTT+CGG - chr1_4:48796694-48796713 None:intergenic 30.0%
TCATCAATGAAAACAATAGC+AGG - chr1_4:48796941-48796960 None:intergenic 30.0%
!!! TTTTAGGATTCATATAGGTG+GGG + chr1_4:48797005-48797024 Msa0167070:intron 30.0%
TTGAATCAAAACCATCTAAC+TGG - chr1_4:48797181-48797200 None:intergenic 30.0%
!!! TTAGATGGTTTTGATTCAAG+AGG + chr1_4:48797182-48797201 Msa0167070:CDS 30.0%
ATCAAGACTTTCAATTCTGT+TGG - chr1_4:48797231-48797250 None:intergenic 30.0%
CAAAACTAATCATGTTTACC+TGG - chr1_4:48797334-48797353 None:intergenic 30.0%
GAATCAACAGAAACAACATT+AGG - chr1_4:48797362-48797381 None:intergenic 30.0%
! TGCATATTTAAGATACCACA+TGG - chr1_4:48797384-48797403 None:intergenic 30.0%
GTCAAAACTAGCAAGTTAAT+AGG - chr1_4:48797642-48797661 None:intergenic 30.0%
GACCCAAATATATTATGCTA+AGG + chr1_4:48797681-48797700 Msa0167070:intron 30.0%
GCCCTTAGCATAATATATTT+GGG - chr1_4:48797686-48797705 None:intergenic 30.0%
TATACAGCATTTATTGGGTT+AGG + chr1_4:48797757-48797776 Msa0167070:intron 30.0%
ATACAGCATTTATTGGGTTA+GGG + chr1_4:48797758-48797777 Msa0167070:intron 30.0%
AGCAACCTAAAAAATTTGCA+TGG + chr1_4:48797819-48797838 Msa0167070:intron 30.0%
!!! AGCATTTTTTATTCTGACAC+TGG - chr1_4:48798169-48798188 None:intergenic 30.0%
AAATGCTTGTTTGATTCTAC+TGG + chr1_4:48798182-48798201 Msa0167070:intron 30.0%
AATGCTTGTTTGATTCTACT+GGG + chr1_4:48798183-48798202 Msa0167070:intron 30.0%
GGTAACTTGAGTGTATATTT+AGG + chr1_4:48798311-48798330 Msa0167070:intron 30.0%
GTGATGTTTAAGAAGAAAGA+AGG + chr1_4:48798527-48798546 Msa0167070:CDS 30.0%
AATAAAAAGAAAGAAGGTCG+GGG - chr1_4:48798596-48798615 None:intergenic 30.0%
!!! TTCATATCCCATTTTGATTG+AGG + chr1_4:48798774-48798793 Msa0167070:three_prime_UTR 30.0%
TCGTAAACAACGCAAACAAA+AGG + chr1_4:48794223-48794242 Msa0167070:CDS 35.0%
CGTAAACAACGCAAACAAAA+GGG + chr1_4:48794224-48794243 Msa0167070:CDS 35.0%
! GGTGAAGGATTATTTGTTGA+TGG + chr1_4:48794322-48794341 Msa0167070:CDS 35.0%
! GAAGGATTATTTGTTGATGG+AGG + chr1_4:48794325-48794344 Msa0167070:CDS 35.0%
!! TCATGCTATTGTTTCGAGTT+CGG + chr1_4:48794478-48794497 Msa0167070:CDS 35.0%
ATACTGTTTGAGGGAGATTA+TGG + chr1_4:48794821-48794840 Msa0167070:intron 35.0%
TGATGTAACTAAAGTATGGG+AGG + chr1_4:48795038-48795057 Msa0167070:intron 35.0%
GATGTAACTAAAGTATGGGA+GGG + chr1_4:48795039-48795058 Msa0167070:intron 35.0%
!! TCGGAGTAATTTGCTGTTTA+AGG + chr1_4:48795225-48795244 Msa0167070:intron 35.0%
!! ATTTGCTGTTTAAGGTAGAC+TGG + chr1_4:48795233-48795252 Msa0167070:intron 35.0%
!! TTTGCTGTTTAAGGTAGACT+GGG + chr1_4:48795234-48795253 Msa0167070:intron 35.0%
TTCATCGAAAGGAGATGAAT+GGG - chr1_4:48795293-48795312 None:intergenic 35.0%
ATTCATCGAAAGGAGATGAA+TGG - chr1_4:48795294-48795313 None:intergenic 35.0%
AAGCGCATAAATTCATCGAA+AGG - chr1_4:48795304-48795323 None:intergenic 35.0%
