AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0712260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0712260 MtrunA17_Chr5g0396691 98.036 662 13 0 1 662 1 662 0.0 1339
Msa0712260 MtrunA17_Chr5g0396711 96.375 662 24 0 1 662 1 662 0.0 1314
Msa0712260 MtrunA17_Chr8g0388081 77.852 596 132 0 62 657 1 596 0.0 1014
Msa0712260 MtrunA17_Chr4g0034181 58.154 650 270 2 6 655 5 652 0.0 811
Msa0712260 MtrunA17_Chr1g0162621 56.836 651 279 2 6 655 5 654 0.0 795
Msa0712260 MtrunA17_Chr1g0194371 51.437 661 318 2 4 661 2 662 0.0 696
Msa0712260 MtrunA17_Chr7g0270221 49.379 644 287 1 4 647 2 606 0.0 639
Msa0712260 MtrunA17_Chr1g0205711 40.718 641 360 10 27 659 61 689 1.42e-155 465
Msa0712260 MtrunA17_Chr3g0120731 32.822 652 394 13 39 654 83 726 4.36e-99 319
Msa0712260 MtrunA17_Chr1g0160041 32.312 653 392 14 42 656 56 696 2.56e-95 308
Msa0712260 MtrunA17_Chr3g0124631 31.211 644 398 13 48 654 61 696 1.03e-93 304
Msa0712260 MtrunA17_Chr3g0121931 27.313 670 395 23 48 655 81 720 1.67e-47 178
Msa0712260 MtrunA17_Chr8g0377991 26.244 663 413 19 48 655 83 724 1.39e-42 164
Msa0712260 MtrunA17_Chr3g0121951 26.577 666 402 24 48 655 79 715 5.21e-42 162
Msa0712260 MtrunA17_Chr1g0180541 25.905 359 199 14 193 537 158 463 1.35e-23 105
Msa0712260 MtrunA17_Chr5g0395431 28.270 474 234 21 77 523 95 489 1.63e-23 105
Msa0712260 MtrunA17_Chr2g0327341 28.814 354 177 16 199 537 161 454 4.73e-21 97.4
Msa0712260 MtrunA17_Chr1g0180551 24.007 579 345 24 68 631 116 614 1.39e-20 96.3
Msa0712260 MtrunA17_Chr6g0471921 23.851 457 272 14 74 522 28 416 2.02e-20 95.1
Msa0712260 MtrunA17_Chr4g0028411 24.945 453 247 17 109 537 74 457 5.34e-20 94.0
Msa0712260 MtrunA17_Chr4g0039791 25.163 461 271 14 87 537 80 476 8.54e-20 93.6
Msa0712260 MtrunA17_Chr5g0409791 27.711 332 185 10 214 537 199 483 5.61e-19 90.9
Msa0712260 MtrunA17_Chr3g0102411 26.257 358 205 14 201 549 161 468 1.79e-17 86.3
Msa0712260 MtrunA17_Chr5g0409771 26.076 395 220 15 179 551 140 484 5.44e-17 84.7
Msa0712260 MtrunA17_Chr8g0388091 45.263 95 49 3 1 93 1 94 6.20e-17 77.4
Msa0712260 MtrunA17_Chr3g0116271 27.796 313 169 12 218 522 196 459 2.31e-16 82.8
Msa0712260 MtrunA17_Chr4g0000461 26.593 361 198 14 202 547 161 469 4.22e-16 82.0
Msa0712260 MtrunA17_Chr1g0197391 27.217 327 182 13 216 537 206 481 5.19e-16 81.6
Msa0712260 MtrunA17_Chr8g0370731 25.223 448 220 19 200 601 114 492 6.01e-16 81.3
Msa0712260 MtrunA17_Chr3g0116251 25.260 384 221 15 151 522 128 457 9.26e-16 80.9
Msa0712260 MtrunA17_Chr4g0072561 23.755 522 307 23 27 535 18 461 3.18e-15 79.0
Msa0712260 MtrunA17_Chr3g0109731 21.183 524 290 18 80 564 41 480 1.14e-13 74.3
