Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080250 | XP_003591197.1 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1098 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080250 | sp|Q96321|IMPA1_ARATH | 82.836 | 536 | 84 | 6 | 1 | 532 | 1 | 532 | 0.0 | 897 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080250 | G7I9F7 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1098 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0080250 | 0.836097 | 1.142608e-56 | -8.615850e-47 |
| Msa0003270 | Msa0080250 | 0.824631 | 7.270990e-54 | -8.615850e-47 |
| Msa0010770 | Msa0080250 | 0.805260 | 1.454416e-49 | -8.615850e-47 |
| Msa0032530 | Msa0080250 | 0.870831 | 1.083583e-66 | -8.615850e-47 |
| Msa0047640 | Msa0080250 | 0.863356 | 2.638461e-64 | -8.615850e-47 |
| Msa0051970 | Msa0080250 | 0.816700 | 4.831188e-52 | -8.615850e-47 |
| Msa0074750 | Msa0080250 | 0.804224 | 2.394000e-49 | -8.615850e-47 |
| Msa0080250 | Msa0125790 | 0.837856 | 4.059867e-57 | -8.615850e-47 |
| Msa0080250 | Msa0127530 | 0.800813 | 1.208457e-48 | -8.615850e-47 |
| Msa0080250 | Msa0131700 | 0.863243 | 2.860520e-64 | -8.615850e-47 |
| Msa0080250 | Msa0137540 | 0.810233 | 1.276499e-50 | -8.615850e-47 |
| Msa0080250 | Msa0138050 | 0.808787 | 2.608973e-50 | -8.615850e-47 |
| Msa0080250 | Msa0138210 | 0.803680 | 3.106096e-49 | -8.615850e-47 |
| Msa0080250 | Msa0144780 | 0.814913 | 1.209384e-51 | -8.615850e-47 |
| Msa0080250 | Msa0146080 | 0.804390 | 2.210537e-49 | -8.615850e-47 |
| Msa0080250 | Msa0167070 | 0.823417 | 1.401161e-53 | -8.615850e-47 |
| Msa0080250 | Msa0188700 | 0.813895 | 2.030289e-51 | -8.615850e-47 |
| Msa0080250 | Msa0247060 | 0.801678 | 8.038162e-49 | -8.615850e-47 |
| Msa0080250 | Msa0270200 | 0.818303 | 2.102925e-52 | -8.615850e-47 |
| Msa0080250 | Msa0279390 | 0.808675 | 2.756937e-50 | -8.615850e-47 |
| Msa0080250 | Msa0307860 | 0.824925 | 6.195941e-54 | -8.615850e-47 |
| Msa0080250 | Msa0435080 | 0.801739 | 7.811816e-49 | -8.615850e-47 |
| Msa0080250 | Msa0511150 | 0.833866 | 4.168629e-56 | -8.615850e-47 |
| Msa0080250 | Msa0513370 | 0.811809 | 5.812946e-51 | -8.615850e-47 |
| Msa0080250 | Msa0518960 | 0.826399 | 2.772119e-54 | -8.615850e-47 |
| Msa0080250 | Msa0534980 | 0.831947 | 1.250414e-55 | -8.615850e-47 |
| Msa0080250 | Msa0544730 | 0.844015 | 9.819868e-59 | -8.615850e-47 |
| Msa0080250 | Msa0547680 | 0.852656 | 4.000337e-61 | -8.615850e-47 |
| Msa0080250 | Msa0549790 | 0.809812 | 1.572595e-50 | -8.615850e-47 |
| Msa0080250 | Msa0608270 | 0.834803 | 2.425927e-56 | -8.615850e-47 |
| Msa0080250 | Msa0639150 | 0.830619 | 2.651389e-55 | -8.615850e-47 |
| Msa0080250 | Msa0648830 | 0.837141 | 6.192577e-57 | -8.615850e-47 |
| Msa0080250 | Msa0689760 | 0.810201 | 1.296610e-50 | -8.615850e-47 |
| Msa0080250 | Msa0698100 | 0.813476 | 2.511208e-51 | -8.615850e-47 |
| Msa0080250 | Msa0716860 | 0.809662 | 1.693717e-50 | -8.615850e-47 |
| Msa0080250 | Msa0740500 | 0.804547 | 2.049637e-49 | -8.615850e-47 |
| Msa0080250 | Msa0749400 | 0.806003 | 1.015907e-49 | -8.615850e-47 |
| Msa0080250 | Msa0760770 | 0.823769 | 1.158913e-53 | -8.615850e-47 |
| Msa0080250 | Msa0788120 | 0.809775 | 1.601299e-50 | -8.615850e-47 |
| Msa0080250 | Msa0790410 | 0.816813 | 4.556504e-52 | -8.615850e-47 |
| Msa0080250 | Msa0826510 | 0.807387 | 5.180877e-50 | -8.615850e-47 |
| Msa0080250 | Msa0865620 | 0.805699 | 1.177005e-49 | -8.615850e-47 |
| Msa0080250 | Msa0905590 | 0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0080250 | Msa0969330 | 0.813730 | 2.207526e-51 | -8.615850e-47 |
| Msa0080250 | Msa1036740 | 0.805934 | 1.050251e-49 | -8.615850e-47 |
| Msa0080250 | Msa1072600 | 0.859560 | 3.799969e-63 | -8.615850e-47 |
| Msa0080250 | Msa1074110 | 0.813384 | 2.630819e-51 | -8.615850e-47 |
| Msa0080250 | Msa1095790 | 0.858640 | 7.171700e-63 | -8.615850e-47 |
| Msa0080250 | Msa1127430 | 0.838715 | 2.438759e-57 | -8.615850e-47 |
| Msa0080250 | Msa1127540 | 0.814683 | 1.359620e-51 | -8.615850e-47 |
| Msa0080250 | Msa1158700 | 0.821311 | 4.319954e-53 | -8.615850e-47 |
| Msa0080250 | Msa1217670 | 0.800750 | 1.244757e-48 | -8.615850e-47 |
| Msa0080250 | Msa1227320 | 0.818618 | 1.784631e-52 | -8.615850e-47 |
| Msa0080250 | Msa1254620 | 0.812434 | 4.247807e-51 | -8.615850e-47 |
| Msa0080250 | Msa1268680 | 0.815647 | 8.303656e-52 | -8.615850e-47 |
| Msa0080250 | Msa1329790 | 0.805733 | 1.157811e-49 | -8.615850e-47 |
| Msa0080250 | Msa1336040 | 0.805780 | 1.131319e-49 | -8.615850e-47 |
| Msa0080250 | Msa1356610 | 0.826538 | 2.568580e-54 | -8.615850e-47 |
| Msa0080250 | Msa1366550 | 0.811711 | 6.106235e-51 | -8.615850e-47 |
| Msa0080250 | Msa1385810 | 0.802903 | 4.499060e-49 | -8.615850e-47 |
| Msa0080250 | Msa1391720 | 0.802596 | 5.203511e-49 | -8.615850e-47 |
| Msa0080250 | Msa1393820 | 0.829204 | 5.867613e-55 | -8.615850e-47 |
| Msa0080250 | Msa1403560 | 0.826650 | 2.415218e-54 | -8.615850e-47 |
| Msa0080250 | Msa1420250 | 0.808652 | 2.787856e-50 | -8.615850e-47 |
| Msa0080250 | Msa1426910 | 0.815825 | 7.581910e-52 | -8.615850e-47 |
| Msa0080250 | Msa1443310 | 0.835769 | 1.383394e-56 | -8.615850e-47 |
| Msa0080250 | Msa1459910 | 0.818390 | 2.009752e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080250 | MtrunA17_Chr1g0192541 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1098 |
| Msa0080250 | MtrunA17_Chr7g0271871 | 88.722 | 532 | 60 | 0 | 1 | 532 | 1 | 532 | 0.0 | 987 |
| Msa0080250 | MtrunA17_Chr2g0294881 | 86.278 | 532 | 69 | 3 | 1 | 531 | 1 | 529 | 0.0 | 943 |
| Msa0080250 | MtrunA17_Chr4g0068051 | 73.655 | 539 | 123 | 6 | 1 | 531 | 1 | 528 | 0.0 | 791 |
| Msa0080250 | MtrunA17_Chr4g0074371 | 80.751 | 426 | 82 | 0 | 79 | 504 | 1 | 426 | 0.0 | 732 |
| Msa0080250 | MtrunA17_Chr4g0075701 | 73.363 | 443 | 114 | 3 | 70 | 511 | 3 | 442 | 0.0 | 669 |
| Msa0080250 | MtrunA17_Chr4g0075701 | 22.712 | 295 | 169 | 7 | 69 | 346 | 171 | 423 | 8.24e-11 | 64.3 |
| Msa0080250 | MtrunA17_Chr4g0075691 | 75.587 | 426 | 103 | 1 | 83 | 507 | 2 | 427 | 0.0 | 651 |
| Msa0080250 | MtrunA17_Chr8g0346871 | 73.821 | 424 | 110 | 1 | 110 | 533 | 15 | 437 | 0.0 | 641 |
| Msa0080250 | MtrunA17_Chr4g0074081 | 69.481 | 462 | 103 | 3 | 79 | 504 | 1 | 460 | 0.0 | 629 |
| Msa0080250 | MtrunA17_Chr1g0174791 | 75.000 | 300 | 72 | 3 | 208 | 504 | 1 | 300 | 2.95e-155 | 445 |
| Msa0080250 | MtrunA17_Chr1g0174791 | 26.047 | 215 | 145 | 6 | 108 | 314 | 30 | 238 | 9.27e-11 | 63.2 |
| Msa0080250 | MtrunA17_Chr7g0271821 | 45.389 | 553 | 245 | 13 | 1 | 499 | 1 | 550 | 4.54e-142 | 421 |
| Msa0080250 | MtrunA17_Chr7g0272761 | 45.473 | 497 | 231 | 12 | 14 | 496 | 15 | 485 | 2.70e-118 | 358 |
| Msa0080250 | MtrunA17_Chr7g0271831 | 48.687 | 419 | 190 | 9 | 85 | 499 | 7 | 404 | 5.60e-113 | 341 |
| Msa0080250 | MtrunA17_Chr4g0004921 | 62.774 | 274 | 52 | 4 | 261 | 532 | 1 | 226 | 5.98e-109 | 324 |
| Msa0080250 | MtrunA17_Chr4g0071961 | 77.027 | 148 | 34 | 0 | 364 | 511 | 2 | 149 | 3.96e-75 | 237 |
| Msa0080250 | MtrunA17_Chr4g0075651 | 78.723 | 141 | 30 | 0 | 366 | 506 | 8 | 148 | 2.12e-73 | 229 |
| Msa0080250 | MtrunA17_Chr1g0181541 | 29.231 | 520 | 319 | 14 | 14 | 499 | 10 | 514 | 3.89e-52 | 185 |
| Msa0080250 | MtrunA17_Chr4g0075601 | 60.284 | 141 | 43 | 1 | 364 | 491 | 1 | 141 | 6.41e-51 | 171 |
| Msa0080250 | MtrunA17_Chr4g0004931 | 59.722 | 144 | 44 | 1 | 110 | 253 | 11 | 140 | 4.59e-48 | 163 |
| Msa0080250 | MtrunA17_Chr4g0075621 | 69.307 | 101 | 31 | 0 | 79 | 179 | 1 | 101 | 3.53e-43 | 149 |
| Msa0080250 | MtrunA17_Chr4g0071971 | 73.077 | 104 | 27 | 1 | 263 | 365 | 10 | 113 | 7.59e-42 | 147 |
| Msa0080250 | MtrunA17_Chr4g0071981 | 65.854 | 82 | 24 | 1 | 83 | 160 | 2 | 83 | 7.62e-28 | 107 |
| Msa0080250 | MtrunA17_Chr4g0075641 | 43.537 | 147 | 28 | 2 | 276 | 367 | 2 | 148 | 7.45e-25 | 100 |
| Msa0080250 | MtrunA17_Chr4g0075631 | 82.353 | 51 | 9 | 0 | 219 | 269 | 1 | 51 | 5.06e-23 | 92.0 |
| Msa0080250 | MtrunA17_Chr4g0069541 | 66.667 | 60 | 20 | 0 | 322 | 381 | 55 | 114 | 2.50e-20 | 88.2 |