!! TAGTTGCTGTTTAATGTGAC+TGG + chr1_4:48795655-48795674 Msa0167070:intron 35.0%
!! AGTTGCTGTTTAATGTGACT+GGG + chr1_4:48795656-48795675 Msa0167070:intron 35.0%
TGTTTAATGTGACTGGGAAT+GGG + chr1_4:48795662-48795681 Msa0167070:intron 35.0%
ACTTCTTCAAAAGGATACGA+AGG - chr1_4:48795736-48795755 None:intergenic 35.0%
CTCCCAAACCAATTATAGTA+TGG - chr1_4:48795777-48795796 None:intergenic 35.0%
ATGTCAGCATAAGATTCCAA+AGG - chr1_4:48796008-48796027 None:intergenic 35.0%
TTGGAATCTTATGCTGACAT+TGG + chr1_4:48796008-48796027 Msa0167070:CDS 35.0%
GCAGATTCAGGAAATTAAAG+AGG + chr1_4:48796043-48796062 Msa0167070:CDS 35.0%
TATAGTTCAGGATGTGTAAG+GGG - chr1_4:48796080-48796099 None:intergenic 35.0%
CATATAGTTCAGGATGTGTA+AGG - chr1_4:48796082-48796101 None:intergenic 35.0%
TATAATATGACCCCTTTAGG+TGG - chr1_4:48796122-48796141 None:intergenic 35.0%
CCATATAATATGACCCCTTT+AGG - chr1_4:48796125-48796144 None:intergenic 35.0%
CCTAAAGGGGTCATATTATA+TGG + chr1_4:48796122-48796141 Msa0167070:CDS 35.0%
GTCATATTATATGGAGAACC+TGG + chr1_4:48796131-48796150 Msa0167070:CDS 35.0%
TGAAAATCTCTGTGTTTAGG+GGG + chr1_4:48796448-48796467 Msa0167070:intron 35.0%
! GGATTCCTTATGTACTGTTT+TGG + chr1_4:48796474-48796493 Msa0167070:intron 35.0%
!! TTCCTTATGTACTGTTTTGG+GGG + chr1_4:48796477-48796496 Msa0167070:intron 35.0%
!! ATACAAAAGTACTTGGGAGA+TGG + chr1_4:48796869-48796888 Msa0167070:CDS 35.0%
! AAAAGTTCCCTCACAAGTTT+TGG - chr1_4:48796896-48796915 None:intergenic 35.0%
AATAGCAGGAGAAAGATCAT+CGG - chr1_4:48796927-48796946 None:intergenic 35.0%
ATTGATGAAATTGATGCGGT+CGG + chr1_4:48796953-48796972 Msa0167070:CDS 35.0%
! TTTAGGATTCATATAGGTGG+GGG + chr1_4:48797006-48797025 Msa0167070:intron 35.0%
TGATGCATTGTATCACTTCA+TGG + chr1_4:48797039-48797058 Msa0167070:intron 35.0%
ATCACTTCATGGACTCTTTA+AGG + chr1_4:48797050-48797069 Msa0167070:intron 35.0%
AGGAGATGTAAAAGTGATTC+TGG + chr1_4:48797202-48797221 Msa0167070:CDS 35.0%
!!! CTTGTTTTGATATCAGGAAG+AGG - chr1_4:48797299-48797318 None:intergenic 35.0%
!!! CGTCTTCTTGTTTTGATATC+AGG - chr1_4:48797305-48797324 None:intergenic 35.0%
! AACAAGAAGACGTATTTTCC+AGG + chr1_4:48797313-48797332 Msa0167070:CDS 35.0%
!! TTGTTTCTGTTGATTCCATG+TGG + chr1_4:48797366-48797385 Msa0167070:intron 35.0%
! ATTAGCTGATGATGTCAACT+TGG + chr1_4:48797475-48797494 Msa0167070:CDS 35.0%
!! GGAAGAATTTGTTATGACGA+AGG + chr1_4:48797496-48797515 Msa0167070:CDS 35.0%
!! ATTCTCTGGAGCTGATATAA+AGG + chr1_4:48797523-48797542 Msa0167070:CDS 35.0%
CGCCCTTAGCATAATATATT+TGG - chr1_4:48797687-48797706 None:intergenic 35.0%
!!! GGATGCCATGCAAATTTTTT+AGG - chr1_4:48797827-48797846 None:intergenic 35.0%
AAGTTGTAGTTGTTGGAACT+GGG - chr1_4:48797924-48797943 None:intergenic 35.0%
