Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182690 | XP_004494541.1 | 94.030 | 134 | 8 | 0 | 20 | 153 | 60 | 193 | 4.97e-86 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182690 | sp|O04834|SAR1A_ARATH | 90.299 | 134 | 13 | 0 | 20 | 153 | 60 | 193 | 1.85e-86 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182690 | A0A1S2XW14 | 94.030 | 134 | 8 | 0 | 20 | 153 | 60 | 193 | 2.37e-86 | 260 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0073170 | Msa0182690 | 0.819056 | 1.418741e-52 | -8.615850e-47 |
| Msa0147250 | Msa0182690 | 0.801321 | 9.512786e-49 | -8.615850e-47 |
| Msa0150800 | Msa0182690 | 0.802242 | 6.155470e-49 | -8.615850e-47 |
| Msa0157100 | Msa0182690 | 0.810909 | 9.118095e-51 | -8.615850e-47 |
| Msa0182680 | Msa0182690 | 0.839849 | 1.238919e-57 | -8.615850e-47 |
| Msa0182690 | Msa0270320 | 0.806792 | 6.927038e-50 | -8.615850e-47 |
| Msa0182690 | Msa0288100 | 0.805883 | 1.076479e-49 | -8.615850e-47 |
| Msa0182690 | Msa0345670 | 0.804059 | 2.590218e-49 | -8.615850e-47 |
| Msa0182690 | Msa0359030 | 0.826174 | 3.136076e-54 | -8.615850e-47 |
| Msa0182690 | Msa0473190 | 0.814046 | 1.880851e-51 | -8.615850e-47 |
| Msa0182690 | Msa0477130 | -0.800048 | 1.729922e-48 | -8.615850e-47 |
| Msa0182690 | Msa0498650 | 0.818086 | 2.354844e-52 | -8.615850e-47 |
| Msa0182690 | Msa0585230 | 0.835819 | 1.343592e-56 | -8.615850e-47 |
| Msa0182690 | Msa0672690 | 0.839223 | 1.801466e-57 | -8.615850e-47 |
| Msa0182690 | Msa0931520 | 0.842428 | 2.602084e-58 | -8.615850e-47 |
| Msa0182690 | Msa1247250 | 0.803249 | 3.814482e-49 | -8.615850e-47 |
| Msa0182690 | Msa1284680 | 0.800117 | 1.675232e-48 | -8.615850e-47 |
| Msa0182690 | Msa1288420 | 0.812520 | 4.067194e-51 | -8.615850e-47 |
| Msa0182690 | Msa1377500 | 0.835125 | 2.013366e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182690 | MtrunA17_Chr7g0271761 | 94.030 | 134 | 8 | 0 | 20 | 153 | 60 | 193 | 4.99e-90 | 260 |
| Msa0182690 | MtrunA17_Chr2g0294701 | 89.552 | 134 | 14 | 0 | 20 | 153 | 60 | 193 | 1.59e-87 | 253 |
| Msa0182690 | MtrunA17_Chr4g0068171 | 86.567 | 134 | 18 | 0 | 20 | 153 | 60 | 193 | 5.72e-86 | 249 |
| Msa0182690 | MtrunA17_Chr4g0012371 | 41.758 | 91 | 53 | 0 | 22 | 112 | 43 | 133 | 5.66e-18 | 75.9 |
| Msa0182690 | MtrunA17_Chr5g0434561 | 41.111 | 90 | 53 | 0 | 22 | 111 | 62 | 151 | 5.80e-17 | 73.9 |
| Msa0182690 | MtrunA17_Chr5g0401071 | 41.758 | 91 | 53 | 0 | 22 | 112 | 62 | 152 | 2.00e-16 | 72.4 |
| Msa0182690 | MtrunA17_Chr8g0373271 | 30.827 | 133 | 81 | 1 | 20 | 152 | 56 | 177 | 1.33e-15 | 70.1 |
| Msa0182690 | MtrunA17_Chr2g0287721 | 37.931 | 87 | 54 | 0 | 25 | 111 | 69 | 155 | 1.27e-14 | 68.2 |
| Msa0182690 | MtrunA17_Chr5g0401761 | 31.868 | 91 | 62 | 0 | 21 | 111 | 58 | 148 | 5.93e-14 | 65.9 |
| Msa0182690 | MtrunA17_Chr4g0072861 | 27.820 | 133 | 84 | 1 | 21 | 153 | 58 | 178 | 6.45e-14 | 65.9 |
| Msa0182690 | MtrunA17_Chr5g0395631 | 32.941 | 85 | 57 | 0 | 24 | 108 | 61 | 145 | 1.02e-12 | 62.8 |
| Msa0182690 | MtrunA17_Chr4g0039591 | 32.941 | 85 | 57 | 0 | 24 | 108 | 61 | 145 | 2.49e-12 | 61.6 |
| Msa0182690 | MtrunA17_Chr5g0413451 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 2.71e-12 | 61.2 |
| Msa0182690 | MtrunA17_Chr5g0413441 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 2.71e-12 | 61.2 |
| Msa0182690 | MtrunA17_Chr7g0270301 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 2.74e-12 | 61.2 |
| Msa0182690 | MtrunA17_Chr1g0194261 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 2.83e-12 | 61.2 |
| Msa0182690 | MtrunA17_Chr6g0450081 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 2.89e-12 | 61.2 |
| Msa0182690 | MtrunA17_Chr5g0395641 | 31.522 | 92 | 59 | 2 | 20 | 108 | 57 | 147 | 7.00e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182690 | AT4G02080.1 | 90.299 | 134 | 13 | 0 | 20 | 153 | 60 | 193 | 1.88e-87 | 254 |
| Msa0182690 | AT3G62560.1 | 87.970 | 133 | 16 | 0 | 20 | 152 | 60 | 192 | 5.37e-85 | 248 |
| Msa0182690 | AT1G56330.1 | 85.714 | 133 | 19 | 0 | 20 | 152 | 60 | 192 | 5.41e-83 | 242 |
| Msa0182690 | AT1G09180.1 | 81.343 | 134 | 25 | 0 | 20 | 153 | 60 | 193 | 9.25e-79 | 232 |
| Msa0182690 | AT1G02620.1 | 83.784 | 111 | 18 | 0 | 43 | 153 | 12 | 122 | 2.89e-67 | 200 |
| Msa0182690 | AT3G49870.2 | 45.055 | 91 | 50 | 0 | 22 | 112 | 43 | 133 | 4.75e-20 | 81.6 |
