Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184000 | sp|Q869R1|CTLHB_DICDI | 28.571 | 252 | 153 | 7 | 86 | 324 | 199 | 436 | 8.52e-22 | 99.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184000 | A0A072W1V3 | 84.438 | 347 | 7 | 5 | 18 | 327 | 18 | 354 | 2.57e-176 | 501 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa0184000 | 0.809312 | 2.013481e-50 | -8.615850e-47 |
| Msa0035020 | Msa0184000 | 0.873536 | 1.363188e-67 | -8.615850e-47 |
| Msa0061500 | Msa0184000 | 0.816388 | 5.675042e-52 | -8.615850e-47 |
| Msa0090150 | Msa0184000 | 0.804540 | 2.057083e-49 | -8.615850e-47 |
| Msa0092410 | Msa0184000 | 0.804057 | 2.593054e-49 | -8.615850e-47 |
| Msa0125650 | Msa0184000 | 0.805256 | 1.457361e-49 | -8.615850e-47 |
| Msa0137800 | Msa0184000 | 0.835690 | 1.449206e-56 | -8.615850e-47 |
| Msa0152560 | Msa0184000 | 0.823573 | 1.287997e-53 | -8.615850e-47 |
| Msa0184000 | Msa0187830 | 0.804063 | 2.585236e-49 | -8.615850e-47 |
| Msa0184000 | Msa0189610 | 0.826311 | 2.908276e-54 | -8.615850e-47 |
| Msa0184000 | Msa0227340 | 0.828297 | 9.720938e-55 | -8.615850e-47 |
| Msa0184000 | Msa0264830 | 0.837525 | 4.939035e-57 | -8.615850e-47 |
| Msa0184000 | Msa0271550 | 0.822244 | 2.627435e-53 | -8.615850e-47 |
| Msa0184000 | Msa0302870 | 0.827601 | 1.429853e-54 | -8.615850e-47 |
| Msa0184000 | Msa0317970 | 0.808454 | 3.072270e-50 | -8.615850e-47 |
| Msa0184000 | Msa0319290 | 0.831053 | 2.076025e-55 | -8.615850e-47 |
| Msa0184000 | Msa0340340 | 0.841497 | 4.584939e-58 | -8.615850e-47 |
| Msa0184000 | Msa0371950 | 0.802614 | 5.159580e-49 | -8.615850e-47 |
| Msa0184000 | Msa0432160 | 0.809123 | 2.210856e-50 | -8.615850e-47 |
| Msa0184000 | Msa0476680 | 0.822250 | 2.618598e-53 | -8.615850e-47 |
| Msa0184000 | Msa0484800 | 0.806462 | 8.130435e-50 | -8.615850e-47 |
| Msa0184000 | Msa0521010 | 0.825711 | 4.039073e-54 | -8.615850e-47 |
| Msa0184000 | Msa0712260 | 0.811937 | 5.451552e-51 | -8.615850e-47 |
| Msa0184000 | Msa0713510 | 0.816013 | 6.881532e-52 | -8.615850e-47 |
| Msa0184000 | Msa0828240 | 0.825871 | 3.700635e-54 | -8.615850e-47 |
| Msa0184000 | Msa0880810 | 0.803989 | 2.679313e-49 | -8.615850e-47 |
| Msa0184000 | Msa0899970 | 0.821050 | 4.960668e-53 | -8.615850e-47 |
| Msa0184000 | Msa0965080 | 0.813944 | 1.980698e-51 | -8.615850e-47 |
| Msa0184000 | Msa0965290 | 0.815772 | 7.787926e-52 | -8.615850e-47 |
| Msa0184000 | Msa0999680 | 0.819565 | 1.086295e-52 | -8.615850e-47 |
| Msa0184000 | Msa1214170 | 0.801479 | 8.829844e-49 | -8.615850e-47 |
| Msa0184000 | Msa1218580 | 0.804815 | 1.802553e-49 | -8.615850e-47 |
| Msa0184000 | Msa1225100 | 0.810614 | 1.055919e-50 | -8.615850e-47 |
| Msa0184000 | Msa1329870 | 0.808194 | 3.491212e-50 | -8.615850e-47 |
| Msa0184000 | Msa1338400 | 0.807114 | 5.920775e-50 | -8.615850e-47 |
| Msa0184000 | Msa1355890 | 0.800847 | 1.189165e-48 | -8.615850e-47 |
| Msa0184000 | Msa1360020 | 0.802732 | 4.879958e-49 | -8.615850e-47 |
| Msa0184000 | Msa1405220 | 0.802463 | 5.545017e-49 | -8.615850e-47 |
| Msa0184000 | Msa1424630 | 0.813486 | 2.498086e-51 | -8.615850e-47 |
| Msa0184000 | Msa1436600 | 0.806703 | 7.231962e-50 | -8.615850e-47 |
| Msa0184000 | Msa1462360 | 0.804738 | 1.870260e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184000 | MtrunA17_Chr1g0210161 | 84.012 | 344 | 8 | 5 | 18 | 324 | 18 | 351 | 4.99e-174 | 492 |
| Msa0184000 | MtrunA17_Chr5g0422761 | 67.335 | 349 | 67 | 4 | 13 | 324 | 7 | 345 | 1.70e-146 | 422 |
| Msa0184000 | MtrunA17_Chr3g0090051 | 26.699 | 206 | 127 | 4 | 119 | 324 | 262 | 443 | 9.08e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184000 | AT1G25500.2 | 61.157 | 363 | 93 | 6 | 1 | 325 | 1 | 353 | 1.93e-135 | 394 |
| Msa0184000 | AT1G25500.3 | 70.035 | 287 | 66 | 4 | 48 | 324 | 18 | 294 | 2.02e-129 | 376 |
| Msa0184000 | AT1G25500.1 | 71.730 | 237 | 47 | 5 | 99 | 325 | 1 | 227 | 2.41e-102 | 303 |
| Msa0184000 | AT5G13760.1 | 27.670 | 206 | 125 | 4 | 119 | 324 | 252 | 433 | 4.62e-13 | 70.1 |
Find 112 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTCTGTATGTTCTTATT+TGG | 0.146201 | 1_4:-73115114 | Msa0184000:CDS |
| CCGGGTTAACCGAAACTTAT+TGG | 0.156204 | 1_4:-73116252 | Msa0184000:CDS |
| TATTAATTAGTATAATAATT+AGG | 0.160749 | 1_4:+73117137 | None:intergenic |
| GTGTTTCTTGTTCTTCTTCA+TGG | 0.194172 | 1_4:-73114944 | Msa0184000:CDS |
| GGTGGAATTGGGACTGTTCT+TGG | 0.249819 | 1_4:-73116211 | Msa0184000:CDS |
| ATTAATTAGTATAATAATTA+GGG | 0.280736 | 1_4:+73117138 | None:intergenic |