TAAGTTGTAGTTGTTGGAAC+TGG - chr1_4:48797925-48797944 None:intergenic 35.0%
TGATCCAAAAGAACAAAAGC+AGG - chr1_4:48798107-48798126 None:intergenic 35.0%
CTCAGATATCCTGTCAATAT+AGG - chr1_4:48798213-48798232 None:intergenic 35.0%
!! GCATGTCTTGACTTTAGAAT+GGG + chr1_4:48798239-48798258 Msa0167070:intron 35.0%
ATCCTTTGCCTTCTTAAAGT+CGG - chr1_4:48798504-48798523 None:intergenic 35.0%
CTTCACATATATAGTCCTTC+TGG - chr1_4:48798557-48798576 None:intergenic 35.0%
ACTTTATCCATATGCAGTTG+TGG + chr1_4:48798675-48798694 Msa0167070:three_prime_UTR 35.0%
ATTTCATCCACAACTGCATA+TGG - chr1_4:48798685-48798704 None:intergenic 35.0%
!! CTTTCAAATTTCACCGACTT+TGG + chr1_4:48798744-48798763 Msa0167070:three_prime_UTR 35.0%
AGAGAGACCTCAATCAAAAT+GGG - chr1_4:48798784-48798803 None:intergenic 35.0%
TAGAGAGACCTCAATCAAAA+TGG - chr1_4:48798785-48798804 None:intergenic 35.0%
! AAAGTGTTTGGCACGTTCAA+GGG - chr1_4:48794047-48794066 None:intergenic 40.0%
! TAAAGTGTTTGGCACGTTCA+AGG - chr1_4:48794048-48794067 None:intergenic 40.0%
ATTTCCAAATCGATCGACGA+TGG + chr1_4:48794085-48794104 Msa0167070:exon 40.0%
TTTCCAAATCGATCGACGAT+GGG + chr1_4:48794086-48794105 Msa0167070:exon 40.0%
!! AGTTTGTTGCGTATCAAGAG+AGG + chr1_4:48794351-48794370 Msa0167070:CDS 40.0%
!! TCTAAGGTTGATGATCTACG+TGG + chr1_4:48794410-48794429 Msa0167070:CDS 40.0%
!! CTATTGTTTCGAGTTCGGTT+GGG + chr1_4:48794483-48794502 Msa0167070:CDS 40.0%
TGCATCAAAATAGCACAACC+AGG - chr1_4:48794560-48794579 None:intergenic 40.0%
ATTAGTCGCGATACTGTTTG+AGG + chr1_4:48794811-48794830 Msa0167070:intron 40.0%
TTAGTCGCGATACTGTTTGA+GGG + chr1_4:48794812-48794831 Msa0167070:intron 40.0%
!! CAAAAAGATACGGCCTTGTT+TGG - chr1_4:48795002-48795021 None:intergenic 40.0%
! CAAACAAGGCCGTATCTTTT+TGG + chr1_4:48795000-48795019 Msa0167070:intron 40.0%
! TGTTTAAGGTAGACTGGGAA+TGG + chr1_4:48795239-48795258 Msa0167070:intron 40.0%
! GTTTAAGGTAGACTGGGAAT+GGG + chr1_4:48795240-48795259 Msa0167070:intron 40.0%
!! CAAAAAGACAAGGCCTTGTT+TGG - chr1_4:48795528-48795547 None:intergenic 40.0%
!! CAAACAAGGCCTTGTCTTTT+TGG + chr1_4:48795526-48795545 Msa0167070:intron 40.0%
CTGTTTAATGTGACTGGGAA+TGG + chr1_4:48795661-48795680 Msa0167070:intron 40.0%
! GAGCATCTGAATTTTGAACC+TGG + chr1_4:48795794-48795813 Msa0167070:intron 40.0%
! TATCAGGTTCTATCGGTTGT+TGG + chr1_4:48795927-48795946 Msa0167070:intron 40.0%
ACTTTCATGACTGAGACCAT+TGG - chr1_4:48795975-48795994 None:intergenic 40.0%
GAATCTTATGCTGACATTGG+TGG + chr1_4:48796011-48796030 Msa0167070:CDS 40.0%
TTATATGGAGAACCTGGAAC+AGG + chr1_4:48796137-48796156 Msa0167070:CDS 40.0%
AGTTCAAACCTTTGCAAGCA+AGG - chr1_4:48796168-48796187 None:intergenic 40.0%
! GCTATTTGTCTGTTGCTTAC+AGG + chr1_4:48796366-48796385 Msa0167070:intron 40.0%