| Msa0080250 | MtrunA17_Chr1g0174801 | 86.667 | 30 | 4 | 0 | 135 | 164 | 40 | 69 | 1.10e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080250 | AT3G06720.1 | 82.836 | 536 | 84 | 6 | 1 | 532 | 1 | 532 | 0.0 | 897 |
| Msa0080250 | AT3G06720.2 | 82.836 | 536 | 84 | 6 | 1 | 532 | 1 | 532 | 0.0 | 897 |
| Msa0080250 | AT4G16143.2 | 82.463 | 536 | 87 | 2 | 1 | 531 | 1 | 534 | 0.0 | 894 |
| Msa0080250 | AT4G16143.1 | 82.463 | 536 | 87 | 2 | 1 | 531 | 1 | 534 | 0.0 | 894 |
| Msa0080250 | AT1G09270.2 | 74.677 | 541 | 123 | 5 | 1 | 531 | 1 | 537 | 0.0 | 797 |
| Msa0080250 | AT1G09270.1 | 74.677 | 541 | 123 | 5 | 1 | 531 | 1 | 537 | 0.0 | 797 |
| Msa0080250 | AT1G02690.1 | 70.718 | 543 | 141 | 5 | 1 | 531 | 1 | 537 | 0.0 | 785 |
| Msa0080250 | AT1G02690.2 | 70.588 | 544 | 141 | 6 | 1 | 531 | 1 | 538 | 0.0 | 781 |
| Msa0080250 | AT4G02150.1 | 70.795 | 541 | 137 | 5 | 1 | 531 | 1 | 530 | 0.0 | 773 |
| Msa0080250 | AT1G09270.3 | 78.947 | 456 | 91 | 3 | 79 | 531 | 2 | 455 | 0.0 | 716 |
| Msa0080250 | AT5G49310.1 | 65.868 | 501 | 164 | 3 | 1 | 501 | 1 | 494 | 0.0 | 655 |
| Msa0080250 | AT3G05720.1 | 64.300 | 493 | 157 | 4 | 13 | 497 | 9 | 490 | 0.0 | 620 |
| Msa0080250 | AT3G05720.2 | 64.300 | 493 | 157 | 4 | 13 | 497 | 9 | 490 | 0.0 | 620 |
| Msa0080250 | AT4G02150.2 | 71.463 | 417 | 102 | 3 | 1 | 408 | 1 | 409 | 0.0 | 610 |
| Msa0080250 | AT5G52000.1 | 54.762 | 420 | 177 | 6 | 79 | 497 | 14 | 421 | 1.40e-145 | 426 |
| Msa0080250 | AT5G49305.5 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.35e-86 | 271 |
| Msa0080250 | AT5G49305.3 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.35e-86 | 271 |
| Msa0080250 | AT5G49305.4 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.35e-86 | 271 |
| Msa0080250 | AT5G49305.1 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.35e-86 | 271 |
| Msa0080250 | AT5G49305.2 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.35e-86 | 271 |
| Msa0080250 | AT1G32880.1 | 61.224 | 147 | 52 | 3 | 363 | 507 | 40 | 183 | 9.98e-55 | 182 |
| Msa0080250 | AT5G03070.1 | 28.298 | 523 | 320 | 14 | 14 | 499 | 10 | 514 | 2.50e-47 | 172 |
Find 184 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTAACCATTCATTTA+TGG | 0.082234 | 1_2:+58513872 | None:intergenic |
| AAACTTTCATCGACGAAAAT+AGG | 0.156375 | 1_2:+58508402 | None:intergenic |
| CGGGGCTTTGGTTCCTCTTT+TGG | 0.163040 | 1_2:-58511982 | Msa0080250:CDS |
| TTTACGATTGTGGGTCTATT+TGG | 0.232502 | 1_2:-58508541 | Msa0080250:three_prime_UTR |
| GTGATCGAGGCCAATATATT+TGG | 0.282098 | 1_2:-58509601 | Msa0080250:CDS |
| CTTGGTTATATGTAATAGTT+TGG | 0.282901 | 1_2:-58508589 | Msa0080250:three_prime_UTR |
| TGAGGTTCCTTCTGTGCCTT+CGG | 0.302539 | 1_2:-58509040 | Msa0080250:CDS |
| CCCAGCTGTAATGTTTGATA+TGG | 0.317154 | 1_2:+58509748 | None:intergenic |
| CCTGCACTTCCTGCTCTTGC+TGG | 0.324162 | 1_2:-58511329 | Msa0080250:CDS |
| TCCTGTATGATGGGACAAGC+TGG | 0.327403 | 1_2:-58508820 | Msa0080250:three_prime_UTR |
| AAATAGGGACACTGGATATA+TGG | 0.330170 | 1_2:+58508418 | None:intergenic |
| TGTTCTCGGTCACGGGGCTT+TGG | 0.338208 | 1_2:-58511994 | Msa0080250:CDS |
| TGTTGCAGTTTGAGGCAGCC+TGG | 0.340818 | 1_2:-58512386 | Msa0080250:intron |
| TTGCAGGCTGTGTGGGCATT+AGG | 0.348382 | 1_2:-58512053 | Msa0080250:intron |
| GAGGTTCCTTCTGTGCCTTC+GGG | 0.355241 | 1_2:-58509039 | Msa0080250:CDS |
| GAGAACAAGATCACGACATC+TGG | 0.355494 | 1_2:+58512010 | None:intergenic |
| GTGTCGTTTCTGTGTCCAAC+AGG | 0.362455 | 1_2:-58508785 | Msa0080250:three_prime_UTR |
| GGACACTTTCAAACTTCTGC+AGG | 0.363703 | 1_2:-58511911 | Msa0080250:CDS |
| CCTCAGCATCATCAATCATC+TGG | 0.369585 | 1_2:+58509214 | None:intergenic |
| GTTGCGACGGACCTCGGTCC+TGG | 0.372521 | 1_2:+58513636 | None:intergenic |
| TGGACGATACGACATCGTTT+AGG | 0.372833 | 1_2:+58513669 | None:intergenic |
| CCAGGCGATGCTTCTCAATC+AGG | 0.373845 | 1_2:-58509081 | Msa0080250:CDS |
| ATTGGTAAATAGAGTGTTGC+TGG | 0.374330 | 1_2:-58508755 | Msa0080250:three_prime_UTR |
| TAATACACCCTTGACTTACT+AGG | 0.382527 | 1_2:+58509370 | None:intergenic |
| TGGAGACTATACTGCTCTAT+TGG | 0.384488 | 1_2:+58513725 | None:intergenic |
| TCGGTCCTGGAGTTTGCGTT+TGG | 0.385924 | 1_2:+58513649 | None:intergenic |
| GCATCAAGAAGGAAGCTTGC+TGG | 0.387204 | 1_2:-58509772 | Msa0080250:CDS |
| TGGGAATAAACAGCAGATTC+AGG | 0.391086 | 1_2:-58509729 | Msa0080250:intron |
| GTGATCTTGTTCTCGGTCAC+GGG | 0.391108 | 1_2:-58512001 | Msa0080250:CDS |
| ACGGCGACGGCGGCCTTCTT+CGG | 0.399895 | 1_2:+58513591 | None:intergenic |
| GTTGGAACATTTGCCAACTA+TGG | 0.400235 | 1_2:-58513243 | Msa0080250:CDS |
| TAGGATTGTGACAGTTTGTC+TGG | 0.404102 | 1_2:-58509313 | Msa0080250:CDS |
| GGAAGACTTTCCGCAGTTGC+AGG | 0.411485 | 1_2:-58512975 | Msa0080250:intron |
| AGATGTCGTGATCTTGTTCT+CGG | 0.411575 | 1_2:-58512008 | Msa0080250:CDS |
| CTCTAACGTCGTTGAGAAGA+AGG | 0.413914 | 1_2:-58513467 | Msa0080250:intron |
| CACCAGAGGACCAAATATAT+TGG | 0.421774 | 1_2:+58509591 | None:intergenic |
| AACTTTATATAATACAAAAT+AGG | 0.421972 | 1_2:+58508359 | None:intergenic |
| GGATTGGCTTGGGCAATGCT+TGG | 0.424796 | 1_2:-58508734 | Msa0080250:three_prime_UTR |
| GGCCAATATATTTGGTCCTC+TGG | 0.429004 | 1_2:-58509593 | Msa0080250:CDS |
| AACTTTCATCGACGAAAATA+GGG | 0.430049 | 1_2:+58508403 | None:intergenic |
| TTTCGAAAGCTGCTATCAAT+TGG | 0.433330 | 1_2:-58513167 | Msa0080250:intron |
| TGAAGATTCTTGAGACATAC+TGG | 0.434618 | 1_2:-58509131 | Msa0080250:CDS |
| ATAATGAATAACTGAACTCT+AGG | 0.436920 | 1_2:+58508446 | None:intergenic |
| CAATAGAAGCTCAACAAGTC+GGG | 0.443446 | 1_2:+58511193 | None:intergenic |
| TATCAAGAAAGAGGCTGCTT+GGG | 0.447132 | 1_2:-58509542 | Msa0080250:CDS |
| AGTAGATGTTCATGCTTCAA+TGG | 0.450475 | 1_2:-58508999 | Msa0080250:exon |
| GTCTGTATAACCTCCTCAAT+TGG | 0.451353 | 1_2:+58513034 | None:intergenic |
| CGTGATCTTGTTCTCGGTCA+CGG | 0.451391 | 1_2:-58512002 | Msa0080250:CDS |
| AAGTCTTGACTGATGCCTGC+TGG | 0.451595 | 1_2:-58511283 | Msa0080250:CDS |
| GTAGATGTTCATGCTTCAAT+GGG | 0.453724 | 1_2:-58508998 | Msa0080250:exon |
| TCTCTTCACGACGATTCTTA+CGG | 0.453848 | 1_2:+58513548 | None:intergenic |
| ATTCCTGCTCTTCGTACTGT+TGG | 0.456615 | 1_2:-58511036 | Msa0080250:CDS |
| CCAGCAAGAGCAGGAAGTGC+AGG | 0.456751 | 1_2:+58511329 | None:intergenic |
| TAGTGACGATGTCCGTGAAC+AGG | 0.458807 | 1_2:-58512268 | Msa0080250:intron |
| GTTGCAGTTTGAGGCAGCCT+GGG | 0.460182 | 1_2:-58512385 | Msa0080250:intron |
| AACACTCTATTTACCAATGT+TGG | 0.460273 | 1_2:+58508760 | None:intergenic |
| TAAATAGAGTGTTGCTGGAT+TGG | 0.460720 | 1_2:-58508750 | Msa0080250:three_prime_UTR |
| ATTAAAGTCCTCCTGTATGA+TGG | 0.461686 | 1_2:-58508830 | Msa0080250:three_prime_UTR |
| CATTTGCCAACTATGGTTGC+TGG | 0.462444 | 1_2:-58513236 | Msa0080250:CDS |
| GCTTTGACAAACATAGCTTC+TGG | 0.467363 | 1_2:-58512363 | Msa0080250:CDS |
| CCTGTATGATGGGACAAGCT+GGG | 0.468046 | 1_2:-58508819 | Msa0080250:three_prime_UTR |
| CAACACAGAGATTTATGAAA+AGG | 0.468157 | 1_2:-58509157 | Msa0080250:CDS |
| ATATCAAGAAAGAGGCTGCT+TGG | 0.477404 | 1_2:-58509543 | Msa0080250:CDS |
| CCCAGCTTGTCCCATCATAC+AGG | 0.477877 | 1_2:+58508819 | None:intergenic |
| GATTGATGATGCTGAGGGGT+TGG | 0.479588 | 1_2:-58509208 | Msa0080250:CDS |
| TTCTTATCTGTCCCGATCCT+AGG | 0.480160 | 1_2:-58509332 | Msa0080250:CDS |
| AGACAAACTGTCACAATCCT+AGG | 0.480993 | 1_2:+58509315 | None:intergenic |
| CCTGATTGAGAAGCATCGCC+TGG | 0.486344 | 1_2:+58509081 | None:intergenic |
| CGGAGAAGAGAAAGAGGCAG+TGG | 0.488800 | 1_2:+58513705 | None:intergenic |
| GTATCGGTTGCGACGGACCT+CGG | 0.489943 | 1_2:+58513630 | None:intergenic |
| ATTCGCAAACGAACCAGAAA+AGG | 0.491574 | 1_2:+58508957 | None:intergenic |
| ACCATATCAAACATTACAGC+TGG | 0.491638 | 1_2:-58509749 | Msa0080250:CDS |
| GCTATCTCAAATGCTACATC+TGG | 0.492465 | 1_2:-58509520 | Msa0080250:CDS |
| ATCGTCCAAACGCAAACTCC+AGG | 0.492966 | 1_2:-58513654 | Msa0080250:CDS |
| TTACCAATGTTGGACCCTGT+TGG | 0.495530 | 1_2:+58508770 | None:intergenic |
| ACCTGATCAAAAGGAGGCTG+TGG | 0.496155 | 1_2:+58511882 | None:intergenic |
| ATTTCTCAGCATAGAAAGCT+TGG | 0.497993 | 1_2:+58511941 | None:intergenic |
| CTATGCTGAGAAATGCTACC+TGG | 0.506227 | 1_2:-58511932 | Msa0080250:CDS |