Msa0712260 MtrunA17_Chr1g0157401 22.727 308 183 9 221 522 203 461 1.73e-13 73.6
Msa0712260 MtrunA17_Chr5g0396331 24.672 381 193 16 214 574 170 476 3.56e-13 72.4
Msa0712260 MtrunA17_Chr1g0186071 33.766 154 97 5 386 537 321 471 6.84e-13 71.6
Msa0712260 MtrunA17_Chr5g0406681 21.980 505 306 19 68 551 60 497 8.13e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0712260 AT4G23850.1 76.067 656 157 0 3 658 4 659 0.0 1072
Msa0712260 AT4G11030.1 75.420 655 161 0 2 656 3 657 0.0 1060
Msa0712260 AT1G64400.1 73.018 656 176 1 1 655 1 656 0.0 1021
Msa0712260 AT1G49430.1 53.799 658 302 2 7 662 8 665 0.0 763
Msa0712260 AT2G47240.1 48.620 652 335 0 4 655 2 653 0.0 670
Msa0712260 AT2G47240.2 48.620 652 335 0 4 655 2 653 0.0 670
Msa0712260 AT2G47240.3 48.620 652 335 0 4 655 2 653 0.0 670
Msa0712260 AT2G47240.4 49.327 594 301 0 62 655 1 594 0.0 618
Msa0712260 AT1G49430.2 51.313 495 240 1 7 500 8 502 0.0 554
Msa0712260 AT5G27600.1 40.806 620 354 7 38 654 78 687 1.53e-156 468
Msa0712260 AT3G05970.1 41.640 622 348 8 38 655 78 688 9.04e-153 458
Msa0712260 AT2G04350.2 32.669 652 395 13 39 654 76 719 1.06e-106 339
Msa0712260 AT2G04350.1 32.669 652 395 13 39 654 76 719 1.06e-106 339
Msa0712260 AT1G77590.1 32.243 642 387 14 48 654 62 690 1.25e-96 312
Msa0712260 AT1G77590.2 34.054 555 332 12 121 654 3 544 1.35e-87 284
Msa0712260 AT3G23790.1 26.687 667 401 25 48 655 85 722 3.25e-43 166
Msa0712260 AT4G14070.1 26.126 666 393 24 48 654 101 726 6.91e-40 156
Msa0712260 AT4G19010.1 29.755 326 177 10 217 537 199 477 9.27e-22 100
Msa0712260 AT2G47245.1 50.000 76 38 0 22 97 53 128 7.91e-21 89.4
Msa0712260 AT3G21230.1 28.249 354 201 13 201 549 190 495 6.37e-19 91.3
Msa0712260 AT3G21230.3 28.249 354 201 13 201 549 190 495 7.54e-19 90.9
Msa0712260 AT3G21230.2 28.249 354 201 13 201 549 190 495 8.25e-19 90.5
Msa0712260 AT3G16170.1 23.735 514 306 16 99 592 124 571 1.06e-18 90.9
Msa0712260 AT4G05160.1 27.378 347 191 14 199 537 166 459 1.59e-18 90.1
Msa0712260 AT1G66120.1 24.172 513 287 19 80 564 41 479 2.29e-18 89.7
Msa0712260 AT3G21240.2 27.635 351 184 15 202 537 174 469 5.39e-18 87.8
Msa0712260 AT3G21240.3 27.635 351 184 15 202 537 174 469 5.39e-18 87.8
Msa0712260 AT3G21240.1 27.635 351 184 15 202 537 174 469 6.38e-18 88.2
Msa0712260 AT3G16910.1 22.017 595 348 20 73 623 43 565 1.68e-17 86.7
Msa0712260 AT1G65890.1 23.282 524 293 16 73 565 35 480 2.87e-17 86.3
Msa0712260 AT1G65060.1 24.590 488 259 17 77 537 74 479 2.91e-17 85.9
Msa0712260 AT1G65060.2 24.473 474 250 16 77 523 74 466 6.15e-17 84.7
Msa0712260 AT1G20500.1 26.367 311 165 13 221 522 196 451 1.28e-14 77.8