!! TGTTGCTTACAGGTACTGAA+GGG + chr1_4:48796376-48796395 Msa0167070:intron 40.0%
AAAAACATGCACACTCGCAA+AGG - chr1_4:48796581-48796600 None:intergenic 40.0%
! CTAACTGATAGTGCATGTGA+TGG - chr1_4:48796768-48796787 None:intergenic 40.0%
CATCACATGCACTATCAGTT+AGG + chr1_4:48796766-48796785 Msa0167070:intron 40.0%
AGATGGTCCAAAACTTGTGA+GGG + chr1_4:48796886-48796905 Msa0167070:CDS 40.0%
GTGGAGAACGTGAAATTCAA+AGG + chr1_4:48797135-48797154 Msa0167070:CDS 40.0%
ATCTTCCTATCAATACGACC+AGG - chr1_4:48797269-48797288 None:intergenic 40.0%
ATGACGAAGGATGAATTCTC+TGG + chr1_4:48797509-48797528 Msa0167070:CDS 40.0%
AAGGCAATATGTACTGAAGC+TGG + chr1_4:48797542-48797561 Msa0167070:CDS 40.0%
ATATTATGCTAAGGGCGAGT+TGG + chr1_4:48797690-48797709 Msa0167070:intron 40.0%
TATTATGCTAAGGGCGAGTT+GGG + chr1_4:48797691-48797710 Msa0167070:intron 40.0%
!! AAATCGTGGAAAGTACTCCT+TGG + chr1_4:48798061-48798080 Msa0167070:intron 40.0%
CAAAAGAACAAAAGCAGGCT+TGG - chr1_4:48798102-48798121 None:intergenic 40.0%
!! CAAGCCTGCTTTTGTTCTTT+TGG + chr1_4:48798100-48798119 Msa0167070:intron 40.0%
! GGCATGTCTTGACTTTAGAA+TGG + chr1_4:48798238-48798257 Msa0167070:intron 40.0%
TCCTTTGCCTTCTTAAAGTC+GGG - chr1_4:48798503-48798522 None:intergenic 40.0%
AAGAAGGTCGGGGATAATAA+AGG - chr1_4:48798586-48798605 None:intergenic 40.0%
TGAGGCTGTTAAAGCTTGAG+AGG + chr1_4:48794300-48794319 Msa0167070:CDS 45.0%
GAGGCTGTTAAAGCTTGAGA+GGG + chr1_4:48794301-48794320 Msa0167070:CDS 45.0%
GTTAAAGCTTGAGAGGGTGA+AGG + chr1_4:48794307-48794326 Msa0167070:CDS 45.0%
TCCAGATTCCCAACACTCAT+CGG - chr1_4:48794440-48794459 None:intergenic 45.0%
!! GCTATTGTTTCGAGTTCGGT+TGG + chr1_4:48794482-48794501 Msa0167070:CDS 45.0%
! TTGGGCCGGAGTATTATGTT+GGG + chr1_4:48794501-48794520 Msa0167070:CDS 45.0%
GATAAGGATCAATTGGAGCC+TGG + chr1_4:48794539-48794558 Msa0167070:CDS 45.0%
GGAGGGTTGAGAATTAAGAG+TGG + chr1_4:48795056-48795075 Msa0167070:intron 45.0%
! TGCTGTTTGAGAGTTGAGAG+CGG + chr1_4:48795163-48795182 Msa0167070:intron 45.0%
ACTAGAGTGAATCGAGGCAT+CGG + chr1_4:48795206-48795225 Msa0167070:intron 45.0%
TACCAGCCACACTGTAATTG+CGG + chr1_4:48795331-48795350 Msa0167070:intron 45.0%
TCTCAACCGCAATTACAGTG+TGG - chr1_4:48795340-48795359 None:intergenic 45.0%
GCTAACGAGCCAAAAAGACA+AGG - chr1_4:48795538-48795557 None:intergenic 45.0%
GATCAACTTCGTCTTGCAGA+AGG - chr1_4:48795953-48795972 None:intergenic 45.0%
! GCAAGACGAAGTTGATCCAA+TGG + chr1_4:48795956-48795975 Msa0167070:CDS 45.0%
CTCAGTCATGAAAGTCGAGA+AGG + chr1_4:48795980-48795999 Msa0167070:CDS 45.0%
TGGTTTAGATGCGCAGATTC+AGG + chr1_4:48796031-48796050 Msa0167070:CDS 45.0%
ATTGGCATCAAGCCACCTAA+AGG + chr1_4:48796107-48796126 Msa0167070:CDS 45.0%
TTGGCATCAAGCCACCTAAA+GGG + chr1_4:48796108-48796127 Msa0167070:CDS 45.0%