| CACACACCAGCAACCATAGT+TGG | 0.509375 | 1_2:+58513230 | None:intergenic |
| GTTCCTTCTGTGCCTTCGGG+TGG | 0.510496 | 1_2:-58509036 | Msa0080250:CDS |
| GAGTGTTGCTGGATTGGCTT+GGG | 0.515886 | 1_2:-58508744 | Msa0080250:three_prime_UTR |
| ACAATAGAAGCTCAACAAGT+CGG | 0.519609 | 1_2:+58511192 | None:intergenic |
| CTTGAAAACATCTTGAAGGT+TGG | 0.523089 | 1_2:-58509285 | Msa0080250:CDS |
| AACTGTCACAATCCTAGGAT+CGG | 0.523984 | 1_2:+58509320 | None:intergenic |
| GGAATTAGCACTGAAGGAGA+TGG | 0.524492 | 1_2:+58511054 | None:intergenic |
| TCTCAACCATGGTGTCTTCA+CGG | 0.525122 | 1_2:+58513572 | None:intergenic |
| AAGATATGATAGTGCCCAGC+AGG | 0.525630 | 1_2:+58511268 | None:intergenic |
| GCGGCCTTCTTCGGCATCGA+CGG | 0.526344 | 1_2:+58513600 | None:intergenic |
| GTCGCCGTCGATGCCGAAGA+AGG | 0.528551 | 1_2:-58513604 | Msa0080250:CDS |
| CATCGACGGCGACCTTGTAT+CGG | 0.531230 | 1_2:+58513614 | None:intergenic |
| TCATTCAATTGTGCCAAAAG+AGG | 0.531241 | 1_2:+58511969 | None:intergenic |
| ATCTCAAATGCTACATCTGG+TGG | 0.531801 | 1_2:-58509517 | Msa0080250:CDS |
| ATTCAAGCTGTAATTGAAGC+TGG | 0.533221 | 1_2:-58511224 | Msa0080250:CDS |
| AGCTATGTTTGTCAAAGCCC+AGG | 0.533920 | 1_2:+58512368 | None:intergenic |
| TTAAAGTCCTCCTGTATGAT+GGG | 0.534537 | 1_2:-58508829 | Msa0080250:three_prime_UTR |
| GATCGACGGAGAAGAGAAAG+AGG | 0.538590 | 1_2:+58513699 | None:intergenic |
| AGGCCTTGAAAACATCTTGA+AGG | 0.539236 | 1_2:-58509289 | Msa0080250:CDS |
| TGGGCATTAGGAAATGTTGC+TGG | 0.539661 | 1_2:-58512041 | Msa0080250:CDS |
| GGTCCGTCGCAACCGATACA+AGG | 0.540085 | 1_2:-58513626 | Msa0080250:CDS |
| AGAACGTACTCCACCAATTG+AGG | 0.541142 | 1_2:-58513047 | Msa0080250:CDS |
| AGGAGTTAACCATAAATGAA+TGG | 0.541924 | 1_2:-58513881 | Msa0080250:five_prime_UTR |
| AGTCTTGACTGATGCCTGCT+GGG | 0.542032 | 1_2:-58511282 | Msa0080250:CDS |
| ACTGTCACAATCCTAGGATC+GGG | 0.542887 | 1_2:+58509321 | None:intergenic |
| GACACTTTCAAACTTCTGCA+GGG | 0.542937 | 1_2:-58511910 | Msa0080250:CDS |
| TGAGTTTGATATCAAGAAAG+AGG | 0.543652 | 1_2:-58509551 | Msa0080250:CDS |
| GATTCTTGAGACATACTGGT+TGG | 0.544779 | 1_2:-58509127 | Msa0080250:CDS |
| TGAATAAGACCAGCAAGAGC+AGG | 0.545161 | 1_2:+58511320 | None:intergenic |
| TCTCTGTGTTGTCATGACTC+TGG | 0.550839 | 1_2:+58509169 | None:intergenic |
| TCTTGAGACATACTGGTTGG+AGG | 0.551326 | 1_2:-58509124 | Msa0080250:CDS |
| ACTGTTGGAAACATTGTCAC+TGG | 0.554408 | 1_2:-58511021 | Msa0080250:CDS |
| CATCTTGAAGGTTGGAGAAG+CGG | 0.554732 | 1_2:-58509277 | Msa0080250:CDS |
| AAGTCAAATATACCTGTTCA+CGG | 0.556545 | 1_2:+58512256 | None:intergenic |
| GCAAAATGCCAGATGCTCGT+TGG | 0.556813 | 1_2:-58508519 | Msa0080250:three_prime_UTR |
| ATCTCATGGTGACAGATGTA+TGG | 0.557066 | 1_2:-58508703 | Msa0080250:three_prime_UTR |
| TTTCCAACAGTACGAAGAGC+AGG | 0.559463 | 1_2:+58511033 | None:intergenic |
| CTCAGCATCATCAATCATCT+GGG | 0.560931 | 1_2:+58509215 | None:intergenic |
| AAATGAATGAAACTAACGGT+AGG | 0.562334 | 1_2:+58513765 | None:intergenic |
| ATTGTGACAGTTTGTCTGGA+AGG | 0.563823 | 1_2:-58509309 | Msa0080250:CDS |
| TGTATAACCTCCTCAATTGG+TGG | 0.567337 | 1_2:+58513037 | None:intergenic |
| GACAGGTACCTAGTAAGTCA+AGG | 0.569304 | 1_2:-58509378 | Msa0080250:intron |
| CTAAGGTGGTAATTGACCAT+GGG | 0.574999 | 1_2:-58512326 | Msa0080250:CDS |
| GCAGAAGTTTGAAAGTGTCC+AGG | 0.579750 | 1_2:+58511914 | None:intergenic |
| TGGAACATCTGAAAACACTA+AGG | 0.579810 | 1_2:-58512343 | Msa0080250:CDS |
| AGAGCAGGAATTAGCACTGA+AGG | 0.580502 | 1_2:+58511048 | None:intergenic |
| AGAACAAGATCACGACATCT+GGG | 0.580552 | 1_2:+58512011 | None:intergenic |
| TGGAGATGATTTGCAAACTC+AGG | 0.581537 | 1_2:-58511001 | Msa0080250:intron |
| AAAGAACAAACCTGCAACTG+CGG | 0.583325 | 1_2:+58512965 | None:intergenic |
| CCATGGTGTCTTCACGGCGA+CGG | 0.585962 | 1_2:+58513578 | None:intergenic |
| GAATTAGCACTGAAGGAGAT+GGG | 0.587950 | 1_2:+58511055 | None:intergenic |
| ACGATACGACATCGTTTAGG+AGG | 0.588773 | 1_2:+58513672 | None:intergenic |
| CTGTATGATGGGACAAGCTG+GGG | 0.589464 | 1_2:-58508818 | Msa0080250:three_prime_UTR |
| ATCGACGAAAATAGGGACAC+TGG | 0.590862 | 1_2:+58508410 | None:intergenic |
| AGAGTGTTGCTGGATTGGCT+TGG | 0.590986 | 1_2:-58508745 | Msa0080250:three_prime_UTR |
| ATTGAGGAGGTTATACAGAC+TGG | 0.591254 | 1_2:-58513031 | Msa0080250:CDS |
| AATCCACCCGAAGGCACAGA+AGG | 0.592098 | 1_2:+58509033 | None:intergenic |
| GAGAAGTCTAGTATTGTCTA+CGG | 0.592208 | 1_2:+58508661 | None:intergenic |
| GCACTATCATATCTTTCTGA+TGG | 0.593235 | 1_2:-58511260 | Msa0080250:CDS |
| TAATGAATAACTGAACTCTA+GGG | 0.595201 | 1_2:+58508447 | None:intergenic |
| AATGAATGAAACTAACGGTA+GGG | 0.599046 | 1_2:+58513766 | None:intergenic |
| TCTCAATCAGGATTCAACTT+CGG | 0.600258 | 1_2:-58509069 | Msa0080250:CDS |
| GAAGACGAGACTATGCCTCC+AGG | 0.602017 | 1_2:-58509099 | Msa0080250:CDS |
| TGTCCAACAGGGTCCAACAT+TGG | 0.603072 | 1_2:-58508773 | Msa0080250:three_prime_UTR |
| ATTATATAAAGTTTCACGCA+GGG | 0.606159 | 1_2:-58508349 | Msa0080250:three_prime_UTR |
| ACGTTAGAGTGAAGAGCGGA+AGG | 0.610168 | 1_2:+58513481 | None:intergenic |
| CAACTATGGTTGCTGGTGTG+TGG | 0.615148 | 1_2:-58513229 | Msa0080250:CDS |
| CTGTGTTGTCATGACTCTGG+AGG | 0.617202 | 1_2:+58509172 | None:intergenic |
| ACTAAGGTGGTAATTGACCA+TGG | 0.617924 | 1_2:-58512327 | Msa0080250:CDS |
| TGATCTTGTTCTCGGTCACG+GGG | 0.618284 | 1_2:-58512000 | Msa0080250:CDS |
| TTATAAGAAAAGCATCAAGA+AGG | 0.621627 | 1_2:-58509783 | Msa0080250:CDS |
| CGACCTTGTATCGGTTGCGA+CGG | 0.627945 | 1_2:+58513623 | None:intergenic |
| TATTTAACAGGCTGTGATCG+AGG | 0.629779 | 1_2:-58509614 | Msa0080250:intron |
| CCATATCAAACATTACAGCT+GGG | 0.630827 | 1_2:-58509748 | Msa0080250:CDS |
| ACACTTTCAAACTTCTGCAG+GGG | 0.631402 | 1_2:-58511909 | Msa0080250:CDS |
| TGGTGTCTTCACGGCGACGG+CGG | 0.632012 | 1_2:+58513581 | None:intergenic |
| ATAGGTTATCATCAATCATG+AGG | 0.634624 | 1_2:-58509840 | Msa0080250:intron |
| TATTATATAAAGTTTCACGC+AGG | 0.637214 | 1_2:-58508350 | Msa0080250:three_prime_UTR |
| TGATAAATGAATGAAACTAA+CGG | 0.637262 | 1_2:+58513761 | None:intergenic |
| CATCGTCACTAGAAGAAGCA+AGG | 0.638488 | 1_2:+58512280 | None:intergenic |
| ACAGGTACCTAGTAAGTCAA+GGG | 0.638546 | 1_2:-58509377 | Msa0080250:intron |
| CCAGATGATTGATGATGCTG+AGG | 0.638583 | 1_2:-58509214 | Msa0080250:CDS |
| TGTCGTTTCTGTGTCCAACA+GGG | 0.646081 | 1_2:-58508784 | Msa0080250:three_prime_UTR |
| AACATCTGAAAACACTAAGG+TGG | 0.654726 | 1_2:-58512340 | Msa0080250:CDS |
| AGCTTGTCCCATCATACAGG+AGG | 0.659269 | 1_2:+58508822 | None:intergenic |
| CAGATGATTGATGATGCTGA+GGG | 0.661033 | 1_2:-58509213 | Msa0080250:CDS |
| ATTCAACTTCGGTAGCGCTG+AGG | 0.666056 | 1_2:-58509058 | Msa0080250:CDS |
| GTTTAGGAGGAAGTGATCGA+CGG | 0.666953 | 1_2:+58513685 | None:intergenic |
| GTCAACAGATTATATAGACA+AGG | 0.667483 | 1_2:+58509812 | None:intergenic |
| CCGTCGCCGTGAAGACACCA+TGG | 0.674855 | 1_2:-58513578 | Msa0080250:CDS |
| AATAGAAGCTCAACAAGTCG+GGG | 0.676710 | 1_2:+58511194 | None:intergenic |
| ACAGATAAGAAGATCACACA+AGG | 0.680401 | 1_2:+58509344 | None:intergenic |
| ACGTACTCCACCAATTGAGG+AGG | 0.687347 | 1_2:-58513044 | Msa0080250:CDS |
| AGAGCGGAAGGAATCTGCTG+AGG | 0.690264 | 1_2:+58513493 | None:intergenic |
| GATTGAGAAGCATCGCCTGG+AGG | 0.697893 | 1_2:+58509084 | None:intergenic |
| TCATGGTGACAGATGTATGG+TGG | 0.702524 | 1_2:-58508700 | Msa0080250:three_prime_UTR |
| ATTCTTACGGATCTCAACCA+TGG | 0.707053 | 1_2:+58513561 | None:intergenic |
| TAAGGTGGTAATTGACCATG+GGG | 0.708388 | 1_2:-58512325 | Msa0080250:CDS |
| AAACGCAAACTCCAGGACCG+AGG | 0.710372 | 1_2:-58513647 | Msa0080250:CDS |
| TTGAAGTTAAATCCACCCGA+AGG | 0.711716 | 1_2:+58509024 | None:intergenic |
| AATGCATATGATAGAGAACA+CGG | 0.712688 | 1_2:+58508313 | None:intergenic |
| AAAAGGCTAAATATAAGACA+CGG | 0.732928 | 1_2:+58508974 | None:intergenic |
| TAGATGTTCATGCTTCAATG+GGG | 0.738164 | 1_2:-58508997 | Msa0080250:three_prime_UTR |
| AACGACGTTAGAGTGAAGAG+CGG | 0.743526 | 1_2:+58513477 | None:intergenic |
| AGATGATTGATGATGCTGAG+GGG | 0.754975 | 1_2:-58509212 | Msa0080250:CDS |
| CAGATAAGAAGATCACACAA+GGG | 0.772619 | 1_2:+58509345 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTATAAAAAAAAA+AGG | + | chr1_2:58511132-58511151 | None:intergenic | 0.0% |
