AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0157100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0157100 MtrunA17_Chr1g0168821 92.308 78 5 1 1 77 1 78 5.42e-47 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 13 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTTCGTAAATCGAAT+TGG 0.344067 1_4:+24047212 None:intergenic
ATGAGAACAATGGATTTGTT+CGG 0.449405 1_4:-24047172 Msa0157100:CDS
GGATTTGTTCGGAGAGGAGA+TGG 0.472087 1_4:-24047161 Msa0157100:CDS
TCAGATAACAACCATGGCTA+TGG 0.492608 1_4:-24047134 Msa0157100:CDS
ATGACTGTGCATGCAGCTAT+AGG 0.508789 1_4:+24045435 None:intergenic
AAAGTAGTCTTGTTTCAAGA+AGG 0.519881 1_4:-24045463 Msa0157100:intron
AACAATGGATTTGTTCGGAG+AGG 0.601463 1_4:-24047167 Msa0157100:CDS
AATTTCGATATCTTATCCGA+AGG 0.608255 1_4:-24047094 Msa0157100:intron
TTTGTTCGGAGAGGAGATGG+AGG 0.616272 1_4:-24047158 Msa0157100:CDS
GTCATCAACATCCATAGCCA+TGG 0.620045 1_4:+24047123 None:intergenic
TAGTCGAAGAATGAGAACAA+TGG 0.638863 1_4:-24047182 Msa0157100:CDS
AGTACCAATTCGATTTACGA+AGG 0.639718 1_4:-24047216 Msa0157100:CDS
GGAGGATCAGATAACAACCA+TGG 0.690661 1_4:-24047140 Msa0157100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATATATATTTGTATGAAA+AGG - chr1_4:24047089-24047108 Msa0157100:intron 15.0%
!! TCATATATATTTGTATGAAA+AGG - chr1_4:24047089-24047108 Msa0157100:intron 15.0%
!!! TTTGTTAGGTTATTTTCATA+TGG - chr1_4:24045645-24045664 Msa0157100:intron 20.0%
!!! TTAATATGATGATGAATCTT+TGG - chr1_4:24045725-24045744 Msa0157100:intron 20.0%
!!! TATTAAGTTGTGTTTGATTT+TGG - chr1_4:24045855-24045874 Msa0157100:intron 20.0%
!!! TTAGATTTGTTTTTGATTTG+AGG - chr1_4:24045922-24045941 Msa0157100:intron 20.0%
!! TTCAGATTTGAACATATTAT+TGG - chr1_4:24046816-24046835 Msa0157100:intron 20.0%
!!! TTGGTATTATTGATAGTTTA+CGG - chr1_4:24046835-24046854 Msa0157100:intron 20.0%
!!! TTTTAAGAAGTGATAAATTG+TGG - chr1_4:24046974-24046993 Msa0157100:intron 20.0%
!!! CTGTAAATAGATTTTTAATG+AGG - chr1_4:24047122-24047141 Msa0157100:CDS 20.0%
!!! TTTGTTAGGTTATTTTCATA+TGG - chr1_4:24045645-24045664 Msa0157100:intron 20.0%
!!! TTAATATGATGATGAATCTT+TGG - chr1_4:24045725-24045744 Msa0157100:intron 20.0%
!!! TATTAAGTTGTGTTTGATTT+TGG - chr1_4:24045855-24045874 Msa0157100:intron 20.0%
!!! TTAGATTTGTTTTTGATTTG+AGG - chr1_4:24045922-24045941 Msa0157100:intron 20.0%
!! TTCAGATTTGAACATATTAT+TGG - chr1_4:24046816-24046835 Msa0157100:intron 20.0%