| TATGCGGCTGCTGGTGGAAT+TGG | 0.288454 | 1_4:-73116223 | Msa0184000:CDS |
| CATTATTTACTGCGGCTATC+AGG | 0.296862 | 1_4:-73114829 | Msa0184000:CDS |
| TGACTTCGCTTCCGCCATTC+AGG | 0.310826 | 1_4:-73116892 | Msa0184000:intron |
| TGCAGAACCAGCATCGTAAA+TGG | 0.317444 | 1_4:+73115316 | None:intergenic |
| GTTCTTATTTGGACTGGTTA+TGG | 0.326835 | 1_4:-73115103 | Msa0184000:CDS |
| TGAATGGAATGGAATGAATA+TGG | 0.329451 | 1_4:+73117006 | None:intergenic |
| ATGGACTTGGTTGTTGTTGT+TGG | 0.342035 | 1_4:-73116188 | Msa0184000:CDS |
| GGTTAACCCGGCATGATTCC+CGG | 0.344297 | 1_4:+73116264 | None:intergenic |
| TGGATGGCCTTATGGTCATT+TGG | 0.345668 | 1_4:-73115217 | Msa0184000:CDS |
| AAGTACACTCCTGGTCTTAC+CGG | 0.351688 | 1_4:-73116283 | Msa0184000:CDS |
| TCACATCCTCACCACTTATC+TGG | 0.355225 | 1_4:-73116131 | Msa0184000:CDS |
| TATGCTTTAACAACATCTTT+TGG | 0.365686 | 1_4:-73114869 | Msa0184000:CDS |
| TGATTTCCTCTTTCATCTTG+TGG | 0.389585 | 1_4:-73114638 | Msa0184000:CDS |
| TGTTTCTCCATTCCCAATGA+TGG | 0.391255 | 1_4:-73116943 | Msa0184000:exon |
| CGCCGCCACTTCTCCTACTC+CGG | 0.391425 | 1_4:+73116461 | None:intergenic |
| TGGCCGCTTTATGCGGCTGC+TGG | 0.391745 | 1_4:-73116232 | Msa0184000:CDS |
| ATTAGAGAGGAGAAGGTCAA+TGG | 0.392843 | 1_4:+73117078 | None:intergenic |
| CTTTCATCATTTGAGTAGCC+TGG | 0.393996 | 1_4:+73116161 | None:intergenic |
| ATGCGGCTGCTGGTGGAATT+GGG | 0.395736 | 1_4:-73116222 | Msa0184000:CDS |
| ATACTGCAAAGATTTCATTA+AGG | 0.403891 | 1_4:+73114889 | None:intergenic |
| TGGACTTGGTTGTTGTTGTT+GGG | 0.404889 | 1_4:-73116187 | Msa0184000:CDS |
| CTGTATGTTCTTATTTGGAC+TGG | 0.411740 | 1_4:-73115109 | Msa0184000:CDS |
| GTTGTTGTTGTTGGGTTCCC+AGG | 0.413364 | 1_4:-73116179 | Msa0184000:CDS |
| TAACAAATATGCCTATGTTC+AGG | 0.414206 | 1_4:-73114596 | Msa0184000:CDS |
| GGACTGTTCTTGGATGGACT+TGG | 0.421193 | 1_4:-73116201 | Msa0184000:CDS |
| GAATGGAATGAATATGGAAA+AGG | 0.441338 | 1_4:+73117012 | None:intergenic |
| CCGCTTTATGCGGCTGCTGG+TGG | 0.442048 | 1_4:-73116229 | Msa0184000:CDS |
| ACTGTGCATGTTATAGTGTC+TGG | 0.442564 | 1_4:-73114971 | Msa0184000:CDS |
| AAAGAGGGAGAATCCATCAT+TGG | 0.446656 | 1_4:+73116930 | None:intergenic |
| CAGACTTCCATTTACGATGC+TGG | 0.447339 | 1_4:-73115323 | Msa0184000:CDS |
| TGGCGGCGGCAGCAGTGAAA+TGG | 0.448408 | 1_4:-73116446 | Msa0184000:CDS |
| TCTTTCAGATACGTGGACTT+AGG | 0.451037 | 1_4:-73114699 | Msa0184000:intron |
| TTATGGTCATTTGGAGCAGC+AGG | 0.454748 | 1_4:-73115208 | Msa0184000:CDS |
| AAGGTCAATGGGTTATGTTA+TGG | 0.456254 | 1_4:+73117090 | None:intergenic |
| TTAGAGAGGAGAAGGTCAAT+GGG | 0.457053 | 1_4:+73117079 | None:intergenic |
| TTATGGTAGGGTGATGGTGG+TGG | 0.460666 | 1_4:+73117107 | None:intergenic |
| ATAAAGCGGCCAATAAGTTT+CGG | 0.462577 | 1_4:+73116243 | None:intergenic |
| GAATTGGGACTGTTCTTGGA+TGG | 0.462942 | 1_4:-73116207 | Msa0184000:CDS |
| GATTTCATTAAGGAGTTAGC+AGG | 0.469510 | 1_4:+73114899 | None:intergenic |
| GGTCTTACCGGGAATCATGC+CGG | 0.474937 | 1_4:-73116271 | Msa0184000:CDS |
| AATGGAATGAATATGGAAAA+GGG | 0.476148 | 1_4:+73117013 | None:intergenic |
| TGCTGCTCCAAATGACCATA+AGG | 0.477819 | 1_4:+73115210 | None:intergenic |
| AACTTATTGGCCGCTTTATG+CGG | 0.485649 | 1_4:-73116239 | Msa0184000:CDS |
| TCAATGGGTTATGTTATGGT+AGG | 0.487787 | 1_4:+73117094 | None:intergenic |
| AAGAGGGAGAATCCATCATT+GGG | 0.488839 | 1_4:+73116931 | None:intergenic |
| ATGTTATGGTAGGGTGATGG+TGG | 0.494396 | 1_4:+73117104 | None:intergenic |
| GCCGCCACTTCTCCTACTCC+GGG | 0.498850 | 1_4:+73116462 | None:intergenic |
| GTGGCTTCAAACTTGAGTGA+TGG | 0.511129 | 1_4:-73115181 | Msa0184000:CDS |
| TAGTAATAGAGAGGAATGAA+TGG | 0.511714 | 1_4:+73116990 | None:intergenic |
| ATAAAAGATTAGAGAGGAGA+AGG | 0.511987 | 1_4:+73117071 | None:intergenic |
| GGCTATCAGGACACTGCGAT+GGG | 0.512972 | 1_4:-73114816 | Msa0184000:CDS |
| CGTGGACTTAGGTCAAAGAT+TGG | 0.513470 | 1_4:-73114688 | Msa0184000:CDS |
| ATTTGGAGCAGCAGGTGTTG+TGG | 0.514073 | 1_4:-73115200 | Msa0184000:CDS |
| TGGCTTCAAACTTGAGTGAT+GGG | 0.514253 | 1_4:-73115180 | Msa0184000:CDS |
| CACGACACTCTCATGACCTC+GGG | 0.515499 | 1_4:+73115265 | None:intergenic |
| CAGCAGTGAAATGGTGGTGG+CGG | 0.515947 | 1_4:-73116437 | Msa0184000:CDS |
| GGGACGCTGGTGGCTTCTTG+TGG | 0.527891 | 1_4:-73115158 | Msa0184000:CDS |
| CCAATAAGTTTCGGTTAACC+CGG | 0.528188 | 1_4:+73116252 | None:intergenic |
| TTTCATCATTTGAGTAGCCT+GGG | 0.528321 | 1_4:+73116162 | None:intergenic |
| GGAGAATCCATCATTGGGAA+TGG | 0.529623 | 1_4:+73116936 | None:intergenic |