| !! | TTTAAGAATAAAAAAAAACA+AGG | - | chr1_2:58508334-58508353 | Msa0080250:three_prime_UTR | 10.0% |
| !! | ATTAATGAAGTAATTAATTT+AGG | - | chr1_2:58509145-58509164 | Msa0080250:CDS | 10.0% |
| !!! | AAGTTTAAAATTCAAAAAAT+AGG | + | chr1_2:58509652-58509671 | None:intergenic | 10.0% |
| !!! | ATTTTTTATTTATTATCTGT+AGG | - | chr1_2:58510769-58510788 | Msa0080250:intron | 10.0% |
| !! | AACTTTATATAATACAAAAT+AGG | + | chr1_2:58513890-58513909 | None:intergenic | 10.0% |
| !!! | TTTTTAGATTTGTTTGAATT+AGG | - | chr1_2:58508928-58508947 | Msa0080250:intron | 15.0% |
| !! | TAAAATTCAAAAAATAGGTT+TGG | + | chr1_2:58509647-58509666 | None:intergenic | 15.0% |
| !! | TAAATAAAAAATTGTACTAG+TGG | + | chr1_2:58510761-58510780 | None:intergenic | 15.0% |
| !!! | TACATTCTACTATTTTTTAT+AGG | - | chr1_2:58510889-58510908 | Msa0080250:intron | 15.0% |
| !! | AAACAAAAAGAAAATATAAG+AGG | + | chr1_2:58511814-58511833 | None:intergenic | 15.0% |
| !! | AAATGATTATTGTAACATAA+CGG | + | chr1_2:58512040-58512059 | None:intergenic | 15.0% |
| !!! | ATTTCTTTCTGAATATTTTT+TGG | - | chr1_2:58512245-58512264 | Msa0080250:intron | 15.0% |
| !! | ATCAATTAACCATTCATTTA+TGG | + | chr1_2:58508377-58508396 | None:intergenic | 20.0% |
| !! | TGATAAATGAATGAAACTAA+CGG | + | chr1_2:58508488-58508507 | None:intergenic | 20.0% |
| !! | AAAGTGATTTAGGAATAATA+AGG | + | chr1_2:58508832-58508851 | None:intergenic | 20.0% |
| !!! | TACAGGAATTTTACAAAATT+CGG | + | chr1_2:58509768-58509787 | None:intergenic | 20.0% |
| !!! | TTTTCAAGAAAAGATATCAT+GGG | + | chr1_2:58510146-58510165 | None:intergenic | 20.0% |
| !!! | TATTTTTATACCTGATCAAA+AGG | + | chr1_2:58510376-58510395 | None:intergenic | 20.0% |
| !! | ATGTAATACTCTAATCTATA+GGG | + | chr1_2:58510625-58510644 | None:intergenic | 20.0% |
| !! | TATGTAATACTCTAATCTAT+AGG | + | chr1_2:58510626-58510645 | None:intergenic | 20.0% |
| !! | TTTATCCACAAAAAAAAGAA+AGG | + | chr1_2:58511369-58511388 | None:intergenic | 20.0% |
| !!! | TCTATTTTTCTTTTCACTAT+TGG | - | chr1_2:58511947-58511966 | Msa0080250:CDS | 20.0% |
| !! | AGATCTTATCATTTATACTA+CGG | - | chr1_2:58512302-58512321 | Msa0080250:CDS | 20.0% |
| !! | AATTTCTATTGTTTGTTTGT+TGG | - | chr1_2:58512361-58512380 | Msa0080250:CDS | 20.0% |
| !!! | GATGCTTTTCTTATAATTAT+TGG | + | chr1_2:58512459-58512478 | None:intergenic | 20.0% |
| !! | CTGTTAAATATTAGGAAATT+AGG | + | chr1_2:58512622-58512641 | None:intergenic | 20.0% |
| !! | CTAATTTCCTAATATTTAAC+AGG | - | chr1_2:58512620-58512639 | Msa0080250:intron | 20.0% |
| !! | GATAAAAATATAGGCAATAA+TGG | - | chr1_2:58512991-58513010 | Msa0080250:CDS | 20.0% |
| ! | GAAAAAGAAATCACAAATCT+TGG | - | chr1_2:58508414-58508433 | Msa0080250:three_prime_UTR | 25.0% |
| !! | AGATTTGTTTGAATTAGGTT+AGG | - | chr1_2:58508933-58508952 | Msa0080250:intron | 25.0% |
| !! | GATTTGTTTGAATTAGGTTA+GGG | - | chr1_2:58508934-58508953 | Msa0080250:intron | 25.0% |
| !! | ACAGGAATTTTACAAAATTC+GGG | + | chr1_2:58509767-58509786 | None:intergenic | 25.0% |
| !!! | CTTTAAAATGCAGAAACTTT+GGG | - | chr1_2:58510035-58510054 | Msa0080250:intron | 25.0% |
| !!! | GTTTTCAAGAAAAGATATCA+TGG | + | chr1_2:58510147-58510166 | None:intergenic | 25.0% |
| ! | ATCTTATGGATAACATTGTT+TGG | - | chr1_2:58510669-58510688 | Msa0080250:intron | 25.0% |
| ! | GAAAGAAAATACAGAAGAAA+AGG | + | chr1_2:58510695-58510714 | None:intergenic | 25.0% |
| ! | TAAATCAAATATTGAGCAGA+TGG | + | chr1_2:58510824-58510843 | None:intergenic | 25.0% |
| ! | GATCCAAAAATACAACATAA+TGG | + | chr1_2:58510868-58510887 | None:intergenic | 25.0% |
| ! | ATAAAAGAAATACTGTTAGC+AGG | - | chr1_2:58511384-58511403 | Msa0080250:intron | 25.0% |
| ! | TAAAAGAAATACTGTTAGCA+GGG | - | chr1_2:58511385-58511404 | Msa0080250:intron | 25.0% |
| ! | ACCATTTGCTTCTAATAAAA+GGG | + | chr1_2:58511888-58511907 | None:intergenic | 25.0% |
| ! | GTTTGCTTATTAGATTACTA+AGG | - | chr1_2:58512064-58512083 | Msa0080250:intron | 25.0% |
| ! | TTAAAGAAAGGTTTGACATA+TGG | + | chr1_2:58512169-58512188 | None:intergenic | 25.0% |
| ! | TGTCAAACCTTTCTTTAAAT+TGG | - | chr1_2:58512171-58512190 | Msa0080250:intron | 25.0% |
| !!! | TATTCAAATATCGATTTTCC+TGG | - | chr1_2:58512202-58512221 | Msa0080250:intron | 25.0% |
| !!! | TTATAAGAAAAGCATCAAGA+AGG | - | chr1_2:58512463-58512482 | Msa0080250:intron | 25.0% |
| ! | ATAATATTATTAACCCTCCA+GGG | + | chr1_2:58512799-58512818 | None:intergenic | 25.0% |
| ! | AAAAGGCTAAATATAAGACA+CGG | + | chr1_2:58513275-58513294 | None:intergenic | 25.0% |
| !! | AACTTTATCAAGAATTTTGC+AGG | - | chr1_2:58513375-58513394 | Msa0080250:intron | 25.0% |
| !!! | TCAGTATCATGATTTTTTCT+TGG | - | chr1_2:58513639-58513658 | Msa0080250:CDS | 25.0% |
| ! | CTTGGTTATATGTAATAGTT+TGG | - | chr1_2:58513657-58513676 | Msa0080250:CDS | 25.0% |
| !! | ACTTAAGTTTTTACGATTGT+GGG | - | chr1_2:58513696-58513715 | Msa0080250:five_prime_UTR | 25.0% |
| ! | AAAAATTCATAGGTACCAAT+GGG | + | chr1_2:58513761-58513780 | None:intergenic | 25.0% |
| ! | AAAAAATTCATAGGTACCAA+TGG | + | chr1_2:58513762-58513781 | None:intergenic | 25.0% |
| !!! | TTGGTACCTATGAATTTTTT+TGG | - | chr1_2:58513762-58513781 | Msa0080250:five_prime_UTR | 25.0% |
| ! | TAATGAATAACTGAACTCTA+GGG | + | chr1_2:58513802-58513821 | None:intergenic | 25.0% |
| ! | ATAATGAATAACTGAACTCT+AGG | + | chr1_2:58513803-58513822 | None:intergenic | 25.0% |
| ! | TATTATATAAAGTTTCACGC+AGG | - | chr1_2:58513896-58513915 | Msa0080250:five_prime_UTR | 25.0% |
| ! | ATTATATAAAGTTTCACGCA+GGG | - | chr1_2:58513897-58513916 | Msa0080250:five_prime_UTR | 25.0% |
| AGGAGTTAACCATAAATGAA+TGG | - | chr1_2:58508365-58508384 | Msa0080250:three_prime_UTR | 30.0% | |
| AATGAATGAAACTAACGGTA+GGG | + | chr1_2:58508483-58508502 | None:intergenic | 30.0% | |
| AAATGAATGAAACTAACGGT+AGG | + | chr1_2:58508484-58508503 | None:intergenic | 30.0% | |
| ! | AGCTTTGATCAAAGTGATTT+AGG | + | chr1_2:58508842-58508861 | None:intergenic | 30.0% |
| ! | GATTGACTTTGATATTTGTG+TGG | - | chr1_2:58509175-58509194 | Msa0080250:CDS | 30.0% |
| TACGTAATGCTATCTAGTAT+GGG | + | chr1_2:58509405-58509424 | None:intergenic | 30.0% | |
| ATAACCATAAATTTCACTCG+CGG | + | chr1_2:58509520-58509539 | None:intergenic | 30.0% | |
| ! | TTTTACAAAATTCGGGGTAT+GGG | + | chr1_2:58509760-58509779 | None:intergenic | 30.0% |
| ! | ATTTTACAAAATTCGGGGTA+TGG | + | chr1_2:58509761-58509780 | None:intergenic | 30.0% |
| ! | CAGGAATTTTACAAAATTCG+GGG | + | chr1_2:58509766-58509785 | None:intergenic | 30.0% |
| AAGTCAAATATACCTGTTCA+CGG | + | chr1_2:58509993-58510012 | None:intergenic | 30.0% | |
| ! | CCAAAGTTTCTGCATTTTAA+AGG | + | chr1_2:58510037-58510056 | None:intergenic | 30.0% |
| !! | CCTTTAAAATGCAGAAACTT+TGG | - | chr1_2:58510034-58510053 | Msa0080250:intron | 30.0% |
| ATTTCATACACACACAAAAG+AGG | + | chr1_2:58510113-58510132 | None:intergenic | 30.0% | |
| !!! | TTCTGTGATTTTTGTTTTGC+AGG | - | chr1_2:58510177-58510196 | Msa0080250:intron | 30.0% |
| ! | TTTTATACCTGATCAAAAGG+AGG | + | chr1_2:58510373-58510392 | None:intergenic | 30.0% |
| !!! | TTAACTGTTACTTTTCTGTC+TGG | - | chr1_2:58510447-58510466 | Msa0080250:intron | 30.0% |
| ! | GTAATATTTTACCTTGTCAG+AGG | + | chr1_2:58510482-58510501 | None:intergenic | 30.0% |
| CTTATCGAGTCAAAAGAATA+TGG | - | chr1_2:58510592-58510611 | Msa0080250:intron | 30.0% | |
| ACAGAATACTTCTGATCTTA+TGG | - | chr1_2:58510655-58510674 | Msa0080250:intron | 30.0% | |
| CATACTTTGCAATTTCATGA+CGG | + | chr1_2:58510726-58510745 | None:intergenic | 30.0% | |
| GAAATTGCAAAGTATGCAAT+TGG | - | chr1_2:58510730-58510749 | Msa0080250:intron | 30.0% | |
| ! | CTGCCATTATGTTGTATTTT+TGG | - | chr1_2:58510862-58510881 | Msa0080250:intron | 30.0% |
| TTCGTAACAAATAAAACCAC+AGG | + | chr1_2:58511331-58511350 | None:intergenic | 30.0% | |
| CACAAAAAAAAGAAAGGCAA+AGG | + | chr1_2:58511363-58511382 | None:intergenic | 30.0% | |
| !!! | CTTTGCCTTTCTTTTTTTTG+TGG | - | chr1_2:58511361-58511380 | Msa0080250:intron | 30.0% |
| AAAAGAAATACTGTTAGCAG+GGG | - | chr1_2:58511386-58511405 | Msa0080250:intron | 30.0% | |