AGGAAAGACCTTGCTTGCAA+AGG + chr1_4:48796157-48796176 Msa0167070:CDS 45.0%
!! CTGTTGCTTACAGGTACTGA+AGG + chr1_4:48796375-48796394 Msa0167070:intron 45.0%
ATCTCTGTGTTTAGGGGGAT+TGG + chr1_4:48796453-48796472 Msa0167070:intron 45.0%
CACCCCCAAAACAGTACATA+AGG - chr1_4:48796482-48796501 None:intergenic 45.0%
!!! CTTATGTACTGTTTTGGGGG+TGG + chr1_4:48796480-48796499 Msa0167070:intron 45.0%
! ACAGTTTGCTCTTCTGTCTG+TGG + chr1_4:48796614-48796633 Msa0167070:intron 45.0%
ATACATGCTCTTGTGCCTTC+AGG + chr1_4:48796793-48796812 Msa0167070:intron 45.0%
GCTACATTCTTGCGTGTAGT+AGG + chr1_4:48796836-48796855 Msa0167070:CDS 45.0%
GAGATGGTCCAAAACTTGTG+AGG + chr1_4:48796885-48796904 Msa0167070:CDS 45.0%
! GCTGCTGAACCCACAATTTT+AGG + chr1_4:48796989-48797008 Msa0167070:intron 45.0%
GAGTGAGCATCATACCTGTA+AGG - chr1_4:48797113-48797132 None:intergenic 45.0%
TACAGGTATGATGCTCACTC+AGG + chr1_4:48797113-48797132 Msa0167070:intron 45.0%
GAGTTGCTGAACCAGTTAGA+TGG + chr1_4:48797167-48797186 Msa0167070:CDS 45.0%
! TACGACCTGGTCGTATTGAT+AGG + chr1_4:48797261-48797280 Msa0167070:CDS 45.0%
! AAGCTGGCTTACTTGCTCTA+AGG + chr1_4:48797558-48797577 Msa0167070:CDS 45.0%
! AGCTGGCTTACTTGCTCTAA+GGG + chr1_4:48797559-48797578 Msa0167070:CDS 45.0%
ATTATGCTAAGGGCGAGTTG+GGG + chr1_4:48797692-48797711 Msa0167070:intron 45.0%
! TATTGGGTTAGGGTTGTCTG+TGG + chr1_4:48797768-48797787 Msa0167070:intron 45.0%
! ATTGGGTTAGGGTTGTCTGT+GGG + chr1_4:48797769-48797788 Msa0167070:intron 45.0%
TAGTTGTTGGAACTGGGAAG+AGG - chr1_4:48797918-48797937 None:intergenic 45.0%
!!! GGTGTTTTAAAGAGGCACCA+AGG - chr1_4:48798081-48798100 None:intergenic 45.0%
!!! GCAGGCTTGGTGTTTTAAAG+AGG - chr1_4:48798089-48798108 None:intergenic 45.0%
ATCATCATACTTTCCCGCGA+GGG + chr1_4:48798123-48798142 Msa0167070:intron 45.0%
CTGGGTAGTCCTATATTGAC+AGG + chr1_4:48798201-48798220 Msa0167070:intron 45.0%
CTAAAGTCAAGACATGCCTC+AGG - chr1_4:48798236-48798255 None:intergenic 45.0%
! GACTCATCCCGACTTTAAGA+AGG + chr1_4:48798493-48798512 Msa0167070:CDS 45.0%
! TCCCGACTTTAAGAAGGCAA+AGG + chr1_4:48798499-48798518 Msa0167070:CDS 45.0%
!! AAGAAAGAAGGAGTGCCAGA+AGG + chr1_4:48798539-48798558 Msa0167070:CDS 45.0%
TGACCCATCGTCGATCGATT+TGG - chr1_4:48794092-48794111 None:intergenic 50.0%
AATCGATCGACGATGGGTCA+AGG + chr1_4:48794092-48794111 Msa0167070:exon 50.0%
!! TGTCGCTTCCGTCTTGTTTC+CGG - chr1_4:48794157-48794176 None:intergenic 50.0%
CTCAGCTTGCACTTCGATAC+CGG - chr1_4:48794284-48794303 None:intergenic 50.0%
TCAAGAGAGGTTGAAGCCTC+AGG + chr1_4:48794364-48794383 Msa0167070:CDS 50.0%
GGCGGAGGAAGATAGATCTA+AGG + chr1_4:48794394-48794413 Msa0167070:CDS 50.0%
!! GATGAGTGTTGGGAATCTGG+AGG + chr1_4:48794439-48794458 Msa0167070:CDS 50.0%