Msa0712260 AT1G51680.1 27.841 352 177 14 223 556 203 495 3.86e-14 76.3
Msa0712260 AT1G51680.3 27.841 352 177 14 223 556 203 495 4.30e-14 75.9
Msa0712260 AT1G51680.2 28.701 331 159 14 223 535 203 474 5.57e-14 75.5
Msa0712260 AT1G20510.1 23.131 428 243 14 218 631 182 537 2.75e-13 73.6
Msa0712260 AT1G20510.2 25.152 330 185 11 218 537 182 459 4.62e-13 72.4
Msa0712260 AT1G20510.3 25.079 315 175 11 218 522 182 445 1.46e-12 70.9
Msa0712260 AT1G62940.1 24.022 358 214 12 201 549 159 467 2.59e-11 67.0

Find 207 sgRNAs with CRISPR-Local

Find 747 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAGTTAACGATGGTTTA+AGG 0.176945 5_1:-4092334 None:intergenic
ACACTTACTCTTGAGATATT+TGG 0.186822 5_1:-4097477 None:intergenic
CTACCAAGCATAGGATTATT+TGG 0.199402 5_1:-4093524 None:intergenic
ATTCTCTCTGTGGAGATTCT+AGG 0.235210 5_1:+4101836 Msa0712260:CDS
AAGCAAGAAGTTGAAAAGTT+TGG 0.248242 5_1:+4097607 Msa0712260:CDS
TGACCCAGTTCCATTTGATA+TGG 0.272583 5_1:+4102676 Msa0712260:CDS
TTCCTGGTCTTGATAGTTGC+TGG 0.272872 5_1:+4092560 Msa0712260:CDS
AGCTGGTGTGAAGCGGTTAT+TGG 0.284574 5_1:+4098182 Msa0712260:CDS
CGATCTATCGATGAGAAAAT+TGG 0.285165 5_1:-4092412 None:intergenic
GTTCATTTATTATTTCCTTT+TGG 0.286679 5_1:+4103530 Msa0712260:three_prime_UTR
TTGAGATATTTGGTTGCATT+TGG 0.288948 5_1:-4097467 None:intergenic
ATGTTCAAGTGCTGGTTTGC+TGG 0.291698 5_1:-4101779 None:intergenic
TATTAGGTGAAACAAGGTTT+AGG 0.296760 5_1:+4100107 Msa0712260:intron
TTGACACAGAAAATTTCTTC+TGG 0.306587 5_1:+4099682 Msa0712260:CDS
ATTCGTTACAAACATTTGTT+AGG 0.309818 5_1:+4103665 Msa0712260:three_prime_UTR
AGGGCATCGTAACCCATTTC+AGG 0.320553 5_1:-4100676 None:intergenic
CTCCTCTTGGTGTGCTTGCA+AGG 0.324542 5_1:-4100696 None:intergenic
CATAATCCACTCTGCAGAAT+TGG 0.331511 5_1:-4094303 None:intergenic
GCTTGAATATATTCTTCTTC+CGG 0.342080 5_1:-4100964 None:intergenic
GTTTAAGGGAAAGGGAATAT+TGG 0.343274 5_1:-4092319 None:intergenic
CCAAGCATATCTAGTTCATT+TGG 0.343611 5_1:-4100604 None:intergenic
TTGGATTGGCAATATATTCA+TGG 0.344016 5_1:+4097626 Msa0712260:CDS
TGCAGTTAACGATGGTTTAA+GGG 0.345081 5_1:-4092333 None:intergenic
ATATGGCATGGTGGTTCAAT+AGG 0.345107 5_1:+4098500 Msa0712260:CDS
ATTAGGTGAAACAAGGTTTA+GGG 0.346674 5_1:+4100108 Msa0712260:intron
CTGTCTCAGATATGGGTTTA+CGG 0.347047 5_1:+4101718 Msa0712260:intron
ATAATCTTCATACTTCCATT+AGG 0.361330 5_1:-4100938 None:intergenic
ATGGGATATAATAAATTCTA+TGG 0.363050 5_1:-4097265 None:intergenic
CTCTCGCACACATCTTTGAT+AGG 0.368081 5_1:+4098459 Msa0712260:CDS
GAACATTGGGCAGAAGAAAA+TGG 0.369465 5_1:+4101796 Msa0712260:CDS