| AAAATAAGGCTTAGAGTGAT+AGG | - | chr1_2:58511674-58511693 | Msa0080250:intron | 30.0% | |
| AAATAAGGCTTAGAGTGATA+GGG | - | chr1_2:58511675-58511694 | Msa0080250:intron | 30.0% | |
| !!! | ATGCCAACAGTTTTTTTCAA+CGG | + | chr1_2:58511775-58511794 | None:intergenic | 30.0% |
| !! | TAAAAGGGTGCTTAGATATA+GGG | + | chr1_2:58511873-58511892 | None:intergenic | 30.0% |
| !! | ATAAAAGGGTGCTTAGATAT+AGG | + | chr1_2:58511874-58511893 | None:intergenic | 30.0% |
| ! | ACCCTTTTATTAGAAGCAAA+TGG | - | chr1_2:58511884-58511903 | Msa0080250:CDS | 30.0% |
| CACCATTTGCTTCTAATAAA+AGG | + | chr1_2:58511889-58511908 | None:intergenic | 30.0% | |
| GATTATTGTAACATAACGGT+TGG | + | chr1_2:58512036-58512055 | None:intergenic | 30.0% | |
| TCAAGCAATGACATTGAAAT+AGG | + | chr1_2:58512109-58512128 | None:intergenic | 30.0% | |
| CAATAATGCAAAGAAAGGTT+TGG | + | chr1_2:58512140-58512159 | None:intergenic | 30.0% | |
| TCAAGCAATAATGCAAAGAA+AGG | + | chr1_2:58512145-58512164 | None:intergenic | 30.0% | |
| CCTCAATCCAATTTAAAGAA+AGG | + | chr1_2:58512181-58512200 | None:intergenic | 30.0% | |
| CCTTTCTTTAAATTGGATTG+AGG | - | chr1_2:58512178-58512197 | Msa0080250:intron | 30.0% | |
| TATTCAGAAAGAAATAGAGC+TGG | + | chr1_2:58512240-58512259 | None:intergenic | 30.0% | |
| ! | ATGATTGATGATAACCTATG+GGG | + | chr1_2:58512405-58512424 | None:intergenic | 30.0% |
| ! | CATGATTGATGATAACCTAT+GGG | + | chr1_2:58512406-58512425 | None:intergenic | 30.0% |
| ! | TCATGATTGATGATAACCTA+TGG | + | chr1_2:58512407-58512426 | None:intergenic | 30.0% |
| ATAGGTTATCATCAATCATG+AGG | - | chr1_2:58512406-58512425 | Msa0080250:intron | 30.0% | |
| GTCAACAGATTATATAGACA+AGG | + | chr1_2:58512437-58512456 | None:intergenic | 30.0% | |
| ATCACAGCCTGTTAAATATT+AGG | + | chr1_2:58512630-58512649 | None:intergenic | 30.0% | |
| TGAGTTTGATATCAAGAAAG+AGG | - | chr1_2:58512695-58512714 | Msa0080250:intron | 30.0% | |
| ! | ATGCATTTTCAATATTTCCC+TGG | - | chr1_2:58512779-58512798 | Msa0080250:intron | 30.0% |
| ! | ATTTTCAATATTTCCCTGGA+GGG | - | chr1_2:58512783-58512802 | Msa0080250:intron | 30.0% |
| CATAATATTATTAACCCTCC+AGG | + | chr1_2:58512800-58512819 | None:intergenic | 30.0% | |
| CTGGAGGGTTAATAATATTA+TGG | - | chr1_2:58512798-58512817 | Msa0080250:intron | 30.0% | |
| AATTATTCTCCATGTTTGAC+AGG | - | chr1_2:58512851-58512870 | Msa0080250:intron | 30.0% | |
| CAACACAGAGATTTATGAAA+AGG | - | chr1_2:58513089-58513108 | Msa0080250:intron | 30.0% | |
| !! | GTCTTATATTTAGCCTTTTC+TGG | - | chr1_2:58513276-58513295 | Msa0080250:intron | 30.0% |
| AACACTCTATTTACCAATGT+TGG | + | chr1_2:58513489-58513508 | None:intergenic | 30.0% | |
| ! | CACTTAAGTTTTTACGATTG+TGG | - | chr1_2:58513695-58513714 | Msa0080250:five_prime_UTR | 30.0% |
| CATCGACCAAAAAAATTCAT+AGG | + | chr1_2:58513771-58513790 | None:intergenic | 30.0% | |
| AACTTTCATCGACGAAAATA+GGG | + | chr1_2:58513846-58513865 | None:intergenic | 30.0% | |
| AAACTTTCATCGACGAAAAT+AGG | + | chr1_2:58513847-58513866 | None:intergenic | 30.0% | |
| AAAAAAACAAGGCAACGATG+AGG | - | chr1_2:58508345-58508364 | Msa0080250:three_prime_UTR | 35.0% | |
| ! | TTCTATGTTGTTGTTGCAGT+TGG | - | chr1_2:58508985-58509004 | Msa0080250:three_prime_UTR | 35.0% |
| TTTCGAAAGCTGCTATCAAT+TGG | - | chr1_2:58509079-58509098 | Msa0080250:CDS | 35.0% | |
| AAAGCTGCTATCAATTGGTT+AGG | - | chr1_2:58509084-58509103 | Msa0080250:CDS | 35.0% | |
| ! | TTTTGTCGAGTTTCTGATGA+GGG | - | chr1_2:58509250-58509269 | Msa0080250:CDS | 35.0% |
| GTACGTAATGCTATCTAGTA+TGG | + | chr1_2:58509406-58509425 | None:intergenic | 35.0% | |
| TTTACACGTATGATGCTTGT+CGG | - | chr1_2:58509435-58509454 | Msa0080250:intron | 35.0% | |
| GAAACCATAAATTTCACTCG+CGG | + | chr1_2:58509486-58509505 | None:intergenic | 35.0% | |
| TGTATCAGCAACATCAAACA+TGG | + | chr1_2:58509817-58509836 | None:intergenic | 35.0% | |
| TGGAACATCTGAAAACACTA+AGG | - | chr1_2:58509903-58509922 | Msa0080250:intron | 35.0% | |
| AACATCTGAAAACACTAAGG+TGG | - | chr1_2:58509906-58509925 | Msa0080250:intron | 35.0% | |
| CAAGGAGCTTCACAAAAATT+GGG | + | chr1_2:58509951-58509970 | None:intergenic | 35.0% | |
| !! | TGCATTTTAAAGGCAGATGA+AGG | + | chr1_2:58510027-58510046 | None:intergenic | 35.0% |
| TCATTCAATTGTGCCAAAAG+AGG | + | chr1_2:58510280-58510299 | None:intergenic | 35.0% | |
| ATTTCTCAGCATAGAAAGCT+TGG | + | chr1_2:58510308-58510327 | None:intergenic | 35.0% | |
| AATCGAATAACTTAGTCCTG+TGG | - | chr1_2:58510416-58510435 | Msa0080250:intron | 35.0% | |
| ACAGTTAAGAAAAATGCCAC+AGG | + | chr1_2:58510435-58510454 | None:intergenic | 35.0% | |
| TAACAGCTAGATGAAATCGA+AGG | - | chr1_2:58510536-58510555 | Msa0080250:intron | 35.0% | |
| AACAGCTAGATGAAATCGAA+GGG | - | chr1_2:58510537-58510556 | Msa0080250:intron | 35.0% | |
| GCACTATCATATCTTTCTGA+TGG | - | chr1_2:58510986-58511005 | Msa0080250:intron | 35.0% | |
| ATTCAAGCTGTAATTGAAGC+TGG | - | chr1_2:58511022-58511041 | Msa0080250:CDS | 35.0% | |
| ACAATAGAAGCTCAACAAGT+CGG | + | chr1_2:58511057-58511076 | None:intergenic | 35.0% | |
| AGTACCTCACATCTCAAATT+TGG | - | chr1_2:58511078-58511097 | Msa0080250:intron | 35.0% | |
| TGAATGTTCTACACTTGTTC+AGG | - | chr1_2:58511166-58511185 | Msa0080250:intron | 35.0% | |
| TGTGCATAACAAAACAGCAA+CGG | + | chr1_2:58511277-58511296 | None:intergenic | 35.0% | |
| !! | TAAGGTGTATGAGTTGGTTT+AGG | - | chr1_2:58511412-58511431 | Msa0080250:intron | 35.0% |
| !! | AAGGTGTATGAGTTGGTTTA+GGG | - | chr1_2:58511413-58511432 | Msa0080250:intron | 35.0% |
| ACATAAGGCTTAGAGTGATA+TGG | - | chr1_2:58511443-58511462 | Msa0080250:intron | 35.0% | |
| TTAGAGTGATATGGAGGTAA+TGG | - | chr1_2:58511452-58511471 | Msa0080250:intron | 35.0% | |
| TAGAGTGATATGGAGGTAAT+GGG | - | chr1_2:58511453-58511472 | Msa0080250:intron | 35.0% | |
| ! | GTTGAGTGTGATTTGTAAGT+GGG | + | chr1_2:58511486-58511505 | None:intergenic | 35.0% |
| GCACACTAACTACTAACATA+AGG | - | chr1_2:58511519-58511538 | Msa0080250:intron | 35.0% | |
| ! | TTTTCAACGGCAAATGTTAG+TGG | + | chr1_2:58511762-58511781 | None:intergenic | 35.0% |
| TTGCCGTTGAAAAAAACTGT+TGG | - | chr1_2:58511769-58511788 | Msa0080250:intron | 35.0% | |
| AGCAAATGGTGCTTACATAT+AGG | - | chr1_2:58511898-58511917 | Msa0080250:CDS | 35.0% | |
| GCAAATGGTGCTTACATATA+GGG | - | chr1_2:58511899-58511918 | Msa0080250:CDS | 35.0% | |
| AGATGCATAACATGAACAGA+AGG | + | chr1_2:58512001-58512020 | None:intergenic | 35.0% | |
| !! | AGTAGAAACTTGTTGAGTTG+AGG | + | chr1_2:58512281-58512300 | None:intergenic | 35.0% |
| !! | TTTGTTTGTTGGTTTGAACC+TGG | - | chr1_2:58512372-58512391 | Msa0080250:CDS | 35.0% |
| ACCATATCAAACATTACAGC+TGG | - | chr1_2:58512497-58512516 | Msa0080250:intron | 35.0% | |
| CCATATCAAACATTACAGCT+GGG | - | chr1_2:58512498-58512517 | Msa0080250:intron | 35.0% | |
| ! | CATTTTCAATATTTCCCTGG+AGG | - | chr1_2:58512782-58512801 | Msa0080250:intron | 35.0% |
| TAATACACCCTTGACTTACT+AGG | + | chr1_2:58512879-58512898 | None:intergenic | 35.0% | |
| CAGATAAGAAGATCACACAA+GGG | + | chr1_2:58512904-58512923 | None:intergenic | 35.0% | |
| ACAGATAAGAAGATCACACA+AGG | + | chr1_2:58512905-58512924 | None:intergenic | 35.0% | |
| ! | CAACCTTCAAGATGTTTTCA+AGG | + | chr1_2:58512963-58512982 | None:intergenic | 35.0% |
| CTTGAAAACATCTTGAAGGT+TGG | - | chr1_2:58512961-58512980 | Msa0080250:intron | 35.0% | |
| GGAGAAGCGGATAAAAATAT+AGG | - | chr1_2:58512982-58513001 | Msa0080250:CDS | 35.0% | |
| TGAAGATTCTTGAGACATAC+TGG | - | chr1_2:58513115-58513134 | Msa0080250:intron | 35.0% | |
| TCTCAATCAGGATTCAACTT+CGG | - | chr1_2:58513177-58513196 | Msa0080250:CDS | 35.0% | |
| AGTAGATGTTCATGCTTCAA+TGG | - | chr1_2:58513247-58513266 | Msa0080250:intron | 35.0% | |
| GTAGATGTTCATGCTTCAAT+GGG | - | chr1_2:58513248-58513267 | Msa0080250:intron | 35.0% | |
| TAGATGTTCATGCTTCAATG+GGG | - | chr1_2:58513249-58513268 | Msa0080250:intron | 35.0% | |
| !! | AATTTTGCAGGAGTTTTGTC+TGG | - | chr1_2:58513387-58513406 | Msa0080250:intron | 35.0% |
| ATTAAAGTCCTCCTGTATGA+TGG | - | chr1_2:58513416-58513435 | Msa0080250:intron | 35.0% | |
| TTAAAGTCCTCCTGTATGAT+GGG | - | chr1_2:58513417-58513436 | Msa0080250:intron | 35.0% | |