!!! TTGGTATTATTGATAGTTTA+CGG - chr1_4:24046835-24046854 Msa0157100:intron 20.0%
!!! TTTTAAGAAGTGATAAATTG+TGG - chr1_4:24046974-24046993 Msa0157100:intron 20.0%
!!! CTGTAAATAGATTTTTAATG+AGG - chr1_4:24047122-24047141 Msa0157100:CDS 20.0%
!! ATGAATCTTTGGTGATTAAT+CGG - chr1_4:24045736-24045755 Msa0157100:intron 25.0%
!!! ATCGGATTAATTTCTTGTTT+TGG - chr1_4:24045754-24045773 Msa0157100:intron 25.0%
!!! TCGGATTAATTTCTTGTTTT+GGG - chr1_4:24045755-24045774 Msa0157100:intron 25.0%
!!! TTTGATTTTGGTGATTTCTT+AGG - chr1_4:24045867-24045886 Msa0157100:intron 25.0%
! ATACTCTTGAATGAATTTAC+AGG - chr1_4:24045997-24046016 Msa0157100:intron 25.0%
! GCACTTAAAAGTAAACAAAT+TGG - chr1_4:24046077-24046096 Msa0157100:intron 25.0%
!! AAACAAATTGGTGTTTGAAT+AGG - chr1_4:24046089-24046108 Msa0157100:intron 25.0%
! TTATGCTAAATAATGTATCG+CGG - chr1_4:24046228-24046247 Msa0157100:intron 25.0%
! TAGAAAAGATTGTTGAAACT+TGG - chr1_4:24046428-24046447 Msa0157100:intron 25.0%
!! ATTTCTCACATAGTTTTTCT+AGG + chr1_4:24046545-24046564 None:intergenic 25.0%
! TAATGTGTTTCATGATTGAT+TGG - chr1_4:24046926-24046945 Msa0157100:intron 25.0%
!!! TGATTGGTTCATTTTTCAAA+AGG - chr1_4:24046942-24046961 Msa0157100:intron 25.0%
! TTAGTCCTTAAAGATGATTA+TGG + chr1_4:24047050-24047069 None:intergenic 25.0%
!! ATAGATTTTTAATGAGGTAC+AGG - chr1_4:24047128-24047147 Msa0157100:CDS 25.0%
!! ATGAATCTTTGGTGATTAAT+CGG - chr1_4:24045736-24045755 Msa0157100:intron 25.0%
!!! ATCGGATTAATTTCTTGTTT+TGG - chr1_4:24045754-24045773 Msa0157100:intron 25.0%
!!! TCGGATTAATTTCTTGTTTT+GGG - chr1_4:24045755-24045774 Msa0157100:intron 25.0%
!!! TTTGATTTTGGTGATTTCTT+AGG - chr1_4:24045867-24045886 Msa0157100:intron 25.0%
! ATACTCTTGAATGAATTTAC+AGG - chr1_4:24045997-24046016 Msa0157100:intron 25.0%
! GCACTTAAAAGTAAACAAAT+TGG - chr1_4:24046077-24046096 Msa0157100:intron 25.0%
!! AAACAAATTGGTGTTTGAAT+AGG - chr1_4:24046089-24046108 Msa0157100:intron 25.0%
! TTATGCTAAATAATGTATCG+CGG - chr1_4:24046228-24046247 Msa0157100:intron 25.0%
! TAGAAAAGATTGTTGAAACT+TGG - chr1_4:24046428-24046447 Msa0157100:intron 25.0%
!! ATTTCTCACATAGTTTTTCT+AGG + chr1_4:24046545-24046564 None:intergenic 25.0%
! TAATGTGTTTCATGATTGAT+TGG - chr1_4:24046926-24046945 Msa0157100:intron 25.0%
!!! TGATTGGTTCATTTTTCAAA+AGG - chr1_4:24046942-24046961 Msa0157100:intron 25.0%