| GTCTTACCGGGAATCATGCC+GGG | 0.530497 | 1_4:-73116270 | Msa0184000:CDS |
| ATGATGATTCATAACCTGAA+TGG | 0.532760 | 1_4:+73116878 | None:intergenic |
| ATGTTATATCCGTCATAGAC+AGG | 0.534896 | 1_4:-73116025 | Msa0184000:intron |
| CGGCTATCAGGACACTGCGA+TGG | 0.536707 | 1_4:-73114817 | Msa0184000:CDS |
| CGGCAGCAGTGAAATGGTGG+TGG | 0.537136 | 1_4:-73116440 | Msa0184000:CDS |
| AGCGAAGTCAGAGGAAGAAG+AGG | 0.539083 | 1_4:+73116905 | None:intergenic |
| GGAAAAGGGGTGGAAAATGA+AGG | 0.541542 | 1_4:+73117027 | None:intergenic |
| GAGTCTCCACAAGATGAAAG+AGG | 0.544256 | 1_4:+73114632 | None:intergenic |
| GATAGAGTGCATCCCGGAGT+AGG | 0.552108 | 1_4:-73116474 | Msa0184000:intron |
| GAATAATAATAGTAATAGAG+AGG | 0.555871 | 1_4:+73116981 | None:intergenic |
| GTTATGTTATGGTAGGGTGA+TGG | 0.561053 | 1_4:+73117101 | None:intergenic |
| AGTACACTCCTGGTCTTACC+GGG | 0.564946 | 1_4:-73116282 | Msa0184000:CDS |
| ACTTATGACAGCCAGATAAG+TGG | 0.565648 | 1_4:+73116120 | None:intergenic |
| GCATGATTCCCGGTAAGACC+AGG | 0.566292 | 1_4:+73116274 | None:intergenic |
| CCACCAGCAGCCGCATAAAG+CGG | 0.568080 | 1_4:+73116229 | None:intergenic |
| AACATTGATAAGTACACTCC+TGG | 0.568478 | 1_4:-73116292 | Msa0184000:CDS |
| GGTGGCTTCTTGTGGTGAGG+TGG | 0.571942 | 1_4:-73115150 | Msa0184000:CDS |
| ATAGAGAGGAATGAATGGAA+TGG | 0.572498 | 1_4:+73116995 | None:intergenic |
| CAATGGGTTATGTTATGGTA+GGG | 0.573109 | 1_4:+73117095 | None:intergenic |
| CGGCGGCAGCAGTGAAATGG+TGG | 0.576587 | 1_4:-73116443 | Msa0184000:CDS |
| TCTTCTTCATGGTGGTAGAG+AGG | 0.577354 | 1_4:-73114933 | Msa0184000:CDS |
| ACAATCTGGTACCTGAACAT+AGG | 0.589676 | 1_4:+73114585 | None:intergenic |
| CTGTGCATGTTATAGTGTCT+GGG | 0.592316 | 1_4:-73114970 | Msa0184000:CDS |
| TTATGGCTCATTATTTACTG+CGG | 0.599332 | 1_4:-73114837 | Msa0184000:CDS |
| ACACGACACTCTCATGACCT+CGG | 0.602868 | 1_4:+73115264 | None:intergenic |
| GCTGGTGGCTTCTTGTGGTG+AGG | 0.604135 | 1_4:-73115153 | Msa0184000:CDS |
| TATGGTGATAGAGTGCATCC+CGG | 0.611166 | 1_4:-73116480 | Msa0184000:intron |
| TTTCTTGTTCTTCTTCATGG+TGG | 0.614678 | 1_4:-73114941 | Msa0184000:CDS |
| GGGCAAATACCTGTCTATGA+CGG | 0.619121 | 1_4:+73116016 | None:intergenic |
| CGGAGTAGGAGAAGTGGCGG+CGG | 0.622097 | 1_4:-73116460 | Msa0184000:CDS |
| TCCCGGAGTAGGAGAAGTGG+CGG | 0.626510 | 1_4:-73116463 | Msa0184000:CDS |
| GAATGAATATGGAAAAGGGG+TGG | 0.632951 | 1_4:+73117017 | None:intergenic |
| GGCTTCAAACTTGAGTGATG+GGG | 0.633313 | 1_4:-73115179 | Msa0184000:CDS |
| ATGGAATGAATATGGAAAAG+GGG | 0.634026 | 1_4:+73117014 | None:intergenic |
| TATCAGGACACTGCGATGGG+AGG | 0.638311 | 1_4:-73114813 | Msa0184000:intron |
| GCATCCCGGAGTAGGAGAAG+TGG | 0.641070 | 1_4:-73116466 | Msa0184000:CDS |
| GCATGTTATAGTGTCTGGGA+TGG | 0.645145 | 1_4:-73114966 | Msa0184000:CDS |
| TGGTGGCGGCAGAACAATCG+CGG | 0.651883 | 1_4:-73116423 | Msa0184000:CDS |
| ATGATTCATAACCTGAATGG+CGG | 0.655806 | 1_4:+73116881 | None:intergenic |
| AGGCGAATAAAAGATTAGAG+AGG | 0.661694 | 1_4:+73117065 | None:intergenic |
| TGACAGCCAGATAAGTGGTG+AGG | 0.678207 | 1_4:+73116125 | None:intergenic |
| AATGGCGGAAGCGAAGTCAG+AGG | 0.682812 | 1_4:+73116896 | None:intergenic |
| GATGGTTTGGAATCTTCCCG+AGG | 0.685332 | 1_4:-73115281 | Msa0184000:CDS |
| GAAGGAAAACGTAAGAACCA+AGG | 0.689997 | 1_4:+73117045 | None:intergenic |
| GCTTCAAACTTGAGTGATGG+GGG | 0.710727 | 1_4:-73115178 | Msa0184000:CDS |
| TGGCGGCAGAACAATCGCGG+CGG | 0.757815 | 1_4:-73116420 | Msa0184000:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAACATAAACAAATATTATT+GGG | + | chr1_4:73114953-73114972 | None:intergenic | 10.0% |
| !! | ATAACATAAACAAATATTAT+TGG | + | chr1_4:73114954-73114973 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_4:73116195-73116214 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_4:73116195-73116214 | None:intergenic | 100.0% |
| !!! | TTTTCATTCTAAAAAAACAA+GGG | + | chr1_4:73115007-73115026 | None:intergenic | 15.0% |
| !!! | TTTTTCATTCTAAAAAAACA+AGG | + | chr1_4:73115008-73115027 | None:intergenic | 15.0% |
| !! | GAAGTTAAAATTTCTAAATT+TGG | - | chr1_4:73115265-73115284 | Msa0184000:CDS | 15.0% |
| !! | AGTGAATAATATTATTTGAT+CGG | - | chr1_4:73115837-73115856 | Msa0184000:intron | 15.0% |
| !!! | TATTGACTTTTATAAATGTT+TGG | + | chr1_4:73116066-73116085 | None:intergenic | 15.0% |
| !! | GAATAATAATAGTAATAGAG+AGG | + | chr1_4:73114798-73114817 | None:intergenic | 20.0% |
| !! | TAAACAAATATTATTGGGTA+CGG | + | chr1_4:73114948-73114967 | None:intergenic | 20.0% |