| !! | ATTGGTAAATAGAGTGTTGC+TGG | - | chr1_2:58513491-58513510 | Msa0080250:CDS | 35.0% |
| !! | TAAATAGAGTGTTGCTGGAT+TGG | - | chr1_2:58513496-58513515 | Msa0080250:CDS | 35.0% |
| !! | GCTTGGTTTTTCATATCTCA+TGG | - | chr1_2:58513529-58513548 | Msa0080250:CDS | 35.0% |
| !!! | TGTATGGTGGCTTGATTTTT+TGG | - | chr1_2:58513559-58513578 | Msa0080250:CDS | 35.0% |
| GAGAAGTCTAGTATTGTCTA+CGG | + | chr1_2:58513588-58513607 | None:intergenic | 35.0% | |
| TTTACGATTGTGGGTCTATT+TGG | - | chr1_2:58513705-58513724 | Msa0080250:five_prime_UTR | 35.0% | |
| AAATAGGGACACTGGATATA+TGG | + | chr1_2:58513831-58513850 | None:intergenic | 35.0% | |
| ! | GTAGGGTTTGTGTTTTGTAC+TGG | + | chr1_2:58508466-58508485 | None:intergenic | 40.0% |
| TGGAGACTATACTGCTCTAT+TGG | + | chr1_2:58508524-58508543 | None:intergenic | 40.0% | |
| ATTCTTACGGATCTCAACCA+TGG | + | chr1_2:58508688-58508707 | None:intergenic | 40.0% | |
| TCTCTTCACGACGATTCTTA+CGG | + | chr1_2:58508701-58508720 | None:intergenic | 40.0% | |
| GTTGGAACATTTGCCAACTA+TGG | - | chr1_2:58509003-58509022 | Msa0080250:exon | 40.0% | |
| TGTATAACCTCCTCAATTGG+TGG | + | chr1_2:58509212-58509231 | None:intergenic | 40.0% | |
| GTCTGTATAACCTCCTCAAT+TGG | + | chr1_2:58509215-58509234 | None:intergenic | 40.0% | |
| ATTGAGGAGGTTATACAGAC+TGG | - | chr1_2:58509215-58509234 | Msa0080250:CDS | 40.0% | |
| ! | GTTTTGTCGAGTTTCTGATG+AGG | - | chr1_2:58509249-58509268 | Msa0080250:CDS | 40.0% |
| AAAGAACAAACCTGCAACTG+CGG | + | chr1_2:58509284-58509303 | None:intergenic | 40.0% | |
| CTAGATAGCATTACGTACCA+TGG | - | chr1_2:58509408-58509427 | Msa0080250:intron | 40.0% | |
| !! | TCATACGTGTAAAGGTACCA+TGG | + | chr1_2:58509428-58509447 | None:intergenic | 40.0% |
| GACAAGCATCATACGTGTAA+AGG | + | chr1_2:58509436-58509455 | None:intergenic | 40.0% | |
| GATGCATACTTGCATAGGTA+TGG | + | chr1_2:58509795-58509814 | None:intergenic | 40.0% | |
| ACATGGATGCATACTTGCAT+AGG | + | chr1_2:58509800-58509819 | None:intergenic | 40.0% | |
| GCTTTGACAAACATAGCTTC+TGG | - | chr1_2:58509883-58509902 | Msa0080250:intron | 40.0% | |
| ACTAAGGTGGTAATTGACCA+TGG | - | chr1_2:58509919-58509938 | Msa0080250:intron | 40.0% | |
| CTAAGGTGGTAATTGACCAT+GGG | - | chr1_2:58509920-58509939 | Msa0080250:intron | 40.0% | |
| TAAGGTGGTAATTGACCATG+GGG | - | chr1_2:58509921-58509940 | Msa0080250:intron | 40.0% | |
| GCAAGGAGCTTCACAAAAAT+TGG | + | chr1_2:58509952-58509971 | None:intergenic | 40.0% | |
| !!! | TTTTTGTTTTGCAGGCTGTG+TGG | - | chr1_2:58510185-58510204 | Msa0080250:intron | 40.0% |
| !!! | TTTTGTTTTGCAGGCTGTGT+GGG | - | chr1_2:58510186-58510205 | Msa0080250:intron | 40.0% |
| AGAACAAGATCACGACATCT+GGG | + | chr1_2:58510238-58510257 | None:intergenic | 40.0% | |
| AGATGTCGTGATCTTGTTCT+CGG | - | chr1_2:58510238-58510257 | Msa0080250:intron | 40.0% | |
| GACACTTTCAAACTTCTGCA+GGG | - | chr1_2:58510336-58510355 | Msa0080250:intron | 40.0% | |
| ACACTTTCAAACTTCTGCAG+GGG | - | chr1_2:58510337-58510356 | Msa0080250:intron | 40.0% | |
| TTTCATCTAGCTGTTACAGC+AGG | + | chr1_2:58510532-58510551 | None:intergenic | 40.0% | |
| ACAGCTAGATGAAATCGAAG+GGG | - | chr1_2:58510538-58510557 | Msa0080250:intron | 40.0% | |
| GTTGTGTATGTGAACCTGAA+GGG | - | chr1_2:58510791-58510810 | Msa0080250:intron | 40.0% | |
| AATAGAAGCTCAACAAGTCG+GGG | + | chr1_2:58511055-58511074 | None:intergenic | 40.0% | |
| CAATAGAAGCTCAACAAGTC+GGG | + | chr1_2:58511056-58511075 | None:intergenic | 40.0% | |
| ! | ACAGCCAAATTTGAGATGTG+AGG | + | chr1_2:58511085-58511104 | None:intergenic | 40.0% |
| ! | GAATTAGCACTGAAGGAGAT+GGG | + | chr1_2:58511194-58511213 | None:intergenic | 40.0% |
| ACTGTTGGAAACATTGTCAC+TGG | - | chr1_2:58511225-58511244 | Msa0080250:CDS | 40.0% | |
| ! | TGGAGATGATTTGCAAACTC+AGG | - | chr1_2:58511245-58511264 | Msa0080250:CDS | 40.0% |
| GGAAAATCAGTGAGATCGAA+AGG | + | chr1_2:58511310-58511329 | None:intergenic | 40.0% | |
| TACTGTTAGCAGGGGTTATA+AGG | - | chr1_2:58511394-58511413 | Msa0080250:intron | 40.0% | |
| GGGTTATAAGGTGTATGAGT+TGG | - | chr1_2:58511406-58511425 | Msa0080250:intron | 40.0% | |
| !! | AGGTGTATGAGTTGGTTTAG+GGG | - | chr1_2:58511414-58511433 | Msa0080250:intron | 40.0% |
| TAAGGCTTAGAGTGATATGG+AGG | - | chr1_2:58511446-58511465 | Msa0080250:intron | 40.0% | |
| ! | GGTTGAGTGTGATTTGTAAG+TGG | + | chr1_2:58511487-58511506 | None:intergenic | 40.0% |
| AGTTAGTGTGCTCTGTTAGT+GGG | + | chr1_2:58511510-58511529 | None:intergenic | 40.0% | |
| TAGTTAGTGTGCTCTGTTAG+TGG | + | chr1_2:58511511-58511530 | None:intergenic | 40.0% | |
| GAATCGAACTTGAAACCTTG+AGG | + | chr1_2:58511607-58511626 | None:intergenic | 40.0% | |
| TGCTTACATATAGGGACAGA+GGG | - | chr1_2:58511907-58511926 | Msa0080250:CDS | 40.0% | |
| CCCAGCTGTAATGTTTGATA+TGG | + | chr1_2:58512501-58512520 | None:intergenic | 40.0% | |
| TGGGAATAAACAGCAGATTC+AGG | - | chr1_2:58512517-58512536 | Msa0080250:intron | 40.0% | |
| TATTTAACAGGCTGTGATCG+AGG | - | chr1_2:58512632-58512651 | Msa0080250:intron | 40.0% | |
| GTGATCGAGGCCAATATATT+TGG | - | chr1_2:58512645-58512664 | Msa0080250:intron | 40.0% | |
| CACCAGAGGACCAAATATAT+TGG | + | chr1_2:58512658-58512677 | None:intergenic | 40.0% | |
| ATATCAAGAAAGAGGCTGCT+TGG | - | chr1_2:58512703-58512722 | Msa0080250:intron | 40.0% | |
| TATCAAGAAAGAGGCTGCTT+GGG | - | chr1_2:58512704-58512723 | Msa0080250:intron | 40.0% | |
| GCTATCTCAAATGCTACATC+TGG | - | chr1_2:58512726-58512745 | Msa0080250:intron | 40.0% | |
| ATCTCAAATGCTACATCTGG+TGG | - | chr1_2:58512729-58512748 | Msa0080250:intron | 40.0% | |
| TACTAGGTACCTGTCAAACA+TGG | + | chr1_2:58512863-58512882 | None:intergenic | 40.0% | |
| ACAGGTACCTAGTAAGTCAA+GGG | - | chr1_2:58512869-58512888 | Msa0080250:intron | 40.0% | |
| AACTGTCACAATCCTAGGAT+CGG | + | chr1_2:58512929-58512948 | None:intergenic | 40.0% | |
| AGACAAACTGTCACAATCCT+AGG | + | chr1_2:58512934-58512953 | None:intergenic | 40.0% | |
| TAGGATTGTGACAGTTTGTC+TGG | - | chr1_2:58512933-58512952 | Msa0080250:intron | 40.0% | |
| ATTGTGACAGTTTGTCTGGA+AGG | - | chr1_2:58512937-58512956 | Msa0080250:intron | 40.0% | |
| AGGCCTTGAAAACATCTTGA+AGG | - | chr1_2:58512957-58512976 | Msa0080250:intron | 40.0% | |
| CTCAGCATCATCAATCATCT+GGG | + | chr1_2:58513034-58513053 | None:intergenic | 40.0% | |
| !! | CAGATGATTGATGATGCTGA+GGG | - | chr1_2:58513033-58513052 | Msa0080250:CDS | 40.0% |
| !! | AGATGATTGATGATGCTGAG+GGG | - | chr1_2:58513034-58513053 | Msa0080250:CDS | 40.0% |
| GATTCTTGAGACATACTGGT+TGG | - | chr1_2:58513119-58513138 | Msa0080250:intron | 40.0% | |
| TTGAAGTTAAATCCACCCGA+AGG | + | chr1_2:58513225-58513244 | None:intergenic | 40.0% | |
| ATTCGCAAACGAACCAGAAA+AGG | + | chr1_2:58513292-58513311 | None:intergenic | 40.0% | |
| ATCTCATGGTGACAGATGTA+TGG | - | chr1_2:58513543-58513562 | Msa0080250:CDS | 40.0% | |
| TAAAAACTCCAACGAGCATC+TGG | + | chr1_2:58513738-58513757 | None:intergenic | 40.0% | |
| ! | TCGTTGGAGTTTTTACCCAT+TGG | - | chr1_2:58513743-58513762 | Msa0080250:five_prime_UTR | 40.0% |
| GTTTAGGAGGAAGTGATCGA+CGG | + | chr1_2:58508564-58508583 | None:intergenic | 45.0% | |
| ACGATACGACATCGTTTAGG+AGG | + | chr1_2:58508577-58508596 | None:intergenic | 45.0% | |
| TGGACGATACGACATCGTTT+AGG | + | chr1_2:58508580-58508599 | None:intergenic | 45.0% | |
| TCTCAACCATGGTGTCTTCA+CGG | + | chr1_2:58508677-58508696 | None:intergenic | 45.0% | |
| TTGCTCAAAAAGAGACGCGA+AGG | - | chr1_2:58508723-58508742 | Msa0080250:three_prime_UTR | 45.0% | |
| AACGACGTTAGAGTGAAGAG+CGG | + | chr1_2:58508772-58508791 | None:intergenic | 45.0% | |
| CTCTAACGTCGTTGAGAAGA+AGG | - | chr1_2:58508779-58508798 | Msa0080250:three_prime_UTR | 45.0% | |
| CATTTGCCAACTATGGTTGC+TGG | - | chr1_2:58509010-58509029 | Msa0080250:exon | 45.0% | |
| AGAACGTACTCCACCAATTG+AGG | - | chr1_2:58509199-58509218 | Msa0080250:CDS | 45.0% | |
| TCTGCCGCGAGTGAAATTTA+TGG | - | chr1_2:58509479-58509498 | Msa0080250:intron | 45.0% | |
| TCTGCCGCGAGTGAAATTTA+TGG | - | chr1_2:58509479-58509498 | Msa0080250:intron | 45.0% | |
| CATACTTGCATAGGTATGGC+GGG | + | chr1_2:58509791-58509810 | None:intergenic | 45.0% | |