! TTAGTCCTTAAAGATGATTA+TGG + chr1_4:24047050-24047069 None:intergenic 25.0%
!! ATAGATTTTTAATGAGGTAC+AGG - chr1_4:24047128-24047147 Msa0157100:CDS 25.0%
! ATGAGAACAATGGATTTGTT+CGG - chr1_4:24045459-24045478 Msa0157100:CDS 30.0%
AATTTCGATATCTTATCCGA+AGG - chr1_4:24045537-24045556 Msa0157100:intron 30.0%
!! CTGATATCAACTAGTTTGTT+AGG - chr1_4:24045631-24045650 Msa0157100:intron 30.0%
!!! GATGTAGTACTTTGCTTTTT+TGG - chr1_4:24045693-24045712 Msa0157100:intron 30.0%
AAGGGAATAATTCAAGAACT+CGG + chr1_4:24046040-24046059 None:intergenic 30.0%
ATAGGTAAACATGCTTAGAT+TGG - chr1_4:24046107-24046126 Msa0157100:intron 30.0%
TAGGTAAACATGCTTAGATT+GGG - chr1_4:24046108-24046127 Msa0157100:intron 30.0%
! TTGCCACAATCATACATTTT+AGG - chr1_4:24046334-24046353 Msa0157100:intron 30.0%
CAACCTAAAATGTATGATTG+TGG + chr1_4:24046340-24046359 None:intergenic 30.0%
! TACCTGTAGATTTTGTAGTA+AGG - chr1_4:24046487-24046506 Msa0157100:intron 30.0%
GAGAGTAGTCAATTTACTAA+TGG - chr1_4:24046509-24046528 Msa0157100:intron 30.0%
AGTCAATTTACTAATGGTAG+AGG - chr1_4:24046515-24046534 Msa0157100:intron 30.0%
CTAGTTAGCAACATAACAAT+TGG - chr1_4:24046870-24046889 Msa0157100:intron 30.0%
!! GATTGATCCCATTTTTAGAA+AGG + chr1_4:24047005-24047024 None:intergenic 30.0%
!! AAAGTAGTCTTGTTTCAAGA+AGG - chr1_4:24047168-24047187 Msa0157100:CDS 30.0%
! ATGAGAACAATGGATTTGTT+CGG - chr1_4:24045459-24045478 Msa0157100:CDS 30.0%
AATTTCGATATCTTATCCGA+AGG - chr1_4:24045537-24045556 Msa0157100:intron 30.0%
!! CTGATATCAACTAGTTTGTT+AGG - chr1_4:24045631-24045650 Msa0157100:intron 30.0%
!!! GATGTAGTACTTTGCTTTTT+TGG - chr1_4:24045693-24045712 Msa0157100:intron 30.0%
AAGGGAATAATTCAAGAACT+CGG + chr1_4:24046040-24046059 None:intergenic 30.0%
ATAGGTAAACATGCTTAGAT+TGG - chr1_4:24046107-24046126 Msa0157100:intron 30.0%
TAGGTAAACATGCTTAGATT+GGG - chr1_4:24046108-24046127 Msa0157100:intron 30.0%
! TTGCCACAATCATACATTTT+AGG - chr1_4:24046334-24046353 Msa0157100:intron 30.0%
CAACCTAAAATGTATGATTG+TGG + chr1_4:24046340-24046359 None:intergenic 30.0%
! TACCTGTAGATTTTGTAGTA+AGG - chr1_4:24046487-24046506 Msa0157100:intron 30.0%
GAGAGTAGTCAATTTACTAA+TGG - chr1_4:24046509-24046528 Msa0157100:intron 30.0%
AGTCAATTTACTAATGGTAG+AGG - chr1_4:24046515-24046534 Msa0157100:intron 30.0%
CTAGTTAGCAACATAACAAT+TGG - chr1_4:24046870-24046889 Msa0157100:intron 30.0%
!! GATTGATCCCATTTTTAGAA+AGG + chr1_4:24047005-24047024 None:intergenic 30.0%
