Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377500 | XP_013449864.1 | 98.551 | 138 | 2 | 0 | 21 | 158 | 1 | 138 | 2.70e-96 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377500 | sp|P49964|SRP19_ORYSJ | 72.414 | 116 | 32 | 0 | 27 | 142 | 9 | 124 | 2.69e-61 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377500 | A0A072U2F6 | 98.551 | 138 | 2 | 0 | 21 | 158 | 1 | 138 | 1.29e-96 | 284 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006380 | Msa1377500 | 0.825757 | 3.939148e-54 | -8.615850e-47 |
| Msa0009430 | Msa1377500 | 0.804316 | 2.290296e-49 | -8.615850e-47 |
| Msa0011960 | Msa1377500 | 0.802224 | 6.209964e-49 | -8.615850e-47 |
| Msa0020410 | Msa1377500 | 0.825736 | 3.983683e-54 | -8.615850e-47 |
| Msa0021510 | Msa1377500 | 0.811765 | 5.943445e-51 | -8.615850e-47 |
| Msa0025730 | Msa1377500 | 0.815203 | 1.042895e-51 | -8.615850e-47 |
| Msa0031340 | Msa1377500 | 0.821522 | 3.861207e-53 | -8.615850e-47 |
| Msa0033110 | Msa1377500 | 0.827628 | 1.408169e-54 | -8.615850e-47 |
| Msa0033260 | Msa1377500 | 0.823828 | 1.122485e-53 | -8.615850e-47 |
| Msa0037570 | Msa1377500 | -0.811006 | 8.686168e-51 | -8.615850e-47 |
| Msa0037880 | Msa1377500 | 0.822912 | 1.837718e-53 | -8.615850e-47 |
| Msa0043980 | Msa1377500 | 0.823674 | 1.219476e-53 | -8.615850e-47 |
| Msa0044000 | Msa1377500 | 0.814537 | 1.465112e-51 | -8.615850e-47 |
| Msa0044260 | Msa1377500 | 0.837109 | 6.309791e-57 | -8.615850e-47 |
| Msa0044330 | Msa1377500 | 0.845137 | 4.897356e-59 | -8.615850e-47 |
| Msa0068680 | Msa1377500 | 0.802492 | 5.467606e-49 | -8.615850e-47 |
| Msa0073170 | Msa1377500 | 0.836562 | 8.703032e-57 | -8.615850e-47 |
| Msa0079180 | Msa1377500 | 0.846770 | 1.763073e-59 | -8.615850e-47 |
| Msa0083280 | Msa1377500 | 0.820206 | 7.750709e-53 | -8.615850e-47 |
| Msa0084380 | Msa1377500 | 0.825285 | 5.096236e-54 | -8.615850e-47 |
| Msa0089820 | Msa1377500 | 0.809168 | 2.162032e-50 | -8.615850e-47 |
| Msa0090360 | Msa1377500 | 0.806388 | 8.429114e-50 | -8.615850e-47 |
| Msa0091410 | Msa1377500 | 0.824420 | 8.150641e-54 | -8.615850e-47 |
| Msa0104240 | Msa1377500 | 0.815380 | 9.520871e-52 | -8.615850e-47 |
| Msa0114060 | Msa1377500 | 0.822487 | 2.307843e-53 | -8.615850e-47 |
| Msa1346370 | Msa1377500 | 0.815337 | 9.734247e-52 | -8.615850e-47 |
| Msa1353470 | Msa1377500 | 0.813417 | 2.587551e-51 | -8.615850e-47 |
| Msa1353980 | Msa1377500 | 0.840501 | 8.372716e-58 | -8.615850e-47 |
| Msa1356440 | Msa1377500 | 0.820713 | 5.931774e-53 | -8.615850e-47 |
| Msa1358250 | Msa1377500 | 0.801552 | 8.532230e-49 | -8.615850e-47 |
| Msa1360440 | Msa1377500 | 0.804957 | 1.683228e-49 | -8.615850e-47 |
| Msa1364210 | Msa1377500 | 0.823449 | 1.376954e-53 | -8.615850e-47 |
| Msa1364730 | Msa1377500 | 0.809703 | 1.659686e-50 | -8.615850e-47 |
| Msa1370070 | Msa1377500 | -0.831502 | 1.609846e-55 | -8.615850e-47 |
| Msa1377500 | Msa1385460 | 0.802398 | 5.716521e-49 | -8.615850e-47 |
| Msa1377500 | Msa1392780 | 0.812255 | 4.648753e-51 | -8.615850e-47 |
| Msa1377500 | Msa1397120 | 0.804512 | 2.084935e-49 | -8.615850e-47 |
| Msa1377500 | Msa1400870 | -0.811355 | 7.297495e-51 | -8.615850e-47 |
| Msa1377500 | Msa1403340 | 0.816810 | 4.563315e-52 | -8.615850e-47 |
| Msa1377500 | Msa1403890 | 0.803261 | 3.792779e-49 | -8.615850e-47 |
| Msa1377500 | Msa1409880 | 0.810519 | 1.107359e-50 | -8.615850e-47 |
| Msa1377500 | Msa1411020 | 0.809533 | 1.805736e-50 | -8.615850e-47 |
| Msa1377500 | Msa1412530 | 0.805812 | 1.113914e-49 | -8.615850e-47 |
| Msa1377500 | Msa1412640 | 0.806005 | 1.014706e-49 | -8.615850e-47 |
| Msa1377500 | Msa1419870 | 0.804075 | 2.570684e-49 | -8.615850e-47 |
| Msa1377500 | Msa1424290 | 0.805796 | 1.122941e-49 | -8.615850e-47 |
| Msa1377500 | Msa1424450 | 0.817667 | 2.928036e-52 | -8.615850e-47 |
| Msa1377500 | Msa1427230 | 0.807655 | 4.545197e-50 | -8.615850e-47 |
| Msa1377500 | Msa1432420 | 0.804435 | 2.163741e-49 | -8.615850e-47 |
| Msa1377500 | Msa1434350 | 0.807510 | 4.880165e-50 | -8.615850e-47 |
| Msa1377500 | Msa1439320 | 0.810186 | 1.306209e-50 | -8.615850e-47 |
| Msa1377500 | Msa1449340 | -0.805748 | 1.149239e-49 | -8.615850e-47 |
| Msa1377500 | Msa1451160 | 0.831582 | 1.538703e-55 | -8.615850e-47 |
| Msa1377500 | Msa1454620 | 0.821436 | 4.041105e-53 | -8.615850e-47 |
| Msa1377500 | Msa1457920 | 0.825963 | 3.518931e-54 | -8.615850e-47 |
| Msa1377500 | Msa1461300 | 0.805145 | 1.537477e-49 | -8.615850e-47 |
| Msa1377500 | Msa1462290 | 0.825232 | 5.243244e-54 | -8.615850e-47 |
| Msa1377500 | Msa1463900 | 0.809797 | 1.584210e-50 | -8.615850e-47 |
| Msa1377500 | Msa1464810 | 0.800025 | 1.748934e-48 | -8.615850e-47 |
| Msa1377500 | Msa1466540 | 0.829979 | 3.802226e-55 | -8.615850e-47 |
| Msa0607050 | Msa1377500 | 0.826490 | 2.636068e-54 | -8.615850e-47 |
| Msa0610430 | Msa1377500 | 0.817920 | 2.567729e-52 | -8.615850e-47 |
| Msa0615710 | Msa1377500 | 0.819139 | 1.358537e-52 | -8.615850e-47 |
| Msa0617640 | Msa1377500 | 0.819801 | 9.597744e-53 | -8.615850e-47 |
| Msa0625720 | Msa1377500 | 0.813361 | 2.661670e-51 | -8.615850e-47 |
| Msa0626090 | Msa1377500 | 0.813595 | 2.364013e-51 | -8.615850e-47 |
| Msa0639310 | Msa1377500 | 0.804128 | 2.506824e-49 | -8.615850e-47 |
| Msa0647500 | Msa1377500 | 0.808562 | 2.914212e-50 | -8.615850e-47 |
| Msa0649490 | Msa1377500 | 0.861708 | 8.483109e-64 | -8.615850e-47 |
| Msa0661190 | Msa1377500 | -0.805490 | 1.301957e-49 | -8.615850e-47 |
| Msa0662500 | Msa1377500 | 0.801483 | 8.813019e-49 | -8.615850e-47 |
| Msa0663390 | Msa1377500 | 0.841547 | 4.446770e-58 | -8.615850e-47 |