CCTGGAATCTGTTCCTGAAA+TGG 0.379308 5_1:+4100663 Msa0712260:CDS
ACAAAAGAGGTTCTGGTTGA+TGG 0.379543 5_1:+4100775 Msa0712260:CDS
GCTCATGTCATACAAGGATA+TGG 0.382316 5_1:+4100209 Msa0712260:CDS
TCTATCCGCAGCTGTGGTTA+TGG 0.382635 5_1:+4093750 Msa0712260:CDS
GTTCAATAGGCTTCTGGCGT+GGG 0.383925 5_1:+4098513 Msa0712260:CDS
TTGGATATCAATACTCCCTT+GGG 0.390960 5_1:-4098138 None:intergenic
AGTTGAATAATGTCTTCTTC+AGG 0.393797 5_1:-4099711 None:intergenic
CCATTTCAGGAACAGATTCC+AGG 0.395196 5_1:-4100663 None:intergenic
CTTGAAGAGCTCTCAAAGAT+TGG 0.398371 5_1:+4101874 Msa0712260:CDS
GCATGTGGAAAGTTACTTAC+GGG 0.401281 5_1:+4100175 Msa0712260:CDS
GGTGTAAAATGTGGTATTTA+TGG 0.401519 5_1:+4094278 Msa0712260:CDS
ATACCTAAGGTATCATATAA+AGG 0.402549 5_1:-4096272 None:intergenic
AGAGGAGAAATTTGTGTAAA+GGG 0.402798 5_1:+4100712 Msa0712260:CDS
AGACCTCACAAAAGAGGTTC+TGG 0.403618 5_1:+4100768 Msa0712260:CDS
CCGTGCCTGAGAAATGCTTT+TGG 0.403835 5_1:+4103450 Msa0712260:exon
GGCCTCTTCTTCTTATATGT+TGG 0.405195 5_1:-4102716 None:intergenic
AATTATTAATTGAAGATCTC+GGG 0.407840 5_1:+4099433 Msa0712260:CDS
TCTGCCCAATGTTCAAGTGC+TGG 0.409379 5_1:-4101787 None:intergenic
TGTTCAAGTGCTGGTTTGCT+GGG 0.410438 5_1:-4101778 None:intergenic
TTTACACAAATTTCTCCTCT+TGG 0.413969 5_1:-4100709 None:intergenic
TCTTATATGTTGGAGTGATA+AGG 0.421514 5_1:-4102706 None:intergenic
TATACAGCAATTGTGAGCTT+CGG 0.424153 5_1:+4097565 Msa0712260:intron
TCCTCTTGAAGGTTTATCTT+CGG 0.424838 5_1:-4092491 None:intergenic
TCAGTTGCTGAAATACTATC+AGG 0.425338 5_1:+4102739 Msa0712260:CDS
GTTCCTTTATATGATACCTT+AGG 0.425559 5_1:+4096269 Msa0712260:CDS
AACGTGCTCAGCGTAATTGC+TGG 0.425885 5_1:-4092230 None:intergenic
TCCTCTTGGTGTGCTTGCAA+GGG 0.426219 5_1:-4100695 None:intergenic
CGTTCCATATCAAATGGAAC+TGG 0.429994 5_1:-4102680 None:intergenic
GAGGGTAATAATACTCTCAT+TGG 0.431912 5_1:-4098157 None:intergenic
TCCAGGCACGCATCCACATT+TGG 0.432219 5_1:-4100646 None:intergenic
CAAAAGCATTTCTCAGGCAC+GGG 0.436307 5_1:-4103449 None:intergenic
AAATTATTAATTGAAGATCT+CGG 0.439867 5_1:+4099432 Msa0712260:CDS
GCAAACCAGCACTTGAACAT+TGG 0.440808 5_1:+4101782 Msa0712260:CDS
ATTGGAGAGTGGCAACCTAA+TGG 0.442586 5_1:+4100923 Msa0712260:CDS
CGATACGCAGGTCCTCTTGA+AGG 0.448610 5_1:-4092502 None:intergenic
TCATTGAGGAGACATTTATA+TGG 0.450467 5_1:+4098483 Msa0712260:CDS
GAAAACATCAATAACCTGTA+TGG 0.451975 5_1:-4100804 None:intergenic
ATGGTGGTTCAATAGGCTTC+TGG 0.452304 5_1:+4098507 Msa0712260:CDS
CTGGAATCTGTTCCTGAAAT+GGG 0.452978 5_1:+4100664 Msa0712260:CDS
ATTGGATATCAATACTCCCT+TGG 0.463258 5_1:-4098139 None:intergenic
TCGGAGGTGACGAAAACAAT+TGG 0.464831 5_1:-4103638 None:intergenic