!! AAAGTAGTCTTGTTTCAAGA+AGG - chr1_4:24047168-24047187 Msa0157100:CDS 30.0%
AGTACCAATTCGATTTACGA+AGG - chr1_4:24045415-24045434 Msa0157100:CDS 35.0%
TAGTCGAAGAATGAGAACAA+TGG - chr1_4:24045449-24045468 Msa0157100:CDS 35.0%
ATCATCGAAATCATCTTGGA+AGG + chr1_4:24045610-24045629 None:intergenic 35.0%
AGGGAATAATTCAAGAACTC+GGG + chr1_4:24046039-24046058 None:intergenic 35.0%
! CGACTGACAACACTTTTAAA+GGG + chr1_4:24046058-24046077 None:intergenic 35.0%
! CGACTGACAACACTTTTAAA+GGG + chr1_4:24046058-24046077 None:intergenic 35.0%
GCTATAGCATCAAAACTAAG+CGG + chr1_4:24046180-24046199 None:intergenic 35.0%
AAGACAGTGTTATCAACTAG+CGG + chr1_4:24046291-24046310 None:intergenic 35.0%
TAACACTGTCTTCTACTAGT+TGG - chr1_4:24046299-24046318 Msa0157100:intron 35.0%
TTGTTTGATCAATGTTGCGT+TGG - chr1_4:24046357-24046376 Msa0157100:intron 35.0%
AGATTGTTGAAACTTGGCTT+AGG - chr1_4:24046434-24046453 Msa0157100:intron 35.0%
CTCCTTACTACAAAATCTAC+AGG + chr1_4:24046492-24046511 None:intergenic 35.0%
ATGTTTCCAACCCAATTAGT+GGG - chr1_4:24046633-24046652 Msa0157100:intron 35.0%
! CAAGCTTTATCCCACTAATT+GGG + chr1_4:24046646-24046665 None:intergenic 35.0%
! GTAAGCTGTTTCATCTTGAT+TGG - chr1_4:24046740-24046759 Msa0157100:intron 35.0%
!! ATAACTGATTTTCCAACTGC+AGG - chr1_4:24046790-24046809 Msa0157100:intron 35.0%
AAATCTGAATTTCCTGCAGT+TGG + chr1_4:24046805-24046824 None:intergenic 35.0%
CAATTGGAATACTAGCACAT+AGG - chr1_4:24046886-24046905 Msa0157100:intron 35.0%
! TGGTGATGCCTTTCTAAAAA+TGG - chr1_4:24046994-24047013 Msa0157100:intron 35.0%
! GGTGATGCCTTTCTAAAAAT+GGG - chr1_4:24046995-24047014 Msa0157100:intron 35.0%
ATGGGATCAATCAATAAGAC+TGG - chr1_4:24047013-24047032 Msa0157100:intron 35.0%
! GATTTTTAATGAGGTACAGG+TGG - chr1_4:24047131-24047150 Msa0157100:CDS 35.0%
AGTACCAATTCGATTTACGA+AGG - chr1_4:24045415-24045434 Msa0157100:CDS 35.0%
TAGTCGAAGAATGAGAACAA+TGG - chr1_4:24045449-24045468 Msa0157100:CDS 35.0%
ATCATCGAAATCATCTTGGA+AGG + chr1_4:24045610-24045629 None:intergenic 35.0%
AGGGAATAATTCAAGAACTC+GGG + chr1_4:24046039-24046058 None:intergenic 35.0%
! CGACTGACAACACTTTTAAA+GGG + chr1_4:24046058-24046077 None:intergenic 35.0%
! CGACTGACAACACTTTTAAA+GGG + chr1_4:24046058-24046077 None:intergenic 35.0%
GCTATAGCATCAAAACTAAG+CGG + chr1_4:24046180-24046199 None:intergenic 35.0%
AAGACAGTGTTATCAACTAG+CGG + chr1_4:24046291-24046310 None:intergenic 35.0%