! GTTGGGCCGGAGTATTATGT+TGG + chr1_4:48794500-48794519 Msa0167070:CDS 50.0%
TAGACTGGGAATGGGAGTTG+TGG + chr1_4:48795248-48795267 Msa0167070:intron 50.0%
AACCGCAATTACAGTGTGGC+TGG - chr1_4:48795336-48795355 None:intergenic 50.0%
ATGCAGCGCAACTGAAGTGT+GGG + chr1_4:48795566-48795585 Msa0167070:intron 50.0%
!! GGACGGTTGAGAGTTGATAG+TGG + chr1_4:48795587-48795606 Msa0167070:intron 50.0%
GAAAGTCGAGAAGGCTCCTT+TGG + chr1_4:48795989-48796008 Msa0167070:CDS 50.0%
TGGCATCAAGCCACCTAAAG+GGG + chr1_4:48796109-48796128 Msa0167070:CDS 50.0%
AGCAAGGTCTTTCCTGTTCC+AGG - chr1_4:48796152-48796171 None:intergenic 50.0%
TTGAGTTTGCCACAGCCTGA+AGG - chr1_4:48796811-48796830 None:intergenic 50.0%
TTGATGCGGTCGGTACAAAG+AGG + chr1_4:48796963-48796982 Msa0167070:CDS 50.0%
AGGTATGATGCTCACTCAGG+TGG + chr1_4:48797116-48797135 Msa0167070:intron 50.0%
TCTAAGGGAACGCCGAATGA+AGG + chr1_4:48797574-48797593 Msa0167070:CDS 50.0%
!! GAGTTGGGGTGGATTGGTTA+TGG + chr1_4:48797706-48797725 Msa0167070:intron 50.0%
TTGTTGGAACTGGGAAGAGG+TGG - chr1_4:48797915-48797934 None:intergenic 50.0%
GATCATCATACTTTCCCGCG+AGG + chr1_4:48798122-48798141 Msa0167070:intron 50.0%
ACACTGGAATCCTCCCAGTT+GGG - chr1_4:48798153-48798172 None:intergenic 50.0%
TGACAGGATATCTGAGCCTG+AGG + chr1_4:48798217-48798236 Msa0167070:intron 50.0%
ACGATGGGTCAAGGAACTCC+TGG + chr1_4:48794101-48794120 Msa0167070:exon 55.0%
ATGGGTCAAGGAACTCCTGG+CGG + chr1_4:48794104-48794123 Msa0167070:CDS 55.0%
ATGAACCGACAAGGCCATCC+CGG + chr1_4:48794128-48794147 Msa0167070:CDS 55.0%
!! TCCGTCTTGTTTCCGGTCAC+CGG - chr1_4:48794150-48794169 None:intergenic 55.0%
ATTCGAACCAGCAGCACCAC+CGG + chr1_4:48794190-48794209 Msa0167070:CDS 55.0%
TGTTTACGACCTACACGCGC+CGG - chr1_4:48794212-48794231 None:intergenic 55.0%
TTCGATACCGGAGTCACCGT+CGG - chr1_4:48794272-48794291 None:intergenic 55.0%
! CGGTATCGAAGTGCAAGCTG+AGG + chr1_4:48794282-48794301 Msa0167070:CDS 55.0%
AGAGAGGTTGAAGCCTCAGG+AGG + chr1_4:48794367-48794386 Msa0167070:CDS 55.0%
GTTGAAGCCTCAGGAGGAGA+AGG + chr1_4:48794373-48794392 Msa0167070:CDS 55.0%
!! GCCGATGAGTGTTGGGAATC+TGG + chr1_4:48794436-48794455 Msa0167070:CDS 55.0%
!! TGTTTCGAGTTCGGTTGGGC+CGG + chr1_4:48794487-48794506 Msa0167070:CDS 55.0%
GATGCAGCGCAACTGAAGTG+TGG + chr1_4:48795565-48795584 Msa0167070:intron 55.0%
AGCGCAACTGAAGTGTGGGA+CGG + chr1_4:48795570-48795589 Msa0167070:intron 55.0%
GATCCAGCTTTGCTACGACC+TGG + chr1_4:48797248-48797267 Msa0167070:CDS 55.0%
GTTAGGGTTGTCTGTGGGTG+TGG + chr1_4:48797774-48797793 Msa0167070:intron 55.0%
TCATACTTTCCCGCGAGGGA+TGG + chr1_4:48798127-48798146 Msa0167070:intron 55.0%
GACACTGGAATCCTCCCAGT+TGG - chr1_4:48798154-48798173 None:intergenic 55.0%
CTTGTTTCCGGTCACCGGGA+TGG - chr1_4:48794145-48794164 None:intergenic 60.0%