| Msa0665860 | Msa1377500 | 0.805985 | 1.024899e-49 | -8.615850e-47 |
| Msa0672690 | Msa1377500 | 0.835340 | 1.776332e-56 | -8.615850e-47 |
| Msa0682840 | Msa1377500 | 0.802551 | 5.317702e-49 | -8.615850e-47 |
| Msa0688480 | Msa1377500 | 0.811821 | 5.779273e-51 | -8.615850e-47 |
| Msa0689260 | Msa1377500 | 0.803243 | 3.825981e-49 | -8.615850e-47 |
| Msa0690150 | Msa1377500 | 0.809253 | 2.072813e-50 | -8.615850e-47 |
| Msa0691900 | Msa1377500 | 0.801078 | 1.066635e-48 | -8.615850e-47 |
| Msa0707250 | Msa1377500 | 0.816243 | 6.113597e-52 | -8.615850e-47 |
| Msa0709400 | Msa1377500 | 0.856736 | 2.629967e-62 | -8.615850e-47 |
| Msa0711100 | Msa1377500 | 0.804611 | 1.988311e-49 | -8.615850e-47 |
| Msa0711780 | Msa1377500 | 0.800778 | 1.228509e-48 | -8.615850e-47 |
| Msa0715700 | Msa1377500 | 0.801570 | 8.461504e-49 | -8.615850e-47 |
| Msa0720820 | Msa1377500 | 0.806781 | 6.962932e-50 | -8.615850e-47 |
| Msa0740510 | Msa1377500 | 0.807276 | 5.471492e-50 | -8.615850e-47 |
| Msa0740520 | Msa1377500 | 0.829121 | 6.145117e-55 | -8.615850e-47 |
| Msa0750170 | Msa1377500 | 0.808342 | 3.245967e-50 | -8.615850e-47 |
| Msa0761940 | Msa1377500 | 0.812294 | 4.558871e-51 | -8.615850e-47 |
| Msa0790660 | Msa1377500 | -0.814597 | 1.420395e-51 | -8.615850e-47 |
| Msa0794670 | Msa1377500 | 0.805627 | 1.218266e-49 | -8.615850e-47 |
| Msa0794730 | Msa1377500 | 0.810206 | 1.293612e-50 | -8.615850e-47 |
| Msa0796700 | Msa1377500 | 0.827550 | 1.470408e-54 | -8.615850e-47 |
| Msa0803890 | Msa1377500 | 0.843502 | 1.347352e-58 | -8.615850e-47 |
| Msa0804230 | Msa1377500 | 0.819831 | 9.445530e-53 | -8.615850e-47 |
| Msa0808080 | Msa1377500 | 0.810720 | 1.001947e-50 | -8.615850e-47 |
| Msa0808270 | Msa1377500 | 0.805754 | 1.146101e-49 | -8.615850e-47 |
| Msa0820770 | Msa1377500 | 0.812764 | 3.596938e-51 | -8.615850e-47 |
| Msa0820850 | Msa1377500 | 0.821501 | 3.905177e-53 | -8.615850e-47 |
| Msa0827280 | Msa1377500 | 0.806484 | 8.043862e-50 | -8.615850e-47 |
| Msa0832150 | Msa1377500 | 0.802933 | 4.434221e-49 | -8.615850e-47 |
| Msa0841940 | Msa1377500 | 0.809845 | 1.546932e-50 | -8.615850e-47 |
| Msa0127800 | Msa1377500 | 0.806299 | 8.801866e-50 | -8.615850e-47 |
| Msa0136070 | Msa1377500 | 0.821539 | 3.826307e-53 | -8.615850e-47 |
| Msa0136100 | Msa1377500 | 0.804606 | 1.993129e-49 | -8.615850e-47 |
| Msa0137100 | Msa1377500 | 0.801549 | 8.543546e-49 | -8.615850e-47 |
| Msa0140820 | Msa1377500 | 0.804807 | 1.809553e-49 | -8.615850e-47 |
| Msa0147250 | Msa1377500 | 0.839819 | 1.261006e-57 | -8.615850e-47 |
| Msa0150800 | Msa1377500 | 0.812340 | 4.453026e-51 | -8.615850e-47 |
| Msa0157100 | Msa1377500 | 0.805610 | 1.228244e-49 | -8.615850e-47 |
| Msa0170220 | Msa1377500 | 0.805878 | 1.079330e-49 | -8.615850e-47 |
| Msa0171760 | Msa1377500 | 0.805364 | 1.383178e-49 | -8.615850e-47 |
| Msa0182690 | Msa1377500 | 0.835125 | 2.013366e-56 | -8.615850e-47 |
| Msa0191050 | Msa1377500 | 0.809567 | 1.775071e-50 | -8.615850e-47 |
| Msa0197660 | Msa1377500 | 0.800406 | 1.462915e-48 | -8.615850e-47 |
| Msa0211150 | Msa1377500 | 0.834133 | 3.575556e-56 | -8.615850e-47 |
| Msa0217680 | Msa1377500 | 0.835064 | 2.085897e-56 | -8.615850e-47 |
| Msa0220580 | Msa1377500 | 0.824361 | 8.413293e-54 | -8.615850e-47 |
| Msa0222620 | Msa1377500 | 0.810787 | 9.688821e-51 | -8.615850e-47 |
| Msa0223080 | Msa1377500 | 0.804499 | 2.097665e-49 | -8.615850e-47 |
| Msa0228070 | Msa1377500 | 0.802789 | 4.749074e-49 | -8.615850e-47 |
| Msa0233350 | Msa1377500 | 0.805966 | 1.033918e-49 | -8.615850e-47 |
| Msa1237940 | Msa1377500 | 0.802631 | 5.119958e-49 | -8.615850e-47 |
| Msa1239910 | Msa1377500 | 0.818959 | 1.492924e-52 | -8.615850e-47 |
| Msa1244600 | Msa1377500 | 0.819101 | 1.385731e-52 | -8.615850e-47 |
| Msa1246510 | Msa1377500 | 0.808347 | 3.238402e-50 | -8.615850e-47 |
| Msa1251730 | Msa1377500 | 0.824928 | 6.188710e-54 | -8.615850e-47 |
| Msa1253020 | Msa1377500 | 0.809928 | 1.484512e-50 | -8.615850e-47 |
| Msa1254730 | Msa1377500 | 0.833034 | 6.724790e-56 | -8.615850e-47 |
| Msa1259590 | Msa1377500 | -0.826264 | 2.984625e-54 | -8.615850e-47 |
| Msa1277660 | Msa1377500 | 0.803127 | 4.042433e-49 | -8.615850e-47 |
| Msa1287460 | Msa1377500 | 0.802020 | 6.839530e-49 | -8.615850e-47 |
| Msa1294120 | Msa1377500 | 0.812034 | 5.193720e-51 | -8.615850e-47 |
| Msa1294820 | Msa1377500 | 0.819000 | 1.461447e-52 | -8.615850e-47 |
| Msa1305190 | Msa1377500 | 0.803576 | 3.263600e-49 | -8.615850e-47 |
| Msa1305340 | Msa1377500 | 0.817672 | 2.920310e-52 | -8.615850e-47 |
| Msa1305660 | Msa1377500 | 0.809156 | 2.174864e-50 | -8.615850e-47 |
| Msa1313140 | Msa1377500 | 0.802319 | 5.936311e-49 | -8.615850e-47 |
| Msa1315750 | Msa1377500 | 0.802476 | 5.510256e-49 | -8.615850e-47 |
| Msa1327680 | Msa1377500 | 0.802906 | 4.492316e-49 | -8.615850e-47 |
| Msa1331000 | Msa1377500 | 0.807281 | 5.456442e-50 | -8.615850e-47 |
| Msa1332040 | Msa1377500 | -0.821465 | 3.980681e-53 | -8.615850e-47 |
| Msa1332870 | Msa1377500 | -0.800854 | 1.185284e-48 | -8.615850e-47 |
| Msa0366890 | Msa1377500 | 0.803213 | 3.880353e-49 | -8.615850e-47 |
| Msa0376310 | Msa1377500 | 0.816880 | 4.402874e-52 | -8.615850e-47 |
| Msa0383800 | Msa1377500 | 0.821588 | 3.728865e-53 | -8.615850e-47 |
| Msa0385580 | Msa1377500 | 0.810399 | 1.175329e-50 | -8.615850e-47 |
| Msa0388700 | Msa1377500 | 0.803668 | 3.122772e-49 | -8.615850e-47 |
| Msa0388950 | Msa1377500 | 0.800352 | 1.500395e-48 | -8.615850e-47 |
| Msa0395820 | Msa1377500 | 0.806004 | 1.015519e-49 | -8.615850e-47 |