| Msa0182690 | AT3G49870.1 | 45.055 | 91 | 50 | 0 | 22 | 112 | 62 | 152 | 9.79e-20 | 81.3 |
| Msa0182690 | AT5G67560.1 | 45.055 | 91 | 50 | 0 | 22 | 112 | 62 | 152 | 1.55e-19 | 80.9 |
| Msa0182690 | AT3G49860.1 | 39.640 | 111 | 58 | 1 | 12 | 113 | 35 | 145 | 1.36e-18 | 78.2 |
| Msa0182690 | AT5G37680.2 | 40.659 | 91 | 54 | 0 | 22 | 112 | 15 | 105 | 8.14e-18 | 75.1 |
| Msa0182690 | AT5G37680.1 | 40.659 | 91 | 54 | 0 | 22 | 112 | 62 | 152 | 2.69e-17 | 75.1 |
| Msa0182690 | AT2G18390.1 | 31.818 | 132 | 79 | 1 | 21 | 152 | 57 | 177 | 1.57e-16 | 73.2 |
| Msa0182690 | AT2G24765.1 | 28.571 | 133 | 83 | 1 | 21 | 153 | 58 | 178 | 1.01e-13 | 65.5 |
| Msa0182690 | AT5G52210.1 | 38.889 | 90 | 53 | 1 | 22 | 111 | 68 | 155 | 1.68e-13 | 65.5 |
| Msa0182690 | AT5G52210.2 | 38.889 | 90 | 53 | 1 | 22 | 111 | 68 | 155 | 1.68e-13 | 65.5 |
| Msa0182690 | AT5G14670.2 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 3.74e-12 | 61.2 |
| Msa0182690 | AT5G14670.3 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 3.74e-12 | 61.2 |
| Msa0182690 | AT1G10630.1 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.24e-12 | 61.2 |
| Msa0182690 | AT1G10630.2 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.24e-12 | 61.2 |
| Msa0182690 | AT5G14670.1 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.31e-12 | 61.2 |
| Msa0182690 | AT3G62290.3 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.33e-12 | 61.2 |
| Msa0182690 | AT3G62290.1 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.33e-12 | 61.2 |
| Msa0182690 | AT3G62290.2 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.33e-12 | 61.2 |
| Msa0182690 | AT1G23490.1 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.38e-12 | 61.2 |
| Msa0182690 | AT1G70490.2 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.38e-12 | 61.2 |
| Msa0182690 | AT1G70490.7 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.38e-12 | 61.2 |
| Msa0182690 | AT1G70490.4 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.38e-12 | 61.2 |
| Msa0182690 | AT1G70490.3 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.38e-12 | 61.2 |
| Msa0182690 | AT1G70490.1 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.38e-12 | 61.2 |
| Msa0182690 | AT1G70490.6 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.38e-12 | 61.2 |
| Msa0182690 | AT1G70490.5 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.38e-12 | 61.2 |
| Msa0182690 | AT2G47170.2 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.51e-12 | 61.2 |
| Msa0182690 | AT2G47170.1 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.51e-12 | 61.2 |
| Msa0182690 | AT2G47170.3 | 29.670 | 91 | 64 | 0 | 21 | 111 | 58 | 148 | 4.51e-12 | 61.2 |
| Msa0182690 | AT2G15310.1 | 31.461 | 89 | 61 | 0 | 24 | 112 | 61 | 149 | 7.05e-12 | 61.2 |
| Msa0182690 | AT5G17060.2 | 32.941 | 85 | 57 | 0 | 24 | 108 | 61 | 145 | 1.30e-11 | 60.1 |
| Msa0182690 | AT5G17060.1 | 32.941 | 85 | 57 | 0 | 24 | 108 | 61 | 145 | 1.30e-11 | 60.1 |
| Msa0182690 | AT3G03120.1 | 32.941 | 85 | 57 | 0 | 24 | 108 | 61 | 145 | 2.91e-11 | 59.3 |
Find 44 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACATCAGATTAAAGCTTT+TGG | 0.288297 | 1_4:-71473269 | Msa0182690:CDS |
| GTGCAGTATTGTGAAGAAAA+TGG | 0.290748 | 1_4:-71472140 | Msa0182690:CDS |
| AGACGAATTGCGTTACCATT+TGG | 0.332275 | 1_4:-71472239 | Msa0182690:CDS |
| GTTATGGTGATGGTTTCATA+TGG | 0.337418 | 1_4:-71472117 | Msa0182690:CDS |
| TCTCCTTTCTGATGAATCAT+TGG | 0.342855 | 1_4:-71472320 | Msa0182690:CDS |
| CAGATTGCTCATAGAGTATT+GGG | 0.343960 | 1_4:-71473291 | Msa0182690:CDS |
| GACGAATTGCGTTACCATTT+GGG | 0.348316 | 1_4:-71472238 | Msa0182690:CDS |
| ATCAGATTGCTCGTAGAGTA+TGG | 0.358368 | 1_4:-71473211 | Msa0182690:CDS |
| TTGTTTCTGTACTTATGAAT+TGG | 0.402013 | 1_4:-71472029 | Msa0182690:three_prime_UTR |
| AATGTCCCTTTCCTTGTCCT+TGG | 0.407599 | 1_4:-71472295 | Msa0182690:CDS |
| CTCCTTTCTGATGAATCATT+GGG | 0.412647 | 1_4:-71472319 | Msa0182690:CDS |
| TCGTCTTCTGAGGCAGCATA+TGG | 0.429799 | 1_4:+71472256 | None:intergenic |
| TTCTTTAGTAAGAGATGGCT+TGG | 0.431594 | 1_4:-71472071 | Msa0182690:three_prime_UTR |
| TTATGGTGATGGTTTCATAT+GGG | 0.455567 | 1_4:-71472116 | Msa0182690:CDS |
| TCAGATTGCTCATAGAGTAT+TGG | 0.475568 | 1_4:-71473292 | Msa0182690:intron |