TCCTGGTCTTGATAGTTGCT+GGG 0.464933 5_1:+4092561 Msa0712260:CDS
AGAAGTTGAAAAGTTTGGAT+TGG 0.465697 5_1:+4097612 Msa0712260:CDS
ACCAAATGTGGATGCGTGCC+TGG 0.469468 5_1:+4100645 Msa0712260:CDS
CAAACCAGCACTTGAACATT+GGG 0.469596 5_1:+4101783 Msa0712260:CDS
AAGAGGAGAAATTTGTGTAA+AGG 0.469608 5_1:+4100711 Msa0712260:CDS
CAGCTCCAAAAGCATTTCTC+AGG 0.470640 5_1:-4103455 None:intergenic
AGGTCACGTTCCATATCAAA+TGG 0.471049 5_1:-4102686 None:intergenic
TGACAAAGTTGTGTTCGATA+AGG 0.474319 5_1:+4099995 Msa0712260:CDS
TAACGATGGTTTAAGGGAAA+GGG 0.475547 5_1:-4092327 None:intergenic
GTATCTTTCACAGTTGAGTA+AGG 0.477553 5_1:-4103597 None:intergenic
GGTTCAATAGGCTTCTGGCG+TGG 0.482242 5_1:+4098512 Msa0712260:CDS
TGCATGTGGAAAGTTACTTA+CGG 0.482991 5_1:+4100174 Msa0712260:CDS
CTTGGCTATAAATATTCTCC+AGG 0.484171 5_1:-4101018 None:intergenic
TTTATTAAATTAGGTTTGGT+TGG 0.484512 5_1:-4092192 None:intergenic
ACATATATGACTTAGGTTCT+GGG 0.485223 5_1:+4097241 Msa0712260:intron
CAACTATCAAGACCAGGAAT+AGG 0.487174 5_1:-4092556 None:intergenic
GTTGATGGATGGTTCCATAC+AGG 0.491965 5_1:+4100790 Msa0712260:CDS
ATATGTTGCCGTTGAAAACC+TGG 0.492865 5_1:+4101000 Msa0712260:CDS
ACCGCTTCACACCAGCTAAG+AGG 0.495767 5_1:-4098176 None:intergenic
CAGATTCAACAGAAGTAACT+TGG 0.496861 5_1:-4101036 None:intergenic
ATGTATACTAGCGGAACTAC+TGG 0.501317 5_1:+4098111 Msa0712260:CDS
TATCCAAATAATCCTATGCT+TGG 0.502151 5_1:+4093521 Msa0712260:CDS
TTCTCTCTGTGGAGATTCTA+GGG 0.505172 5_1:+4101837 Msa0712260:CDS
ATCGATGACATGTACAAAAG+TGG 0.505651 5_1:+4103418 Msa0712260:CDS
CAAATGGAACTGGGTCAAGA+TGG 0.505692 5_1:-4102670 None:intergenic
AGTATTATTACCCTCTTAGC+TGG 0.509023 5_1:+4098165 Msa0712260:CDS
ATGGAGTGAGCCAGAGTGTA+GGG 0.511938 5_1:-4092277 None:intergenic
GCTTGGTAGCCGAGAGATTG+TGG 0.513968 5_1:+4093538 Msa0712260:CDS
GTTTATTCAACAGGGGACAT+TGG 0.514474 5_1:+4100905 Msa0712260:intron
CCTTCCCGTCCACAATCTCT+CGG 0.515336 5_1:-4093547 None:intergenic
GCCAGAGTGTAGGGTAGGGT+AGG 0.515839 5_1:-4092268 None:intergenic
TGAGACAAAGGTTCCCGCAC+AGG 0.520727 5_1:-4100578 None:intergenic
CAAAGATGTGTGCGAGAGGA+AGG 0.521267 5_1:-4098454 None:intergenic
CCAAATGAACTAGATATGCT+TGG 0.522719 5_1:+4100604 Msa0712260:CDS
CATCTTTGATAGGGTCATTG+AGG 0.523014 5_1:+4098469 Msa0712260:CDS
CTCCAACATATAAGAAGAAG+AGG 0.526676 5_1:+4102714 Msa0712260:CDS
AAAGATTGGAAAGGAAAAGA+AGG 0.529034 5_1:+4101888 Msa0712260:CDS
TTAACGATGGTTTAAGGGAA+AGG 0.529583 5_1:-4092328 None:intergenic
TTCTTTACAGTTGACTGAGA+AGG 0.529680 5_1:+4098415 Msa0712260:intron
AACACAACTTTGTCAAGAAG+TGG 0.532570 5_1:-4099987 None:intergenic
ATGTTTGTAACGAATATTGT+CGG 0.533934 5_1:-4103657 None:intergenic