!! CCGTCTTGTTTCCGGTCACC+GGG - chr1_4:48794149-48794168 None:intergenic 60.0%
CCCGGTGACCGGAAACAAGA+CGG + chr1_4:48794146-48794165 Msa0167070:CDS 60.0%
! AGGGTCCAGATGCCGCTTCA+CGG + chr1_4:48794243-48794262 Msa0167070:CDS 60.0%
GGTAACCGTGAAGCGGCATC+TGG - chr1_4:48794251-48794270 None:intergenic 60.0%
! TGCCGCTTCACGGTTACCGA+CGG + chr1_4:48794253-48794272 Msa0167070:CDS 60.0%
CACCGTCGGTAACCGTGAAG+CGG - chr1_4:48794258-48794277 None:intergenic 60.0%
ACGGTTACCGACGGTGACTC+CGG + chr1_4:48794262-48794281 Msa0167070:CDS 60.0%
GAAGCCTCAGGAGGAGAAGG+CGG + chr1_4:48794376-48794395 Msa0167070:CDS 60.0%
GTGGCTCGCCGATGAGTGTT+GGG + chr1_4:48794429-48794448 Msa0167070:CDS 60.0%
GTGACTGGGAATGGGAGTCG+AGG + chr1_4:48795670-48795689 Msa0167070:intron 60.0%
GCTCTTGTGCCTTCAGGCTG+TGG + chr1_4:48796799-48796818 Msa0167070:intron 60.0%
CGACCAGGTCGTAGCAAAGC+TGG - chr1_4:48797254-48797273 None:intergenic 60.0%
! ATGCTAAGGGCGAGTTGGGG+TGG + chr1_4:48797695-48797714 Msa0167070:intron 60.0%
! AAGGGCGAGTTGGGGTGGAT+TGG + chr1_4:48797700-48797719 Msa0167070:intron 60.0%
!! CCTTGTCGGTTCATGCCGCC+AGG - chr1_4:48794122-48794141 None:intergenic 65.0%
CCTGGCGGCATGAACCGACA+AGG + chr1_4:48794119-48794138 Msa0167070:CDS 65.0%
!! GGTCACCGGGATGGCCTTGT+CGG - chr1_4:48794136-48794155 None:intergenic 65.0%
GACAAGGCCATCCCGGTGAC+CGG + chr1_4:48794135-48794154 Msa0167070:CDS 65.0%
TTACGACCTACACGCGCCGG+TGG - chr1_4:48794209-48794228 None:intergenic 65.0%
TCCTCCGCCTTCTCCTCCTG+AGG - chr1_4:48794383-48794402 None:intergenic 65.0%
CGTGGCTCGCCGATGAGTGT+TGG + chr1_4:48794428-48794447 Msa0167070:CDS 65.0%
GCCTCAGGAGGAGAAGGCGG+AGG + chr1_4:48794379-48794398 Msa0167070:CDS 70.0%
CCAGTTGGGCCATCCCTCGC+GGG - chr1_4:48798139-48798158 None:intergenic 70.0%
CCCAGTTGGGCCATCCCTCG+CGG - chr1_4:48798140-48798159 None:intergenic 70.0%
CCGCGAGGGATGGCCCAACT+GGG + chr1_4:48798137-48798156 Msa0167070:intron 70.0%
CGAGGGATGGCCCAACTGGG+AGG + chr1_4:48798140-48798159 Msa0167070:intron 70.0%
!! ACACGCGCCGGTGGTGCTGC+TGG - chr1_4:48794200-48794219 None:intergenic 75.0%
GCAGCACCACCGGCGCGTGT+AGG + chr1_4:48794200-48794219 Msa0167070:CDS 75.0%
CCCGCGAGGGATGGCCCAAC+TGG + chr1_4:48798136-48798155 Msa0167070:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 48794005 48798831 48794005 ID=Msa0167070;Name=Msa0167070
chr1_4 mRNA 48794005 48798831 48794005 ID=Msa0167070-mRNA-1;Parent=Msa0167070;Name=Msa0167070-mRNA-1;_AED=0.07;_eAED=0.07;_QI=99|1|1|1|1|1|6|257|446
chr1_4 exon 48794005 48794586 48794005 ID=Msa0167070-mRNA-1:exon:14269;Parent=Msa0167070-mRNA-1
chr1_4 exon 48795933 48796178 48795933 ID=Msa0167070-mRNA-1:exon:14270;Parent=Msa0167070-mRNA-1
chr1_4 exon 48796815 48796984 48796815 ID=Msa0167070-mRNA-1:exon:14271;Parent=Msa0167070-mRNA-1