| TTATGAATTGGAAGTGTTGT+TGG | 0.489479 | 1_4:-71472017 | Msa0182690:three_prime_UTR |
| TAGAGTTCTTTAGTAAGAGA+TGG | 0.491654 | 1_4:-71472076 | Msa0182690:three_prime_UTR |
| GGCTTGAGCAACTTCACCAC+TGG | 0.494395 | 1_4:-71472217 | Msa0182690:CDS |
| GGTAGATGCAGTGGTCTACT+TGG | 0.495776 | 1_4:-71472395 | Msa0182690:CDS |
| TGCAGTATTGTGAAGAAAAT+GGG | 0.501905 | 1_4:-71472139 | Msa0182690:CDS |
| ATGGGTCGGACATTTGAGTC+TGG | 0.503815 | 1_4:+71472175 | None:intergenic |
| ATTTAGTGGCATGGAAATGA+AGG | 0.504759 | 1_4:-71473882 | None:intergenic |
| TGAAGTTGCTCAAGCCCAAA+TGG | 0.508916 | 1_4:+71472224 | None:intergenic |
| TGTTTCCAAGGACAAGGAAA+GGG | 0.516162 | 1_4:+71472290 | None:intergenic |
| TTCCCAATGATTCATCAGAA+AGG | 0.526650 | 1_4:+71472317 | None:intergenic |
| CTTCACCACTGGCAAGGGTA+AGG | 0.533342 | 1_4:-71472206 | Msa0182690:CDS |
| TTGTTTCCAAGGACAAGGAA+AGG | 0.535849 | 1_4:+71472289 | None:intergenic |
| GCATGGAAATGAAGGACAGC+TGG | 0.536111 | 1_4:-71473874 | Msa0182690:CDS |
| AAGAAAATGGGTTATGGTGA+TGG | 0.542914 | 1_4:-71472127 | Msa0182690:CDS |
| GAGCAACTTCACCACTGGCA+AGG | 0.556603 | 1_4:-71472212 | Msa0182690:CDS |
| AGCAACTTCACCACTGGCAA+GGG | 0.561923 | 1_4:-71472211 | Msa0182690:CDS |
| ATTGTGAAGAAAATGGGTTA+TGG | 0.564263 | 1_4:-71472133 | Msa0182690:CDS |
| ATGGAAAGATTACTATGCCC+AGG | 0.572618 | 1_4:-71473192 | Msa0182690:intron |
| AGACTCAAATGTCCGACCCA+TGG | 0.577020 | 1_4:-71472173 | Msa0182690:CDS |
| CTTGGTTAATGCTTATGACA+AGG | 0.580833 | 1_4:-71472377 | Msa0182690:CDS |
| TTTATTTCTATAAAATGACT+GGG | 0.586086 | 1_4:-71471955 | Msa0182690:three_prime_UTR |
| ACTGCACATGAATACCTCCA+TGG | 0.596081 | 1_4:+71472156 | None:intergenic |
| CTGCACATGAATACCTCCAT+GGG | 0.601771 | 1_4:+71472157 | None:intergenic |
| ATTTACCTTACCCTTGCCAG+TGG | 0.623563 | 1_4:+71472201 | None:intergenic |
| GTAACGCAATTCGTCTTCTG+AGG | 0.630635 | 1_4:+71472246 | None:intergenic |
| TGCAATGCAGGTAGATGCAG+TGG | 0.654691 | 1_4:-71472404 | Msa0182690:intron |
| CTCAAATGTCCGACCCATGG+AGG | 0.662910 | 1_4:-71472170 | Msa0182690:CDS |
| TGGAAATGAAGGACAGCTGG+CGG | 0.670375 | 1_4:-71473871 | Msa0182690:intron |
| ACATGAATACCTCCATGGGT+CGG | 0.682919 | 1_4:+71472161 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGTTTTATTATGATATA+TGG | - | chr1_4:71472393-71472412 | Msa0182690:CDS | 10.0% |
| !!! | AAATGTTTTATTATGATATA+TGG | - | chr1_4:71472393-71472412 | Msa0182690:CDS | 10.0% |
| !! | AAATATTTATTCATACCTTT+CGG | + | chr1_4:71472361-71472380 | None:intergenic | 15.0% |
| !! | ATATCTTAATCATGAAAATT+TGG | - | chr1_4:71472697-71472716 | Msa0182690:intron | 15.0% |
| !!! | TAAGTTGTAAATTGATTTAA+CGG | + | chr1_4:71473137-71473156 | None:intergenic | 15.0% |
| !!! | TTTTATTTCTATAAAATGAC+TGG | - | chr1_4:71473853-71473872 | Msa0182690:intron | 15.0% |
| !!! | TTTATTTCTATAAAATGACT+GGG | - | chr1_4:71473854-71473873 | Msa0182690:intron | 15.0% |
| !! | AAATATTTATTCATACCTTT+CGG | + | chr1_4:71472361-71472380 | None:intergenic | 15.0% |
| !! | ATATCTTAATCATGAAAATT+TGG | - | chr1_4:71472697-71472716 | Msa0182690:intron | 15.0% |
| !!! | TAAGTTGTAAATTGATTTAA+CGG | + | chr1_4:71473137-71473156 | None:intergenic | 15.0% |
| !!! | TTTTATTTCTATAAAATGAC+TGG | - | chr1_4:71473853-71473872 | Msa0182690:intron | 15.0% |
| !!! | TTTATTTCTATAAAATGACT+GGG | - | chr1_4:71473854-71473873 | Msa0182690:intron | 15.0% |
| !! | AAAACTCAAAATGAGATTTA+GGG | + | chr1_4:71472156-71472175 | None:intergenic | 20.0% |
| !!! | AAGTTTAAAGCTTTTGATTT+GGG | - | chr1_4:71472570-71472589 | Msa0182690:intron | 20.0% |
| !!! | ATGCCTTAAATACTTTTTTA+TGG | - | chr1_4:71472653-71472672 | Msa0182690:intron | 20.0% |
| !!! | TAGCCATAAAAAAGTATTTA+AGG | + | chr1_4:71472659-71472678 | None:intergenic | 20.0% |
| !! | AAAACTCAAAATGAGATTTA+GGG | + | chr1_4:71472156-71472175 | None:intergenic | 20.0% |
| !!! | AAGTTTAAAGCTTTTGATTT+GGG | - | chr1_4:71472570-71472589 | Msa0182690:intron | 20.0% |
| !!! | ATGCCTTAAATACTTTTTTA+TGG | - | chr1_4:71472653-71472672 | Msa0182690:intron | 20.0% |
| !!! | TAGCCATAAAAAAGTATTTA+AGG | + | chr1_4:71472659-71472678 | None:intergenic | 20.0% |
| ! | TTTCATTAAAATATTCCAGC+AGG | + | chr1_4:71471982-71472001 | None:intergenic | 25.0% |
| !!! | TCCATGTTTCAATTTTAGTA+GGG | + | chr1_4:71472093-71472112 | None:intergenic | 25.0% |
| ! | CAAAACTCAAAATGAGATTT+AGG | + | chr1_4:71472157-71472176 | None:intergenic | 25.0% |