TAACACTGTCTTCTACTAGT+TGG - chr1_4:24046299-24046318 Msa0157100:intron 35.0%
TTGTTTGATCAATGTTGCGT+TGG - chr1_4:24046357-24046376 Msa0157100:intron 35.0%
AGATTGTTGAAACTTGGCTT+AGG - chr1_4:24046434-24046453 Msa0157100:intron 35.0%
CTCCTTACTACAAAATCTAC+AGG + chr1_4:24046492-24046511 None:intergenic 35.0%
ATGTTTCCAACCCAATTAGT+GGG - chr1_4:24046633-24046652 Msa0157100:intron 35.0%
! CAAGCTTTATCCCACTAATT+GGG + chr1_4:24046646-24046665 None:intergenic 35.0%
! GTAAGCTGTTTCATCTTGAT+TGG - chr1_4:24046740-24046759 Msa0157100:intron 35.0%
!! ATAACTGATTTTCCAACTGC+AGG - chr1_4:24046790-24046809 Msa0157100:intron 35.0%
AAATCTGAATTTCCTGCAGT+TGG + chr1_4:24046805-24046824 None:intergenic 35.0%
CAATTGGAATACTAGCACAT+AGG - chr1_4:24046886-24046905 Msa0157100:intron 35.0%
! TGGTGATGCCTTTCTAAAAA+TGG - chr1_4:24046994-24047013 Msa0157100:intron 35.0%
! GGTGATGCCTTTCTAAAAAT+GGG - chr1_4:24046995-24047014 Msa0157100:intron 35.0%
ATGGGATCAATCAATAAGAC+TGG - chr1_4:24047013-24047032 Msa0157100:intron 35.0%
! GATTTTTAATGAGGTACAGG+TGG - chr1_4:24047131-24047150 Msa0157100:CDS 35.0%
CTCTCCTTCGTAAATCGAAT+TGG + chr1_4:24045422-24045441 None:intergenic 40.0%
! AACAATGGATTTGTTCGGAG+AGG - chr1_4:24045464-24045483 Msa0157100:intron 40.0%
TCAGATAACAACCATGGCTA+TGG - chr1_4:24045497-24045516 Msa0157100:intron 40.0%
ATCATTGACGGCAATACCTT+CGG + chr1_4:24045556-24045575 None:intergenic 40.0%
! AGCGACTTTGCTATCATTGA+CGG + chr1_4:24045568-24045587 None:intergenic 40.0%
CAGCATCATCGAAATCATCT+TGG + chr1_4:24045614-24045633 None:intergenic 40.0%
!! TGAGGCACTGTTAATCTGTT+AGG - chr1_4:24045940-24045959 Msa0157100:intron 40.0%
GCACTGTTAATCTGTTAGGA+AGG - chr1_4:24045944-24045963 Msa0157100:intron 40.0%
! GCGACTGACAACACTTTTAA+AGG + chr1_4:24046059-24046078 None:intergenic 40.0%
! GCGACTGACAACACTTTTAA+AGG + chr1_4:24046059-24046078 None:intergenic 40.0%
TTGTCGAGTTCTACTATGAC+AGG - chr1_4:24046264-24046283 Msa0157100:intron 40.0%
TGTCGAGTTCTACTATGACA+GGG - chr1_4:24046265-24046284 Msa0157100:intron 40.0%
TTGTTGAAACTTGGCTTAGG+TGG - chr1_4:24046437-24046456 Msa0157100:intron 40.0%
!! CACTAATTGGGTTGGAAACA+TGG + chr1_4:24046634-24046653 None:intergenic 40.0%
CATGTTTCCAACCCAATTAG+TGG - chr1_4:24046632-24046651 Msa0157100:intron 40.0%
CTTTATCCCACTAATTGGGT+TGG + chr1_4:24046642-24046661 None:intergenic 40.0%