| GCATACTTGCATAGGTATGG+CGG | + | chr1_2:58509792-58509811 | None:intergenic | 45.0% | |
| GTACTGTGTGTTGCAGTTTG+AGG | - | chr1_2:58509852-58509871 | Msa0080250:intron | 45.0% | |
| AGCTATGTTTGTCAAAGCCC+AGG | + | chr1_2:58509881-58509900 | None:intergenic | 45.0% | |
| CATCGTCACTAGAAGAAGCA+AGG | + | chr1_2:58509969-58509988 | None:intergenic | 45.0% | |
| TGGGCATTAGGAAATGTTGC+TGG | - | chr1_2:58510205-58510224 | Msa0080250:intron | 45.0% | |
| GAGAACAAGATCACGACATC+TGG | + | chr1_2:58510239-58510258 | None:intergenic | 45.0% | |
| CTATGCTGAGAAATGCTACC+TGG | - | chr1_2:58510314-58510333 | Msa0080250:intron | 45.0% | |
| !! | GCAGAAGTTTGAAAGTGTCC+AGG | + | chr1_2:58510335-58510354 | None:intergenic | 45.0% |
| GGACACTTTCAAACTTCTGC+AGG | - | chr1_2:58510335-58510354 | Msa0080250:intron | 45.0% | |
| CAGCTAGATGAAATCGAAGG+GGG | - | chr1_2:58510539-58510558 | Msa0080250:intron | 45.0% | |
| GGTTGTGTATGTGAACCTGA+AGG | - | chr1_2:58510790-58510809 | Msa0080250:intron | 45.0% | |
| TGAATAAGACCAGCAAGAGC+AGG | + | chr1_2:58510929-58510948 | None:intergenic | 45.0% | |
| ! | AAGATATGATAGTGCCCAGC+AGG | + | chr1_2:58510981-58511000 | None:intergenic | 45.0% |
| ! | GGAATTAGCACTGAAGGAGA+TGG | + | chr1_2:58511195-58511214 | None:intergenic | 45.0% |
| ! | AGAGCAGGAATTAGCACTGA+AGG | + | chr1_2:58511201-58511220 | None:intergenic | 45.0% |
| ATTCCTGCTCTTCGTACTGT+TGG | - | chr1_2:58511210-58511229 | Msa0080250:CDS | 45.0% | |
| TTTCCAACAGTACGAAGAGC+AGG | + | chr1_2:58511216-58511235 | None:intergenic | 45.0% | |
| !!! | CGATCTCACTGATTTTCCTG+TGG | - | chr1_2:58511312-58511331 | Msa0080250:CDS | 45.0% |
| !! | GGTGTATGAGTTGGTTTAGG+GGG | - | chr1_2:58511415-58511434 | Msa0080250:intron | 45.0% |
| !! | GTGTATGAGTTGGTTTAGGG+GGG | - | chr1_2:58511416-58511435 | Msa0080250:intron | 45.0% |
| GTTTAGGGGGGAGAAACATA+AGG | - | chr1_2:58511428-58511447 | Msa0080250:intron | 45.0% | |
| TTAGTGTGCTCTGTTAGTGG+GGG | + | chr1_2:58511508-58511527 | None:intergenic | 45.0% | |
| GTTAGTGTGCTCTGTTAGTG+GGG | + | chr1_2:58511509-58511528 | None:intergenic | 45.0% | |
| AAGGCTTAGAGTAACCCTCT+TGG | - | chr1_2:58511538-58511557 | Msa0080250:intron | 45.0% | |
| AGGCTTAGAGTAACCCTCTT+GGG | - | chr1_2:58511539-58511558 | Msa0080250:intron | 45.0% | |
| TTAGAGTAACCCTCTTGGGT+TGG | - | chr1_2:58511543-58511562 | Msa0080250:intron | 45.0% | |
| !! | ATGGTATTGGCTTGGGATCT+GGG | - | chr1_2:58511570-58511589 | Msa0080250:intron | 45.0% |
| TCGAACTTGAAACCTTGAGG+AGG | + | chr1_2:58511604-58511623 | None:intergenic | 45.0% | |
| CTAACTTAGCCCACCCAAAT+TGG | + | chr1_2:58511638-58511657 | None:intergenic | 45.0% | |
| TAAGGCTTAGAGTGATAGGG+AGG | - | chr1_2:58511678-58511697 | Msa0080250:intron | 45.0% | |
| TTAGAGTGATAGGGAGGTCA+TGG | - | chr1_2:58511684-58511703 | Msa0080250:intron | 45.0% | |
| GTTAGTGTGCTCTGTTAGTG+GGG | + | chr1_2:58511509-58511528 | None:intergenic | 45.0% | |
| GGTTAGTGTGCTCTGTTAGT+GGG | + | chr1_2:58511741-58511760 | None:intergenic | 45.0% | |
| TGGTTAGTGTGCTCTGTTAG+TGG | + | chr1_2:58511742-58511761 | None:intergenic | 45.0% | |
| TGCTTAGATATAGGGACGGA+GGG | + | chr1_2:58511865-58511884 | None:intergenic | 45.0% | |
| ! | AGGGTGCTTAGATATAGGGA+CGG | + | chr1_2:58511869-58511888 | None:intergenic | 45.0% |
| GTGCTTACATATAGGGACAG+AGG | - | chr1_2:58511906-58511925 | Msa0080250:CDS | 45.0% | |
| AGCTGGTCATCTCAAAATCC+AGG | + | chr1_2:58512223-58512242 | None:intergenic | 45.0% | |
| TGATGATAACCTATGGGGCA+AGG | + | chr1_2:58512400-58512419 | None:intergenic | 45.0% | |
| GGCCAATATATTTGGTCCTC+TGG | - | chr1_2:58512653-58512672 | Msa0080250:intron | 45.0% | |
| !!! | TTTTGAAGCAGACTCACCAG+AGG | + | chr1_2:58512672-58512691 | None:intergenic | 45.0% |
| GACAGGTACCTAGTAAGTCA+AGG | - | chr1_2:58512868-58512887 | Msa0080250:intron | 45.0% | |
| TTCTTATCTGTCCCGATCCT+AGG | - | chr1_2:58512914-58512933 | Msa0080250:intron | 45.0% | |
| ACTGTCACAATCCTAGGATC+GGG | + | chr1_2:58512928-58512947 | None:intergenic | 45.0% | |
| CATCTTGAAGGTTGGAGAAG+CGG | - | chr1_2:58512969-58512988 | Msa0080250:intron | 45.0% | |
| CCTCAGCATCATCAATCATC+TGG | + | chr1_2:58513035-58513054 | None:intergenic | 45.0% | |
| !! | CCAGATGATTGATGATGCTG+AGG | - | chr1_2:58513032-58513051 | Msa0080250:CDS | 45.0% |
| TCTCTGTGTTGTCATGACTC+TGG | + | chr1_2:58513080-58513099 | None:intergenic | 45.0% | |
| ! | TCTTGAGACATACTGGTTGG+AGG | - | chr1_2:58513122-58513141 | Msa0080250:intron | 45.0% |
| ! | CTGGTTCGTTTGCGAATTTC+TGG | - | chr1_2:58513295-58513314 | Msa0080250:intron | 45.0% |
| ! | TGTCGTTTCTGTGTCCAACA+GGG | - | chr1_2:58513462-58513481 | Msa0080250:intron | 45.0% |
| TTACCAATGTTGGACCCTGT+TGG | + | chr1_2:58513479-58513498 | None:intergenic | 45.0% | |
| TCATGGTGACAGATGTATGG+TGG | - | chr1_2:58513546-58513565 | Msa0080250:CDS | 45.0% | |
| ATCGACGAAAATAGGGACAC+TGG | + | chr1_2:58513839-58513858 | None:intergenic | 45.0% | |
| !!! | TATTATTATTTTCTAAATAT+TGG | - | chr1_2:58510080-58510099 | Msa0080250:intron | 5.0% |
| !!! | ATTATTATTTTCTAAATATT+GGG | - | chr1_2:58510081-58510100 | Msa0080250:intron | 5.0% |
| !! | TCTTAAAAAAAAATAAAATA+AGG | - | chr1_2:58511660-58511679 | Msa0080250:intron | 5.0% |
| GATCGACGGAGAAGAGAAAG+AGG | + | chr1_2:58508550-58508569 | None:intergenic | 50.0% | |
| ATCGTCCAAACGCAAACTCC+AGG | - | chr1_2:58508592-58508611 | Msa0080250:three_prime_UTR | 50.0% | |
| ACGTTAGAGTGAAGAGCGGA+AGG | + | chr1_2:58508768-58508787 | None:intergenic | 50.0% | |
| CACACACCAGCAACCATAGT+TGG | + | chr1_2:58509019-58509038 | None:intergenic | 50.0% | |
| CAACTATGGTTGCTGGTGTG+TGG | - | chr1_2:58509017-58509036 | Msa0080250:CDS | 50.0% | |
| ACGTACTCCACCAATTGAGG+AGG | - | chr1_2:58509202-58509221 | Msa0080250:CDS | 50.0% | |
| CAAAAATTGGGACAGCCCCA+TGG | + | chr1_2:58509939-58509958 | None:intergenic | 50.0% | |
| TAGTGACGATGTCCGTGAAC+AGG | - | chr1_2:58509978-58509997 | Msa0080250:intron | 50.0% | |
| CGTGATCTTGTTCTCGGTCA+CGG | - | chr1_2:58510244-58510263 | Msa0080250:intron | 50.0% | |
| GTGATCTTGTTCTCGGTCAC+GGG | - | chr1_2:58510245-58510264 | Msa0080250:intron | 50.0% | |
| TGATCTTGTTCTCGGTCACG+GGG | - | chr1_2:58510246-58510265 | Msa0080250:intron | 50.0% | |
| ACCTGATCAAAAGGAGGCTG+TGG | + | chr1_2:58510367-58510386 | None:intergenic | 50.0% | |
| GGTAATGCACTCCTCTGACA+AGG | - | chr1_2:58510468-58510487 | Msa0080250:intron | 50.0% | |
| GTGTATGTGAACCTGAAGGG+TGG | - | chr1_2:58510794-58510813 | Msa0080250:intron | 50.0% | |
| CAGATGGATAACCACCCTTC+AGG | + | chr1_2:58510808-58510827 | None:intergenic | 50.0% | |
| AAGTCTTGACTGATGCCTGC+TGG | - | chr1_2:58510963-58510982 | Msa0080250:intron | 50.0% | |
| AGTCTTGACTGATGCCTGCT+GGG | - | chr1_2:58510964-58510983 | Msa0080250:intron | 50.0% | |
| !! | TTGGGTTGGCCTGATGGTAT+TGG | - | chr1_2:58511557-58511576 | Msa0080250:intron | 50.0% |
| !! | TTGGCCTGATGGTATTGGCT+TGG | - | chr1_2:58511562-58511581 | Msa0080250:intron | 50.0% |
| !! | TGGCCTGATGGTATTGGCTT+GGG | - | chr1_2:58511563-58511582 | Msa0080250:intron | 50.0% |
| GATCCCAAGCCAATACCATC+AGG | + | chr1_2:58511569-58511588 | None:intergenic | 50.0% | |
| !! | GATGGTATTGGCTTGGGATC+TGG | - | chr1_2:58511569-58511588 | Msa0080250:intron | 50.0% |
| !! | TGGTATTGGCTTGGGATCTG+GGG | - | chr1_2:58511571-58511590 | Msa0080250:intron | 50.0% |
| GATTCCCCCAGTGCCAATTT+GGG | - | chr1_2:58511622-58511641 | Msa0080250:intron | 50.0% | |
| ! | GACGGAGGGAGTATATCTGA+AGG | + | chr1_2:58511851-58511870 | None:intergenic | 50.0% |
| GTGCTTAGATATAGGGACGG+AGG | + | chr1_2:58511866-58511885 | None:intergenic | 50.0% | |
| GCATCAAGAAGGAAGCTTGC+TGG | - | chr1_2:58512474-58512493 | Msa0080250:intron | 50.0% | |
| !! | GATTGATGATGCTGAGGGGT+TGG | - | chr1_2:58513038-58513057 | Msa0080250:CDS | 50.0% |
| CTGTGTTGTCATGACTCTGG+AGG | + | chr1_2:58513077-58513096 | None:intergenic | 50.0% | |
| ATTCAACTTCGGTAGCGCTG+AGG | - | chr1_2:58513188-58513207 | Msa0080250:CDS | 50.0% | |
| TGAGGTTCCTTCTGTGCCTT+CGG | - | chr1_2:58513206-58513225 | Msa0080250:CDS | 50.0% | |