| !! | TTCATTTTCCTTTATTGATC+TGG | - | chr1_4:71472309-71472328 | Msa0182690:CDS | 25.0% |
| !!! | TTCTGAGTTAGTTTTTGATT+TGG | - | chr1_4:71472487-71472506 | Msa0182690:intron | 25.0% |
| !!! | TCTGAGTTAGTTTTTGATTT+GGG | - | chr1_4:71472488-71472507 | Msa0182690:intron | 25.0% |
| !! | AACATCAGATTAAAGCTTTT+GGG | - | chr1_4:71472541-71472560 | Msa0182690:intron | 25.0% |
| !!! | CAAGTTTAAAGCTTTTGATT+TGG | - | chr1_4:71472569-71472588 | Msa0182690:intron | 25.0% |
| !!! | AGTTTAAAGCTTTTGATTTG+GGG | - | chr1_4:71472571-71472590 | Msa0182690:intron | 25.0% |
| ! | GATTAAGATATTCTTTCACT+TGG | + | chr1_4:71472688-71472707 | None:intergenic | 25.0% |
| ! | TCCAAGACATAATATAATCA+GGG | + | chr1_4:71472738-71472757 | None:intergenic | 25.0% |
| ! | ATTATATTATGTCTTGGACT+TGG | - | chr1_4:71472740-71472759 | Msa0182690:intron | 25.0% |
| !! | CTATATTTGAAATCACTAAC+TGG | + | chr1_4:71472820-71472839 | None:intergenic | 25.0% |
| ! | ATACAATGGATAGAATAGAA+GGG | + | chr1_4:71473083-71473102 | None:intergenic | 25.0% |
| ! | TATACAATGGATAGAATAGA+AGG | + | chr1_4:71473084-71473103 | None:intergenic | 25.0% |
| ! | TTATATGCTACTGTATACAA+TGG | + | chr1_4:71473097-71473116 | None:intergenic | 25.0% |
| ! | TCTCAGTTAAATATTGAACA+GGG | + | chr1_4:71473210-71473229 | None:intergenic | 25.0% |
| ! | TTCTCAGTTAAATATTGAAC+AGG | + | chr1_4:71473211-71473230 | None:intergenic | 25.0% |
| ! | AAGATTTGATGAGTCAAAAA+AGG | - | chr1_4:71473456-71473475 | Msa0182690:intron | 25.0% |
| !!! | GAATATCAATTTTGTTTCCA+AGG | + | chr1_4:71473534-71473553 | None:intergenic | 25.0% |
| !!! | TTGTTTCTGTACTTATGAAT+TGG | - | chr1_4:71473780-71473799 | Msa0182690:intron | 25.0% |
| ! | TTTCATTAAAATATTCCAGC+AGG | + | chr1_4:71471982-71472001 | None:intergenic | 25.0% |
| !!! | TCCATGTTTCAATTTTAGTA+GGG | + | chr1_4:71472093-71472112 | None:intergenic | 25.0% |
| ! | CAAAACTCAAAATGAGATTT+AGG | + | chr1_4:71472157-71472176 | None:intergenic | 25.0% |
| !! | TTCATTTTCCTTTATTGATC+TGG | - | chr1_4:71472309-71472328 | Msa0182690:CDS | 25.0% |
| !!! | TTCTGAGTTAGTTTTTGATT+TGG | - | chr1_4:71472487-71472506 | Msa0182690:intron | 25.0% |
| !!! | TCTGAGTTAGTTTTTGATTT+GGG | - | chr1_4:71472488-71472507 | Msa0182690:intron | 25.0% |
| !! | AACATCAGATTAAAGCTTTT+GGG | - | chr1_4:71472541-71472560 | Msa0182690:intron | 25.0% |
| !!! | CAAGTTTAAAGCTTTTGATT+TGG | - | chr1_4:71472569-71472588 | Msa0182690:intron | 25.0% |
| !!! | AGTTTAAAGCTTTTGATTTG+GGG | - | chr1_4:71472571-71472590 | Msa0182690:intron | 25.0% |
| ! | GATTAAGATATTCTTTCACT+TGG | + | chr1_4:71472688-71472707 | None:intergenic | 25.0% |
| ! | TCCAAGACATAATATAATCA+GGG | + | chr1_4:71472738-71472757 | None:intergenic | 25.0% |
| ! | ATTATATTATGTCTTGGACT+TGG | - | chr1_4:71472740-71472759 | Msa0182690:intron | 25.0% |
| !! | CTATATTTGAAATCACTAAC+TGG | + | chr1_4:71472820-71472839 | None:intergenic | 25.0% |
| ! | ATACAATGGATAGAATAGAA+GGG | + | chr1_4:71473083-71473102 | None:intergenic | 25.0% |
| ! | TATACAATGGATAGAATAGA+AGG | + | chr1_4:71473084-71473103 | None:intergenic | 25.0% |
| ! | TTATATGCTACTGTATACAA+TGG | + | chr1_4:71473097-71473116 | None:intergenic | 25.0% |
| ! | TCTCAGTTAAATATTGAACA+GGG | + | chr1_4:71473210-71473229 | None:intergenic | 25.0% |
| ! | TTCTCAGTTAAATATTGAAC+AGG | + | chr1_4:71473211-71473230 | None:intergenic | 25.0% |
| ! | AAGATTTGATGAGTCAAAAA+AGG | - | chr1_4:71473456-71473475 | Msa0182690:intron | 25.0% |
| !!! | GAATATCAATTTTGTTTCCA+AGG | + | chr1_4:71473534-71473553 | None:intergenic | 25.0% |
| !!! | TTGTTTCTGTACTTATGAAT+TGG | - | chr1_4:71473780-71473799 | Msa0182690:intron | 25.0% |
| !! | AAAAAACACTTTTTACCTGC+TGG | - | chr1_4:71471964-71471983 | Msa0182690:three_prime_UTR | 30.0% |
| !!! | TGATAACTGGTGGTTTTTTA+GGG | + | chr1_4:71472053-71472072 | None:intergenic | 30.0% |
| TACAAGTAATTGCTGATAAC+TGG | + | chr1_4:71472066-71472085 | None:intergenic | 30.0% | |
| !! | CATGTTTCAATTTTAGTAGG+GGG | + | chr1_4:71472091-71472110 | None:intergenic | 30.0% |
| !! | CCATGTTTCAATTTTAGTAG+GGG | + | chr1_4:71472092-71472111 | None:intergenic | 30.0% |
| !! | CTCCATGTTTCAATTTTAGT+AGG | + | chr1_4:71472094-71472113 | None:intergenic | 30.0% |
| AAGAAGAATGTTAAGCATGA+AGG | + | chr1_4:71472190-71472209 | None:intergenic | 30.0% | |