| !!! | ATCATTTTAATTGCTTTATC+TGG | - | chr1_4:73114978-73114997 | Msa0184000:CDS | 20.0% |
| !!! | TCATTTTAATTGCTTTATCT+GGG | - | chr1_4:73114979-73114998 | Msa0184000:CDS | 20.0% |
| !!! | GTAAAGTTAGTATTTTTATG+TGG | - | chr1_4:73115033-73115052 | Msa0184000:intron | 20.0% |
| !!! | TAAACAGATTTTTATTCGTT+TGG | - | chr1_4:73115149-73115168 | Msa0184000:CDS | 20.0% |
| !!! | AAACAGATTTTTATTCGTTT+GGG | - | chr1_4:73115150-73115169 | Msa0184000:CDS | 20.0% |
| !!! | ATAACTTTTTTGCTATTCAA+GGG | + | chr1_4:73115188-73115207 | None:intergenic | 20.0% |
| !!! | TTTATAAATGTTTGGATTAG+CGG | + | chr1_4:73116058-73116077 | None:intergenic | 20.0% |
| !! | TTTAATATAAGATGATGAAG+TGG | - | chr1_4:73116110-73116129 | Msa0184000:intron | 20.0% |
| !! | TTAATATAAGATGATGAAGT+GGG | - | chr1_4:73116111-73116130 | Msa0184000:intron | 20.0% |
| !!! | ACTACTAAAACTTCAATTTT+GGG | + | chr1_4:73116219-73116238 | None:intergenic | 20.0% |
| !! | AAAGAAAGAAGAAAAAAAAG+GGG | + | chr1_4:73116382-73116401 | None:intergenic | 20.0% |
| !! | GAAAGAAAGAAGAAAAAAAA+GGG | + | chr1_4:73116383-73116402 | None:intergenic | 20.0% |
| !! | AGAAAGAAAGAAGAAAAAAA+AGG | + | chr1_4:73116384-73116403 | None:intergenic | 20.0% |
| ! | AATGGAATGAATATGGAAAA+GGG | + | chr1_4:73114766-73114785 | None:intergenic | 25.0% |
| !! | TTTTCACTCTTTTTCTCTTT+TGG | - | chr1_4:73114920-73114939 | Msa0184000:CDS | 25.0% |
| !! | TTTCACTCTTTTTCTCTTTT+GGG | - | chr1_4:73114921-73114940 | Msa0184000:CDS | 25.0% |
| !! | AACAGATTTTTATTCGTTTG+GGG | - | chr1_4:73115151-73115170 | Msa0184000:CDS | 25.0% |
| !!! | GATAACTTTTTTGCTATTCA+AGG | + | chr1_4:73115189-73115208 | None:intergenic | 25.0% |
| !!! | CTAAATTTGGTTGCTTTTTA+TGG | - | chr1_4:73115278-73115297 | Msa0184000:CDS | 25.0% |
| ! | AACACAAACATATGATTTCA+GGG | + | chr1_4:73115783-73115802 | None:intergenic | 25.0% |
| ! | TATTCACTCTAACATATTCA+GGG | + | chr1_4:73115825-73115844 | None:intergenic | 25.0% |
| ! | TTATTCACTCTAACATATTC+AGG | + | chr1_4:73115826-73115845 | None:intergenic | 25.0% |
| !!! | TTTTGTGTTCTAAAAGAACA+GGG | + | chr1_4:73115898-73115917 | None:intergenic | 25.0% |
| !!! | ATTTTGTGTTCTAAAAGAAC+AGG | + | chr1_4:73115899-73115918 | None:intergenic | 25.0% |
| ! | CATTGCAACTTGAAATTTAT+TGG | + | chr1_4:73115941-73115960 | None:intergenic | 25.0% |
| !!! | AAATTTCAAGTTGCAATGTT+TGG | - | chr1_4:73115943-73115962 | Msa0184000:intron | 25.0% |
| ! | CAATAATGTACTTCTTGATA+CGG | - | chr1_4:73116081-73116100 | Msa0184000:intron | 25.0% |
| ! | AATAATGTACTTCTTGATAC+GGG | - | chr1_4:73116082-73116101 | Msa0184000:intron | 25.0% |
| !! | TACTAAAACTTCAATTTTGG+GGG | + | chr1_4:73116217-73116236 | None:intergenic | 25.0% |
| !! | CTACTAAAACTTCAATTTTG+GGG | + | chr1_4:73116218-73116237 | None:intergenic | 25.0% |
| !! | GACTACTAAAACTTCAATTT+TGG | + | chr1_4:73116220-73116239 | None:intergenic | 25.0% |
| !!! | TCTTTTATTTTTGTCTACGA+TGG | - | chr1_4:73116401-73116420 | Msa0184000:intron | 25.0% |
| ! | TCATTCTGTATGTTCTTATT+TGG | - | chr1_4:73116662-73116681 | Msa0184000:intron | 25.0% |
| ! | TTATTACATTTCATGCTTAC+AGG | - | chr1_4:73116738-73116757 | Msa0184000:intron | 25.0% |
| !! | TTTTCTCTGTAAGCTTATTT+TGG | - | chr1_4:73116761-73116780 | Msa0184000:intron | 25.0% |
| ! | ATACTGCAAAGATTTCATTA+AGG | + | chr1_4:73116890-73116909 | None:intergenic | 25.0% |
| !! | TATGCTTTAACAACATCTTT+TGG | - | chr1_4:73116907-73116926 | Msa0184000:CDS | 25.0% |
| ATAAAAGATTAGAGAGGAGA+AGG | + | chr1_4:73114708-73114727 | None:intergenic | 30.0% | |
| ATGGAATGAATATGGAAAAG+GGG | + | chr1_4:73114765-73114784 | None:intergenic | 30.0% | |
| GAATGGAATGAATATGGAAA+AGG | + | chr1_4:73114767-73114786 | None:intergenic | 30.0% | |
| TGAATGGAATGGAATGAATA+TGG | + | chr1_4:73114773-73114792 | None:intergenic | 30.0% | |
| TAGTAATAGAGAGGAATGAA+TGG | + | chr1_4:73114789-73114808 | None:intergenic | 30.0% | |
| ATGATGATTCATAACCTGAA+TGG | + | chr1_4:73114901-73114920 | None:intergenic | 30.0% | |
| !! | TTTGCTATTCAAGGGAAATT+GGG | + | chr1_4:73115180-73115199 | None:intergenic | 30.0% |
| !!! | TTTTGCTATTCAAGGGAAAT+TGG | + | chr1_4:73115181-73115200 | None:intergenic | 30.0% |
| ! | TCATAAGTGTTTTGTGTTTC+TGG | - | chr1_4:73115671-73115690 | Msa0184000:intron | 30.0% |
| CAACACAAACATATGATTTC+AGG | + | chr1_4:73115784-73115803 | None:intergenic | 30.0% | |
| CTGAAATCATATGTTTGTGT+TGG | - | chr1_4:73115782-73115801 | Msa0184000:intron | 30.0% | |