| Msa0405570 | Msa1377500 | 0.808856 | 2.521904e-50 | -8.615850e-47 |
| Msa0412840 | Msa1377500 | 0.814223 | 1.718911e-51 | -8.615850e-47 |
| Msa0416300 | Msa1377500 | 0.802674 | 5.015769e-49 | -8.615850e-47 |
| Msa0434180 | Msa1377500 | 0.801059 | 1.076674e-48 | -8.615850e-47 |
| Msa0436490 | Msa1377500 | -0.807364 | 5.241110e-50 | -8.615850e-47 |
| Msa0452710 | Msa1377500 | 0.807360 | 5.250787e-50 | -8.615850e-47 |
| Msa0454360 | Msa1377500 | 0.806556 | 7.768172e-50 | -8.615850e-47 |
| Msa0455040 | Msa1377500 | 0.806279 | 8.885305e-50 | -8.615850e-47 |
| Msa0467380 | Msa1377500 | 0.801106 | 1.052854e-48 | -8.615850e-47 |
| Msa0473190 | Msa1377500 | 0.823942 | 1.055630e-53 | -8.615850e-47 |
| Msa0477130 | Msa1377500 | -0.809063 | 2.276467e-50 | -8.615850e-47 |
| Msa0479660 | Msa1377500 | 0.812235 | 4.694762e-51 | -8.615850e-47 |
| Msa0479970 | Msa1377500 | 0.809371 | 1.956103e-50 | -8.615850e-47 |
| Msa0481530 | Msa1377500 | 0.842998 | 1.835460e-58 | -8.615850e-47 |
| Msa0993290 | Msa1377500 | 0.803773 | 2.971018e-49 | -8.615850e-47 |
| Msa0993330 | Msa1377500 | 0.830128 | 3.496067e-55 | -8.615850e-47 |
| Msa0993600 | Msa1377500 | 0.805920 | 1.057675e-49 | -8.615850e-47 |
| Msa0997970 | Msa1377500 | 0.802564 | 5.285141e-49 | -8.615850e-47 |
| Msa1001390 | Msa1377500 | 0.801448 | 8.961295e-49 | -8.615850e-47 |
| Msa1002850 | Msa1377500 | 0.816447 | 5.503037e-52 | -8.615850e-47 |
| Msa1006840 | Msa1377500 | 0.811034 | 8.564241e-51 | -8.615850e-47 |
| Msa1012320 | Msa1377500 | 0.801393 | 9.197949e-49 | -8.615850e-47 |
| Msa1012830 | Msa1377500 | 0.814294 | 1.658006e-51 | -8.615850e-47 |
| Msa1013400 | Msa1377500 | 0.840274 | 9.596214e-58 | -8.615850e-47 |
| Msa1024750 | Msa1377500 | 0.810576 | 1.076339e-50 | -8.615850e-47 |
| Msa1035310 | Msa1377500 | 0.800718 | 1.263631e-48 | -8.615850e-47 |
| Msa1035480 | Msa1377500 | 0.857109 | 2.042218e-62 | -8.615850e-47 |
| Msa1036610 | Msa1377500 | 0.803107 | 4.082105e-49 | -8.615850e-47 |
| Msa1040400 | Msa1377500 | 0.824341 | 8.508704e-54 | -8.615850e-47 |
| Msa1046060 | Msa1377500 | 0.804731 | 1.876648e-49 | -8.615850e-47 |
| Msa1048280 | Msa1377500 | -0.801805 | 7.570553e-49 | -8.615850e-47 |
| Msa1051880 | Msa1377500 | 0.808806 | 2.584495e-50 | -8.615850e-47 |
| Msa1063510 | Msa1377500 | 0.850360 | 1.785700e-60 | -8.615850e-47 |
| Msa1075540 | Msa1377500 | 0.806995 | 6.273283e-50 | -8.615850e-47 |
| Msa1077030 | Msa1377500 | 0.802485 | 5.486592e-49 | -8.615850e-47 |
| Msa1078170 | Msa1377500 | 0.826372 | 2.813392e-54 | -8.615850e-47 |
| Msa1081910 | Msa1377500 | 0.812903 | 3.354370e-51 | -8.615850e-47 |
| Msa1081930 | Msa1377500 | 0.822634 | 2.132783e-53 | -8.615850e-47 |
| Msa1081980 | Msa1377500 | 0.812790 | 3.551623e-51 | -8.615850e-47 |
| Msa1082500 | Msa1377500 | 0.804024 | 2.633816e-49 | -8.615850e-47 |
| Msa1085800 | Msa1377500 | 0.812550 | 4.006810e-51 | -8.615850e-47 |
| Msa1089320 | Msa1377500 | 0.825176 | 5.407532e-54 | -8.615850e-47 |
| Msa1091940 | Msa1377500 | 0.802777 | 4.775168e-49 | -8.615850e-47 |
| Msa1093530 | Msa1377500 | 0.836799 | 7.572970e-57 | -8.615850e-47 |
| Msa1100050 | Msa1377500 | 0.823303 | 1.489570e-53 | -8.615850e-47 |
| Msa0241390 | Msa1377500 | 0.814163 | 1.772424e-51 | -8.615850e-47 |
| Msa0257460 | Msa1377500 | 0.801314 | 9.545802e-49 | -8.615850e-47 |
| Msa0257500 | Msa1377500 | 0.807968 | 3.900815e-50 | -8.615850e-47 |
| Msa0260680 | Msa1377500 | 0.813587 | 2.372977e-51 | -8.615850e-47 |
| Msa0264150 | Msa1377500 | 0.824268 | 8.849182e-54 | -8.615850e-47 |
| Msa0270320 | Msa1377500 | 0.819611 | 1.060486e-52 | -8.615850e-47 |
| Msa0271530 | Msa1377500 | 0.816953 | 4.239236e-52 | -8.615850e-47 |
| Msa0279240 | Msa1377500 | 0.813762 | 2.171996e-51 | -8.615850e-47 |
| Msa0280090 | Msa1377500 | 0.838050 | 3.620292e-57 | -8.615850e-47 |
| Msa0287410 | Msa1377500 | 0.817077 | 3.975686e-52 | -8.615850e-47 |
| Msa0288100 | Msa1377500 | 0.815405 | 9.402302e-52 | -8.615850e-47 |
| Msa0291500 | Msa1377500 | 0.814821 | 1.267306e-51 | -8.615850e-47 |
| Msa0299870 | Msa1377500 | 0.801144 | 1.034042e-48 | -8.615850e-47 |
| Msa0302160 | Msa1377500 | 0.804470 | 2.127683e-49 | -8.615850e-47 |
| Msa0309750 | Msa1377500 | 0.811788 | 5.875761e-51 | -8.615850e-47 |
| Msa0309770 | Msa1377500 | 0.812216 | 4.740460e-51 | -8.615850e-47 |
| Msa0318980 | Msa1377500 | 0.820581 | 6.360421e-53 | -8.615850e-47 |
| Msa0326480 | Msa1377500 | 0.813934 | 1.990191e-51 | -8.615850e-47 |
| Msa0329350 | Msa1377500 | 0.806831 | 6.794933e-50 | -8.615850e-47 |
| Msa0334550 | Msa1377500 | 0.830327 | 3.125204e-55 | -8.615850e-47 |
| Msa0336420 | Msa1377500 | 0.800556 | 1.363546e-48 | -8.615850e-47 |
| Msa0337620 | Msa1377500 | 0.802437 | 5.613291e-49 | -8.615850e-47 |
| Msa0339490 | Msa1377500 | 0.801658 | 8.116487e-49 | -8.615850e-47 |
| Msa0341050 | Msa1377500 | 0.848052 | 7.836326e-60 | -8.615850e-47 |
| Msa0357900 | Msa1377500 | 0.816174 | 6.334282e-52 | -8.615850e-47 |
| Msa0359030 | Msa1377500 | 0.832608 | 8.576688e-56 | -8.615850e-47 |
| Msa1109680 | Msa1377500 | 0.837028 | 6.617693e-57 | -8.615850e-47 |
| Msa1119540 | Msa1377500 | 0.804229 | 2.388049e-49 | -8.615850e-47 |
| Msa1123380 | Msa1377500 | 0.818559 | 1.840533e-52 | -8.615850e-47 |
| Msa1124960 | Msa1377500 | 0.862790 | 3.948427e-64 | -8.615850e-47 |
| Msa1125760 | Msa1377500 | 0.800060 | 1.720509e-48 | -8.615850e-47 |
| Msa1131220 | Msa1377500 | 0.802519 | 5.397461e-49 | -8.615850e-47 |
| Msa1142020 | Msa1377500 | 0.817961 | 2.513500e-52 | -8.615850e-47 |
| Msa1147970 | Msa1377500 | 0.831443 | 1.664535e-55 | -8.615850e-47 |