| ! | GAACTTTAAGTTAAGCATGA+AGG | + | chr1_4:71472260-71472279 | None:intergenic | 30.0% |
| CTATAACTCCAGATCAATAA+AGG | + | chr1_4:71472320-71472339 | None:intergenic | 30.0% | |
| ! | TAGATTCATTTTCAACCGAA+AGG | - | chr1_4:71472343-71472362 | Msa0182690:CDS | 30.0% |
| !!! | CTGAGTTAGTTTTTGATTTG+GGG | - | chr1_4:71472489-71472508 | Msa0182690:intron | 30.0% |
| !!! | TGAGTTAGTTTTTGATTTGG+GGG | - | chr1_4:71472490-71472509 | Msa0182690:intron | 30.0% |
| ! | GAACATCAGATTAAAGCTTT+TGG | - | chr1_4:71472540-71472559 | Msa0182690:intron | 30.0% |
| !!! | GTTTAAAGCTTTTGATTTGG+GGG | - | chr1_4:71472572-71472591 | Msa0182690:intron | 30.0% |
| !!! | TTTAAAGCTTTTGATTTGGG+GGG | - | chr1_4:71472573-71472592 | Msa0182690:intron | 30.0% |
| AGACATAATATAATCAGGGA+AGG | + | chr1_4:71472734-71472753 | None:intergenic | 30.0% | |
| TCCCTGATTATATTATGTCT+TGG | - | chr1_4:71472734-71472753 | Msa0182690:intron | 30.0% | |
| GTCCAAGACATAATATAATC+AGG | + | chr1_4:71472739-71472758 | None:intergenic | 30.0% | |
| TATAGAACTGCCTAAGATAT+TGG | - | chr1_4:71472835-71472854 | Msa0182690:intron | 30.0% | |
| AGATTCTAAGCCAATATCTT+AGG | + | chr1_4:71472848-71472867 | None:intergenic | 30.0% | |
| TCTTATGTTCAGTACCATAA+TGG | - | chr1_4:71472901-71472920 | Msa0182690:intron | 30.0% | |
| CTATGATTGTGTTTCCATTA+TGG | + | chr1_4:71472918-71472937 | None:intergenic | 30.0% | |
| ! | GTTGTAAATTGATTTAACGG+CGG | + | chr1_4:71473134-71473153 | None:intergenic | 30.0% |
| TAACTGAGAAACAAACTTGA+TGG | - | chr1_4:71473175-71473194 | Msa0182690:intron | 30.0% | |
| CTAAAAGCAATAGAGTGAAA+AGG | + | chr1_4:71473261-71473280 | None:intergenic | 30.0% | |
| AGTACCTTATAAGACATTTC+TGG | - | chr1_4:71473279-71473298 | Msa0182690:CDS | 30.0% | |
| TGCAGTATTGTGAAGAAAAT+GGG | - | chr1_4:71473670-71473689 | Msa0182690:intron | 30.0% | |
| !! | ATTGTGAAGAAAATGGGTTA+TGG | - | chr1_4:71473676-71473695 | Msa0182690:intron | 30.0% |
| !! | TTATGGTGATGGTTTCATAT+GGG | - | chr1_4:71473693-71473712 | Msa0182690:intron | 30.0% |
| TAGAGTTCTTTAGTAAGAGA+TGG | - | chr1_4:71473733-71473752 | Msa0182690:intron | 30.0% | |
| !! | TTATGAATTGGAAGTGTTGT+TGG | - | chr1_4:71473792-71473811 | Msa0182690:intron | 30.0% |
| !! | AAAAAACACTTTTTACCTGC+TGG | - | chr1_4:71471964-71471983 | Msa0182690:three_prime_UTR | 30.0% |
| !!! | TGATAACTGGTGGTTTTTTA+GGG | + | chr1_4:71472053-71472072 | None:intergenic | 30.0% |
| TACAAGTAATTGCTGATAAC+TGG | + | chr1_4:71472066-71472085 | None:intergenic | 30.0% | |
| !! | CATGTTTCAATTTTAGTAGG+GGG | + | chr1_4:71472091-71472110 | None:intergenic | 30.0% |
| !! | CCATGTTTCAATTTTAGTAG+GGG | + | chr1_4:71472092-71472111 | None:intergenic | 30.0% |
| !! | CTCCATGTTTCAATTTTAGT+AGG | + | chr1_4:71472094-71472113 | None:intergenic | 30.0% |
| AAGAAGAATGTTAAGCATGA+AGG | + | chr1_4:71472190-71472209 | None:intergenic | 30.0% | |
| ! | GAACTTTAAGTTAAGCATGA+AGG | + | chr1_4:71472260-71472279 | None:intergenic | 30.0% |
| CTATAACTCCAGATCAATAA+AGG | + | chr1_4:71472320-71472339 | None:intergenic | 30.0% | |
| ! | TAGATTCATTTTCAACCGAA+AGG | - | chr1_4:71472343-71472362 | Msa0182690:CDS | 30.0% |
| !!! | CTGAGTTAGTTTTTGATTTG+GGG | - | chr1_4:71472489-71472508 | Msa0182690:intron | 30.0% |
| !!! | TGAGTTAGTTTTTGATTTGG+GGG | - | chr1_4:71472490-71472509 | Msa0182690:intron | 30.0% |
| ! | GAACATCAGATTAAAGCTTT+TGG | - | chr1_4:71472540-71472559 | Msa0182690:intron | 30.0% |
| !!! | GTTTAAAGCTTTTGATTTGG+GGG | - | chr1_4:71472572-71472591 | Msa0182690:intron | 30.0% |
| !!! | TTTAAAGCTTTTGATTTGGG+GGG | - | chr1_4:71472573-71472592 | Msa0182690:intron | 30.0% |
| AGACATAATATAATCAGGGA+AGG | + | chr1_4:71472734-71472753 | None:intergenic | 30.0% | |
| TCCCTGATTATATTATGTCT+TGG | - | chr1_4:71472734-71472753 | Msa0182690:intron | 30.0% | |
| GTCCAAGACATAATATAATC+AGG | + | chr1_4:71472739-71472758 | None:intergenic | 30.0% | |
| TATAGAACTGCCTAAGATAT+TGG | - | chr1_4:71472835-71472854 | Msa0182690:intron | 30.0% | |
| AGATTCTAAGCCAATATCTT+AGG | + | chr1_4:71472848-71472867 | None:intergenic | 30.0% | |
| TCTTATGTTCAGTACCATAA+TGG | - | chr1_4:71472901-71472920 | Msa0182690:intron | 30.0% | |
| CTATGATTGTGTTTCCATTA+TGG | + | chr1_4:71472918-71472937 | None:intergenic | 30.0% | |
| ! | GTTGTAAATTGATTTAACGG+CGG | + | chr1_4:71473134-71473153 | None:intergenic | 30.0% |