| TCTATGTTTACTGCATCAAA+TGG | - | chr1_4:73116141-73116160 | Msa0184000:CDS | 30.0% | |
| ! | ACTAAAACTTCAATTTTGGG+GGG | + | chr1_4:73116216-73116235 | None:intergenic | 30.0% |
| !! | TCTTTTGGTAGCATTTGTTA+TGG | - | chr1_4:73116922-73116941 | Msa0184000:CDS | 30.0% |
| TTATGGCTCATTATTTACTG+CGG | - | chr1_4:73116939-73116958 | Msa0184000:exon | 30.0% | |
| TAACAAATATGCCTATGTTC+AGG | - | chr1_4:73117180-73117199 | Msa0184000:five_prime_UTR | 30.0% | |
| !! | CAATGGGTTATGTTATGGTA+GGG | + | chr1_4:73114684-73114703 | None:intergenic | 35.0% |
| !! | TCAATGGGTTATGTTATGGT+AGG | + | chr1_4:73114685-73114704 | None:intergenic | 35.0% |
| !! | AAGGTCAATGGGTTATGTTA+TGG | + | chr1_4:73114689-73114708 | None:intergenic | 35.0% |
| AGGCGAATAAAAGATTAGAG+AGG | + | chr1_4:73114714-73114733 | None:intergenic | 35.0% | |
| ! | CTCTAATCTTTTATTCGCCT+TGG | - | chr1_4:73114714-73114733 | Msa0184000:intron | 35.0% |
| ATAGAGAGGAATGAATGGAA+TGG | + | chr1_4:73114784-73114803 | None:intergenic | 35.0% | |
| ATGATTCATAACCTGAATGG+CGG | + | chr1_4:73114898-73114917 | None:intergenic | 35.0% | |
| TGTGATTCATTTGATTGCAC+TGG | - | chr1_4:73115408-73115427 | Msa0184000:intron | 35.0% | |
| GTGATTCATTTGATTGCACT+GGG | - | chr1_4:73115409-73115428 | Msa0184000:intron | 35.0% | |
| AACATTGATAAGTACACTCC+TGG | - | chr1_4:73115484-73115503 | Msa0184000:intron | 35.0% | |
| ATAAAGCGGCCAATAAGTTT+CGG | + | chr1_4:73115536-73115555 | None:intergenic | 35.0% | |
| TTTCATCATTTGAGTAGCCT+GGG | + | chr1_4:73115617-73115636 | None:intergenic | 35.0% | |
| ATGTTATATCCGTCATAGAC+AGG | - | chr1_4:73115751-73115770 | Msa0184000:intron | 35.0% | |
| ! | TCAAGTTGCAATGTTTGGAT+TGG | - | chr1_4:73115948-73115967 | Msa0184000:intron | 35.0% |
| !! | TAAAACTTCAATTTTGGGGG+GGG | + | chr1_4:73116214-73116233 | None:intergenic | 35.0% |
| !! | CTAAAACTTCAATTTTGGGG+GGG | + | chr1_4:73116215-73116234 | None:intergenic | 35.0% |
| CTGTTTATTTGCATTTCCGT+TGG | + | chr1_4:73116248-73116267 | None:intergenic | 35.0% | |
| ACGGAAATGCAAATAAACAG+CGG | - | chr1_4:73116248-73116267 | Msa0184000:CDS | 35.0% | |
| ! | ATGAGAAAGTATGCATAGAG+CGG | + | chr1_4:73116300-73116319 | None:intergenic | 35.0% |
| AGTTTGTAGATGAATGTTGC+AGG | - | chr1_4:73116327-73116346 | Msa0184000:intron | 35.0% | |
| ! | TTGCAGGTTCCTAATTTTTG+TGG | - | chr1_4:73116343-73116362 | Msa0184000:intron | 35.0% |
| GAAACCAAGCCACAAAAATT+AGG | + | chr1_4:73116355-73116374 | None:intergenic | 35.0% | |
| AAAAAGCTGTGAAGATGGTT+TGG | - | chr1_4:73116482-73116501 | Msa0184000:intron | 35.0% | |
| !!! | TCATGTTTGCTGTGCTTTTA+TGG | - | chr1_4:73116539-73116558 | Msa0184000:intron | 35.0% |
| ! | CTGTATGTTCTTATTTGGAC+TGG | - | chr1_4:73116667-73116686 | Msa0184000:intron | 35.0% |
| !! | GTTCTTATTTGGACTGGTTA+TGG | - | chr1_4:73116673-73116692 | Msa0184000:intron | 35.0% |
| !!! | TCTGTAAGCTTATTTTGGAC+AGG | - | chr1_4:73116766-73116785 | Msa0184000:intron | 35.0% |
| GTGTTTCTTGTTCTTCTTCA+TGG | - | chr1_4:73116832-73116851 | Msa0184000:intron | 35.0% | |
| TTTCTTGTTCTTCTTCATGG+TGG | - | chr1_4:73116835-73116854 | Msa0184000:intron | 35.0% | |
| GATTTCATTAAGGAGTTAGC+AGG | + | chr1_4:73116880-73116899 | None:intergenic | 35.0% | |
| !! | TCGTTTTTCTTTCAGATACG+TGG | - | chr1_4:73117070-73117089 | Msa0184000:five_prime_UTR | 35.0% |
| TGATTTCCTCTTTCATCTTG+TGG | - | chr1_4:73117138-73117157 | Msa0184000:five_prime_UTR | 35.0% | |
| GTTATGTTATGGTAGGGTGA+TGG | + | chr1_4:73114678-73114697 | None:intergenic | 40.0% | |
| TTAGAGAGGAGAAGGTCAAT+GGG | + | chr1_4:73114700-73114719 | None:intergenic | 40.0% | |
| ATTAGAGAGGAGAAGGTCAA+TGG | + | chr1_4:73114701-73114720 | None:intergenic | 40.0% | |
| GAAGGAAAACGTAAGAACCA+AGG | + | chr1_4:73114734-73114753 | None:intergenic | 40.0% | |
| GAATGAATATGGAAAAGGGG+TGG | + | chr1_4:73114762-73114781 | None:intergenic | 40.0% | |
| TGTTTCTCCATTCCCAATGA+TGG | - | chr1_4:73114833-73114852 | Msa0184000:CDS | 40.0% | |
| AAGAGGGAGAATCCATCATT+GGG | + | chr1_4:73114848-73114867 | None:intergenic | 40.0% | |
| AAAGAGGGAGAATCCATCAT+TGG | + | chr1_4:73114849-73114868 | None:intergenic | 40.0% | |
| GAGGAAGAAGAGGAAAAAGA+GGG | + | chr1_4:73114864-73114883 | None:intergenic | 40.0% | |
| AGAGGAAGAAGAGGAAAAAG+AGG | + | chr1_4:73114865-73114884 | None:intergenic | 40.0% | |
| !! | GTCATTGACTTTCTTTGACC+TGG | - | chr1_4:73115222-73115241 | Msa0184000:CDS | 40.0% |
| TTCTGACTCTTCAAGAAACC+AGG | + | chr1_4:73115243-73115262 | None:intergenic | 40.0% | |