! CCAAGCTTTATCCCACTAAT+TGG + chr1_4:24046647-24046666 None:intergenic 40.0%
CCAATTAGTGGGATAAAGCT+TGG - chr1_4:24046644-24046663 Msa0157100:intron 40.0%
CAGCGCCATAATCATCTTTA+AGG - chr1_4:24047042-24047061 Msa0157100:intron 40.0%
!!! AGGTACAGGTGGTTGTTTTT+TGG - chr1_4:24047142-24047161 Msa0157100:CDS 40.0%
!!! TACAGGTGGTTGTTTTTTGG+TGG - chr1_4:24047145-24047164 Msa0157100:CDS 40.0%
CTCTCCTTCGTAAATCGAAT+TGG + chr1_4:24045422-24045441 None:intergenic 40.0%
! AACAATGGATTTGTTCGGAG+AGG - chr1_4:24045464-24045483 Msa0157100:intron 40.0%
TCAGATAACAACCATGGCTA+TGG - chr1_4:24045497-24045516 Msa0157100:intron 40.0%
ATCATTGACGGCAATACCTT+CGG + chr1_4:24045556-24045575 None:intergenic 40.0%
! AGCGACTTTGCTATCATTGA+CGG + chr1_4:24045568-24045587 None:intergenic 40.0%
CAGCATCATCGAAATCATCT+TGG + chr1_4:24045614-24045633 None:intergenic 40.0%
!! TGAGGCACTGTTAATCTGTT+AGG - chr1_4:24045940-24045959 Msa0157100:intron 40.0%
GCACTGTTAATCTGTTAGGA+AGG - chr1_4:24045944-24045963 Msa0157100:intron 40.0%
! GCGACTGACAACACTTTTAA+AGG + chr1_4:24046059-24046078 None:intergenic 40.0%
! GCGACTGACAACACTTTTAA+AGG + chr1_4:24046059-24046078 None:intergenic 40.0%
TTGTCGAGTTCTACTATGAC+AGG - chr1_4:24046264-24046283 Msa0157100:intron 40.0%
TGTCGAGTTCTACTATGACA+GGG - chr1_4:24046265-24046284 Msa0157100:intron 40.0%
TTGTTGAAACTTGGCTTAGG+TGG - chr1_4:24046437-24046456 Msa0157100:intron 40.0%
!! CACTAATTGGGTTGGAAACA+TGG + chr1_4:24046634-24046653 None:intergenic 40.0%
CATGTTTCCAACCCAATTAG+TGG - chr1_4:24046632-24046651 Msa0157100:intron 40.0%
CTTTATCCCACTAATTGGGT+TGG + chr1_4:24046642-24046661 None:intergenic 40.0%
! CCAAGCTTTATCCCACTAAT+TGG + chr1_4:24046647-24046666 None:intergenic 40.0%
CCAATTAGTGGGATAAAGCT+TGG - chr1_4:24046644-24046663 Msa0157100:intron 40.0%
CAGCGCCATAATCATCTTTA+AGG - chr1_4:24047042-24047061 Msa0157100:intron 40.0%
!!! AGGTACAGGTGGTTGTTTTT+TGG - chr1_4:24047142-24047161 Msa0157100:CDS 40.0%
!!! TACAGGTGGTTGTTTTTTGG+TGG - chr1_4:24047145-24047164 Msa0157100:CDS 40.0%
GGAGGATCAGATAACAACCA+TGG - chr1_4:24045491-24045510 Msa0157100:intron 45.0%
GTCATCAACATCCATAGCCA+TGG + chr1_4:24045511-24045530 None:intergenic 45.0%
TTGATGCTATAGCGCAGTGA+TGG - chr1_4:24046187-24046206 Msa0157100:intron 45.0%
GTGCTAGGACTACACATGAT+AGG - chr1_4:24046384-24046403 Msa0157100:intron 45.0%
GATAGGACAACATTAGCGAG+AGG - chr1_4:24046401-24046420 Msa0157100:intron 45.0%