| TAACTGAGAAACAAACTTGA+TGG | - | chr1_4:71473175-71473194 | Msa0182690:intron | 30.0% | |
| CTAAAAGCAATAGAGTGAAA+AGG | + | chr1_4:71473261-71473280 | None:intergenic | 30.0% | |
| AGTACCTTATAAGACATTTC+TGG | - | chr1_4:71473279-71473298 | Msa0182690:CDS | 30.0% | |
| TGCAGTATTGTGAAGAAAAT+GGG | - | chr1_4:71473670-71473689 | Msa0182690:intron | 30.0% | |
| !! | ATTGTGAAGAAAATGGGTTA+TGG | - | chr1_4:71473676-71473695 | Msa0182690:intron | 30.0% |
| !! | TTATGGTGATGGTTTCATAT+GGG | - | chr1_4:71473693-71473712 | Msa0182690:intron | 30.0% |
| TAGAGTTCTTTAGTAAGAGA+TGG | - | chr1_4:71473733-71473752 | Msa0182690:intron | 30.0% | |
| !! | TTATGAATTGGAAGTGTTGT+TGG | - | chr1_4:71473792-71473811 | Msa0182690:intron | 30.0% |
| TGAGCAGCAGAAACAATAAA+TGG | + | chr1_4:71472026-71472045 | None:intergenic | 35.0% | |
| !!! | ATAACTGGTGGTTTTTTAGG+GGG | + | chr1_4:71472051-71472070 | None:intergenic | 35.0% |
| !!! | GATAACTGGTGGTTTTTTAG+GGG | + | chr1_4:71472052-71472071 | None:intergenic | 35.0% |
| !!! | CTGATAACTGGTGGTTTTTT+AGG | + | chr1_4:71472054-71472073 | None:intergenic | 35.0% |
| AAGTAATTGCTGATAACTGG+TGG | + | chr1_4:71472063-71472082 | None:intergenic | 35.0% | |
| CCCCTACTAAAATTGAAACA+TGG | - | chr1_4:71472089-71472108 | Msa0182690:exon | 35.0% | |
| ACTCAAAATGAGATTTAGGG+TGG | + | chr1_4:71472153-71472172 | None:intergenic | 35.0% | |
| ATGTTAAGCATGAAGGAGAA+GGG | + | chr1_4:71472183-71472202 | None:intergenic | 35.0% | |
| AATGTTAAGCATGAAGGAGA+AGG | + | chr1_4:71472184-71472203 | None:intergenic | 35.0% | |
| TTGTTGTATAGCAGTGTTGT+TGG | - | chr1_4:71472416-71472435 | Msa0182690:intron | 35.0% | |
| !!! | GAGTTAGTTTTTGATTTGGG+GGG | - | chr1_4:71472491-71472510 | Msa0182690:intron | 35.0% |
| TCAGATTGCTCATAGAGTAT+TGG | - | chr1_4:71472517-71472536 | Msa0182690:intron | 35.0% | |
| ! | CAGATTGCTCATAGAGTATT+GGG | - | chr1_4:71472518-71472537 | Msa0182690:intron | 35.0% |
| ATGAAAATTTGGATGCCACT+AGG | - | chr1_4:71472708-71472727 | Msa0182690:intron | 35.0% | |
| ! | GAGAAACAAACTTGATGGTT+TGG | - | chr1_4:71473180-71473199 | Msa0182690:intron | 35.0% |
| AGAGCCAGAAATGTCTTATA+AGG | + | chr1_4:71473286-71473305 | None:intergenic | 35.0% | |
| AACCGAGAAACATTACATGT+TGG | - | chr1_4:71473342-71473361 | Msa0182690:intron | 35.0% | |
| CACCAACATGTAATGTTTCT+CGG | + | chr1_4:71473347-71473366 | None:intergenic | 35.0% | |
| CTTGGTTAATGCTTATGACA+AGG | - | chr1_4:71473432-71473451 | Msa0182690:intron | 35.0% | |
| TGATGAGTCAAAAAAGGAGT+TGG | - | chr1_4:71473462-71473481 | Msa0182690:intron | 35.0% | |
| TCTCCTTTCTGATGAATCAT+TGG | - | chr1_4:71473489-71473508 | Msa0182690:intron | 35.0% | |
| CTCCTTTCTGATGAATCATT+GGG | - | chr1_4:71473490-71473509 | Msa0182690:intron | 35.0% | |
| TTCCCAATGATTCATCAGAA+AGG | + | chr1_4:71473495-71473514 | None:intergenic | 35.0% | |
| !! | CAATTTTGTTTCCAAGGACA+AGG | + | chr1_4:71473528-71473547 | None:intergenic | 35.0% |
| GTGCAGTATTGTGAAGAAAA+TGG | - | chr1_4:71473669-71473688 | Msa0182690:intron | 35.0% | |
| !! | AAGAAAATGGGTTATGGTGA+TGG | - | chr1_4:71473682-71473701 | Msa0182690:intron | 35.0% |
| !! | GTTATGGTGATGGTTTCATA+TGG | - | chr1_4:71473692-71473711 | Msa0182690:intron | 35.0% |
| TTCTTTAGTAAGAGATGGCT+TGG | - | chr1_4:71473738-71473757 | Msa0182690:intron | 35.0% | |
| TGAGCAGCAGAAACAATAAA+TGG | + | chr1_4:71472026-71472045 | None:intergenic | 35.0% | |
| !!! | ATAACTGGTGGTTTTTTAGG+GGG | + | chr1_4:71472051-71472070 | None:intergenic | 35.0% |
| !!! | GATAACTGGTGGTTTTTTAG+GGG | + | chr1_4:71472052-71472071 | None:intergenic | 35.0% |
| !!! | CTGATAACTGGTGGTTTTTT+AGG | + | chr1_4:71472054-71472073 | None:intergenic | 35.0% |
| AAGTAATTGCTGATAACTGG+TGG | + | chr1_4:71472063-71472082 | None:intergenic | 35.0% | |
| CCCCTACTAAAATTGAAACA+TGG | - | chr1_4:71472089-71472108 | Msa0182690:exon | 35.0% | |
| ACTCAAAATGAGATTTAGGG+TGG | + | chr1_4:71472153-71472172 | None:intergenic | 35.0% | |
| ATGTTAAGCATGAAGGAGAA+GGG | + | chr1_4:71472183-71472202 | None:intergenic | 35.0% | |
| AATGTTAAGCATGAAGGAGA+AGG | + | chr1_4:71472184-71472203 | None:intergenic | 35.0% | |
| TTGTTGTATAGCAGTGTTGT+TGG | - | chr1_4:71472416-71472435 | Msa0182690:intron | 35.0% | |
| !!! | GAGTTAGTTTTTGATTTGGG+GGG | - | chr1_4:71472491-71472510 | Msa0182690:intron | 35.0% |