| !!! | TGGCATGATGTTTTCTGGTT+AGG | - | chr1_4:73115379-73115398 | Msa0184000:intron | 40.0% |
| ! | ATTGCACTGGGATTCCTTTT+GGG | - | chr1_4:73115421-73115440 | Msa0184000:intron | 40.0% |
| CCAATAAGTTTCGGTTAACC+CGG | + | chr1_4:73115527-73115546 | None:intergenic | 40.0% | |
| ! | AACTTATTGGCCGCTTTATG+CGG | - | chr1_4:73115537-73115556 | Msa0184000:intron | 40.0% |
| ! | ATGGACTTGGTTGTTGTTGT+TGG | - | chr1_4:73115588-73115607 | Msa0184000:intron | 40.0% |
| ! | TGGACTTGGTTGTTGTTGTT+GGG | - | chr1_4:73115589-73115608 | Msa0184000:intron | 40.0% |
| CTTTCATCATTTGAGTAGCC+TGG | + | chr1_4:73115618-73115637 | None:intergenic | 40.0% | |
| ACTTATGACAGCCAGATAAG+TGG | + | chr1_4:73115659-73115678 | None:intergenic | 40.0% | |
| ! | TCTGGACTAACCAGATTTTC+TGG | - | chr1_4:73115689-73115708 | Msa0184000:intron | 40.0% |
| ! | CTGGACTAACCAGATTTTCT+GGG | - | chr1_4:73115690-73115709 | Msa0184000:intron | 40.0% |
| ! | TGGACTAACCAGATTTTCTG+GGG | - | chr1_4:73115691-73115710 | Msa0184000:intron | 40.0% |
| ! | AGTTGCAATGTTTGGATTGG+CGG | - | chr1_4:73115951-73115970 | Msa0184000:intron | 40.0% |
| CGGCGAGATTGATAGAATTA+TGG | - | chr1_4:73115971-73115990 | Msa0184000:intron | 40.0% | |
| !! | AAAACTTCAATTTTGGGGGG+GGG | + | chr1_4:73116213-73116232 | None:intergenic | 40.0% |
| ! | TTTTAGTAGTCTCCTGCCAA+CGG | - | chr1_4:73116229-73116248 | Msa0184000:CDS | 40.0% |
| TTATTTGCATTTCCGTTGGC+AGG | + | chr1_4:73116244-73116263 | None:intergenic | 40.0% | |
| ! | GCGGTTAGTTCAGTTTCTTA+AGG | - | chr1_4:73116267-73116286 | Msa0184000:CDS | 40.0% |
| ! | TGAGAAAGTATGCATAGAGC+GGG | + | chr1_4:73116299-73116318 | None:intergenic | 40.0% |
| ! | GGTTCCTAATTTTTGTGGCT+TGG | - | chr1_4:73116348-73116367 | Msa0184000:intron | 40.0% |
| AGAAAAGAAGCCATGAGGAT+TGG | + | chr1_4:73116429-73116448 | None:intergenic | 40.0% | |
| TCTGCAAAAAGCTGTGAAGA+TGG | - | chr1_4:73116477-73116496 | Msa0184000:intron | 40.0% | |
| !!! | GTTTGCTGTGCTTTTATGGA+TGG | - | chr1_4:73116543-73116562 | Msa0184000:intron | 40.0% |
| !! | TGCTTTTATGGATGGCCTTA+TGG | - | chr1_4:73116551-73116570 | Msa0184000:intron | 40.0% |
| TGGCTTCAAACTTGAGTGAT+GGG | - | chr1_4:73116596-73116615 | Msa0184000:intron | 40.0% | |
| AATAACAGCGTCATCAGATG+AGG | + | chr1_4:73116723-73116742 | None:intergenic | 40.0% | |
| ACTGTGCATGTTATAGTGTC+TGG | - | chr1_4:73116805-73116824 | Msa0184000:intron | 40.0% | |
| CTGTGCATGTTATAGTGTCT+GGG | - | chr1_4:73116806-73116825 | Msa0184000:intron | 40.0% | |
| CATTATTTACTGCGGCTATC+AGG | - | chr1_4:73116947-73116966 | Msa0184000:exon | 40.0% | |
| TCTTTCAGATACGTGGACTT+AGG | - | chr1_4:73117077-73117096 | Msa0184000:five_prime_UTR | 40.0% | |
| ACAATCTGGTACCTGAACAT+AGG | + | chr1_4:73117194-73117213 | None:intergenic | 40.0% | |
| ! | ATGTTATGGTAGGGTGATGG+TGG | + | chr1_4:73114675-73114694 | None:intergenic | 45.0% |
| GGAAAAGGGGTGGAAAATGA+AGG | + | chr1_4:73114752-73114771 | None:intergenic | 45.0% | |
| GGAGAATCCATCATTGGGAA+TGG | + | chr1_4:73114843-73114862 | None:intergenic | 45.0% | |
| TATGGTGATAGAGTGCATCC+CGG | - | chr1_4:73115296-73115315 | Msa0184000:CDS | 45.0% | |
| ! | GATTGCACTGGGATTCCTTT+TGG | - | chr1_4:73115420-73115439 | Msa0184000:intron | 45.0% |
| ! | TTGCACTGGGATTCCTTTTG+GGG | - | chr1_4:73115422-73115441 | Msa0184000:intron | 45.0% |
| !! | AAGTACACTCCTGGTCTTAC+CGG | - | chr1_4:73115493-73115512 | Msa0184000:intron | 45.0% |
| CCGGGTTAACCGAAACTTAT+TGG | - | chr1_4:73115524-73115543 | Msa0184000:intron | 45.0% | |
| GAATTGGGACTGTTCTTGGA+TGG | - | chr1_4:73115569-73115588 | Msa0184000:intron | 45.0% | |
| TCACATCCTCACCACTTATC+TGG | - | chr1_4:73115645-73115664 | Msa0184000:intron | 45.0% | |
| ! | GGACTAACCAGATTTTCTGG+GGG | - | chr1_4:73115692-73115711 | Msa0184000:intron | 45.0% |
| AAAGCAACCCCCAGAAAATC+TGG | + | chr1_4:73115702-73115721 | None:intergenic | 45.0% | |
| GGGCAAATACCTGTCTATGA+CGG | + | chr1_4:73115763-73115782 | None:intergenic | 45.0% | |
| TGTTGGATTGCAGAAGCGAT+TGG | - | chr1_4:73115799-73115818 | Msa0184000:intron | 45.0% | |
| !! | GTTTGGATTAGCGGTGAGTT+TGG | + | chr1_4:73116049-73116068 | None:intergenic | 45.0% |
| !! | AAACTTCAATTTTGGGGGGG+GGG | + | chr1_4:73116212-73116231 | None:intergenic | 45.0% |
| TACGATGGTTCCAATCCTCA+TGG | - | chr1_4:73116416-73116435 | Msa0184000:intron | 45.0% | |
| GGAGAAGAAAAGAAGCCATG+AGG | + | chr1_4:73116434-73116453 | None:intergenic | 45.0% | |
| CAGCATCGTAAATGGAAGTC+TGG | + | chr1_4:73116455-73116474 | None:intergenic | 45.0% | |