ACAGTTGAATTGCGAGTCGT+TGG + chr1_4:24046688-24046707 None:intergenic 45.0%
ATGACTGTGCATGCAGCTAT+AGG + chr1_4:24047199-24047218 None:intergenic 45.0%
GGAGGATCAGATAACAACCA+TGG - chr1_4:24045491-24045510 Msa0157100:intron 45.0%
GTCATCAACATCCATAGCCA+TGG + chr1_4:24045511-24045530 None:intergenic 45.0%
TTGATGCTATAGCGCAGTGA+TGG - chr1_4:24046187-24046206 Msa0157100:intron 45.0%
GTGCTAGGACTACACATGAT+AGG - chr1_4:24046384-24046403 Msa0157100:intron 45.0%
GATAGGACAACATTAGCGAG+AGG - chr1_4:24046401-24046420 Msa0157100:intron 45.0%
ACAGTTGAATTGCGAGTCGT+TGG + chr1_4:24046688-24046707 None:intergenic 45.0%
ATGACTGTGCATGCAGCTAT+AGG + chr1_4:24047199-24047218 None:intergenic 45.0%
! GGATTTGTTCGGAGAGGAGA+TGG - chr1_4:24045470-24045489 Msa0157100:intron 50.0%
TTTGTTCGGAGAGGAGATGG+AGG - chr1_4:24045473-24045492 Msa0157100:intron 50.0%
TGTTGCGTTGGATGTGTGCT+AGG - chr1_4:24046369-24046388 Msa0157100:intron 50.0%
! GGTGGTTTGTGCATGTAGAG+AGG - chr1_4:24046455-24046474 Msa0157100:intron 50.0%
! GGATTTGTTCGGAGAGGAGA+TGG - chr1_4:24045470-24045489 Msa0157100:intron 50.0%
TTTGTTCGGAGAGGAGATGG+AGG - chr1_4:24045473-24045492 Msa0157100:intron 50.0%
TGTTGCGTTGGATGTGTGCT+AGG - chr1_4:24046369-24046388 Msa0157100:intron 50.0%
! GGTGGTTTGTGCATGTAGAG+AGG - chr1_4:24046455-24046474 Msa0157100:intron 50.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 24045402 24047251 24045402 ID=Msa0157100;Name=Msa0157100
chr1_4 mRNA 24045402 24047251 24045402 ID=Msa0157100-mRNA-1;Parent=Msa0157100;Name=Msa0157100-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|0|0|2|0|77
chr1_4 exon 24047095 24047251 24047095 ID=Msa0157100-mRNA-1:exon:8363;Parent=Msa0157100-mRNA-1
chr1_4 exon 24045402 24045478 24045402 ID=Msa0157100-mRNA-1:exon:8362;Parent=Msa0157100-mRNA-1
chr1_4 CDS 24047095 24047251 24047095 ID=Msa0157100-mRNA-1:cds;Parent=Msa0157100-mRNA-1
chr1_4 CDS 24045402 24045478 24045402 ID=Msa0157100-mRNA-1:cds;Parent=Msa0157100-mRNA-1
Gene Sequence

>Msa0157100

ATGAACGACGTAAAGTACCAATTCGATTTACGAAGGAGAGAAAAAGATAGTCGAAGAATGAGAACAATGGATTTGTTCGGAGAGGAGATGGAGGATCAGATAACAACCATGGCTATGGATGTTGATGACGTCGACAATTTCGATATCTTATCCGAAGTCTTGTTTCAAGAAGGAAGCACCTATAGCTGCATGCACAGTCATACATATATACTATTGATGAATGCTTTGCACTAA

Protein sequence

>Msa0157100

MNDVKYQFDLRRREKDSRRMRTMDLFGEEMEDQITTMAMDVDDVDNFDILSEVLFQEGSTYSCMHSHTYILLMNALH*