| Msa1154280 | Msa1377500 | 0.822896 | 1.853576e-53 | -8.615850e-47 |
| Msa1157930 | Msa1377500 | -0.815242 | 1.021864e-51 | -8.615850e-47 |
| Msa1160590 | Msa1377500 | 0.816646 | 4.968074e-52 | -8.615850e-47 |
| Msa1162780 | Msa1377500 | 0.806936 | 6.458027e-50 | -8.615850e-47 |
| Msa1167340 | Msa1377500 | 0.848123 | 7.489726e-60 | -8.615850e-47 |
| Msa1170410 | Msa1377500 | 0.805961 | 1.036760e-49 | -8.615850e-47 |
| Msa1172400 | Msa1377500 | 0.826568 | 2.525940e-54 | -8.615850e-47 |
| Msa1174040 | Msa1377500 | 0.840757 | 7.173817e-58 | -8.615850e-47 |
| Msa1181250 | Msa1377500 | 0.842557 | 2.404453e-58 | -8.615850e-47 |
| Msa1181330 | Msa1377500 | 0.834073 | 3.699741e-56 | -8.615850e-47 |
| Msa1181850 | Msa1377500 | 0.804179 | 2.445559e-49 | -8.615850e-47 |
| Msa1181860 | Msa1377500 | 0.808422 | 3.121909e-50 | -8.615850e-47 |
| Msa1181910 | Msa1377500 | 0.834013 | 3.830088e-56 | -8.615850e-47 |
| Msa1189070 | Msa1377500 | 0.802094 | 6.604298e-49 | -8.615850e-47 |
| Msa1193290 | Msa1377500 | 0.811678 | 6.207954e-51 | -8.615850e-47 |
| Msa1204530 | Msa1377500 | 0.807603 | 4.662856e-50 | -8.615850e-47 |
| Msa1207270 | Msa1377500 | 0.801014 | 1.099374e-48 | -8.615850e-47 |
| Msa1218600 | Msa1377500 | 0.820188 | 7.825733e-53 | -8.615850e-47 |
| Msa1221050 | Msa1377500 | 0.806016 | 1.009525e-49 | -8.615850e-47 |
| Msa0487800 | Msa1377500 | 0.805406 | 1.355815e-49 | -8.615850e-47 |
| Msa0493480 | Msa1377500 | 0.809368 | 1.958539e-50 | -8.615850e-47 |
| Msa0498650 | Msa1377500 | 0.825876 | 3.690235e-54 | -8.615850e-47 |
| Msa0512750 | Msa1377500 | 0.820277 | 7.467332e-53 | -8.615850e-47 |
| Msa0517110 | Msa1377500 | 0.806483 | 8.046243e-50 | -8.615850e-47 |
| Msa0529890 | Msa1377500 | 0.816641 | 4.980413e-52 | -8.615850e-47 |
| Msa0532980 | Msa1377500 | 0.803313 | 3.700601e-49 | -8.615850e-47 |
| Msa0534910 | Msa1377500 | 0.807838 | 4.157507e-50 | -8.615850e-47 |
| Msa0541130 | Msa1377500 | 0.805098 | 1.573076e-49 | -8.615850e-47 |
| Msa0544180 | Msa1377500 | 0.802717 | 4.914589e-49 | -8.615850e-47 |
| Msa0547320 | Msa1377500 | 0.831215 | 1.893542e-55 | -8.615850e-47 |
| Msa0548240 | Msa1377500 | 0.839666 | 1.382639e-57 | -8.615850e-47 |
| Msa0572840 | Msa1377500 | 0.803739 | 3.019444e-49 | -8.615850e-47 |
| Msa0585230 | Msa1377500 | 0.807130 | 5.875663e-50 | -8.615850e-47 |
| Msa0585560 | Msa1377500 | 0.826783 | 2.244791e-54 | -8.615850e-47 |
| Msa0587910 | Msa1377500 | 0.806532 | 7.858046e-50 | -8.615850e-47 |
| Msa0592440 | Msa1377500 | 0.808819 | 2.567859e-50 | -8.615850e-47 |
| Msa0597330 | Msa1377500 | 0.803733 | 3.027161e-49 | -8.615850e-47 |
| Msa0602390 | Msa1377500 | 0.820118 | 8.122279e-53 | -8.615850e-47 |
| Msa0860030 | Msa1377500 | -0.805209 | 1.490449e-49 | -8.615850e-47 |
| Msa0861090 | Msa1377500 | 0.806445 | 8.197754e-50 | -8.615850e-47 |
| Msa0861130 | Msa1377500 | 0.818658 | 1.747355e-52 | -8.615850e-47 |
| Msa0866550 | Msa1377500 | 0.804708 | 1.897076e-49 | -8.615850e-47 |
| Msa0871270 | Msa1377500 | 0.831200 | 1.910512e-55 | -8.615850e-47 |
| Msa0876200 | Msa1377500 | 0.801286 | 9.673157e-49 | -8.615850e-47 |
| Msa0876810 | Msa1377500 | 0.801854 | 7.397348e-49 | -8.615850e-47 |
| Msa0880020 | Msa1377500 | 0.873375 | 1.543768e-67 | -8.615850e-47 |
| Msa0893800 | Msa1377500 | 0.808726 | 2.687691e-50 | -8.615850e-47 |
| Msa0897080 | Msa1377500 | 0.803327 | 3.676233e-49 | -8.615850e-47 |
| Msa0902760 | Msa1377500 | 0.837042 | 6.562139e-57 | -8.615850e-47 |
| Msa0928130 | Msa1377500 | 0.804496 | 2.100722e-49 | -8.615850e-47 |
| Msa0931520 | Msa1377500 | 0.832259 | 1.046948e-55 | -8.615850e-47 |
| Msa0935670 | Msa1377500 | 0.811125 | 8.185533e-51 | -8.615850e-47 |
| Msa0938220 | Msa1377500 | 0.832751 | 7.907174e-56 | -8.615850e-47 |
| Msa0947660 | Msa1377500 | 0.819737 | 9.923521e-53 | -8.615850e-47 |
| Msa0963270 | Msa1377500 | 0.834636 | 2.673334e-56 | -8.615850e-47 |
| Msa0964310 | Msa1377500 | 0.822606 | 2.164922e-53 | -8.615850e-47 |
| Msa0969810 | Msa1377500 | 0.804319 | 2.287434e-49 | -8.615850e-47 |
| Msa0970030 | Msa1377500 | 0.820930 | 5.288264e-53 | -8.615850e-47 |
| Msa0975340 | Msa1377500 | 0.811466 | 6.903369e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377500 | MtrunA17_Chr7g0260991 | 98.551 | 138 | 2 | 0 | 21 | 158 | 1 | 138 | 2.48e-100 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377500 | AT1G48160.1 | 70.270 | 111 | 33 | 0 | 21 | 131 | 1 | 111 | 5.08e-57 | 175 |
| Msa1377500 | AT1G48160.2 | 70.270 | 111 | 33 | 0 | 21 | 131 | 1 | 111 | 5.08e-57 | 175 |
Find 59 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTATATCAACTCGATTT+TGG | 0.174175 | tig0019933:+42991 | None:intergenic |
| TGGTCCTTCCATGGTGTTTA+GGG | 0.204157 | tig0019933:+43497 | None:intergenic |
| TTGCCCAAGCCAAGCAATTT+AGG | 0.210370 | tig0019933:-43070 | Msa1377500:three_prime_UTR |
| AACCCTACTTGTGTCGAAAT+TGG | 0.211223 | tig0019933:-45744 | Msa1377500:CDS |
| TACTGGTGCCTCTCCGAGTA+TGG | 0.225661 | tig0019933:-43359 | Msa1377500:three_prime_UTR |
| TGATGCAGTCTCCTGCTTCT+TGG | 0.227052 | tig0019933:+43477 | None:intergenic |
| TTGGTCCTTCCATGGTGTTT+AGG | 0.258012 | tig0019933:+43496 | None:intergenic |
| GGTACAACTTCAATTTAGTT+AGG | 0.333994 | tig0019933:+43265 | None:intergenic |
| TCATGCAAAGAGGACGAGTT+AGG | 0.334941 | tig0019933:-45577 | Msa1377500:CDS |
| ACCCTACTTGTGTCGAAATT+GGG | 0.338535 | tig0019933:-45743 | Msa1377500:CDS |
| GCTGGACCTTCCAACAAATC+TGG | 0.347799 | tig0019933:-43439 | Msa1377500:CDS |
| GAAGTTGTACCACTCGGAAA+TGG | 0.352593 | tig0019933:-43253 | Msa1377500:three_prime_UTR |
| CTTGGTCGTCCCTACTGTTA+AGG | 0.368262 | tig0019933:+43043 | None:intergenic |
| CGTGTTTCTTCTTGCAACTT+TGG | 0.369539 | tig0019933:+43143 | None:intergenic |
| TCCACCTTTCCCAGATTTGT+TGG | 0.371350 | tig0019933:+43429 | None:intergenic |
| GCAACCTAAATTGCTTGGCT+TGG | 0.408185 | tig0019933:+43066 | None:intergenic |
| CCTGCTTCTTGGTCCTTCCA+TGG | 0.417818 | tig0019933:+43488 | None:intergenic |
| CAACCTAAATTGCTTGGCTT+GGG | 0.423585 | tig0019933:+43067 | None:intergenic |
| GTTGCTGAAGGAAGACGAAT+TGG | 0.430316 | tig0019933:-45786 | Msa1377500:CDS |
| TTGGTCGTCCCTACTGTTAA+GGG | 0.431545 | tig0019933:+43044 | None:intergenic |
| TGTTTATTACAGTTTCATAC+TGG | 0.436879 | tig0019933:-43321 | Msa1377500:three_prime_UTR |
| AAGAAGAAACACGTCACGTT+TGG | 0.445127 | tig0019933:-43133 | Msa1377500:three_prime_UTR |
| CCTTTCCCAGATTTGTTGGA+AGG | 0.448852 | tig0019933:+43433 | None:intergenic |
| ACGATCCATTTCTTTATGCT+TGG | 0.449508 | tig0019933:+45843 | None:intergenic |
| TCAACAACAACTGCAACTGC+TGG | 0.454659 | tig0019933:-43457 | Msa1377500:CDS |
| AATTACCAAGCATAAAGAAA+TGG | 0.459331 | tig0019933:-45848 | Msa1377500:CDS |
| ATTAAACTTACTGGAAGCTA+TGG | 0.462420 | tig0019933:+45514 | None:intergenic |
| AAGTTGTACCACTCGGAAAT+GGG | 0.471619 | tig0019933:-43252 | Msa1377500:three_prime_UTR |
| CATGCAAAGAGGACGAGTTA+GGG | 0.478286 | tig0019933:-45576 | Msa1377500:CDS |
| TAAGGGCAACCTAAATTGCT+TGG | 0.483827 | tig0019933:+43061 | None:intergenic |
| TTAACTACCTCGATTGCAAA+AGG | 0.499386 | tig0019933:+45696 | None:intergenic |
| CTGGACCTTCCAACAAATCT+GGG | 0.500340 | tig0019933:-43438 | Msa1377500:CDS |
| CCCCAATTTCGACACAAGTA+GGG | 0.516511 | tig0019933:+45742 | None:intergenic |
| CCATGGAAGGACCAAGAAGC+AGG | 0.522661 | tig0019933:-43488 | Msa1377500:CDS |
| CCCTACTTGTGTCGAAATTG+GGG | 0.523869 | tig0019933:-45742 | Msa1377500:CDS |
| AATGTTACGCGTTGCAGAGA+TGG | 0.526719 | tig0019933:-43521 | Msa1377500:CDS |
| TTTAGGTTGCCCTTAACAGT+AGG | 0.533638 | tig0019933:-43053 | Msa1377500:three_prime_UTR |
| AACTTACTGGAAGCTATGGA+TGG | 0.533770 | tig0019933:+45518 | None:intergenic |
| TCCCCAATTTCGACACAAGT+AGG | 0.535068 | tig0019933:+45741 | None:intergenic |
| ACTGGTGCCTCTCCGAGTAT+GGG | 0.537725 | tig0019933:-43358 | Msa1377500:three_prime_UTR |
| TGATTTCACAAAGTGTAAGA+TGG | 0.554466 | tig0019933:-45877 | Msa1377500:CDS |
| CCTCGTGATTTCATGCAAAG+AGG | 0.566493 | tig0019933:-45587 | Msa1377500:CDS |
| TCCAACAAATCTGGGAAAGG+TGG | 0.573312 | tig0019933:-43430 | Msa1377500:CDS |
| TTAGGTTGCCCTTAACAGTA+GGG | 0.588376 | tig0019933:-43052 | Msa1377500:three_prime_UTR |
| AGAAACACGTCACGTTTGGA+AGG | 0.591080 | tig0019933:-43129 | Msa1377500:three_prime_UTR |
| TTCACAAAGTGTAAGATGGA+AGG | 0.594062 | tig0019933:-45873 | Msa1377500:CDS |
| GTCTTGTAGTAGCAAAACCT+TGG | 0.597031 | tig0019933:+43025 | None:intergenic |
| AATAATAAGAGAGATCTTCG+TGG | 0.600675 | tig0019933:+42964 | None:intergenic |
| CCTTCCAACAAATCTGGGAA+AGG | 0.605602 | tig0019933:-43433 | Msa1377500:CDS |
| TTGTTGATCACAGCTTGACA+AGG | 0.619387 | tig0019933:-45615 | Msa1377500:intron |
| TGGTCCCTAAACACCATGGA+AGG | 0.619588 | tig0019933:-43501 | Msa1377500:CDS |
| CCTCTTTGCATGAAATCACG+AGG | 0.620436 | tig0019933:+45587 | None:intergenic |
| ATAAGAGAGATCTTCGTGGT+GGG | 0.640966 | tig0019933:+42968 | None:intergenic |
| AATAAGAGAGATCTTCGTGG+TGG | 0.641342 | tig0019933:+42967 | None:intergenic |
| TAAATTGAAGTTGTACCACT+CGG | 0.647405 | tig0019933:-43259 | Msa1377500:three_prime_UTR |
| GAGATGGTCCCTAAACACCA+TGG | 0.690946 | tig0019933:-43505 | Msa1377500:CDS |
| CTCTTTGCATGAAATCACGA+GGG | 0.694337 | tig0019933:+45588 | None:intergenic |
| CTTAACAGTAGGGACGACCA+AGG | 0.702153 | tig0019933:-43042 | Msa1377500:three_prime_UTR |
| GCGCAAAACCCATTTCCGAG+TGG | 0.747399 | tig0019933:+43244 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAATATAGATTTAAAAA+GGG | + | tig0019933:44220-44239 | None:intergenic | 10.0% |
| !!! | TTTTGAATATAGATTTAAAA+AGG | + | tig0019933:44221-44240 | None:intergenic | 10.0% |
| !! | AATTAATTATTAGAGAAAAA+GGG | + | tig0019933:44682-44701 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTATTTTTTTGAG+GGG | - | tig0019933:45921-45940 | Msa1377500:CDS | 10.0% |
| !! | GTTATAATTATTAAACTTAC+TGG | + | tig0019933:43363-43382 | None:intergenic | 15.0% |
| !! | TACTTTCATGTTAAATAAAA+TGG | + | tig0019933:43952-43971 | None:intergenic | 15.0% |
| !! | CAATTAATTATTAGAGAAAA+AGG | + | tig0019933:44683-44702 | None:intergenic | 15.0% |
| !!! | ATAACACATTTTATGGAAAT+GGG | + | tig0019933:43584-43603 | None:intergenic | 20.0% |
| !!! | TATAACACATTTTATGGAAA+TGG | + | tig0019933:43585-43604 | None:intergenic | 20.0% |
| !!! | CTTATAATATTCCACTTTTA+TGG | - | tig0019933:43821-43840 | Msa1377500:intron | 20.0% |
| !! | TTCTTTCTTAGAAATGAAAT+TGG | - | tig0019933:44062-44081 | Msa1377500:intron | 20.0% |
| !!! | TTACAAATTCAAGTTGATTA+AGG | - | tig0019933:44281-44300 | Msa1377500:intron | 20.0% |
| !! | AATGGTAAAGGTTAAAAAAT+GGG | - | tig0019933:44528-44547 | Msa1377500:intron | 20.0% |
| !! | ATTAATTGTAAGATCTGAAA+TGG | - | tig0019933:44695-44714 | Msa1377500:intron | 20.0% |
| !! | ACCATATGATAATATAACAT+TGG | - | tig0019933:44759-44778 | Msa1377500:intron | 20.0% |
| !!! | TTATGATAGCTTATTTCTTA+TGG | - | tig0019933:45146-45165 | Msa1377500:intron | 20.0% |
| !!! | ATATTATATCAACTCGATTT+TGG | + | tig0019933:45877-45896 | None:intergenic | 20.0% |
| ! | AATTACCAAGCATAAAGAAA+TGG | - | tig0019933:43017-43036 | Msa1377500:three_prime_UTR | 25.0% |
| !!! | TTTTGGAATTGATGTAAACA+GGG | + | tig0019933:43054-43073 | None:intergenic | 25.0% |
| !!! | TTTTTGGAATTGATGTAAAC+AGG | + | tig0019933:43055-43074 | None:intergenic | 25.0% |
| ! | TAATATAGTTCTTAGCTATC+TGG | - | tig0019933:43427-43446 | Msa1377500:CDS | 25.0% |
| ! | AATATAGTTCTTAGCTATCT+GGG | - | tig0019933:43428-43447 | Msa1377500:CDS | 25.0% |
| !! | TAACACATTTTATGGAAATG+GGG | + | tig0019933:43583-43602 | None:intergenic | 25.0% |
| !! | TCTGGTTATAACACATTTTA+TGG | + | tig0019933:43591-43610 | None:intergenic | 25.0% |
| !! | TCACTTATAAGTTCTAATTG+TGG | - | tig0019933:43873-43892 | Msa1377500:intron | 25.0% |
| !! | TTATAAGTTCTAATTGTGGA+TGG | - | tig0019933:43877-43896 | Msa1377500:intron | 25.0% |
| !!! | AATTAATGATTTGCTCACAT+AGG | - | tig0019933:43988-44007 | Msa1377500:intron | 25.0% |
| ! | TGATCAACATAGAAATATGT+AGG | - | tig0019933:44145-44164 | Msa1377500:intron | 25.0% |
| !! | ATGTAGGAACTACATATTTT+TGG | - | tig0019933:44161-44180 | Msa1377500:intron | 25.0% |
| !!! | ATGCTACTTTAGTTAAAACA+AGG | + | tig0019933:44315-44334 | None:intergenic | 25.0% |
| ! | GAATGGTAAAGGTTAAAAAA+TGG | - | tig0019933:44527-44546 | Msa1377500:intron | 25.0% |
| !!! | AACTACTTTAGAGTTTGATA+AGG | + | tig0019933:44721-44740 | None:intergenic | 25.0% |
| ! | GCCAATGTTATATTATCATA+TGG | + | tig0019933:44763-44782 | None:intergenic | 25.0% |
| ! | AAAAGAATAGCATAATCTTG+TGG | + | tig0019933:44785-44804 | None:intergenic | 25.0% |
| ! | AGACCATGATAATATAACAT+TGG | - | tig0019933:44808-44827 | Msa1377500:intron | 25.0% |
| ! | AAAAGAATAGCATAATCTTG+TGG | + | tig0019933:44785-44804 | None:intergenic | 25.0% |
| ! | TATATTGTTATGATTTCCAG+CGG | + | tig0019933:45085-45104 | None:intergenic | 25.0% |
| ! | AATATCATAGATGATCTCTT+TGG | + | tig0019933:45121-45140 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTATGTCTTTGC+AGG | - | tig0019933:45312-45331 | Msa1377500:intron | 25.0% |
| ! | TGTTTATTACAGTTTCATAC+TGG | - | tig0019933:45544-45563 | Msa1377500:CDS | 25.0% |
| TGATTTCACAAAGTGTAAGA+TGG | - | tig0019933:42988-43007 | Msa1377500:three_prime_UTR | 30.0% | |
| ATTAAACTTACTGGAAGCTA+TGG | + | tig0019933:43354-43373 | None:intergenic | 30.0% | |
| TTGTATCATCTGATTAGTAC+CGG | - | tig0019933:43455-43474 | Msa1377500:CDS | 30.0% | |
| TATCTAAATACCATAAGGTC+CGG | + | tig0019933:43477-43496 | None:intergenic | 30.0% | |
| CCAACTATCTAAATACCATA+AGG | + | tig0019933:43482-43501 | None:intergenic | 30.0% | |
| CCTTATGGTATTTAGATAGT+TGG | - | tig0019933:43479-43498 | Msa1377500:CDS | 30.0% | |
| ! | AAGAGATACTTGCTTTAAGT+TGG | - | tig0019933:43737-43756 | Msa1377500:intron | 30.0% |
| ! | AGAGATACTTGCTTTAAGTT+GGG | - | tig0019933:43738-43757 | Msa1377500:intron | 30.0% |
| TGGAATATTATAAGTAGTGC+TGG | + | tig0019933:43815-43834 | None:intergenic | 30.0% | |
| !!! | GTTAGACTTTTGTTTCTGTT+CGG | - | tig0019933:43926-43945 | Msa1377500:intron | 30.0% |
| AATGTTACATGCATAAGGTA+TGG | + | tig0019933:44117-44136 | None:intergenic | 30.0% | |
| AGCATAATGTTACATGCATA+AGG | + | tig0019933:44122-44141 | None:intergenic | 30.0% | |
| !!! | CACCAATATTTTGACAGTTT+AGG | - | tig0019933:44246-44265 | Msa1377500:intron | 30.0% |
| AAAGCACAAATTGAAGAAGT+AGG | - | tig0019933:44341-44360 | Msa1377500:intron | 30.0% | |
| TGTTAATAACATCACAACAG+AGG | - | tig0019933:44385-44404 | Msa1377500:intron | 30.0% | |
| GTTAATAACATCACAACAGA+GGG | - | tig0019933:44386-44405 | Msa1377500:intron | 30.0% | |
| ! | GTGTTTTTCTTCTTAGAGAA+TGG | - | tig0019933:44510-44529 | Msa1377500:intron | 30.0% |
| TTCTTCTTAGAGAATGGTAA+AGG | - | tig0019933:44516-44535 | Msa1377500:intron | 30.0% | |
| AGTTACAAAATTGACGTACA+TGG | + | tig0019933:44581-44600 | None:intergenic | 30.0% | |
| TGGCCAATGTTATATTATCA+TGG | + | tig0019933:44765-44784 | None:intergenic | 30.0% | |
| TTTAAGCCTGCAGAAATTAT+AGG | - | tig0019933:44875-44894 | Msa1377500:intron | 30.0% | |
| CTAAATCCTATAATTTCTGC+AGG | + | tig0019933:44884-44903 | None:intergenic | 30.0% | |
| CTGCAGAAATTATAGGATTT+AGG | - | tig0019933:44882-44901 | Msa1377500:intron | 30.0% | |
| CAATTCTTATGCTTTCATGA+GGG | + | tig0019933:45018-45037 | None:intergenic | 30.0% | |
| ! | CTCATGAAAGCATAAGAATT+GGG | - | tig0019933:45017-45036 | Msa1377500:intron | 30.0% |
| ATATTGTTATGATTTCCAGC+GGG | + | tig0019933:45084-45103 | None:intergenic | 30.0% | |
| TGCAAGCATCACATATTAAA+AGG | - | tig0019933:45205-45224 | Msa1377500:intron | 30.0% | |
| ! | CTTGTTGAACATTTTCATAC+TGG | - | tig0019933:45489-45508 | Msa1377500:intron | 30.0% |
| GGTACAACTTCAATTTAGTT+AGG | + | tig0019933:45603-45622 | None:intergenic | 30.0% | |
| TAAATTGAAGTTGTACCACT+CGG | - | tig0019933:45606-45625 | Msa1377500:intron | 30.0% | |
| AATAATAAGAGAGATCTTCG+TGG | + | tig0019933:45904-45923 | None:intergenic | 30.0% | |
| TTCACAAAGTGTAAGATGGA+AGG | - | tig0019933:42992-43011 | Msa1377500:three_prime_UTR | 35.0% | |
| ACGATCCATTTCTTTATGCT+TGG | + | tig0019933:43025-43044 | None:intergenic | 35.0% | |
| ! | TAAACTTCCTTTTGCAATCG+AGG | - | tig0019933:43162-43181 | Msa1377500:three_prime_UTR | 35.0% |
| TTAACTACCTCGATTGCAAA+AGG | + | tig0019933:43172-43191 | None:intergenic | 35.0% | |
| ! | AGTTAGGGTTTTGCTCAAAA+AGG | - | tig0019933:43304-43323 | Msa1377500:three_prime_UTR | 35.0% |
| ! | TTTTGCTCAAAAAGGAGGAT+GGG | - | tig0019933:43312-43331 | Msa1377500:three_prime_UTR | 35.0% |
| ATAACCAGAACATTGTTGTG+AGG | - | tig0019933:43602-43621 | Msa1377500:intron | 35.0% | |
| !! | ATATTCCACTTTTATGGCTC+TGG | - | tig0019933:43827-43846 | Msa1377500:intron | 35.0% |
| ! | TCTTTTCCATTCCTTGTCTT+GGG | + | tig0019933:44090-44109 | None:intergenic | 35.0% |
| GGCCTAAACTGTCAAAATAT+TGG | + | tig0019933:44251-44270 | None:intergenic | 35.0% | |