chr1_4 exon 48797118 48797334 48797118 ID=Msa0167070-mRNA-1:exon:14272;Parent=Msa0167070-mRNA-1
chr1_4 exon 48797455 48797595 48797455 ID=Msa0167070-mRNA-1:exon:14273;Parent=Msa0167070-mRNA-1
chr1_4 exon 48798491 48798831 48798491 ID=Msa0167070-mRNA-1:exon:14274;Parent=Msa0167070-mRNA-1
chr1_4 five_prime_UTR 48794005 48794103 48794005 ID=Msa0167070-mRNA-1:five_prime_utr;Parent=Msa0167070-mRNA-1
chr1_4 CDS 48794104 48794586 48794104 ID=Msa0167070-mRNA-1:cds;Parent=Msa0167070-mRNA-1
chr1_4 CDS 48795933 48796178 48795933 ID=Msa0167070-mRNA-1:cds;Parent=Msa0167070-mRNA-1
chr1_4 CDS 48796815 48796984 48796815 ID=Msa0167070-mRNA-1:cds;Parent=Msa0167070-mRNA-1
chr1_4 CDS 48797118 48797334 48797118 ID=Msa0167070-mRNA-1:cds;Parent=Msa0167070-mRNA-1
chr1_4 CDS 48797455 48797595 48797455 ID=Msa0167070-mRNA-1:cds;Parent=Msa0167070-mRNA-1
chr1_4 CDS 48798491 48798574 48798491 ID=Msa0167070-mRNA-1:cds;Parent=Msa0167070-mRNA-1
chr1_4 three_prime_UTR 48798575 48798831 48798575 ID=Msa0167070-mRNA-1:three_prime_utr;Parent=Msa0167070-mRNA-1
Gene Sequence

>Msa0167070

ATGGGTCAAGGAACTCCTGGCGGCATGAACCGACAAGGCCATCCCGGTGACCGGAAACAAGACGGAAGCGACAAAAAAGAAAAGAAATTCGAACCAGCAGCACCACCGGCGCGTGTAGGTCGTAAACAACGCAAACAAAAGGGTCCAGATGCCGCTTCACGGTTACCGACGGTGACTCCGGTATCGAAGTGCAAGCTGAGGCTGTTAAAGCTTGAGAGGGTGAAGGATTATTTGTTGATGGAGGAAGAGTTTGTTGCGTATCAAGAGAGGTTGAAGCCTCAGGAGGAGAAGGCGGAGGAAGATAGATCTAAGGTTGATGATCTACGTGGCTCGCCGATGAGTGTTGGGAATCTGGAGGAATTGATTGATGAGAATCATGCTATTGTTTCGAGTTCGGTTGGGCCGGAGTATTATGTTGGGATTTTATCTTTTGTTGATAAGGATCAATTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGGTTCTATCGGTTGTTGGCCTTCTGCAAGACGAAGTTGATCCAATGGTCTCAGTCATGAAAGTCGAGAAGGCTCCTTTGGAATCTTATGCTGACATTGGTGGTTTAGATGCGCAGATTCAGGAAATTAAAGAGGCAGTTGAGCTACCCCTTACACATCCTGAACTATATGAAGATATTGGCATCAAGCCACCTAAAGGGGTCATATTATATGGAGAACCTGGAACAGGAAAGACCTTGCTTGCAAAGGCTGTGGCAAACTCAACATCAGCTACATTCTTGCGTGTAGTAGGTAGTGAATTGATACAAAAGTACTTGGGAGATGGTCCAAAACTTGTGAGGGAACTTTTCAGAGTTGCCGATGATCTTTCTCCTGCTATTGTTTTCATTGATGAAATTGATGCGGTCGGTACAAAGAGGTATGATGCTCACTCAGGTGGAGAACGTGAAATTCAAAGGACTATGTTAGAGTTGCTGAACCAGTTAGATGGTTTTGATTCAAGAGGAGATGTAAAAGTGATTCTGGCTACCAACAGAATTGAAAGTCTTGATCCAGCTTTGCTACGACCTGGTCGTATTGATAGGAAGATTGAATTTCCTCTTCCTGATATCAAAACAAGAAGACGTATTTTCCAGATACACACATCAAGGATGACATTAGCTGATGATGTCAACTTGGAAGAATTTGTTATGACGAAGGATGAATTCTCTGGAGCTGATATAAAGGCAATATGTACTGAAGCTGGCTTACTTGCTCTAAGGGAACGCCGAATGAAGGTGACTCATCCCGACTTTAAGAAGGCAAAGGATAAAGTGATGTTTAAGAAGAAAGAAGGAGTGCCAGAAGGACTATATATGTGA
Protein sequence

>Msa0167070

MGQGTPGGMNRQGHPGDRKQDGSDKKEKKFEPAAPPARVGRKQRKQKGPDAASRLPTVTPVSKCKLRLLKLERVKDYLLMEEEFVAYQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPAIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKDKVMFKKKEGVPEGLYM*