AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1288420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1288420 MtrunA17_Chr8g0361821 84.881 377 8 2 1 369 1 336 0.0 627
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1288420 AT1G14300.1 71.651 321 83 1 1 313 1 321 4.36e-168 473
Msa1288420 AT1G14300.2 64.345 359 82 2 1 313 1 359 4.09e-161 456

Find 99 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACTTGAGTGCGAATTTC+TGG 0.188990 8_3:+41365884 None:intergenic
TAACCAACTTGTACTATTCT+AGG 0.211173 8_3:+41363114 None:intergenic
TGGTAATTCCAAATTTAAAA+TGG 0.219479 8_3:+41362781 None:intergenic
TTACAACACTAGAGTTCTTA+TGG 0.247520 8_3:+41362825 None:intergenic
CGAATTTCTGGATCATTAAC+AGG 0.275821 8_3:+41365896 None:intergenic
TCGTTTGCTTGTTATGCTTT+TGG 0.276364 8_3:-41368594 Msa1288420:CDS
TCATACGCTCCCATCACTTT+TGG 0.288944 8_3:+41363075 None:intergenic
CATATACTTGATCTTATTGC+AGG 0.326191 8_3:-41365855 Msa1288420:intron
TGGTACTGATTCCTTGCTTC+AGG 0.336668 8_3:-41368549 Msa1288420:intron
TCAGCTACAGAATTTGCTTT+TGG 0.342043 8_3:-41366742 Msa1288420:CDS
TCGTATCAATCCAAACAAAA+AGG 0.344219 8_3:-41369920 Msa1288420:five_prime_UTR
GACATAGTTCGCGGATTAAC+CGG 0.348456 8_3:-41369685 Msa1288420:CDS
CTGCAATAAGATCAAGTATA+TGG 0.360937 8_3:+41365856 None:intergenic
CTGGCCTGCATTACTTCTTC+CGG 0.363720 8_3:-41366706 Msa1288420:CDS
TGTTTCAAGAGACCCCGTTT+TGG 0.375889 8_3:+41367501 None:intergenic
AACAGTTCATTGAGAAAGAA+AGG 0.392448 8_3:-41367456 Msa1288420:CDS
TTTACGTATCCTAAAAGATA+TGG 0.395342 8_3:+41362761 None:intergenic
AACATAAAGATGGGGATTGT+GGG 0.397761 8_3:+41362987 None:intergenic
TACCGCTGCCGTTAACCAAC+TGG 0.399147 8_3:+41362917 None:intergenic
AGGCAGGTCGAAGAGCCTTT+TGG 0.400322 8_3:-41363149 Msa1288420:CDS
CAAATTCTGTAGCTGATTCT+CGG 0.403605 8_3:+41366749 None:intergenic
GCTTCTACTCGACCCAAAAC+GGG 0.420535 8_3:-41367514 Msa1288420:CDS
AGCTTCTACTCGACCCAAAA+CGG 0.435211 8_3:-41367515 Msa1288420:CDS
CCTCCATTGTTGCTAAACTT+AGG 0.436704 8_3:-41362626 Msa1288420:three_prime_UTR
TGATATTGCTATCAGGTCTC+TGG 0.439026 8_3:-41366798 Msa1288420:intron
AGAGTGTATAACCTTGTTGC+CGG 0.449596 8_3:+41366680 None:intergenic
CACAAAGCAGCGGGCAGGGA+GGG 0.451872 8_3:-41367538 Msa1288420:CDS
ATCCAGTTGGTTAACGGCAG+CGG 0.457409 8_3:-41362919 Msa1288420:CDS
CAACATAAAGATGGGGATTG+TGG 0.464624 8_3:+41362986 None:intergenic
GGGAGAGTAGTAAGAAAGAA+TGG 0.465340 8_3:-41369870 Msa1288420:exon
AACATCACAAAGCAGCGGGC+AGG 0.468910 8_3:-41367543 Msa1288420:CDS
GTTGGTTAACGGCAGCGGTA+TGG 0.481170 8_3:-41362914 Msa1288420:CDS
AGAAATTCGCACTCAAGTAT+TGG 0.484616 8_3:-41365882 Msa1288420:CDS
TTAGAAAAGCAACATAAAGA+TGG 0.486510 8_3:+41362977 None:intergenic
TAGAAAAGCAACATAAAGAT+GGG 0.487272 8_3:+41362978 None:intergenic
TTCGAATCTTGCGGAGGAGA+TGG 0.490479 8_3:-41368678 Msa1288420:CDS
TAAGAACTCTAGTGTTGTAA+AGG 0.492901 8_3:-41362822 Msa1288420:three_prime_UTR
AGGCCCATTTACAGACCAAA+AGG 0.505026 8_3:+41363134 None:intergenic
TTTACTTGTTGCTACCAAGA+TGG 0.505688 8_3:+41369950 None:intergenic
ACAGTTCATTGAGAAAGAAA+GGG 0.506298 8_3:-41367455 Msa1288420:CDS
ATAACCTTGTTGCCGGCTAC+CGG 0.509222 8_3:+41366687 None:intergenic
GTATGAGCAACTAGGATCCT+TGG 0.516650 8_3:-41363058 Msa1288420:CDS
GCATTACTTCTTCCGGTAGC+CGG 0.527530 8_3:-41366699 Msa1288420:CDS
CCATTGTTGCTAAACTTAGG+AGG 0.529032 8_3:-41362623 Msa1288420:three_prime_UTR
CGAGGAAGATCCAAAAGTGA+TGG 0.532198 8_3:-41363085 Msa1288420:CDS
TACTCTGTCGTCTCAGTGGA+TGG 0.536104 8_3:+41362886 None:intergenic
CTTATCTTCTCCATCACCAC+AGG 0.538535 8_3:-41369819 Msa1288420:intron
TTGTAAAACAGTTACGGCGA+GGG 0.542669 8_3:-41369894 Msa1288420:five_prime_UTR
TAAAACAGTTACGGCGAGGG+AGG 0.556156 8_3:-41369891 Msa1288420:five_prime_UTR
ATGTATGCCTTCCTCAGAGC+CGG 0.556628 8_3:+41369666 None:intergenic
TGATTGATTACCTGTGGTGA+TGG 0.557068 8_3:+41369809 None:intergenic
CCTCCTAAGTTTAGCAACAA+TGG 0.557936 8_3:+41362623 None:intergenic
AATCTCACTCAACTTGATGC+TGG 0.559771 8_3:-41368569 Msa1288420:CDS
CATTGTTGCTAAACTTAGGA+GGG 0.561868 8_3:-41362622 Msa1288420:three_prime_UTR
GCTACCGGAAGAAGTAATGC+AGG 0.562221 8_3:+41366702 None:intergenic
TTCGCAAAATTCGAATCTTG+CGG 0.563174 8_3:-41368687 Msa1288420:CDS
CTTTGTGATGTTAACAAGCA+TGG 0.572222 8_3:+41367554 None:intergenic
GTAGTAAGAAAGAATGGCGA+CGG 0.575179 8_3:-41369864 Msa1288420:exon
TGTTAACATCACAAAGCAGC+GGG 0.576512 8_3:-41367547 Msa1288420:CDS
GATGGTTCAGACGAGACTTG+TGG 0.578200 8_3:-41368660 Msa1288420:CDS
ACATAAAGATGGGGATTGTG+GGG 0.579552 8_3:+41362988 None:intergenic
GTTGTTTCAGGAAGTTTCTG+AGG 0.582122 8_3:-41368735 Msa1288420:intron
GGATTAACCGGCTCTGAGGA+AGG 0.583352 8_3:-41369673 Msa1288420:CDS
GAGGAAGATCCAAAAGTGAT+GGG 0.590608 8_3:-41363084 Msa1288420:CDS
ACATCACAAAGCAGCGGGCA+GGG 0.590651 8_3:-41367542 Msa1288420:CDS
TATATGTTATGAAGCTTGTG+AGG 0.597267 8_3:-41368029 Msa1288420:CDS
GCTGCCGTTGACATAGTTCG+CGG 0.598021 8_3:-41369694 Msa1288420:CDS
GGGCCTAGAATAGTACAAGT+TGG 0.605037 8_3:-41363117 Msa1288420:CDS
AGTGCAGTCCCAAGTTCAAG+TGG 0.605991 8_3:+41365935 None:intergenic
ATGGGAGCGTATGAGCAACT+AGG 0.606147 8_3:-41363066 Msa1288420:CDS
ATAAAAGCACACCTGAAGCA+AGG 0.606782 8_3:+41368538 None:intergenic
TCGCGGATTAACCGGCTCTG+AGG 0.611761 8_3:-41369677 Msa1288420:CDS
AAAACAGTTACGGCGAGGGA+GGG 0.612043 8_3:-41369890 Msa1288420:five_prime_UTR
TCACAAAGCAGCGGGCAGGG+AGG 0.618149 8_3:-41367539 Msa1288420:CDS
TACGCAGATCTACAGTGAGG+AGG 0.618557 8_3:-41365972 Msa1288420:intron
AAAAGTTGCTCAAAACTCAC+AGG 0.619728 8_3:+41369973 None:intergenic
GGTTAACGGCAGCGGTATGG+AGG 0.622742 8_3:-41362911 Msa1288420:CDS
CGTACCGTTCTTCTCATGTG+TGG 0.624259 8_3:+41367993 None:intergenic
TCTTCCGGTAGCCGGCAACA+AGG 0.629059 8_3:-41366691 Msa1288420:intron
CTGTCAGATTGATGATGAGA+AGG 0.630024 8_3:-41368061 Msa1288420:intron
TAACTACTCTGTCGTCTCAG+TGG 0.638294 8_3:+41362882 None:intergenic
CATAAAGATGGGGATTGTGG+GGG 0.640724 8_3:+41362989 None:intergenic
AGCATTTACCGCTCACTCTG+CGG 0.644573 8_3:+41362698 None:intergenic
AGAATATCTACTATTTACCA+AGG 0.644796 8_3:+41363041 None:intergenic
GCAAAATTCGAATCTTGCGG+AGG 0.645849 8_3:-41368684 Msa1288420:CDS
TATACACACCGCAGAGTGAG+CGG 0.646159 8_3:-41362706 Msa1288420:three_prime_UTR
CAGTTCATTGAGAAAGAAAG+GGG 0.648372 8_3:-41367454 Msa1288420:intron
AAACGAGTGACACAGCACTC+AGG 0.648949 8_3:+41368611 None:intergenic
GAGACTTGTGGAAACAACAA+TGG 0.650744 8_3:-41368648 Msa1288420:CDS
AGAAAAGCAACATAAAGATG+GGG 0.658712 8_3:+41362979 None:intergenic
CCTAAGTTTAGCAACAATGG+AGG 0.675177 8_3:+41362626 None:intergenic
TAATCCGCGAACTATGTCAA+CGG 0.679051 8_3:+41369690 None:intergenic
ATTGATGATGAGAAGGTGCG+TGG 0.685770 8_3:-41368054 Msa1288420:CDS
TTTGTAAAACAGTTACGGCG+AGG 0.688367 8_3:-41369895 Msa1288420:five_prime_UTR
TTGTTAACATCACAAAGCAG+CGG 0.690656 8_3:-41367548 Msa1288420:CDS
ACAAGTTGGTTATGAAGACG+AGG 0.692263 8_3:-41363103 Msa1288420:CDS
CTTCTACTCGACCCAAAACG+GGG 0.692630 8_3:-41367513 Msa1288420:CDS
AGAACCACACATGAGAAGAA+CGG 0.692834 8_3:-41367997 Msa1288420:intron
TTTACTGGTACAGATCACGA+AGG 0.726550 8_3:-41369716 Msa1288420:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATAAAATAAAATTAA+AGG + chr8_3:41363582-41363601 None:intergenic 0.0%
!!! TATCACTTTTTTTTTTTTTA+TGG - chr8_3:41363805-41363824 Msa1288420:intron 10.0%
!!! ATCACTTTTTTTTTTTTTAT+GGG - chr8_3:41363806-41363825 Msa1288420:intron 10.0%
!! TAATTATCATTAACATATAA+TGG - chr8_3:41364192-41364211 Msa1288420:intron 10.0%
!! TATAAAAGTTAACAAAATTA+TGG - chr8_3:41364416-41364435 Msa1288420:intron 10.0%
!!! AAAATATATTAATCCTTTTT+GGG + chr8_3:41365398-41365417 None:intergenic 10.0%
!!! AAAAATATATTAATCCTTTT+TGG + chr8_3:41365399-41365418 None:intergenic 10.0%
!!! AAATCCTAATAATAAATTTT+AGG + chr8_3:41367826-41367845 None:intergenic 10.0%
!!! TTTTCCTTATTTTTTAAATC+TGG - chr8_3:41364718-41364737 Msa1288420:intron 15.0%
!!! AAATATATTAATCCTTTTTG+GGG + chr8_3:41365397-41365416 None:intergenic 15.0%
!!! TAATTCTTTTTACAAATGAT+AGG + chr8_3:41365501-41365520 None:intergenic 15.0%
!! TTAGCCTAAAATTTATTATT+AGG - chr8_3:41367819-41367838 Msa1288420:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr8_3:41369131-41369150 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr8_3:41369155-41369174 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr8_3:41369154-41369173 Msa1288420:intron 15.0%
!!! CAAATTTTCCATTTTAAATT+TGG - chr8_3:41369817-41369836 Msa1288420:intron 15.0%
!! AATTGAAGTGGAATTAAAAA+AGG + chr8_3:41362834-41362853 None:intergenic 20.0%
!!! TAAACTGTATTTTTGTTTAC+TGG - chr8_3:41362875-41362894 Msa1288420:exon 20.0%
!! TCAATCAAAAAACTTGATTT+CGG - chr8_3:41362974-41362993 Msa1288420:CDS 20.0%
!!! TAATTATACAAACCTGTTTT+CGG + chr8_3:41363036-41363055 None:intergenic 20.0%
!!! AAGAAAAAAAGCATACAAAA+AGG - chr8_3:41363114-41363133 Msa1288420:CDS 20.0%
!!! AGAAAAAAAGCATACAAAAA+GGG - chr8_3:41363115-41363134 Msa1288420:CDS 20.0%
!!! TTATGAAGATATAATTTTCG+TGG - chr8_3:41363474-41363493 Msa1288420:intron 20.0%
!!! AGTTTAGTGTTTTAGTTATT+TGG - chr8_3:41363692-41363711 Msa1288420:intron 20.0%
!! AATGAAGACTAAAATTAGAA+AGG - chr8_3:41363754-41363773 Msa1288420:intron 20.0%
!! AAAAAAGTGATACCATAATT+TGG + chr8_3:41363797-41363816 None:intergenic 20.0%
!! ACTTTCATTTGAATGTAATT+TGG - chr8_3:41364096-41364115 Msa1288420:intron 20.0%
!!! AAACAAAATGAGTGAAATTT+TGG - chr8_3:41364144-41364163 Msa1288420:intron 20.0%
!!! AACTTTTATATTTAGTGCAA+AGG + chr8_3:41364406-41364425 None:intergenic 20.0%
!! AACACCAGATTTAAAAAATA+AGG + chr8_3:41364725-41364744 None:intergenic 20.0%
!!! GAATATTTTACTTTGAATTC+TGG - chr8_3:41365233-41365252 Msa1288420:intron 20.0%
!! TATAATGTGAAACTAATACA+TGG - chr8_3:41365534-41365553 Msa1288420:intron 20.0%
!! ACAAATGAAGGATTTATTAT+TGG - chr8_3:41366181-41366200 Msa1288420:intron 20.0%
!! AAGAAGATAGAACAATTTAA+GGG + chr8_3:41366804-41366823 None:intergenic 20.0%
!! AAAGAAGATAGAACAATTTA+AGG + chr8_3:41366805-41366824 None:intergenic 20.0%
!! TATACTAAACTTATGAAGTA+GGG + chr8_3:41366988-41367007 None:intergenic 20.0%
!! TTATACTAAACTTATGAAGT+AGG + chr8_3:41366989-41367008 None:intergenic 20.0%
!! CAAAAATCATGTGTATAAAA+TGG - chr8_3:41367077-41367096 Msa1288420:intron 20.0%
!!! TACCATCAATTGTTTTAAAT+GGG - chr8_3:41367279-41367298 Msa1288420:intron 20.0%
!!! TTAATTTGTTTATGTGATTC+TGG - chr8_3:41367432-41367451 Msa1288420:intron 20.0%
!!! TAATTTGTTTATGTGATTCT+GGG - chr8_3:41367433-41367452 Msa1288420:intron 20.0%
!!! TGTGTTTTTTTGTATTTCTT+TGG - chr8_3:41367501-41367520 Msa1288420:CDS 20.0%
!! AAAAATGTTGATATAGATTG+AGG - chr8_3:41367557-41367576 Msa1288420:CDS 20.0%
!!! AATGATGATTTTAAGACTTA+TGG - chr8_3:41367750-41367769 Msa1288420:intron 20.0%
!!! ATGATGATTTTAAGACTTAT+GGG - chr8_3:41367751-41367770 Msa1288420:intron 20.0%
!!! TTTTTCCTTTATTTTACCAT+TGG - chr8_3:41367844-41367863 Msa1288420:intron 20.0%
!! TTAAAAAACCCAAAATGTAA+TGG - chr8_3:41368256-41368275 Msa1288420:intron 20.0%
!!! TAGTAAATTGTGTTTTGATA+TGG - chr8_3:41368805-41368824 Msa1288420:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr8_3:41369068-41369087 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr8_3:41369145-41369164 Msa1288420:intron 20.0%
!! TGGTAATTCCAAATTTAAAA+TGG + chr8_3:41369828-41369847 None:intergenic 20.0%
!! TTTACAAAAGCCTTTTTGTT+TGG + chr8_3:41362699-41362718 None:intergenic 25.0%
!!! GTTTTTTGATTGATTAGCTA+GGG + chr8_3:41362967-41362986 None:intergenic 25.0%
!!! AGTTTTTTGATTGATTAGCT+AGG + chr8_3:41362968-41362987 None:intergenic 25.0%
!! GAAAAAAAGCATACAAAAAG+GGG - chr8_3:41363116-41363135 Msa1288420:CDS 25.0%
!!! AACAGTGTTTTTAAAGATGT+AGG + chr8_3:41363151-41363170 None:intergenic 25.0%
! AAAAAGTGAGAACAATACTA+TGG - chr8_3:41363181-41363200 Msa1288420:intron 25.0%
! AAAAGTGAGAACAATACTAT+GGG - chr8_3:41363182-41363201 Msa1288420:intron 25.0%
! AAAAATAAGCCTATTCAAAC+GGG + chr8_3:41363383-41363402 None:intergenic 25.0%
! CAAAAATAAGCCTATTCAAA+CGG + chr8_3:41363384-41363403 None:intergenic 25.0%
!! AAGATATAATTTTCGTGGTA+AGG - chr8_3:41363479-41363498 Msa1288420:intron 25.0%
! CAAAAATAAGTCAATCCAAA+CGG - chr8_3:41363555-41363574 Msa1288420:intron 25.0%
! AAAAATAAGTCAATCCAAAC+GGG - chr8_3:41363556-41363575 Msa1288420:intron 25.0%
! ATAAAGTTGTTTATCCAAAG+AGG - chr8_3:41363649-41363668 Msa1288420:intron 25.0%
! AAAAACAGTCTACCAAATTA+TGG - chr8_3:41363782-41363801 Msa1288420:intron 25.0%
!!! GTGTTGATTATTGATTGTTT+TGG - chr8_3:41363828-41363847 Msa1288420:intron 25.0%
! TCATTAACATATAATGGTCA+TGG - chr8_3:41364198-41364217 Msa1288420:intron 25.0%
! TCATGGTAACATTAAAACAA+GGG - chr8_3:41364215-41364234 Msa1288420:intron 25.0%
!! TTGAACTGGTTAATTTGATT+AGG - chr8_3:41364249-41364268 Msa1288420:intron 25.0%
! TGAAGTAATATCAATGTGAA+TGG - chr8_3:41364276-41364295 Msa1288420:intron 25.0%
! TTGATGAACATATCAACTAT+TGG + chr8_3:41364361-41364380 None:intergenic 25.0%
! AATATTAATCCTCAAGTAAC+AGG + chr8_3:41364840-41364859 None:intergenic 25.0%
! TTGTAGAGAAACATATAACT+TGG - chr8_3:41364889-41364908 Msa1288420:intron 25.0%
! TGTAGAGAAACATATAACTT+GGG - chr8_3:41364890-41364909 Msa1288420:intron 25.0%
!!! AATAATTTGTTGAATCAGCA+TGG + chr8_3:41364999-41365018 None:intergenic 25.0%
!! TTCAAACATTTTTCCATACT+AGG + chr8_3:41365216-41365235 None:intergenic 25.0%
!! TTCTTTTTACAAATGATAGG+TGG + chr8_3:41365498-41365517 None:intergenic 25.0%
! ACATTCAGATATTATTACCA+AGG - chr8_3:41365674-41365693 Msa1288420:intron 25.0%
! CATTCAGATATTATTACCAA+GGG - chr8_3:41365675-41365694 Msa1288420:intron 25.0%
! TCGTCAATGTTAAAAATGTA+TGG - chr8_3:41365724-41365743 Msa1288420:intron 25.0%
! CGTCAATGTTAAAAATGTAT+GGG - chr8_3:41365725-41365744 Msa1288420:intron 25.0%
! TGATCCAAGCTATTAAAAAT+TGG + chr8_3:41365767-41365786 None:intergenic 25.0%
! TGAGAACTTAAATATCTTTC+AGG + chr8_3:41366014-41366033 None:intergenic 25.0%
! AAGGATTTATTATTGGTGTA+GGG - chr8_3:41366188-41366207 Msa1288420:intron 25.0%
! AATTATCAAATGTGAAAGGA+GGG + chr8_3:41366288-41366307 None:intergenic 25.0%
! AGAGAATTATCAAATGTGAA+AGG + chr8_3:41366292-41366311 None:intergenic 25.0%
! TAAATAATCCTCAATTGGTA+GGG + chr8_3:41366349-41366368 None:intergenic 25.0%
! TTAAATAATCCTCAATTGGT+AGG + chr8_3:41366350-41366369 None:intergenic 25.0%
! GTCTTTAAATAATCCTCAAT+TGG + chr8_3:41366354-41366373 None:intergenic 25.0%
!!! AGTAAGTTGATAAGTTTGTT+AGG + chr8_3:41366415-41366434 None:intergenic 25.0%
! TAGAGTAGTTAAGATTTAGT+TGG + chr8_3:41366450-41366469 None:intergenic 25.0%
! TCCAATATTCTATATCCTAA+TGG - chr8_3:41366474-41366493 Msa1288420:intron 25.0%
! TCCATTAGGATATAGAATAT+TGG + chr8_3:41366478-41366497 None:intergenic 25.0%
! TTTAACCTCATAACAAAACA+AGG + chr8_3:41366528-41366547 None:intergenic 25.0%
! TACTAGATTTGAAGACAAAA+TGG - chr8_3:41366831-41366850 Msa1288420:intron 25.0%
!!! AAATTGCTTTTTTTGTCCTT+TGG - chr8_3:41366922-41366941 Msa1288420:intron 25.0%
! ATACTAAACTTATGAAGTAG+GGG + chr8_3:41366987-41367006 None:intergenic 25.0%
! GCGCTAAAATTAATGAAATA+CGG - chr8_3:41367253-41367272 Msa1288420:intron 25.0%
!! CATTTAAAACAATTGATGGT+AGG + chr8_3:41367280-41367299 None:intergenic 25.0%
!!! CTACCATCAATTGTTTTAAA+TGG - chr8_3:41367278-41367297 Msa1288420:intron 25.0%
!! TACCCATTTAAAACAATTGA+TGG + chr8_3:41367284-41367303 None:intergenic 25.0%
!! TTTTAAATGGGTAAAGATGT+TGG - chr8_3:41367291-41367310 Msa1288420:intron 25.0%
! TTTAAGGAATTGAGTATGAT+AGG - chr8_3:41367456-41367475 Msa1288420:CDS 25.0%
!! AAATTTGTTTCAGAAGTTGA+GGG - chr8_3:41367722-41367741 Msa1288420:intron 25.0%
!! CTAATTCTCAGTTTTCATTT+TGG + chr8_3:41367778-41367797 None:intergenic 25.0%
! TTTAGGCTAAATTAATCCAA+TGG + chr8_3:41367809-41367828 None:intergenic 25.0%
!!! TATTAGGGTTTTAAGAACTT+TGG - chr8_3:41367995-41368014 Msa1288420:intron 25.0%
!!! ATTAGGGTTTTAAGAACTTT+GGG - chr8_3:41367996-41368015 Msa1288420:intron 25.0%
! AATAAATGAAAAGGGATGAA+AGG - chr8_3:41368068-41368087 Msa1288420:intron 25.0%
!! TCGTGGCTTAATAATAATTT+TGG + chr8_3:41368176-41368195 None:intergenic 25.0%
!! TCATTCATCCATTACATTTT+GGG + chr8_3:41368267-41368286 None:intergenic 25.0%
! TCAAAATTACTAAAAGGTGA+AGG + chr8_3:41368610-41368629 None:intergenic 25.0%
! TGAAGCTCAAAATTACTAAA+AGG + chr8_3:41368616-41368635 None:intergenic 25.0%
! CTGTAAACAACTAATAAACT+AGG + chr8_3:41368714-41368733 None:intergenic 25.0%
! GCTATTATTATCTTGTATCA+CGG - chr8_3:41368830-41368849 Msa1288420:intron 25.0%
!! GGAGTATTTAAATTAAGAGT+GGG + chr8_3:41368977-41368996 None:intergenic 25.0%
! TTCCAGAAATATGCTATATT+TGG - chr8_3:41369282-41369301 Msa1288420:intron 25.0%
! TACCAAATATAGCATATTTC+TGG + chr8_3:41369287-41369306 None:intergenic 25.0%
! AAATTTGGGAAATATTACAC+TGG - chr8_3:41369358-41369377 Msa1288420:intron 25.0%
! ATAAATTTGATGCATTGAGA+AGG + chr8_3:41369411-41369430 None:intergenic 25.0%
! AGAATATCTACTATTTACCA+AGG + chr8_3:41369568-41369587 None:intergenic 25.0%
! TAGAAAAGCAACATAAAGAT+GGG + chr8_3:41369631-41369650 None:intergenic 25.0%
! TTAGAAAAGCAACATAAAGA+TGG + chr8_3:41369632-41369651 None:intergenic 25.0%
!! TTGGAATTACCATATCTTTT+AGG - chr8_3:41369836-41369855 Msa1288420:CDS 25.0%
! TTTACGTATCCTAAAAGATA+TGG + chr8_3:41369848-41369867 None:intergenic 25.0%
! TTGGTAGCAACAAGTAAAAA+CGG - chr8_3:41362661-41362680 Msa1288420:three_prime_UTR 30.0%
TCGTATCAATCCAAACAAAA+AGG - chr8_3:41362686-41362705 Msa1288420:three_prime_UTR 30.0%
! AGGCTTTTGTAAAACAGTTA+CGG - chr8_3:41362706-41362725 Msa1288420:three_prime_UTR 30.0%
! TTAGTTTGATTGATTACCTG+TGG + chr8_3:41362806-41362825 None:intergenic 30.0%
CAGTTTAAAAACAACTGTGA+AGG + chr8_3:41362862-41362881 None:intergenic 30.0%
TCAAATAAGTCAATCCAAAC+AGG + chr8_3:41363208-41363227 None:intergenic 30.0%
! TAAACTTTTGTGAGACTGTA+TGG - chr8_3:41363243-41363262 Msa1288420:intron 30.0%
! AAACTTTTGTGAGACTGTAT+GGG - chr8_3:41363244-41363263 Msa1288420:intron 30.0%
! AGTTGTTTCATAAGCTATCT+TGG + chr8_3:41363333-41363352 None:intergenic 30.0%
AATAAAATTAAAGGCCCGTT+TGG + chr8_3:41363573-41363592 None:intergenic 30.0%
AACTTAGACAAAGTGCATAT+AGG + chr8_3:41363676-41363695 None:intergenic 30.0%
! GTTTTTCCCAATTGAATTGA+AGG + chr8_3:41364128-41364147 None:intergenic 30.0%
GTCATGGTAACATTAAAACA+AGG - chr8_3:41364214-41364233 Msa1288420:intron 30.0%
TGAAGTTAAAGAATGTAGAC+AGG - chr8_3:41364446-41364465 Msa1288420:intron 30.0%
GAAGTTAAAGAATGTAGACA+GGG - chr8_3:41364447-41364466 Msa1288420:intron 30.0%
GTTGGAAGAAAAAAGAAGTT+TGG - chr8_3:41364486-41364505 Msa1288420:intron 30.0%
AGATAATTGACAGTAAGCAA+GGG + chr8_3:41364520-41364539 None:intergenic 30.0%
AAGATAATTGACAGTAAGCA+AGG + chr8_3:41364521-41364540 None:intergenic 30.0%
! GCTTACTGTCAATTATCTTT+TGG - chr8_3:41364522-41364541 Msa1288420:intron 30.0%
TATATGTTATGAAGCTTGTG+AGG - chr8_3:41364577-41364596 Msa1288420:intron 30.0%
ATTAGTTACATGAGTTCAGA+AGG + chr8_3:41364640-41364659 None:intergenic 30.0%
! AATTGTGAACACTTTTCTCT+AGG - chr8_3:41364798-41364817 Msa1288420:intron 30.0%
ACATGTTCAAAAGAATCATC+TGG + chr8_3:41365027-41365046 None:intergenic 30.0%
! GATGATTCTTTTGAACATGT+CGG - chr8_3:41365027-41365046 Msa1288420:intron 30.0%
AACAGTTCATTGAGAAAGAA+AGG - chr8_3:41365150-41365169 Msa1288420:intron 30.0%
ACAGTTCATTGAGAAAGAAA+GGG - chr8_3:41365151-41365170 Msa1288420:intron 30.0%
! TTTTACTTTGAATTCTGGTG+TGG - chr8_3:41365238-41365257 Msa1288420:intron 30.0%
!!! ACAACTAGTTTTGAAAGAAG+TGG - chr8_3:41365298-41365317 Msa1288420:intron 30.0%
CCATTAAGTTTAAATTCACC+AGG + chr8_3:41365586-41365605 None:intergenic 30.0%
CCTGGTGAATTTAAACTTAA+TGG - chr8_3:41365583-41365602 Msa1288420:intron 30.0%
!! TGTGGCTTTATGTTAATTAC+TGG - chr8_3:41365618-41365637 Msa1288420:intron 30.0%
AAAATCAATGCTATTGTACG+AGG + chr8_3:41365647-41365666 None:intergenic 30.0%
! AGGACCAATTTTTAATAGCT+TGG - chr8_3:41365760-41365779 Msa1288420:intron 30.0%
AATGTTGTGATATTGCTATC+AGG - chr8_3:41365801-41365820 Msa1288420:intron 30.0%
ACTTAAATATCTTTCAGGCA+TGG + chr8_3:41366009-41366028 None:intergenic 30.0%
ATAGACATAAAGCAAACTAC+AGG + chr8_3:41366072-41366091 None:intergenic 30.0%
! TGTCTATCTGTGATTTTCTT+AGG - chr8_3:41366085-41366104 Msa1288420:intron 30.0%
!! AGGCAGAATTTCTAGAATAA+TGG - chr8_3:41366124-41366143 Msa1288420:intron 30.0%
TGAAGATTGCAAACAAATGA+AGG - chr8_3:41366169-41366188 Msa1288420:intron 30.0%
GAAGGATTTATTATTGGTGT+AGG - chr8_3:41366187-41366206 Msa1288420:intron 30.0%
ATTGAAAGAGTCGATACAAA+AGG - chr8_3:41366213-41366232 Msa1288420:intron 30.0%
GAATTATCAAATGTGAAAGG+AGG + chr8_3:41366289-41366308 None:intergenic 30.0%
AAATAATCCTCAATTGGTAG+GGG + chr8_3:41366348-41366367 None:intergenic 30.0%
!! AAGTTGATAAGTTTGTTAGG+TGG + chr8_3:41366412-41366431 None:intergenic 30.0%
!!! TTTGTCCTTGTTTTGTTATG+AGG - chr8_3:41366520-41366539 Msa1288420:intron 30.0%
! AAAAAAATGCCACTTGAACT+TGG - chr8_3:41366662-41366681 Msa1288420:intron 30.0%
! AAAAAATGCCACTTGAACTT+GGG - chr8_3:41366663-41366682 Msa1288420:intron 30.0%
CTGCAATAAGATCAAGTATA+TGG + chr8_3:41366753-41366772 None:intergenic 30.0%
CATATACTTGATCTTATTGC+AGG - chr8_3:41366751-41366770 Msa1288420:CDS 30.0%
TTTCCTCTAATACGTTCTTA+TGG - chr8_3:41366854-41366873 Msa1288420:intron 30.0%
! ACTATTGTTTCGGTGTATAA+TGG + chr8_3:41366880-41366899 None:intergenic 30.0%
! AAGTTCTAGCTAATATCCAA+AGG + chr8_3:41366941-41366960 None:intergenic 30.0%
! GATATTTGGAGTCATAAACT+CGG + chr8_3:41367038-41367057 None:intergenic 30.0%
GTTAACTACATCACGATATT+TGG + chr8_3:41367052-41367071 None:intergenic 30.0%
TCGTGGTATAATTACACATT+TGG - chr8_3:41367167-41367186 Msa1288420:intron 30.0%
AAACAAGGACAAAAGAACTT+GGG + chr8_3:41367352-41367371 None:intergenic 30.0%
ATGATTCACATCAAGAAACA+AGG + chr8_3:41367367-41367386 None:intergenic 30.0%
! TTGTTTCTTGATGTGAATCA+TGG - chr8_3:41367366-41367385 Msa1288420:intron 30.0%
TGTTTCTTGATGTGAATCAT+GGG - chr8_3:41367367-41367386 Msa1288420:intron 30.0%
TTTATGTGATTCTGGGTTTA+AGG - chr8_3:41367440-41367459 Msa1288420:intron 30.0%
TGATAGGAGATGGAAAAAAT+TGG - chr8_3:41367472-41367491 Msa1288420:CDS 30.0%
! GAAATTTGTTTCAGAAGTTG+AGG - chr8_3:41367721-41367740 Msa1288420:intron 30.0%
TGAAAACTGAGAATTAGTTG+AGG - chr8_3:41367781-41367800 Msa1288420:intron 30.0%
GAAAACTGAGAATTAGTTGA+GGG - chr8_3:41367782-41367801 Msa1288420:intron 30.0%
GTGTTTATTTGAGTATGTGT+TGG + chr8_3:41367878-41367897 None:intergenic 30.0%
ACATACTCAAATAAACACAC+AGG - chr8_3:41367880-41367899 Msa1288420:intron 30.0%
CATACTCAAATAAACACACA+GGG - chr8_3:41367881-41367900 Msa1288420:intron 30.0%
! GTCATTCATCCATTACATTT+TGG + chr8_3:41368268-41368287 None:intergenic 30.0%
!! AATGTAATGGATGAATGACA+AGG - chr8_3:41368269-41368288 Msa1288420:intron 30.0%
TGTTTATGCTTGGAGAATAT+GGG + chr8_3:41368410-41368429 None:intergenic 30.0%
TTGTTTATGCTTGGAGAATA+TGG + chr8_3:41368411-41368430 None:intergenic 30.0%
! GTATCTTTGTTCATGTTTTC+TGG + chr8_3:41368443-41368462 None:intergenic 30.0%
! TTCAGTTTATAGAGTTGGTT+GGG + chr8_3:41368553-41368572 None:intergenic 30.0%
! TTTCAGTTTATAGAGTTGGT+TGG + chr8_3:41368554-41368573 None:intergenic 30.0%
TTTGTCTATTGATGTTGAGA+TGG - chr8_3:41368647-41368666 Msa1288420:CDS 30.0%
!!! TGAGATGGTTTGTTTTGATT+AGG - chr8_3:41368662-41368681 Msa1288420:CDS 30.0%
!!! GTTTGTTTTGATTAGGTCTA+TGG - chr8_3:41368669-41368688 Msa1288420:CDS 30.0%
AACAACTAATAAACTAGGCA+TGG + chr8_3:41368709-41368728 None:intergenic 30.0%
GTTACAACTTTACAAGTCTA+TGG - chr8_3:41368858-41368877 Msa1288420:intron 30.0%
!! GGGAGTATTTAAATTAAGAG+TGG + chr8_3:41368978-41368997 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr8_3:41369236-41369255 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr8_3:41369237-41369256 Msa1288420:intron 30.0%
TAACCAACTTGTACTATTCT+AGG + chr8_3:41369495-41369514 None:intergenic 30.0%
AGAAAAGCAACATAAAGATG+GGG + chr8_3:41369630-41369649 None:intergenic 30.0%
!!! CTCTATTTTTTTGATCCAGT+TGG - chr8_3:41369674-41369693 Msa1288420:CDS 30.0%
! TTTTTGATCCAGTTGGTTAA+CGG - chr8_3:41369681-41369700 Msa1288420:CDS 30.0%
TTACAACACTAGAGTTCTTA+TGG + chr8_3:41369784-41369803 None:intergenic 30.0%
TAAGAACTCTAGTGTTGTAA+AGG - chr8_3:41369784-41369803 Msa1288420:intron 30.0%
AAAAGTTGCTCAAAACTCAC+AGG + chr8_3:41362636-41362655 None:intergenic 35.0%
! TTTGAGCAACTTTTCCATCT+TGG - chr8_3:41362642-41362661 Msa1288420:three_prime_UTR 35.0%
! TTTACTTGTTGCTACCAAGA+TGG + chr8_3:41362659-41362678 None:intergenic 35.0%
! GTGAAGGTGTAAAATTGAAG+TGG + chr8_3:41362846-41362865 None:intergenic 35.0%
! CTGTTTTCGGTTTTTACCTT+GGG + chr8_3:41363023-41363042 None:intergenic 35.0%
!!! ATTGGTTTTGCCATCCAAAA+AGG + chr8_3:41363073-41363092 None:intergenic 35.0%
CTTATGATGTGTTGAGAAGT+TGG - chr8_3:41363284-41363303 Msa1288420:intron 35.0%
TGTTTCATAAGCTATCTTGG+AGG + chr8_3:41363330-41363349 None:intergenic 35.0%
GTTATTTGGTTGAGTAGAGA+AGG - chr8_3:41363706-41363725 Msa1288420:intron 35.0%
!!! TGTTTTGGAGTTGATGATGA+TGG - chr8_3:41363843-41363862 Msa1288420:intron 35.0%
!!! GTTTTGGAGTTGATGATGAT+GGG - chr8_3:41363844-41363863 Msa1288420:intron 35.0%
!!! TTTTGGAGTTGATGATGATG+GGG - chr8_3:41363845-41363864 Msa1288420:intron 35.0%
! CAAGATTCGAATTTTGCGAA+AGG + chr8_3:41363919-41363938 None:intergenic 35.0%
TTCGCAAAATTCGAATCTTG+CGG - chr8_3:41363919-41363938 Msa1288420:intron 35.0%
!!! TCGTTTGCTTGTTATGCTTT+TGG - chr8_3:41364012-41364031 Msa1288420:intron 35.0%
ACCGTTCCTTCAATTCAATT+GGG - chr8_3:41364119-41364138 Msa1288420:intron 35.0%
TCCCAATTGAATTGAAGGAA+CGG + chr8_3:41364123-41364142 None:intergenic 35.0%
AATGTGAATGGACAAATCAG+CGG - chr8_3:41364288-41364307 Msa1288420:intron 35.0%
!! GGTGATGTTATTTGTTGTGT+TGG - chr8_3:41364468-41364487 Msa1288420:intron 35.0%
CTTTGTGATGTTAACAAGCA+TGG + chr8_3:41365055-41365074 None:intergenic 35.0%
TTGTTAACATCACAAAGCAG+CGG - chr8_3:41365058-41365077 Msa1288420:intron 35.0%
CAGTTCATTGAGAAAGAAAG+GGG - chr8_3:41365152-41365171 Msa1288420:intron 35.0%
GATAGAAATCCCAACTATGT+TGG - chr8_3:41365459-41365478 Msa1288420:intron 35.0%
AAATGATAGGTGGCAGAAAA+GGG + chr8_3:41365488-41365507 None:intergenic 35.0%
!! TAATGGATTTGCTTGAGTTG+TGG - chr8_3:41365600-41365619 Msa1288420:intron 35.0%
! TGTATGGGCTAAACTTAATG+AGG - chr8_3:41365740-41365759 Msa1288420:intron 35.0%
! CAAATTCTGTAGCTGATTCT+CGG + chr8_3:41365860-41365879 None:intergenic 35.0%
!! TCAGCTACAGAATTTGCTTT+TGG - chr8_3:41365864-41365883 Msa1288420:CDS 35.0%
! TTTTGGTATCTGAGTTTCTC+TGG - chr8_3:41365881-41365900 Msa1288420:CDS 35.0%
ATGCAAACGATAATGCTTTG+AGG + chr8_3:41365963-41365982 None:intergenic 35.0%
GCATTATCGTTTGCATATTG+AGG - chr8_3:41365967-41365986 Msa1288420:CDS 35.0%
AAACTACAGGCATTATCAAG+CGG + chr8_3:41366059-41366078 None:intergenic 35.0%
!!! GTTGCTAACGGTTGTTATTT+TGG + chr8_3:41366390-41366409 None:intergenic 35.0%
ATTATCTTCCGTGTCCATTT+GGG - chr8_3:41366497-41366516 Msa1288420:intron 35.0%
AAAACAAGGACAAACCCAAA+TGG + chr8_3:41366514-41366533 None:intergenic 35.0%
! CGAATTTCTGGATCATTAAC+AGG + chr8_3:41366713-41366732 None:intergenic 35.0%
AATACTTGAGTGCGAATTTC+TGG + chr8_3:41366725-41366744 None:intergenic 35.0%
AGAAATTCGCACTCAAGTAT+TGG - chr8_3:41366724-41366743 Msa1288420:CDS 35.0%
TCTGAGAGAGACTATTGTTT+CGG + chr8_3:41366890-41366909 None:intergenic 35.0%
AAGGACAATTAAATGAGTCG+TGG - chr8_3:41367150-41367169 Msa1288420:intron 35.0%
AATCGCTCGGAAATAATAGA+GGG + chr8_3:41367227-41367246 None:intergenic 35.0%
AAATCGCTCGGAAATAATAG+AGG + chr8_3:41367228-41367247 None:intergenic 35.0%
AACAAGGACAAAAGAACTTG+GGG + chr8_3:41367351-41367370 None:intergenic 35.0%
GAAACAAGGACAAAAGAACT+TGG + chr8_3:41367353-41367372 None:intergenic 35.0%
GTTTCTTGATGTGAATCATG+GGG - chr8_3:41367368-41367387 Msa1288420:intron 35.0%
!! GGTATGGTTAATTGGTTCTA+AGG - chr8_3:41367399-41367418 Msa1288420:intron 35.0%
GAATTGAGTATGATAGGAGA+TGG - chr8_3:41367462-41367481 Msa1288420:CDS 35.0%
ACGGTTCACTATAGATACAA+TGG - chr8_3:41367627-41367646 Msa1288420:intron 35.0%
ACAATGGACATTCAATCGAA+TGG - chr8_3:41367643-41367662 Msa1288420:intron 35.0%
CGACACAGTTACTTATTTGA+CGG - chr8_3:41367685-41367704 Msa1288420:intron 35.0%
CAGTTACTTATTTGACGGAA+AGG - chr8_3:41367690-41367709 Msa1288420:intron 35.0%
CTAGGCCAATGGTAAAATAA+AGG + chr8_3:41367852-41367871 None:intergenic 35.0%
!! TTATTTTACCATTGGCCTAG+TGG - chr8_3:41367852-41367871 Msa1288420:intron 35.0%
! TGACATTTTATGACGAATCC+CGG + chr8_3:41367936-41367955 None:intergenic 35.0%
! AATAGTGGGGATGTGATATT+AGG - chr8_3:41367979-41367998 Msa1288420:intron 35.0%
! ATAGTGGGGATGTGATATTA+GGG - chr8_3:41367980-41367999 Msa1288420:intron 35.0%
CAAAGTTACAGCAAACTTGA+GGG - chr8_3:41368149-41368168 Msa1288420:intron 35.0%
! TTTGCGACTTTGTTTATGCT+TGG + chr8_3:41368420-41368439 None:intergenic 35.0%
GGTTAATCGCAAACTTGAAA+CGG + chr8_3:41368465-41368484 None:intergenic 35.0%
GAGCTTTCAGTTTATAGAGT+TGG + chr8_3:41368558-41368577 None:intergenic 35.0%
ACTAAAAGGTGAAGGATGAT+GGG + chr8_3:41368602-41368621 None:intergenic 35.0%
TACTAAAAGGTGAAGGATGA+TGG + chr8_3:41368603-41368622 None:intergenic 35.0%
!! TTTTGATTAGGTCTATGGTC+TGG - chr8_3:41368674-41368693 Msa1288420:CDS 35.0%
TGGAAATTTAAACCTCAGTC+TGG - chr8_3:41368933-41368952 Msa1288420:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr8_3:41369002-41369021 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr8_3:41369102-41369121 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr8_3:41369106-41369125 None:intergenic 35.0%
!! TTGCTTTATCGACTTGAGAT+TGG - chr8_3:41369323-41369342 Msa1288420:intron 35.0%
!! TATCGACTTGAGATTGGATT+AGG - chr8_3:41369329-41369348 Msa1288420:intron 35.0%
AACATAAAGATGGGGATTGT+GGG + chr8_3:41369622-41369641 None:intergenic 35.0%
CATTGTTGCTAAACTTAGGA+GGG - chr8_3:41369984-41370003 Msa1288420:five_prime_UTR 35.0%
TTTGTAAAACAGTTACGGCG+AGG - chr8_3:41362711-41362730 Msa1288420:three_prime_UTR 40.0%
TTGTAAAACAGTTACGGCGA+GGG - chr8_3:41362712-41362731 Msa1288420:three_prime_UTR 40.0%
GGGAGAGTAGTAAGAAAGAA+TGG - chr8_3:41362736-41362755 Msa1288420:three_prime_UTR 40.0%
GTAGTAAGAAAGAATGGCGA+CGG - chr8_3:41362742-41362761 Msa1288420:three_prime_UTR 40.0%
TGATTGATTACCTGTGGTGA+TGG + chr8_3:41362800-41362819 None:intergenic 40.0%
TTTACTGGTACAGATCACGA+AGG - chr8_3:41362890-41362909 Msa1288420:CDS 40.0%
TAATCCGCGAACTATGTCAA+CGG + chr8_3:41362919-41362938 None:intergenic 40.0%
! CCTGTTTTCGGTTTTTACCT+TGG + chr8_3:41363024-41363043 None:intergenic 40.0%
CCAAGGTAAAAACCGAAAAC+AGG - chr8_3:41363021-41363040 Msa1288420:CDS 40.0%
GAAGTTGTGTTTACGAGGAT+TGG + chr8_3:41363091-41363110 None:intergenic 40.0%
AACAATACTATGGGCCTGTT+TGG - chr8_3:41363191-41363210 Msa1288420:intron 40.0%
AAGTGCATATAGGTCCTCTT+TGG + chr8_3:41363666-41363685 None:intergenic 40.0%
! GTTGTTTCAGGAAGTTTCTG+AGG - chr8_3:41363871-41363890 Msa1288420:intron 40.0%
GAGACTTGTGGAAACAACAA+TGG - chr8_3:41363958-41363977 Msa1288420:intron 40.0%
AATCTCACTCAACTTGATGC+TGG - chr8_3:41364037-41364056 Msa1288420:intron 40.0%
! ATAAAAGCACACCTGAAGCA+AGG + chr8_3:41364071-41364090 None:intergenic 40.0%
GACCGTTCCTTCAATTCAAT+TGG - chr8_3:41364118-41364137 Msa1288420:intron 40.0%
! GGGATTTGACTCTTTTGAAC+TGG - chr8_3:41364235-41364254 Msa1288420:intron 40.0%
!! CTGTCAGATTGATGATGAGA+AGG - chr8_3:41364545-41364564 Msa1288420:intron 40.0%
AGAACCACACATGAGAAGAA+CGG - chr8_3:41364609-41364628 Msa1288420:intron 40.0%
! AGACTAATGCCTACTGATTG+TGG - chr8_3:41364748-41364767 Msa1288420:intron 40.0%
TGTTAACATCACAAAGCAGC+GGG - chr8_3:41365059-41365078 Msa1288420:intron 40.0%
CTGCTTTCAGTTTCCTAGTA+TGG - chr8_3:41365200-41365219 Msa1288420:intron 40.0%
CTTGGCTAAGTCAAACATTG+TGG - chr8_3:41365371-41365390 Msa1288420:intron 40.0%
AATGATAGGTGGCAGAAAAG+GGG + chr8_3:41365487-41365506 None:intergenic 40.0%
CAAATGATAGGTGGCAGAAA+AGG + chr8_3:41365489-41365508 None:intergenic 40.0%
CTTGAGTCTTGACTCTTGTT+TGG - chr8_3:41365558-41365577 Msa1288420:intron 40.0%
TGATATTGCTATCAGGTCTC+TGG - chr8_3:41365808-41365827 Msa1288420:intron 40.0%
AGAGTGTATAACCTTGTTGC+CGG + chr8_3:41365929-41365948 None:intergenic 40.0%
TAGGATCCTTTCTTTGAGCT+AGG - chr8_3:41366104-41366123 Msa1288420:intron 40.0%
ATTCTGCCTAGCTCAAAGAA+AGG + chr8_3:41366113-41366132 None:intergenic 40.0%
AGATGATAACCTTGCACACA+AGG - chr8_3:41366246-41366265 Msa1288420:intron 40.0%
TATCTTTCCCCTACCAATTG+AGG - chr8_3:41366338-41366357 Msa1288420:intron 40.0%
! GTTTGTTAGGTGGTTGCTAA+CGG + chr8_3:41366402-41366421 None:intergenic 40.0%
GACACGGAAGATAATCCATT+AGG + chr8_3:41366492-41366511 None:intergenic 40.0%
GATTATCTTCCGTGTCCATT+TGG - chr8_3:41366496-41366515 Msa1288420:intron 40.0%
! TTTTACGCAGATCTACAGTG+AGG - chr8_3:41366631-41366650 Msa1288420:intron 40.0%
TGGCCATAAGAACGTATTAG+AGG + chr8_3:41366860-41366879 None:intergenic 40.0%
TAGATTCATGTAGACTCACC+TGG - chr8_3:41367116-41367135 Msa1288420:intron 40.0%
GGTAAAGATGTTGGATCTGT+GGG - chr8_3:41367300-41367319 Msa1288420:intron 40.0%
AGAATTAGTTGAGGGACCAT+TGG - chr8_3:41367790-41367809 Msa1288420:intron 40.0%
ACTCAAATAAACACACAGGG+AGG - chr8_3:41367884-41367903 Msa1288420:intron 40.0%
CTCAAATAAACACACAGGGA+GGG - chr8_3:41367885-41367904 Msa1288420:intron 40.0%
TCAAATAAACACACAGGGAG+GGG - chr8_3:41367886-41367905 Msa1288420:intron 40.0%
! GACATTTTATGACGAATCCC+GGG + chr8_3:41367935-41367954 None:intergenic 40.0%
!! CCTCAAGTTTGCTGTAACTT+TGG + chr8_3:41368151-41368170 None:intergenic 40.0%
CCAAAGTTACAGCAAACTTG+AGG - chr8_3:41368148-41368167 Msa1288420:intron 40.0%
! ATTAAGCCACGAGTTTTCAG+CGG - chr8_3:41368184-41368203 Msa1288420:intron 40.0%
ACTGTCATTCTAGACATCTG+GGG + chr8_3:41368223-41368242 None:intergenic 40.0%
CACTGTCATTCTAGACATCT+GGG + chr8_3:41368224-41368243 None:intergenic 40.0%
ATGGGTTCACGTTTGCATTT+GGG + chr8_3:41368363-41368382 None:intergenic 40.0%
AACCGGAAATTAGTTCCAGT+GGG - chr8_3:41368498-41368517 Msa1288420:intron 40.0%
TTCACGTAGTTCGATAACCT+TGG - chr8_3:41368885-41368904 Msa1288420:intron 40.0%
TCACGTAGTTCGATAACCTT+GGG - chr8_3:41368886-41368905 Msa1288420:intron 40.0%
CATTTAATCAAGCCAGACTG+AGG + chr8_3:41368948-41368967 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr8_3:41369241-41369260 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr8_3:41369103-41369122 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8_3:41369241-41369260 Msa1288420:intron 40.0%
! TGGATTAGGAGAGCGAAATT+TGG - chr8_3:41369343-41369362 Msa1288420:intron 40.0%
GGATTAGGAGAGCGAAATTT+GGG - chr8_3:41369344-41369363 Msa1288420:intron 40.0%
! AGAGCCTTTTGGTCTGTAAA+TGG - chr8_3:41369468-41369487 Msa1288420:intron 40.0%
! GAGCCTTTTGGTCTGTAAAT+GGG - chr8_3:41369469-41369488 Msa1288420:intron 40.0%
!! ACAAGTTGGTTATGAAGACG+AGG - chr8_3:41369503-41369522 Msa1288420:intron 40.0%
GAGGAAGATCCAAAAGTGAT+GGG - chr8_3:41369522-41369541 Msa1288420:intron 40.0%
ACATAAAGATGGGGATTGTG+GGG + chr8_3:41369621-41369640 None:intergenic 40.0%
CAACATAAAGATGGGGATTG+TGG + chr8_3:41369623-41369642 None:intergenic 40.0%
CCTAAGTTTAGCAACAATGG+AGG + chr8_3:41369983-41370002 None:intergenic 40.0%
CCTCCATTGTTGCTAAACTT+AGG - chr8_3:41369980-41369999 Msa1288420:five_prime_UTR 40.0%
CCTCCTAAGTTTAGCAACAA+TGG + chr8_3:41369986-41370005 None:intergenic 40.0%
CCATTGTTGCTAAACTTAGG+AGG - chr8_3:41369983-41370002 Msa1288420:five_prime_UTR 40.0%
CTTATCTTCTCCATCACCAC+AGG - chr8_3:41362787-41362806 Msa1288420:three_prime_UTR 45.0%
! GACATAGTTCGCGGATTAAC+CGG - chr8_3:41362921-41362940 Msa1288420:CDS 45.0%
TTCGCGAAGTTGTGTTTACG+AGG + chr8_3:41363096-41363115 None:intergenic 45.0%
AGCTTATGCGATAGCAACTC+AGG - chr8_3:41363356-41363375 Msa1288420:intron 45.0%
GCTTATGCGATAGCAACTCA+GGG - chr8_3:41363357-41363376 Msa1288420:intron 45.0%
!! ATGATGGGGTGTGTTGTTTC+AGG - chr8_3:41363859-41363878 Msa1288420:intron 45.0%
GCAAAATTCGAATCTTGCGG+AGG - chr8_3:41363922-41363941 Msa1288420:intron 45.0%
!! TGGTACTGATTCCTTGCTTC+AGG - chr8_3:41364057-41364076 Msa1288420:intron 45.0%
!! ATTGATGATGAGAAGGTGCG+TGG - chr8_3:41364552-41364571 Msa1288420:intron 45.0%
AACATGCCACAAGATCCAAC+AGG + chr8_3:41364774-41364793 None:intergenic 45.0%
AGCTTCTACTCGACCCAAAA+CGG - chr8_3:41365091-41365110 Msa1288420:intron 45.0%
! GTTTCAAGAGACCCCGTTTT+GGG + chr8_3:41365107-41365126 None:intergenic 45.0%
! TGTTTCAAGAGACCCCGTTT+TGG + chr8_3:41365108-41365127 None:intergenic 45.0%
CTAGGAAACTGAAAGCAGTG+AGG + chr8_3:41365198-41365217 None:intergenic 45.0%
CAAGCATCAGACAATCAGCA+AGG + chr8_3:41365355-41365374 None:intergenic 45.0%
! CTTGCTGATTGTCTGATGCT+TGG - chr8_3:41365353-41365372 Msa1288420:intron 45.0%
CAAACATTGTGGCCCCAAAA+AGG - chr8_3:41365382-41365401 Msa1288420:intron 45.0%
!! AAAGGGGTGCCAACATAGTT+GGG + chr8_3:41365471-41365490 None:intergenic 45.0%
!! AAAAGGGGTGCCAACATAGT+TGG + chr8_3:41365472-41365491 None:intergenic 45.0%
! CTTGACTCTTGTTTGGTTCC+TGG - chr8_3:41365565-41365584 Msa1288420:intron 45.0%
AGGCATTATCAAGCGGAAAG+TGG + chr8_3:41366052-41366071 None:intergenic 45.0%
AGGACAAACCCAAATGGACA+CGG + chr8_3:41366508-41366527 None:intergenic 45.0%
CACATGGCTCTCAAACTACA+GGG + chr8_3:41367194-41367213 None:intergenic 45.0%
TTAGCGCGACTAAAATCGCT+CGG + chr8_3:41367240-41367259 None:intergenic 45.0%
GGGTAAAGATGTTGGATCTG+TGG - chr8_3:41367299-41367318 Msa1288420:intron 45.0%
! TTGAGTATGTGTTGGCCACT+AGG + chr8_3:41367870-41367889 None:intergenic 45.0%
CAAATAAACACACAGGGAGG+GGG - chr8_3:41367887-41367906 Msa1288420:intron 45.0%
ACTATTACAGCCCAGTGGTT+AGG + chr8_3:41367965-41367984 None:intergenic 45.0%
TAACCACTGGGCTGTAATAG+TGG - chr8_3:41367964-41367983 Msa1288420:intron 45.0%
AACCACTGGGCTGTAATAGT+GGG - chr8_3:41367965-41367984 Msa1288420:intron 45.0%
AACATTCCGCTGAAAACTCG+TGG + chr8_3:41368193-41368212 None:intergenic 45.0%
CCACTGTCATTCTAGACATC+TGG + chr8_3:41368225-41368244 None:intergenic 45.0%
! CCAGATGTCTAGAATGACAG+TGG - chr8_3:41368222-41368241 Msa1288420:intron 45.0%
GGCTTATGTTTCGTGCACTT+CGG + chr8_3:41368297-41368316 None:intergenic 45.0%
TGGGTTCACGTTTGCATTTG+GGG + chr8_3:41368362-41368381 None:intergenic 45.0%
! GATGGGTTCACGTTTGCATT+TGG + chr8_3:41368364-41368383 None:intergenic 45.0%
AAACGTGAACCCATCTGCAA+AGG - chr8_3:41368369-41368388 Msa1288420:intron 45.0%
AACCCAACAGACTGATGAAC+CGG - chr8_3:41368481-41368500 Msa1288420:intron 45.0%
TTCCGGTTCATCAGTCTGTT+GGG + chr8_3:41368486-41368505 None:intergenic 45.0%
TTTCCGGTTCATCAGTCTGT+TGG + chr8_3:41368487-41368506 None:intergenic 45.0%
GAACCGGAAATTAGTTCCAG+TGG - chr8_3:41368497-41368516 Msa1288420:intron 45.0%
AGCCCACTGGAACTAATTTC+CGG + chr8_3:41368503-41368522 None:intergenic 45.0%
AGTTCGATAACCTTGGGTGT+TGG - chr8_3:41368892-41368911 Msa1288420:intron 45.0%
!! ATAACCTTGGGTGTTGGAAG+TGG - chr8_3:41368898-41368917 Msa1288420:intron 45.0%
! GGTGTTGGAAGTGGTTACTT+TGG - chr8_3:41368907-41368926 Msa1288420:intron 45.0%
! GGAAGTGGTTACTTTGGCAA+TGG - chr8_3:41368913-41368932 Msa1288420:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr8_3:41369240-41369259 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr8_3:41369240-41369259 Msa1288420:intron 45.0%
GGTTTCTGTAAATTGCGTGC+TGG - chr8_3:41369379-41369398 Msa1288420:intron 45.0%
!! GTGAACTGCCATTGTTTTGC+AGG - chr8_3:41369434-41369453 Msa1288420:intron 45.0%
!! AACTGCCATTGTTTTGCAGG+AGG - chr8_3:41369437-41369456 Msa1288420:intron 45.0%
AGGCCCATTTACAGACCAAA+AGG + chr8_3:41369475-41369494 None:intergenic 45.0%
GGGCCTAGAATAGTACAAGT+TGG - chr8_3:41369489-41369508 Msa1288420:intron 45.0%
CGAGGAAGATCCAAAAGTGA+TGG - chr8_3:41369521-41369540 Msa1288420:intron 45.0%
! TCATACGCTCCCATCACTTT+TGG + chr8_3:41369534-41369553 None:intergenic 45.0%
GTATGAGCAACTAGGATCCT+TGG - chr8_3:41369548-41369567 Msa1288420:intron 45.0%
CATAAAGATGGGGATTGTGG+GGG + chr8_3:41369620-41369639 None:intergenic 45.0%
TAACTACTCTGTCGTCTCAG+TGG + chr8_3:41369727-41369746 None:intergenic 45.0%
!!! TTTTAATTAAATAAATGAAA+AGG - chr8_3:41368059-41368078 Msa1288420:intron 5.0%
!! TTTAATTAAATAAATGAAAA+GGG - chr8_3:41368060-41368079 Msa1288420:intron 5.0%
TAAAACAGTTACGGCGAGGG+AGG - chr8_3:41362715-41362734 Msa1288420:three_prime_UTR 50.0%
AAAACAGTTACGGCGAGGGA+GGG - chr8_3:41362716-41362735 Msa1288420:three_prime_UTR 50.0%
ATGTATGCCTTCCTCAGAGC+CGG + chr8_3:41362943-41362962 None:intergenic 50.0%
!!! CACTGCGCTACTAGCCTTTT+TGG - chr8_3:41363056-41363075 Msa1288420:CDS 50.0%
!!! GCGCTACTAGCCTTTTTGGA+TGG - chr8_3:41363060-41363079 Msa1288420:CDS 50.0%
AACTCAGGGCCCGTTTGAAT+AGG - chr8_3:41363371-41363390 Msa1288420:intron 50.0%
TTCGAATCTTGCGGAGGAGA+TGG - chr8_3:41363928-41363947 Msa1288420:intron 50.0%
GATGGTTCAGACGAGACTTG+TGG - chr8_3:41363946-41363965 Msa1288420:intron 50.0%
AAACGAGTGACACAGCACTC+AGG + chr8_3:41363998-41364017 None:intergenic 50.0%
CGTACCGTTCTTCTCATGTG+TGG + chr8_3:41364616-41364635 None:intergenic 50.0%
TCCAACAGGCCACAATCAGT+AGG + chr8_3:41364760-41364779 None:intergenic 50.0%
TTGTGGCCTGTTGGATCTTG+TGG - chr8_3:41364765-41364784 Msa1288420:intron 50.0%
GCTTCTACTCGACCCAAAAC+GGG - chr8_3:41365092-41365111 Msa1288420:intron 50.0%
CTTCTACTCGACCCAAAACG+GGG - chr8_3:41365093-41365112 Msa1288420:intron 50.0%
ACCAAGGGCTAAGCTTAGAG+TGG - chr8_3:41365690-41365709 Msa1288420:intron 50.0%
ACCACTCTAAGCTTAGCCCT+TGG + chr8_3:41365694-41365713 None:intergenic 50.0%
CTGGCCTGCATTACTTCTTC+CGG - chr8_3:41365900-41365919 Msa1288420:CDS 50.0%
GCTACCGGAAGAAGTAATGC+AGG + chr8_3:41365907-41365926 None:intergenic 50.0%
GCATTACTTCTTCCGGTAGC+CGG - chr8_3:41365907-41365926 Msa1288420:CDS 50.0%
! ATAACCTTGTTGCCGGCTAC+CGG + chr8_3:41365922-41365941 None:intergenic 50.0%
!! TGAAAGGAGGGTGCTCCTTT+GGG + chr8_3:41366276-41366295 None:intergenic 50.0%
TACGCAGATCTACAGTGAGG+AGG - chr8_3:41366634-41366653 Msa1288420:intron 50.0%
AGTGCAGTCCCAAGTTCAAG+TGG + chr8_3:41366674-41366693 None:intergenic 50.0%
TCACCTGGAATGAGAGCTCA+AGG - chr8_3:41367131-41367150 Msa1288420:intron 50.0%
TGTCCTTGAGCTCTCATTCC+AGG + chr8_3:41367137-41367156 None:intergenic 50.0%
GCACATGGCTCTCAAACTAC+AGG + chr8_3:41367195-41367214 None:intergenic 50.0%
TTGAGAGCCATGTGCGACTT+TGG - chr8_3:41367200-41367219 Msa1288420:intron 50.0%
CTTGATGTGAATCATGGGGC+AGG - chr8_3:41367372-41367391 Msa1288420:intron 50.0%
! CAGGCAGGGGTATGGTTAAT+TGG - chr8_3:41367391-41367410 Msa1288420:intron 50.0%
TGTCATCACAGCCTAACCAC+TGG - chr8_3:41367951-41367970 Msa1288420:intron 50.0%
GTCATCACAGCCTAACCACT+GGG - chr8_3:41367952-41367971 Msa1288420:intron 50.0%
ACCACTGGGCTGTAATAGTG+GGG - chr8_3:41367966-41367985 Msa1288420:intron 50.0%
AAACATAAGCCTCAGCTGCG+AGG - chr8_3:41368306-41368325 Msa1288420:intron 50.0%
GGTTCACGTTTGCATTTGGG+GGG + chr8_3:41368360-41368379 None:intergenic 50.0%
GGGTTCACGTTTGCATTTGG+GGG + chr8_3:41368361-41368380 None:intergenic 50.0%
TGTCCACCTCCTTTGCAGAT+GGG + chr8_3:41368381-41368400 None:intergenic 50.0%
ATGTCCACCTCCTTTGCAGA+TGG + chr8_3:41368382-41368401 None:intergenic 50.0%
ATTGTTCACCTCGTTGGAGC+TGG + chr8_3:41368530-41368549 None:intergenic 50.0%
GTTGGGATTGTTCACCTCGT+TGG + chr8_3:41368536-41368555 None:intergenic 50.0%
GGGACTAGATTCAGCTCGTA+GGG + chr8_3:41368582-41368601 None:intergenic 50.0%
TGGGACTAGATTCAGCTCGT+AGG + chr8_3:41368583-41368602 None:intergenic 50.0%
GTAACCACTTCCAACACCCA+AGG + chr8_3:41368905-41368924 None:intergenic 50.0%
ACCTGCCTCCTGCAAAACAA+TGG + chr8_3:41369445-41369464 None:intergenic 50.0%
! ATGGGAGCGTATGAGCAACT+AGG - chr8_3:41369540-41369559 Msa1288420:intron 50.0%
ATCCAGTTGGTTAACGGCAG+CGG - chr8_3:41369687-41369706 Msa1288420:CDS 50.0%
TACTCTGTCGTCTCAGTGGA+TGG + chr8_3:41369723-41369742 None:intergenic 50.0%
TATACACACCGCAGAGTGAG+CGG - chr8_3:41369900-41369919 Msa1288420:five_prime_UTR 50.0%
AGCATTTACCGCTCACTCTG+CGG + chr8_3:41369911-41369930 None:intergenic 50.0%
GCTGCCGTTGACATAGTTCG+CGG - chr8_3:41362912-41362931 Msa1288420:CDS 55.0%
!! GGATTAACCGGCTCTGAGGA+AGG - chr8_3:41362933-41362952 Msa1288420:CDS 55.0%
CTTGGGCGCAGTTAAGAGAC+GGG + chr8_3:41363006-41363025 None:intergenic 55.0%
CCTTGGGCGCAGTTAAGAGA+CGG + chr8_3:41363007-41363026 None:intergenic 55.0%
! GCCTACTGATTGTGGCCTGT+TGG - chr8_3:41364756-41364775 Msa1288420:intron 55.0%
TAACAGGTGCCTCAGCTGCT+CGG + chr8_3:41364824-41364843 None:intergenic 55.0%
! GCTGAGGCACCTGTTACTTG+AGG - chr8_3:41364828-41364847 Msa1288420:intron 55.0%
AACATCACAAAGCAGCGGGC+AGG - chr8_3:41365063-41365082 Msa1288420:intron 55.0%
ACATCACAAAGCAGCGGGCA+GGG - chr8_3:41365064-41365083 Msa1288420:intron 55.0%
!! TTGGGGTAGCCTTGTGTGCA+AGG + chr8_3:41366258-41366277 None:intergenic 55.0%
TGCACACAAGGCTACCCCAA+AGG - chr8_3:41366258-41366277 Msa1288420:intron 55.0%
!! GAAAGGAGGGTGCTCCTTTG+GGG + chr8_3:41366275-41366294 None:intergenic 55.0%
!! GTGAAAGGAGGGTGCTCCTT+TGG + chr8_3:41366277-41366296 None:intergenic 55.0%
AGAGGGACCAAAGTCGCACA+TGG + chr8_3:41367210-41367229 None:intergenic 55.0%
ATGTGAATCATGGGGCAGGC+AGG - chr8_3:41367376-41367395 Msa1288420:intron 55.0%
TGTGAATCATGGGGCAGGCA+GGG - chr8_3:41367377-41367396 Msa1288420:intron 55.0%
! TGTGTTGGCCACTAGGCCAA+TGG + chr8_3:41367863-41367882 None:intergenic 55.0%
ACGAATCCCGGGTTCGAACT+CGG + chr8_3:41367924-41367943 None:intergenic 55.0%
TCCCCACTATTACAGCCCAG+TGG + chr8_3:41367970-41367989 None:intergenic 55.0%
CGTTTGCATTTGGGGGGAGT+GGG + chr8_3:41368354-41368373 None:intergenic 55.0%
ACGTTTGCATTTGGGGGGAG+TGG + chr8_3:41368355-41368374 None:intergenic 55.0%
CGTGAACCCATCTGCAAAGG+AGG - chr8_3:41368372-41368391 Msa1288420:intron 55.0%
GAACCCATCTGCAAAGGAGG+TGG - chr8_3:41368375-41368394 Msa1288420:intron 55.0%
!! GCCATTGTTTTGCAGGAGGC+AGG - chr8_3:41369441-41369460 Msa1288420:intron 55.0%
! AGGCAGGTCGAAGAGCCTTT+TGG - chr8_3:41369457-41369476 Msa1288420:intron 55.0%
AAAGATGGGGATTGTGGGGG+AGG + chr8_3:41369617-41369636 None:intergenic 55.0%
TACCGCTGCCGTTAACCAAC+TGG + chr8_3:41369692-41369711 None:intergenic 55.0%
GTTGGTTAACGGCAGCGGTA+TGG - chr8_3:41369692-41369711 Msa1288420:CDS 55.0%
! TCGCGGATTAACCGGCTCTG+AGG - chr8_3:41362929-41362948 Msa1288420:CDS 60.0%
CCGTCTCTTAACTGCGCCCA+AGG - chr8_3:41363004-41363023 Msa1288420:CDS 60.0%
TTCTCTAGGCCGAGCAGCTG+AGG - chr8_3:41364812-41364831 Msa1288420:intron 60.0%
TCTTCCGGTAGCCGGCAACA+AGG - chr8_3:41365915-41365934 Msa1288420:CDS 60.0%
GTGAATCATGGGGCAGGCAG+GGG - chr8_3:41367378-41367397 Msa1288420:intron 60.0%
ACACACAGGGAGGGGGAATG+TGG - chr8_3:41367894-41367913 Msa1288420:intron 60.0%
TGGTGACCCGAGTTCGAACC+CGG - chr8_3:41367914-41367933 Msa1288420:intron 60.0%
CGAATCCCGGGTTCGAACTC+GGG + chr8_3:41367923-41367942 None:intergenic 60.0%
TGGAGCTGGATTCAGCCCAC+TGG + chr8_3:41368516-41368535 None:intergenic 60.0%
GGCTGAATCCAGCTCCAACG+AGG - chr8_3:41368519-41368538 Msa1288420:intron 60.0%
GGTTAACGGCAGCGGTATGG+AGG - chr8_3:41369695-41369714 Msa1288420:CDS 60.0%
TCACAAAGCAGCGGGCAGGG+AGG - chr8_3:41365067-41365086 Msa1288420:intron 65.0%
CACAAAGCAGCGGGCAGGGA+GGG - chr8_3:41365068-41365087 Msa1288420:intron 65.0%
TCATGGGGCAGGCAGGGGTA+TGG - chr8_3:41367383-41367402 Msa1288420:intron 65.0%
GGTGACCCGAGTTCGAACCC+GGG - chr8_3:41367915-41367934 Msa1288420:intron 65.0%
GATGCTCGACCTCGCAGCTG+AGG + chr8_3:41368318-41368337 None:intergenic 65.0%
GCTGCGAGGTCGAGCATCAC+AGG - chr8_3:41368320-41368339 Msa1288420:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 41362612 41370016 41362612 ID=Msa1288420;Name=Msa1288420
chr8_3 mRNA 41362612 41370016 41362612 ID=Msa1288420-mRNA-1;Parent=Msa1288420;Name=Msa1288420-mRNA-1;_AED=0.14;_eAED=0.14;_QI=143|0.85|0.75|1|0.85|0.75|8|273|369
chr8_3 exon 41362612 41363172 41362612 ID=Msa1288420-mRNA-1:exon:11351;Parent=Msa1288420-mRNA-1
chr8_3 exon 41365856 41365987 41365856 ID=Msa1288420-mRNA-1:exon:11350;Parent=Msa1288420-mRNA-1
chr8_3 exon 41366692 41366805 41366692 ID=Msa1288420-mRNA-1:exon:11349;Parent=Msa1288420-mRNA-1
chr8_3 exon 41367455 41367600 41367455 ID=Msa1288420-mRNA-1:exon:11348;Parent=Msa1288420-mRNA-1
chr8_3 exon 41367998 41368076 41367998 ID=Msa1288420-mRNA-1:exon:11347;Parent=Msa1288420-mRNA-1
chr8_3 exon 41368550 41368743 41368550 ID=Msa1288420-mRNA-1:exon:11346;Parent=Msa1288420-mRNA-1
chr8_3 exon 41369623 41369725 41369623 ID=Msa1288420-mRNA-1:exon:11345;Parent=Msa1288420-mRNA-1
chr8_3 exon 41369820 41370016 41369820 ID=Msa1288420-mRNA-1:exon:11344;Parent=Msa1288420-mRNA-1
chr8_3 five_prime_UTR 41369874 41370016 41369874 ID=Msa1288420-mRNA-1:five_prime_utr;Parent=Msa1288420-mRNA-1
chr8_3 CDS 41369820 41369873 41369820 ID=Msa1288420-mRNA-1:cds;Parent=Msa1288420-mRNA-1
chr8_3 CDS 41369623 41369725 41369623 ID=Msa1288420-mRNA-1:cds;Parent=Msa1288420-mRNA-1
chr8_3 CDS 41368550 41368743 41368550 ID=Msa1288420-mRNA-1:cds;Parent=Msa1288420-mRNA-1
chr8_3 CDS 41367998 41368076 41367998 ID=Msa1288420-mRNA-1:cds;Parent=Msa1288420-mRNA-1
chr8_3 CDS 41367455 41367600 41367455 ID=Msa1288420-mRNA-1:cds;Parent=Msa1288420-mRNA-1
chr8_3 CDS 41366692 41366805 41366692 ID=Msa1288420-mRNA-1:cds;Parent=Msa1288420-mRNA-1
chr8_3 CDS 41365856 41365987 41365856 ID=Msa1288420-mRNA-1:cds;Parent=Msa1288420-mRNA-1
chr8_3 CDS 41362885 41363172 41362885 ID=Msa1288420-mRNA-1:cds;Parent=Msa1288420-mRNA-1
chr8_3 three_prime_UTR 41362612 41362884 41362612 ID=Msa1288420-mRNA-1:three_prime_utr;Parent=Msa1288420-mRNA-1
Gene Sequence

>Msa1288420

ATGGCGACGGAGCTTGAAGAACTAGTGAGCTTCTTATCTTCTCCATCACCACAGATCACGAAGGCTGCCGTTGACATAGTTCGCGGATTAACCGGCTCTGAGGAAGGCATACATTCCCTAGCTAATCAATCAAAAAACTTGATTTCGGCTTTGTCCCTTTCTGAGGCTGCTGCTGAAGCTCTTGTGAACCTTTCGCAAAATTCGAATCTTGCGGAGGAGATGGTTCAGACGAGACTTGTGGAAACAACAATGGATGTTTTGTATAAGCCTGAGTGCTGTGTCACTCGTTTGCTTGTTATGCTTTTGGTTAATCTCACTCAACTTGATGCTGGTACTGATTCCTTGCTTCAGATTGATGATGAGAAGGTGCGTGGATTATATGTTATGAAGCTTGTGAGGTCATTTTGTAGAACCACACATGAGAAGAACGATGATTCTTTTGAACATGTCGGTTCCATGCTTGTTAACATCACAAAGCAGCGGGCAGGGAGGGAGCTTCTACTCGACCCAAAACGGGGTCTCTTGAAACAGATAATTAGACAGTTTGATTCAAACAGTTCATTGAGAAAGAAAGGGGTCTCTGGAACTATTCGCAACTGTTGTTTTGAAGCCGAGAATCAGCTACAGAATTTGCTTTTGGTATCTGAGTTTCTCTGGCCTGCATTACTTCTTCCGGTAGCCGGCAACAAGATCTACAGTGAGGAGGACAGAAAAAAAATGCCACTTGAACTTGGGACTGCACTATCGATCGAACGTGAACCTGTTAATGATCCAGAAATTCGCACTCAAGTATTGGAAGCCATATACTTGATCTTATTGCAGGAGGCAGGTCGAAGAGCCTTTTGGTCTGTAAATGGGCCTAGAATAGTACAAGTTGGTTATGAAGACGAGGAAGATCCAAAAGTGATGGGAGCGTATGAGCAACTAGGATCCTTGGTAAATAGTAGATATTCTATTTTATCAACAGAAAAATTATTGAACCTCCCCCACAATCCCCATCTTTATGTTGCTTTTCTAATTAATCATCTGCGTGTTACTGACTCTATTTTTTTGATCCAGTTGGTTAACGGCAGCGGTATGGAGGAACCATCCACTGAGACGACAGAGTAG

Protein sequence

>Msa1288420

MATELEELVSFLSSPSPQITKAAVDIVRGLTGSEEGIHSLANQSKNLISALSLSEAAAEALVNLSQNSNLAEEMVQTRLVETTMDVLYKPECCVTRLLVMLLVNLTQLDAGTDSLLQIDDEKVRGLYVMKLVRSFCRTTHEKNDDSFEHVGSMLVNITKQRAGRELLLDPKRGLLKQIIRQFDSNSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYSEEDRKKMPLELGTALSIEREPVNDPEIRTQVLEAIYLILLQEAGRRAFWSVNGPRIVQVGYEDEEDPKVMGAYEQLGSLVNSRYSILSTEKLLNLPHNPHLYVAFLINHLRVTDSIFLIQLVNGSGMEEPSTETTE*