| !! | TGAATTTGTAAAAGTGCCAC+TGG | + | tig0019933:44272-44291 | None:intergenic | 35.0% |
| ! | GTAAAACTAGTTTGCACTGA+CGG | - | tig0019933:44649-44668 | Msa1377500:intron | 35.0% |
| GTGAAGAATACGTTCTTAGA+GGG | - | tig0019933:44957-44976 | Msa1377500:intron | 35.0% | |
| TGAAGAATACGTTCTTAGAG+GGG | - | tig0019933:44958-44977 | Msa1377500:intron | 35.0% | |
| CCAATTCTTATGCTTTCATG+AGG | + | tig0019933:45019-45038 | None:intergenic | 35.0% | |
| ! | CCTCATGAAAGCATAAGAAT+TGG | - | tig0019933:45016-45035 | Msa1377500:intron | 35.0% |
| ! | ATAGATGATCTCTTTGGTGT+GGG | + | tig0019933:45115-45134 | None:intergenic | 35.0% |
| CTCTTAGAAAAACCCATACT+CGG | + | tig0019933:45522-45541 | None:intergenic | 35.0% | |
| !! | GAGTATGGGTTTTTCTAAGA+GGG | - | tig0019933:45521-45540 | Msa1377500:intron | 35.0% |
| ! | GGATGTAACATTTTGCTAAG+AGG | - | tig0019933:45647-45666 | Msa1377500:intron | 35.0% |
| TCCAAAAAGACTGTTGCTGA+AGG | - | tig0019933:43067-43086 | Msa1377500:three_prime_UTR | 40.0% | |
| ! | TCCTTCAGCAACAGTCTTTT+TGG | + | tig0019933:43071-43090 | None:intergenic | 40.0% |
| ! | AGTAGGGTTTTCGCATGATT+TGG | + | tig0019933:43110-43129 | None:intergenic | 40.0% |
| AACCCTACTTGTGTCGAAAT+TGG | - | tig0019933:43121-43140 | Msa1377500:three_prime_UTR | 40.0% | |
| ACCCTACTTGTGTCGAAATT+GGG | - | tig0019933:43122-43141 | Msa1377500:three_prime_UTR | 40.0% | |
| TTGTTGATCACAGCTTGACA+AGG | - | tig0019933:43250-43269 | Msa1377500:three_prime_UTR | 40.0% | |
| CTCTTTGCATGAAATCACGA+GGG | + | tig0019933:43280-43299 | None:intergenic | 40.0% | |
| ! | TAGGGTTTTGCTCAAAAAGG+AGG | - | tig0019933:43307-43326 | Msa1377500:three_prime_UTR | 40.0% |
| ! | GTTTTGCTCAAAAAGGAGGA+TGG | - | tig0019933:43311-43330 | Msa1377500:three_prime_UTR | 40.0% |
| AACTTACTGGAAGCTATGGA+TGG | + | tig0019933:43350-43369 | None:intergenic | 40.0% | |
| CTATCATTCCTTGTCTAAGC+CGG | - | tig0019933:43551-43570 | Msa1377500:intron | 40.0% | |
| ! | CACATTTTATGGAAATGGGG+TGG | + | tig0019933:43580-43599 | None:intergenic | 40.0% |
| ! | AACATTGTTGTGAGGTGCTA+TGG | - | tig0019933:43610-43629 | Msa1377500:intron | 40.0% |
| ! | GGATGGACTTAGAGTAGAAT+TGG | - | tig0019933:43894-43913 | Msa1377500:intron | 40.0% |
| TGAAATTGGATCCCAAGACA+AGG | - | tig0019933:44076-44095 | Msa1377500:intron | 40.0% | |
| ! | CTCTTTTCCATTCCTTGTCT+TGG | + | tig0019933:44091-44110 | None:intergenic | 40.0% |
| !! | ATTTTGACAGTTTAGGCCAG+TGG | - | tig0019933:44253-44272 | Msa1377500:intron | 40.0% |
| GGTGAAGAATACGTTCTTAG+AGG | - | tig0019933:44956-44975 | Msa1377500:intron | 40.0% | |
| GAAGAATACGTTCTTAGAGG+GGG | - | tig0019933:44959-44978 | Msa1377500:intron | 40.0% | |
| !! | TTTCATGAGGGCGTTTGAAT+TGG | + | tig0019933:45006-45025 | None:intergenic | 40.0% |
| TAAGAATTGGGATGAACCTG+AGG | - | tig0019933:45029-45048 | Msa1377500:intron | 40.0% | |
| AAGAATTGGGATGAACCTGA+GGG | - | tig0019933:45030-45049 | Msa1377500:intron | 40.0% | |
| CATAGATGATCTCTTTGGTG+TGG | + | tig0019933:45116-45135 | None:intergenic | 40.0% | |
| ! | CGAGTATGGGTTTTTCTAAG+AGG | - | tig0019933:45520-45539 | Msa1377500:intron | 40.0% |
| AAGTTGTACCACTCGGAAAT+GGG | - | tig0019933:45613-45632 | Msa1377500:intron | 40.0% | |
| CGTGTTTCTTCTTGCAACTT+TGG | + | tig0019933:45725-45744 | None:intergenic | 40.0% | |
| AAGAAGAAACACGTCACGTT+TGG | - | tig0019933:45732-45751 | Msa1377500:CDS | 40.0% | |
| CAACCTAAATTGCTTGGCTT+GGG | + | tig0019933:45801-45820 | None:intergenic | 40.0% | |
| TAAGGGCAACCTAAATTGCT+TGG | + | tig0019933:45807-45826 | None:intergenic | 40.0% | |
| !! | TTTAGGTTGCCCTTAACAGT+AGG | - | tig0019933:45812-45831 | Msa1377500:CDS | 40.0% |
| ! | TTAGGTTGCCCTTAACAGTA+GGG | - | tig0019933:45813-45832 | Msa1377500:CDS | 40.0% |
| GTCTTGTAGTAGCAAAACCT+TGG | + | tig0019933:45843-45862 | None:intergenic | 40.0% | |
| ATAAGAGAGATCTTCGTGGT+GGG | + | tig0019933:45900-45919 | None:intergenic | 40.0% | |
| AATAAGAGAGATCTTCGTGG+TGG | + | tig0019933:45901-45920 | None:intergenic | 40.0% | |
| GTTGCTGAAGGAAGACGAAT+TGG | - | tig0019933:43079-43098 | Msa1377500:three_prime_UTR | 45.0% | |
| CCCCAATTTCGACACAAGTA+GGG | + | tig0019933:43126-43145 | None:intergenic | 45.0% | |
| CCCTACTTGTGTCGAAATTG+GGG | - | tig0019933:43123-43142 | Msa1377500:three_prime_UTR | 45.0% | |
| TCCCCAATTTCGACACAAGT+AGG | + | tig0019933:43127-43146 | None:intergenic | 45.0% | |
| CCTCTTTGCATGAAATCACG+AGG | + | tig0019933:43281-43300 | None:intergenic | 45.0% | |
| CCTCGTGATTTCATGCAAAG+AGG | - | tig0019933:43278-43297 | Msa1377500:three_prime_UTR | 45.0% | |
| TCATGCAAAGAGGACGAGTT+AGG | - | tig0019933:43288-43307 | Msa1377500:three_prime_UTR | 45.0% | |
| CATGCAAAGAGGACGAGTTA+GGG | - | tig0019933:43289-43308 | Msa1377500:three_prime_UTR | 45.0% | |
| ! | CTGATTAGTACCGGACCTTA+TGG | - | tig0019933:43464-43483 | Msa1377500:CDS | 45.0% |
| AGCACCTCACAACAATGTTC+TGG | + | tig0019933:43609-43628 | None:intergenic | 45.0% | |
| TCTGATGTTGACGTCGGTAT+TGG | - | tig0019933:43659-43678 | Msa1377500:intron | 45.0% | |
| TGAGTCCAGAGCCATAAAAG+TGG | + | tig0019933:43835-43854 | None:intergenic | 45.0% | |
| ! | ACTCAACACTGGATTGGAAC+TGG | - | tig0019933:43850-43869 | Msa1377500:intron | 45.0% |
| TTGGATCCCAAGACAAGGAA+TGG | - | tig0019933:44081-44100 | Msa1377500:intron | 45.0% | |
| AGAATTGGGATGAACCTGAG+GGG | - | tig0019933:45031-45050 | Msa1377500:intron | 45.0% | |
| AATGTTACGCGTTGCAGAGA+TGG | - | tig0019933:45344-45363 | Msa1377500:intron | 45.0% | |
| TGGTCCTTCCATGGTGTTTA+GGG | + | tig0019933:45371-45390 | None:intergenic | 45.0% | |