| TCAGATTGCTCATAGAGTAT+TGG | - | chr1_4:71472517-71472536 | Msa0182690:intron | 35.0% | |
| ! | CAGATTGCTCATAGAGTATT+GGG | - | chr1_4:71472518-71472537 | Msa0182690:intron | 35.0% |
| ATGAAAATTTGGATGCCACT+AGG | - | chr1_4:71472708-71472727 | Msa0182690:intron | 35.0% | |
| ! | GAGAAACAAACTTGATGGTT+TGG | - | chr1_4:71473180-71473199 | Msa0182690:intron | 35.0% |
| AGAGCCAGAAATGTCTTATA+AGG | + | chr1_4:71473286-71473305 | None:intergenic | 35.0% | |
| AACCGAGAAACATTACATGT+TGG | - | chr1_4:71473342-71473361 | Msa0182690:intron | 35.0% | |
| CACCAACATGTAATGTTTCT+CGG | + | chr1_4:71473347-71473366 | None:intergenic | 35.0% | |
| CTTGGTTAATGCTTATGACA+AGG | - | chr1_4:71473432-71473451 | Msa0182690:intron | 35.0% | |
| TGATGAGTCAAAAAAGGAGT+TGG | - | chr1_4:71473462-71473481 | Msa0182690:intron | 35.0% | |
| TCTCCTTTCTGATGAATCAT+TGG | - | chr1_4:71473489-71473508 | Msa0182690:intron | 35.0% | |
| CTCCTTTCTGATGAATCATT+GGG | - | chr1_4:71473490-71473509 | Msa0182690:intron | 35.0% | |
| TTCCCAATGATTCATCAGAA+AGG | + | chr1_4:71473495-71473514 | None:intergenic | 35.0% | |
| !! | CAATTTTGTTTCCAAGGACA+AGG | + | chr1_4:71473528-71473547 | None:intergenic | 35.0% |
| GTGCAGTATTGTGAAGAAAA+TGG | - | chr1_4:71473669-71473688 | Msa0182690:intron | 35.0% | |
| !! | AAGAAAATGGGTTATGGTGA+TGG | - | chr1_4:71473682-71473701 | Msa0182690:intron | 35.0% |
| !! | GTTATGGTGATGGTTTCATA+TGG | - | chr1_4:71473692-71473711 | Msa0182690:intron | 35.0% |
| TTCTTTAGTAAGAGATGGCT+TGG | - | chr1_4:71473738-71473757 | Msa0182690:intron | 35.0% | |
| GGAAATGTCAAGAACATGTG+TGG | + | chr1_4:71472224-71472243 | None:intergenic | 40.0% | |
| ! | CATGAAGGAGAAAGCATATC+TGG | + | chr1_4:71472245-71472264 | None:intergenic | 40.0% |
| ATCAGATTGCTCGTAGAGTA+TGG | - | chr1_4:71472598-71472617 | Msa0182690:intron | 40.0% | |
| ATGGAAAGATTACTATGCCC+AGG | - | chr1_4:71472617-71472636 | Msa0182690:intron | 40.0% | |
| GCATAGAAAAAGAGAGACCT+GGG | + | chr1_4:71472637-71472656 | None:intergenic | 40.0% | |
| !! | TTTTGTTTGTGTCGCTAGAC+AGG | - | chr1_4:71472778-71472797 | Msa0182690:intron | 40.0% |
| !! | TCATGAGTTTGTTGCAATGC+AGG | - | chr1_4:71473393-71473412 | Msa0182690:intron | 40.0% |
| TGTTTCCAAGGACAAGGAAA+GGG | + | chr1_4:71473522-71473541 | None:intergenic | 40.0% | |
| TTGTTTCCAAGGACAAGGAA+AGG | + | chr1_4:71473523-71473542 | None:intergenic | 40.0% | |
| AGACGAATTGCGTTACCATT+TGG | - | chr1_4:71473570-71473589 | Msa0182690:intron | 40.0% | |
| GACGAATTGCGTTACCATTT+GGG | - | chr1_4:71473571-71473590 | Msa0182690:intron | 40.0% | |
| GGAAATGTCAAGAACATGTG+TGG | + | chr1_4:71472224-71472243 | None:intergenic | 40.0% | |
| ! | CATGAAGGAGAAAGCATATC+TGG | + | chr1_4:71472245-71472264 | None:intergenic | 40.0% |
| ATCAGATTGCTCGTAGAGTA+TGG | - | chr1_4:71472598-71472617 | Msa0182690:intron | 40.0% | |
| ATGGAAAGATTACTATGCCC+AGG | - | chr1_4:71472617-71472636 | Msa0182690:intron | 40.0% | |
| GCATAGAAAAAGAGAGACCT+GGG | + | chr1_4:71472637-71472656 | None:intergenic | 40.0% | |
| !! | TTTTGTTTGTGTCGCTAGAC+AGG | - | chr1_4:71472778-71472797 | Msa0182690:intron | 40.0% |
| !! | TCATGAGTTTGTTGCAATGC+AGG | - | chr1_4:71473393-71473412 | Msa0182690:intron | 40.0% |
| TGTTTCCAAGGACAAGGAAA+GGG | + | chr1_4:71473522-71473541 | None:intergenic | 40.0% | |
| TTGTTTCCAAGGACAAGGAA+AGG | + | chr1_4:71473523-71473542 | None:intergenic | 40.0% | |
| AGACGAATTGCGTTACCATT+TGG | - | chr1_4:71473570-71473589 | Msa0182690:intron | 40.0% | |
| GACGAATTGCGTTACCATTT+GGG | - | chr1_4:71473571-71473590 | Msa0182690:intron | 40.0% | |
| GTCAAGAACATGTGTGGCTA+TGG | + | chr1_4:71472218-71472237 | None:intergenic | 45.0% | |
| GGCATAGAAAAAGAGAGACC+TGG | + | chr1_4:71472638-71472657 | None:intergenic | 45.0% | |
| TATAATCAGGGAAGGCCTAG+TGG | + | chr1_4:71472726-71472745 | None:intergenic | 45.0% | |
| AATGTCCCTTTCCTTGTCCT+TGG | - | chr1_4:71473514-71473533 | Msa0182690:intron | 45.0% | |
| GTAACGCAATTCGTCTTCTG+AGG | + | chr1_4:71473566-71473585 | None:intergenic | 45.0% | |
| TGAAGTTGCTCAAGCCCAAA+TGG | + | chr1_4:71473588-71473607 | None:intergenic | 45.0% | |
| ATTTACCTTACCCTTGCCAG+TGG | + | chr1_4:71473611-71473630 | None:intergenic | 45.0% | |
| ACATGAATACCTCCATGGGT+CGG | + | chr1_4:71473651-71473670 | None:intergenic | 45.0% | |
| CTGCACATGAATACCTCCAT+GGG | + | chr1_4:71473655-71473674 | None:intergenic | 45.0% | |
| ACTGCACATGAATACCTCCA+TGG | + | chr1_4:71473656-71473675 | None:intergenic | 45.0% | |
| GTCAAGAACATGTGTGGCTA+TGG | + | chr1_4:71472218-71472237 | None:intergenic | 45.0% | |
| GGCATAGAAAAAGAGAGACC+TGG | + | chr1_4:71472638-71472657 | None:intergenic | 45.0% | |
| TATAATCAGGGAAGGCCTAG+TGG | + | chr1_4:71472726-71472745 | None:intergenic | 45.0% | |
| AATGTCCCTTTCCTTGTCCT+TGG | - | chr1_4:71473514-71473533 | Msa0182690:intron | 45.0% | |
| GTAACGCAATTCGTCTTCTG+AGG | + | chr1_4:71473566-71473585 | None:intergenic | 45.0% | |
| TGAAGTTGCTCAAGCCCAAA+TGG | + | chr1_4:71473588-71473607 | None:intergenic | 45.0% | |
| ATTTACCTTACCCTTGCCAG+TGG | + | chr1_4:71473611-71473630 | None:intergenic | 45.0% | |
| ACATGAATACCTCCATGGGT+CGG | + | chr1_4:71473651-71473670 | None:intergenic | 45.0% | |
| CTGCACATGAATACCTCCAT+GGG | + | chr1_4:71473655-71473674 | None:intergenic | 45.0% | |
| ACTGCACATGAATACCTCCA+TGG | + | chr1_4:71473656-71473675 | None:intergenic | 45.0% | |
| TGGAAATGAAGGACAGCTGG+CGG | - | chr1_4:71471938-71471957 | Msa0182690:three_prime_UTR | 50.0% | |
| GGTGGTGTTTCACGTGTGTA+AGG | + | chr1_4:71472135-71472154 | None:intergenic | 50.0% | |
| TGCAATGCAGGTAGATGCAG+TGG | - | chr1_4:71473405-71473424 | Msa0182690:intron | 50.0% | |
| GGTAGATGCAGTGGTCTACT+TGG | - | chr1_4:71473414-71473433 | Msa0182690:intron | 50.0% | |
| !! | TCGTCTTCTGAGGCAGCATA+TGG | + | chr1_4:71473556-71473575 | None:intergenic | 50.0% |
| AGCAACTTCACCACTGGCAA+GGG | - | chr1_4:71473598-71473617 | Msa0182690:intron | 50.0% | |
| ATGGGTCGGACATTTGAGTC+TGG | + | chr1_4:71473637-71473656 | None:intergenic | 50.0% | |
| AGACTCAAATGTCCGACCCA+TGG | - | chr1_4:71473636-71473655 | Msa0182690:intron | 50.0% | |
| TGGAAATGAAGGACAGCTGG+CGG | - | chr1_4:71471938-71471957 | Msa0182690:three_prime_UTR | 50.0% | |
| GGTGGTGTTTCACGTGTGTA+AGG | + | chr1_4:71472135-71472154 | None:intergenic | 50.0% | |
| TGCAATGCAGGTAGATGCAG+TGG | - | chr1_4:71473405-71473424 | Msa0182690:intron | 50.0% | |
| GGTAGATGCAGTGGTCTACT+TGG | - | chr1_4:71473414-71473433 | Msa0182690:intron | 50.0% | |
| !! | TCGTCTTCTGAGGCAGCATA+TGG | + | chr1_4:71473556-71473575 | None:intergenic | 50.0% |
| AGCAACTTCACCACTGGCAA+GGG | - | chr1_4:71473598-71473617 | Msa0182690:intron | 50.0% | |
| ATGGGTCGGACATTTGAGTC+TGG | + | chr1_4:71473637-71473656 | None:intergenic | 50.0% | |
| AGACTCAAATGTCCGACCCA+TGG | - | chr1_4:71473636-71473655 | Msa0182690:intron | 50.0% | |
| GGCTTGAGCAACTTCACCAC+TGG | - | chr1_4:71473592-71473611 | Msa0182690:intron | 55.0% | |
| GAGCAACTTCACCACTGGCA+AGG | - | chr1_4:71473597-71473616 | Msa0182690:intron | 55.0% | |
| CTTCACCACTGGCAAGGGTA+AGG | - | chr1_4:71473603-71473622 | Msa0182690:intron | 55.0% | |
| CTCAAATGTCCGACCCATGG+AGG | - | chr1_4:71473639-71473658 | Msa0182690:intron | 55.0% | |
| GGCTTGAGCAACTTCACCAC+TGG | - | chr1_4:71473592-71473611 | Msa0182690:intron | 55.0% | |
| GAGCAACTTCACCACTGGCA+AGG | - | chr1_4:71473597-71473616 | Msa0182690:intron | 55.0% | |
| CTTCACCACTGGCAAGGGTA+AGG | - | chr1_4:71473603-71473622 | Msa0182690:intron | 55.0% | |
| CTCAAATGTCCGACCCATGG+AGG | - | chr1_4:71473639-71473658 | Msa0182690:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 71471937 | 71473894 | 71471937 | ID=Msa0182690;Name=Msa0182690 |
| chr1_4 | mRNA | 71471937 | 71473894 | 71471937 | ID=Msa0182690-mRNA-1;Parent=Msa0182690;Name=Msa0182690-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.5|0.66|0.66|1|1|3|159|153 |
| chr1_4 | exon | 71471937 | 71472416 | 71471937 | ID=Msa0182690-mRNA-1:exon:23927;Parent=Msa0182690-mRNA-1 |
| chr1_4 | exon | 71473193 | 71473310 | 71473193 | ID=Msa0182690-mRNA-1:exon:23926;Parent=Msa0182690-mRNA-1 |
| chr1_4 | exon | 71473872 | 71473894 | 71473872 | ID=Msa0182690-mRNA-1:exon:23925;Parent=Msa0182690-mRNA-1 |
| chr1_4 | CDS | 71473872 | 71473894 | 71473872 | ID=Msa0182690-mRNA-1:cds;Parent=Msa0182690-mRNA-1 |
| chr1_4 | CDS | 71473193 | 71473310 | 71473193 | ID=Msa0182690-mRNA-1:cds;Parent=Msa0182690-mRNA-1 |
| chr1_4 | CDS | 71472096 | 71472416 | 71472096 | ID=Msa0182690-mRNA-1:cds;Parent=Msa0182690-mRNA-1 |
| chr1_4 | three_prime_UTR | 71471937 | 71472095 | 71471937 | ID=Msa0182690-mRNA-1:three_prime_utr;Parent=Msa0182690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