| CAGACTTCCATTTACGATGC+TGG | - | chr1_4:73116453-73116472 | Msa0184000:CDS | 45.0% | |
| TGCAGAACCAGCATCGTAAA+TGG | + | chr1_4:73116463-73116482 | None:intergenic | 45.0% | |
| !! | TGGATGGCCTTATGGTCATT+TGG | - | chr1_4:73116559-73116578 | Msa0184000:intron | 45.0% |
| TGCTGCTCCAAATGACCATA+AGG | + | chr1_4:73116569-73116588 | None:intergenic | 45.0% | |
| ! | TTATGGTCATTTGGAGCAGC+AGG | - | chr1_4:73116568-73116587 | Msa0184000:intron | 45.0% |
| GTGGCTTCAAACTTGAGTGA+TGG | - | chr1_4:73116595-73116614 | Msa0184000:intron | 45.0% | |
| GGCTTCAAACTTGAGTGATG+GGG | - | chr1_4:73116597-73116616 | Msa0184000:intron | 45.0% | |
| GCTTCAAACTTGAGTGATGG+GGG | - | chr1_4:73116598-73116617 | Msa0184000:intron | 45.0% | |
| GCATGTTATAGTGTCTGGGA+TGG | - | chr1_4:73116810-73116829 | Msa0184000:intron | 45.0% | |
| TCTTCTTCATGGTGGTAGAG+AGG | - | chr1_4:73116843-73116862 | Msa0184000:intron | 45.0% | |
| CGTGGACTTAGGTCAAAGAT+TGG | - | chr1_4:73117088-73117107 | Msa0184000:five_prime_UTR | 45.0% | |
| GAGTCTCCACAAGATGAAAG+AGG | + | chr1_4:73117147-73117166 | None:intergenic | 45.0% | |
| !! | ATTAATTAGTATAATAATTA+GGG | + | chr1_4:73114641-73114660 | None:intergenic | 5.0% |
| !! | TATTAATTAGTATAATAATT+AGG | + | chr1_4:73114642-73114661 | None:intergenic | 5.0% |
| !! | TTATGGTAGGGTGATGGTGG+TGG | + | chr1_4:73114672-73114691 | None:intergenic | 50.0% |
| AGCGAAGTCAGAGGAAGAAG+AGG | + | chr1_4:73114874-73114893 | None:intergenic | 50.0% | |
| CACGCAGTGAAGTGATGAGA+AGG | + | chr1_4:73115074-73115093 | None:intergenic | 50.0% | |
| ! | TGCACTGGGATTCCTTTTGG+GGG | - | chr1_4:73115423-73115442 | Msa0184000:intron | 50.0% |
| !! | GGATTCCTTTTGGGGGTTCT+TGG | - | chr1_4:73115430-73115449 | Msa0184000:intron | 50.0% |
| TGAGACCAAGAACCCCCAAA+AGG | + | chr1_4:73115438-73115457 | None:intergenic | 50.0% | |
| TGGGGGTTCTTGGTCTCAAT+AGG | - | chr1_4:73115440-73115459 | Msa0184000:intron | 50.0% | |
| !! | AGTACACTCCTGGTCTTACC+GGG | - | chr1_4:73115494-73115513 | Msa0184000:intron | 50.0% |
| GGTGGAATTGGGACTGTTCT+TGG | - | chr1_4:73115565-73115584 | Msa0184000:intron | 50.0% | |
| ! | GGACTGTTCTTGGATGGACT+TGG | - | chr1_4:73115575-73115594 | Msa0184000:intron | 50.0% |
| ! | GTTGTTGTTGTTGGGTTCCC+AGG | - | chr1_4:73115597-73115616 | Msa0184000:intron | 50.0% |
| TGACAGCCAGATAAGTGGTG+AGG | + | chr1_4:73115654-73115673 | None:intergenic | 50.0% | |
| !! | AACTTCAATTTTGGGGGGGG+GGG | + | chr1_4:73116211-73116230 | None:intergenic | 50.0% |
| ! | GATGGTTTGGAATCTTCCCG+AGG | - | chr1_4:73116495-73116514 | Msa0184000:intron | 50.0% |
| ACACGACACTCTCATGACCT+CGG | + | chr1_4:73116515-73116534 | None:intergenic | 50.0% | |
| ! | ATTTGGAGCAGCAGGTGTTG+TGG | - | chr1_4:73116576-73116595 | Msa0184000:intron | 50.0% |
| ! | AATGGCGGAAGCGAAGTCAG+AGG | + | chr1_4:73114883-73114902 | None:intergenic | 55.0% |
| TGACTTCGCTTCCGCCATTC+AGG | - | chr1_4:73114884-73114903 | Msa0184000:CDS | 55.0% | |
| GATAGAGTGCATCCCGGAGT+AGG | - | chr1_4:73115302-73115321 | Msa0184000:CDS | 55.0% | |
| !! | CAGCAGTGAAATGGTGGTGG+CGG | - | chr1_4:73115339-73115358 | Msa0184000:intron | 55.0% |
| ! | GGCGGTGGCATGATGTTTTC+TGG | - | chr1_4:73115374-73115393 | Msa0184000:intron | 55.0% |
| GCATGATTCCCGGTAAGACC+AGG | + | chr1_4:73115505-73115524 | None:intergenic | 55.0% | |
| GGTCTTACCGGGAATCATGC+CGG | - | chr1_4:73115505-73115524 | Msa0184000:intron | 55.0% | |
| GTCTTACCGGGAATCATGCC+GGG | - | chr1_4:73115506-73115525 | Msa0184000:intron | 55.0% | |
| GGTTAACCCGGCATGATTCC+CGG | + | chr1_4:73115515-73115534 | None:intergenic | 55.0% | |
| TATGCGGCTGCTGGTGGAAT+TGG | - | chr1_4:73115553-73115572 | Msa0184000:intron | 55.0% | |
| ATGCGGCTGCTGGTGGAATT+GGG | - | chr1_4:73115554-73115573 | Msa0184000:intron | 55.0% | |
| !! | ACTTCAATTTTGGGGGGGGG+GGG | + | chr1_4:73116210-73116229 | None:intergenic | 55.0% |
| CACGACACTCTCATGACCTC+GGG | + | chr1_4:73116514-73116533 | None:intergenic | 55.0% | |
| GGCTATCAGGACACTGCGAT+GGG | - | chr1_4:73116960-73116979 | Msa0184000:five_prime_UTR | 55.0% | |
| TATCAGGACACTGCGATGGG+AGG | - | chr1_4:73116963-73116982 | Msa0184000:five_prime_UTR | 55.0% | |
| GCATCCCGGAGTAGGAGAAG+TGG | - | chr1_4:73115310-73115329 | Msa0184000:CDS | 60.0% | |
| TCCCGGAGTAGGAGAAGTGG+CGG | - | chr1_4:73115313-73115332 | Msa0184000:CDS | 60.0% | |
| CGGCAGCAGTGAAATGGTGG+TGG | - | chr1_4:73115336-73115355 | Msa0184000:intron | 60.0% | |
| !! | TGGTGGCGGCAGAACAATCG+CGG | - | chr1_4:73115353-73115372 | Msa0184000:intron | 60.0% |