| AGCTTGTCCCATCATACAGG+AGG | + | chr1_2:58513427-58513446 | None:intergenic | 50.0% | |
| ! | TCCTGTATGATGGGACAAGC+TGG | - | chr1_2:58513426-58513445 | Msa0080250:intron | 50.0% |
| ! | CCTGTATGATGGGACAAGCT+GGG | - | chr1_2:58513427-58513446 | Msa0080250:intron | 50.0% |
| ! | CTGTATGATGGGACAAGCTG+GGG | - | chr1_2:58513428-58513447 | Msa0080250:intron | 50.0% |
| !! | GTGTCGTTTCTGTGTCCAAC+AGG | - | chr1_2:58513461-58513480 | Msa0080250:intron | 50.0% |
| TGTCCAACAGGGTCCAACAT+TGG | - | chr1_2:58513473-58513492 | Msa0080250:CDS | 50.0% | |
| !! | AGAGTGTTGCTGGATTGGCT+TGG | - | chr1_2:58513501-58513520 | Msa0080250:CDS | 50.0% |
| !! | GAGTGTTGCTGGATTGGCTT+GGG | - | chr1_2:58513502-58513521 | Msa0080250:CDS | 50.0% |
| GCAAAATGCCAGATGCTCGT+TGG | - | chr1_2:58513727-58513746 | Msa0080250:five_prime_UTR | 50.0% | |
| CGGAGAAGAGAAAGAGGCAG+TGG | + | chr1_2:58508544-58508563 | None:intergenic | 55.0% | |
| TCGGTCCTGGAGTTTGCGTT+TGG | + | chr1_2:58508600-58508619 | None:intergenic | 55.0% | |
| AAACGCAAACTCCAGGACCG+AGG | - | chr1_2:58508599-58508618 | Msa0080250:three_prime_UTR | 55.0% | |
| !! | CGACCTTGTATCGGTTGCGA+CGG | + | chr1_2:58508626-58508645 | None:intergenic | 55.0% |
| CATCGACGGCGACCTTGTAT+CGG | + | chr1_2:58508635-58508654 | None:intergenic | 55.0% | |
| AGAGCGGAAGGAATCTGCTG+AGG | + | chr1_2:58508756-58508775 | None:intergenic | 55.0% | |
| GGAAGACTTTCCGCAGTTGC+AGG | - | chr1_2:58509271-58509290 | Msa0080250:CDS | 55.0% | |
| !! | TGCATAGGTATGGCGGGTAC+AGG | + | chr1_2:58509785-58509804 | None:intergenic | 55.0% |
| ! | TGTTGCAGTTTGAGGCAGCC+TGG | - | chr1_2:58509860-58509879 | Msa0080250:intron | 55.0% |
| ! | GTTGCAGTTTGAGGCAGCCT+GGG | - | chr1_2:58509861-58509880 | Msa0080250:intron | 55.0% |
| TTGCAGGCTGTGTGGGCATT+AGG | - | chr1_2:58510193-58510212 | Msa0080250:intron | 55.0% | |
| !! | CGGGGCTTTGGTTCCTCTTT+TGG | - | chr1_2:58510264-58510283 | Msa0080250:intron | 55.0% |
| ! | GCCACAGCCTCCTTTTGATC+AGG | - | chr1_2:58510363-58510382 | Msa0080250:intron | 55.0% |
| ACCATCAGGCCAACCCAAGA+GGG | + | chr1_2:58511555-58511574 | None:intergenic | 55.0% | |
| TACCATCAGGCCAACCCAAG+AGG | + | chr1_2:58511556-58511575 | None:intergenic | 55.0% | |
| !! | GGTATTGGCTTGGGATCTGG+GGG | - | chr1_2:58511572-58511591 | Msa0080250:intron | 55.0% |
| CGATTCCCCCAGTGCCAATT+TGG | - | chr1_2:58511621-58511640 | Msa0080250:intron | 55.0% | |
| AGCCCACCCAAATTGGCACT+GGG | + | chr1_2:58511631-58511650 | None:intergenic | 55.0% | |
| TAGCCCACCCAAATTGGCAC+TGG | + | chr1_2:58511632-58511651 | None:intergenic | 55.0% | |
| GAAGACGAGACTATGCCTCC+AGG | - | chr1_2:58513147-58513166 | Msa0080250:intron | 55.0% | |
| !! | GATTGAGAAGCATCGCCTGG+AGG | + | chr1_2:58513165-58513184 | None:intergenic | 55.0% |
| !! | CCTGATTGAGAAGCATCGCC+TGG | + | chr1_2:58513168-58513187 | None:intergenic | 55.0% |
| CCAGGCGATGCTTCTCAATC+AGG | - | chr1_2:58513165-58513184 | Msa0080250:intron | 55.0% | |
| GAGGTTCCTTCTGTGCCTTC+GGG | - | chr1_2:58513207-58513226 | Msa0080250:CDS | 55.0% | |
| ! | AATCCACCCGAAGGCACAGA+AGG | + | chr1_2:58513216-58513235 | None:intergenic | 55.0% |
| CCCAGCTTGTCCCATCATAC+AGG | + | chr1_2:58513430-58513449 | None:intergenic | 55.0% | |
| !! | GGATTGGCTTGGGCAATGCT+TGG | - | chr1_2:58513512-58513531 | Msa0080250:CDS | 55.0% |
| !! | GTATCGGTTGCGACGGACCT+CGG | + | chr1_2:58508619-58508638 | None:intergenic | 60.0% |
| GGTCCGTCGCAACCGATACA+AGG | - | chr1_2:58508620-58508639 | Msa0080250:three_prime_UTR | 60.0% | |
| CCATGGTGTCTTCACGGCGA+CGG | + | chr1_2:58508671-58508690 | None:intergenic | 60.0% | |
| TGTTCTCGGTCACGGGGCTT+TGG | - | chr1_2:58510252-58510271 | Msa0080250:intron | 60.0% | |
| ! | CCAGCAAGAGCAGGAAGTGC+AGG | + | chr1_2:58510920-58510939 | None:intergenic | 60.0% |
| CCTGCACTTCCTGCTCTTGC+TGG | - | chr1_2:58510917-58510936 | Msa0080250:intron | 60.0% | |
| !! | ACCCTCTTGGGTTGGCCTGA+TGG | - | chr1_2:58511551-58511570 | Msa0080250:intron | 60.0% |
| ! | TGGGGGTATGCTCCTCCTCA+AGG | - | chr1_2:58511589-58511608 | Msa0080250:intron | 60.0% |
| TCCCCCAGTGCCAATTTGGG+TGG | - | chr1_2:58511625-58511644 | Msa0080250:intron | 60.0% | |
| ! | CCCACCCAAATTGGCACTGG+GGG | + | chr1_2:58511629-58511648 | None:intergenic | 60.0% |
| CCCCCAGTGCCAATTTGGGT+GGG | - | chr1_2:58511626-58511645 | Msa0080250:intron | 60.0% | |
| GCCCACCCAAATTGGCACTG+GGG | + | chr1_2:58511630-58511649 | None:intergenic | 60.0% | |
| AACCTGGTGCCTTGCCCCAT+AGG | - | chr1_2:58512388-58512407 | Msa0080250:intron | 60.0% | |
| ! | AACCTATGGGGCAAGGCACC+AGG | + | chr1_2:58512393-58512412 | None:intergenic | 60.0% |
| GTTCCTTCTGTGCCTTCGGG+TGG | - | chr1_2:58513210-58513229 | Msa0080250:CDS | 60.0% | |
| GTCGCCGTCGATGCCGAAGA+AGG | - | chr1_2:58508642-58508661 | Msa0080250:three_prime_UTR | 65.0% | |
| ! | GCGGCCTTCTTCGGCATCGA+CGG | + | chr1_2:58508649-58508668 | None:intergenic | 65.0% |
| TGGTGTCTTCACGGCGACGG+CGG | + | chr1_2:58508668-58508687 | None:intergenic | 65.0% | |
| CCGTCGCCGTGAAGACACCA+TGG | - | chr1_2:58508668-58508687 | Msa0080250:three_prime_UTR | 65.0% | |
| GTTGCGACGGACCTCGGTCC+TGG | + | chr1_2:58508613-58508632 | None:intergenic | 70.0% | |
| ACGGCGACGGCGGCCTTCTT+CGG | + | chr1_2:58508658-58508677 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 58508319 | 58513949 | 58508319 | ID=Msa0080250;Name=Msa0080250 |
| chr1_2 | mRNA | 58508319 | 58513949 | 58508319 | ID=Msa0080250-mRNA-1;Parent=Msa0080250;Name=Msa0080250-mRNA-1;_AED=0.08;_eAED=0.08;_QI=266|1|1|1|0.9|0.81|11|599|533 |
| chr1_2 | exon | 58508319 | 58508871 | 58508319 | ID=Msa0080250-mRNA-1:exon:18797;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58508971 | 58509395 | 58508971 | ID=Msa0080250-mRNA-1:exon:18796;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58509499 | 58509626 | 58509499 | ID=Msa0080250-mRNA-1:exon:18795;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58509730 | 58509858 | 58509730 | ID=Msa0080250-mRNA-1:exon:18794;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58511002 | 58511080 | 58511002 | ID=Msa0080250-mRNA-1:exon:18793;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58511194 | 58511357 | 58511194 | ID=Msa0080250-mRNA-1:exon:18792;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58511884 | 58512069 | 58511884 | ID=Msa0080250-mRNA-1:exon:18791;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58512269 | 58512400 | 58512269 | ID=Msa0080250-mRNA-1:exon:18790;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58512976 | 58513067 | 58512976 | ID=Msa0080250-mRNA-1:exon:18789;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58513168 | 58513264 | 58513168 | ID=Msa0080250-mRNA-1:exon:18788;Parent=Msa0080250-mRNA-1 |
| chr1_2 | exon | 58513468 | 58513949 | 58513468 | ID=Msa0080250-mRNA-1:exon:18787;Parent=Msa0080250-mRNA-1 |
| chr1_2 | five_prime_UTR | 58513684 | 58513949 | 58513684 | ID=Msa0080250-mRNA-1:five_prime_utr;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58513468 | 58513683 | 58513468 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58513168 | 58513264 | 58513168 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58512976 | 58513067 | 58512976 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58512269 | 58512400 | 58512269 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58511884 | 58512069 | 58511884 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58511194 | 58511357 | 58511194 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58511002 | 58511080 | 58511002 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58509730 | 58509858 | 58509730 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58509499 | 58509626 | 58509499 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | CDS | 58509017 | 58509395 | 58509017 | ID=Msa0080250-mRNA-1:cds;Parent=Msa0080250-mRNA-1 |
| chr1_2 | three_prime_UTR | 58508971 | 58509016 | 58508971 | ID=Msa0080250-mRNA-1:three_prime_utr;Parent=Msa0080250-mRNA-1 |
| chr1_2 | three_prime_UTR | 58508319 | 58508871 | 58508319 | ID=Msa0080250-mRNA-1:three_prime_utr;Parent=Msa0080250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