| TTGGTCCTTCCATGGTGTTT+AGG | + | tig0019933:45372-45391 | None:intergenic | 45.0% | |
| TCAACAACAACTGCAACTGC+TGG | - | tig0019933:45408-45427 | Msa1377500:intron | 45.0% | |
| CTGGACCTTCCAACAAATCT+GGG | - | tig0019933:45427-45446 | Msa1377500:intron | 45.0% | |
| !! | CCTTTCCCAGATTTGTTGGA+AGG | + | tig0019933:45435-45454 | None:intergenic | 45.0% |
| CCTTCCAACAAATCTGGGAA+AGG | - | tig0019933:45432-45451 | Msa1377500:intron | 45.0% | |
| TCCAACAAATCTGGGAAAGG+TGG | - | tig0019933:45435-45454 | Msa1377500:intron | 45.0% | |
| TCCACCTTTCCCAGATTTGT+TGG | + | tig0019933:45439-45458 | None:intergenic | 45.0% | |
| AGAAAAACCCATACTCGGAG+AGG | + | tig0019933:45517-45536 | None:intergenic | 45.0% | |
| GAAGTTGTACCACTCGGAAA+TGG | - | tig0019933:45612-45631 | Msa1377500:intron | 45.0% | |
| AGAAACACGTCACGTTTGGA+AGG | - | tig0019933:45736-45755 | Msa1377500:CDS | 45.0% | |
| TTGCCCAAGCCAAGCAATTT+AGG | - | tig0019933:45795-45814 | Msa1377500:CDS | 45.0% | |
| GCAACCTAAATTGCTTGGCT+TGG | + | tig0019933:45802-45821 | None:intergenic | 45.0% | |
| TTGGTCGTCCCTACTGTTAA+GGG | + | tig0019933:45824-45843 | None:intergenic | 45.0% | |
| !!! | TTATTTTTTTTATTTTTTTG+AGG | - | tig0019933:45919-45938 | Msa1377500:CDS | 5.0% |
| !!! | TATTTTTTTTATTTTTTTGA+GGG | - | tig0019933:45920-45939 | Msa1377500:CDS | 5.0% |
| TCATTCCTTGTCTAAGCCGG+AGG | - | tig0019933:43554-43573 | Msa1377500:intron | 50.0% | |
| TCCGACTCTGATGTTGACGT+CGG | - | tig0019933:43653-43672 | Msa1377500:intron | 50.0% | |
| ACCGACGTCAACATCAGAGT+CGG | + | tig0019933:43657-43676 | None:intergenic | 50.0% | |
| !! | TATGGCTCTGGACTCAACAC+TGG | - | tig0019933:43839-43858 | Msa1377500:intron | 50.0% |
| CTCTGGACTCAACACTGGAT+TGG | - | tig0019933:43844-43863 | Msa1377500:intron | 50.0% | |
| GACGTACATGGCAAGATGAC+AGG | + | tig0019933:44569-44588 | None:intergenic | 50.0% | |
| CAGAGAGAGAGAGAGAGAGA+AGG | - | tig0019933:44905-44924 | Msa1377500:intron | 50.0% | |
| GGAAACTGAAACCCGTTGCA+CGG | - | tig0019933:44926-44945 | Msa1377500:intron | 50.0% | |
| AAACCCGTTGCACGGTGAAA+AGG | - | tig0019933:44934-44953 | Msa1377500:intron | 50.0% | |
| AACCCGTTGCACGGTGAAAA+GGG | - | tig0019933:44935-44954 | Msa1377500:intron | 50.0% | |
| ! | TCACCCTTTTCACCGTGCAA+CGG | + | tig0019933:44941-44960 | None:intergenic | 50.0% |
| ATTGGTGTGTCAGTACCTCC+AGG | + | tig0019933:44988-45007 | None:intergenic | 50.0% | |
| GAATTGGGATGAACCTGAGG+GGG | - | tig0019933:45032-45051 | Msa1377500:intron | 50.0% | |
| GAGATGGTCCCTAAACACCA+TGG | - | tig0019933:45360-45379 | Msa1377500:intron | 50.0% | |
| TGGTCCCTAAACACCATGGA+AGG | - | tig0019933:45364-45383 | Msa1377500:intron | 50.0% | |
| TGATGCAGTCTCCTGCTTCT+TGG | + | tig0019933:45391-45410 | None:intergenic | 50.0% | |
| GCTGGACCTTCCAACAAATC+TGG | - | tig0019933:45426-45445 | Msa1377500:intron | 50.0% | |
| !! | CGGAAATGGGTTTTGCGCAT+AGG | - | tig0019933:45626-45645 | Msa1377500:intron | 50.0% |
| CTTGGTCGTCCCTACTGTTA+AGG | + | tig0019933:45825-45844 | None:intergenic | 50.0% | |
| CTTAACAGTAGGGACGACCA+AGG | - | tig0019933:45823-45842 | Msa1377500:CDS | 50.0% | |
| TATGGAAATGGGGTGGCCTC+CGG | + | tig0019933:43573-43592 | None:intergenic | 55.0% | |
| ! | CACCCTTTTCACCGTGCAAC+GGG | + | tig0019933:44940-44959 | None:intergenic | 55.0% |
| ATTTCCAGCGGGACGTCTTC+CGG | + | tig0019933:45073-45092 | None:intergenic | 55.0% | |
| CCTGCTTCTTGGTCCTTCCA+TGG | + | tig0019933:45380-45399 | None:intergenic | 55.0% | |
| CCATGGAAGGACCAAGAAGC+AGG | - | tig0019933:45377-45396 | Msa1377500:intron | 55.0% | |
| TACTGGTGCCTCTCCGAGTA+TGG | - | tig0019933:45506-45525 | Msa1377500:intron | 55.0% | |
| ACTGGTGCCTCTCCGAGTAT+GGG | - | tig0019933:45507-45526 | Msa1377500:intron | 55.0% | |
| GCGCAAAACCCATTTCCGAG+TGG | + | tig0019933:45624-45643 | None:intergenic | 55.0% | |
| GACGAAGTTGTCTCCCCCTC+AGG | + | tig0019933:45048-45067 | None:intergenic | 60.0% | |
| GGGGAGACAACTTCGTCCAC+CGG | - | tig0019933:45051-45070 | Msa1377500:intron | 60.0% | |
| GGTGGCCTCCGGCTTAGACA+AGG | + | tig0019933:43562-43581 | None:intergenic | 65.0% | |
| CGTTCTTAGAGGGGGCGACC+TGG | - | tig0019933:44967-44986 | Msa1377500:intron | 65.0% | |
| TCTTAGAGGGGGCGACCTGG+AGG | - | tig0019933:44970-44989 | Msa1377500:intron | 65.0% | |
| TCCACCGGAAGACGTCCCGC+TGG | - | tig0019933:45066-45085 | Msa1377500:intron | 70.0% | |
| TCCAGCGGGACGTCTTCCGG+TGG | + | tig0019933:45070-45089 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019933 | gene | 42939 | 45948 | 42939 | ID=Msa1377500;Name=Msa1377500 |
| tig0019933 | mRNA | 42939 | 45948 | 42939 | ID=Msa1377500-mRNA-1;Parent=Msa1377500;Name=Msa1377500-mRNA-1;_AED=0.01;_eAED=0.01;_QI=8|1|1|1|1|1|3|475|158 |
| tig0019933 | exon | 42939 | 43553 | 42939 | ID=Msa1377500-mRNA-1:exon:5668;Parent=Msa1377500-mRNA-1 |
| tig0019933 | exon | 45525 | 45624 | 45525 | ID=Msa1377500-mRNA-1:exon:5667;Parent=Msa1377500-mRNA-1 |
| tig0019933 | exon | 45704 | 45948 | 45704 | ID=Msa1377500-mRNA-1:exon:5666;Parent=Msa1377500-mRNA-1 |
| tig0019933 | five_prime_UTR | 45941 | 45948 | 45941 | ID=Msa1377500-mRNA-1:five_prime_utr;Parent=Msa1377500-mRNA-1 |
| tig0019933 | CDS | 45704 | 45940 | 45704 | ID=Msa1377500-mRNA-1:cds;Parent=Msa1377500-mRNA-1 |
| tig0019933 | CDS | 45525 | 45624 | 45525 | ID=Msa1377500-mRNA-1:cds;Parent=Msa1377500-mRNA-1 |
| tig0019933 | CDS | 43414 | 43553 | 43414 | ID=Msa1377500-mRNA-1:cds;Parent=Msa1377500-mRNA-1 |
| tig0019933 | three_prime_UTR | 42939 | 43413 | 42939 | ID=Msa1377500-mRNA-1:three_prime_utr;Parent=Msa1377500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