| CCACCAGCAGCCGCATAAAG+CGG | + | chr1_4:73115550-73115569 | None:intergenic | 60.0% | |
| ! | CTGGGGGTTGCTTTCGCTGT+TGG | - | chr1_4:73115708-73115727 | Msa0184000:intron | 60.0% |
| !! | TTCAATTTTGGGGGGGGGGG+GGG | + | chr1_4:73116208-73116227 | None:intergenic | 60.0% |
| !! | CTTCAATTTTGGGGGGGGGG+GGG | + | chr1_4:73116209-73116228 | None:intergenic | 60.0% |
| ! | ACTTGAGTGATGGGGGACGC+TGG | - | chr1_4:73116605-73116624 | Msa0184000:intron | 60.0% |
| GCTGGTGGCTTCTTGTGGTG+AGG | - | chr1_4:73116623-73116642 | Msa0184000:intron | 60.0% | |
| GGTGGCTTCTTGTGGTGAGG+TGG | - | chr1_4:73116626-73116645 | Msa0184000:intron | 60.0% | |
| CGGCTATCAGGACACTGCGA+TGG | - | chr1_4:73116959-73116978 | Msa0184000:five_prime_UTR | 60.0% | |
| GCCGCCACTTCTCCTACTCC+GGG | + | chr1_4:73115317-73115336 | None:intergenic | 65.0% | |
| CGCCGCCACTTCTCCTACTC+CGG | + | chr1_4:73115318-73115337 | None:intergenic | 65.0% | |
| CGGAGTAGGAGAAGTGGCGG+CGG | - | chr1_4:73115316-73115335 | Msa0184000:CDS | 65.0% | |
| TGGCGGCGGCAGCAGTGAAA+TGG | - | chr1_4:73115330-73115349 | Msa0184000:intron | 65.0% | |
| CGGCGGCAGCAGTGAAATGG+TGG | - | chr1_4:73115333-73115352 | Msa0184000:intron | 65.0% | |
| TGGCGGCAGAACAATCGCGG+CGG | - | chr1_4:73115356-73115375 | Msa0184000:intron | 65.0% | |
| ! | TGGCCGCTTTATGCGGCTGC+TGG | - | chr1_4:73115544-73115563 | Msa0184000:intron | 65.0% |
| CCGCTTTATGCGGCTGCTGG+TGG | - | chr1_4:73115547-73115566 | Msa0184000:intron | 65.0% | |
| !! | TCAATTTTGGGGGGGGGGGG+GGG | + | chr1_4:73116207-73116226 | None:intergenic | 65.0% |
| ! | TGAGTGATGGGGGACGCTGG+TGG | - | chr1_4:73116608-73116627 | Msa0184000:intron | 65.0% |
| GGGACGCTGGTGGCTTCTTG+TGG | - | chr1_4:73116618-73116637 | Msa0184000:intron | 65.0% | |
| CGGCAGAACAATCGCGGCGG+TGG | - | chr1_4:73115359-73115378 | Msa0184000:intron | 70.0% | |
| !! | AATTTTGGGGGGGGGGGGGG+GGG | + | chr1_4:73116205-73116224 | None:intergenic | 70.0% |
| !! | CAATTTTGGGGGGGGGGGGG+GGG | + | chr1_4:73116206-73116225 | None:intergenic | 70.0% |
| !! | ATTTTGGGGGGGGGGGGGGG+GGG | + | chr1_4:73116204-73116223 | None:intergenic | 75.0% |
| !!! | TTTTGGGGGGGGGGGGGGGG+GGG | + | chr1_4:73116203-73116222 | None:intergenic | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | + | chr1_4:73116202-73116221 | None:intergenic | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr1_4:73116201-73116220 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr1_4:73116200-73116219 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 73114582 | 73117216 | 73114582 | ID=Msa0184000;Name=Msa0184000 |
| chr1_4 | mRNA | 73114582 | 73117216 | 73114582 | ID=Msa0184000-mRNA-1;Parent=Msa0184000;Name=Msa0184000-mRNA-1;_AED=0.10;_eAED=0.10;_QI=267|0.33|0.14|1|1|1|7|0|327 |
| chr1_4 | exon | 73114582 | 73114713 | 73114582 | ID=Msa0184000-mRNA-1:exon:24826;Parent=Msa0184000-mRNA-1 |
| chr1_4 | exon | 73114814 | 73115010 | 73114814 | ID=Msa0184000-mRNA-1:exon:24825;Parent=Msa0184000-mRNA-1 |
| chr1_4 | exon | 73115101 | 73115342 | 73115101 | ID=Msa0184000-mRNA-1:exon:24824;Parent=Msa0184000-mRNA-1 |
| chr1_4 | exon | 73116026 | 73116095 | 73116026 | ID=Msa0184000-mRNA-1:exon:24823;Parent=Msa0184000-mRNA-1 |
| chr1_4 | exon | 73116122 | 73116336 | 73116122 | ID=Msa0184000-mRNA-1:exon:24822;Parent=Msa0184000-mRNA-1 |
| chr1_4 | exon | 73116421 | 73116491 | 73116421 | ID=Msa0184000-mRNA-1:exon:24821;Parent=Msa0184000-mRNA-1 |
| chr1_4 | exon | 73116893 | 73117216 | 73116893 | ID=Msa0184000-mRNA-1:exon:24820;Parent=Msa0184000-mRNA-1 |
| chr1_4 | five_prime_UTR | 73116950 | 73117216 | 73116950 | ID=Msa0184000-mRNA-1:five_prime_utr;Parent=Msa0184000-mRNA-1 |
| chr1_4 | CDS | 73116893 | 73116949 | 73116893 | ID=Msa0184000-mRNA-1:cds;Parent=Msa0184000-mRNA-1 |
| chr1_4 | CDS | 73116421 | 73116491 | 73116421 | ID=Msa0184000-mRNA-1:cds;Parent=Msa0184000-mRNA-1 |
| chr1_4 | CDS | 73116122 | 73116336 | 73116122 | ID=Msa0184000-mRNA-1:cds;Parent=Msa0184000-mRNA-1 |
| chr1_4 | CDS | 73116026 | 73116095 | 73116026 | ID=Msa0184000-mRNA-1:cds;Parent=Msa0184000-mRNA-1 |
| chr1_4 | CDS | 73115101 | 73115342 | 73115101 | ID=Msa0184000-mRNA-1:cds;Parent=Msa0184000-mRNA-1 |
| chr1_4 | CDS | 73114814 | 73115010 | 73114814 | ID=Msa0184000-mRNA-1:cds;Parent=Msa0184000-mRNA-1 |
| chr1_4 | CDS | 73114582 | 73114713 | 73114582 | ID=Msa0184000-mRNA-1:cds;Parent=Msa0184000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