AGAAAATTGGTTAAGTAAAG+CGG 0.534612 5_1:-4092399 None:intergenic
TTGCAGGCTTGCAATGCTCA+TGG 0.535649 5_1:+4096236 Msa0712260:intron
ATGTACAGACAGTAACCAAA+AGG 0.537206 5_1:-4103545 None:intergenic
CCAAAAGCATTTCTCAGGCA+CGG 0.540297 5_1:-4103450 None:intergenic
ACGTGAAGACCTCACAAAAG+AGG 0.543040 5_1:+4100762 Msa0712260:CDS
GGTACCGCACAGAAAATAGT+TGG 0.545593 5_1:-4099465 None:intergenic
TTCATTTGGTAATGAGACAA+AGG 0.547604 5_1:-4100590 None:intergenic
CCAGAGTGTAGGGTAGGGTA+GGG 0.548886 5_1:-4092267 None:intergenic
AAGTTGAATAACATGAAGAA+AGG 0.555049 5_1:+4099942 Msa0712260:CDS
GAAGTATGAAGATTATTGAC+CGG 0.555526 5_1:+4100945 Msa0712260:CDS
CCGCTTCACACCAGCTAAGA+GGG 0.556193 5_1:-4098175 None:intergenic
TGCAGAGTGGATTATGAGCA+TGG 0.556427 5_1:+4094310 Msa0712260:CDS
CTATCAAGACCAGGAATAGG+AGG 0.557455 5_1:-4092553 None:intergenic
TCTCGCACACATCTTTGATA+GGG 0.557834 5_1:+4098460 Msa0712260:CDS
AAGAGGTTCTGGTTGATGGA+TGG 0.558942 5_1:+4100779 Msa0712260:CDS
CCCTCTTAGCTGGTGTGAAG+CGG 0.559254 5_1:+4098175 Msa0712260:CDS
CTAGATATGCTTGGAACAGT+GGG 0.559533 5_1:+4100613 Msa0712260:CDS
CTTTCCACATGCAAGGATAG+AGG 0.562273 5_1:-4100164 None:intergenic
ACACAGAAAATTTCTTCTGG+AGG 0.567816 5_1:+4099685 Msa0712260:CDS
GTGAGCCAGAGTGTAGGGTA+GGG 0.568991 5_1:-4092272 None:intergenic
TACATATGATTATGAAGAGA+CGG 0.570345 5_1:+4103563 Msa0712260:three_prime_UTR
AGTGAGCCAGAGTGTAGGGT+AGG 0.572131 5_1:-4092273 None:intergenic
GAGGAGACATTTATATGGCA+TGG 0.573299 5_1:+4098488 Msa0712260:CDS
CGGAACTACTGGTGACCCCA+AGG 0.575566 5_1:+4098122 Msa0712260:CDS
CACGCATCCACATTTGGTAC+AGG 0.577541 5_1:-4100640 None:intergenic
CCGAGAGATTGTGGACGGGA+AGG 0.579412 5_1:+4093547 Msa0712260:CDS
TATGACATGGTGATCAAAGT+CGG 0.580833 5_1:+4093723 Msa0712260:CDS
TTCCTTAGCAAAATTAACAA+TGG 0.581731 5_1:+4103707 Msa0712260:three_prime_UTR
GATGGAGTGAGCCAGAGTGT+AGG 0.586255 5_1:-4092278 None:intergenic
TCAAGACCAGGAATAGGAGG+AGG 0.586861 5_1:-4092550 None:intergenic
TGCAATTGAGACCTCTGCAT+GGG 0.590133 5_1:-4097283 None:intergenic
GGATATGTTTGACAGTTGAA+AGG 0.594993 5_1:+4102626 Msa0712260:intron
AACAGCATGGCAAGTACAAG+TGG 0.596150 5_1:+4093682 Msa0712260:intron
ACTAGATATGCTTGGAACAG+TGG 0.597796 5_1:+4100612 Msa0712260:CDS
AGGAAATAATAAATGAACAA+AGG 0.599532 5_1:-4103525 None:intergenic
GCAGAAAAGATTCATCATTG+AGG 0.599840 5_1:+4092447 Msa0712260:CDS
ACTTGTGCTCATGTCATACA+AGG 0.602081 5_1:+4100203 Msa0712260:CDS
CCCTACCCTACCCTACACTC+TGG 0.606435 5_1:+4092267 Msa0712260:five_prime_UTR
TAAGTAACTTTCCACATGCA+AGG 0.606789 5_1:-4100171 None:intergenic
CATATATGACTTAGGTTCTG+GGG 0.607084 5_1:+4097242 Msa0712260:intron
AGCAATTGTGAGCTTCGGAA+AGG 0.607509 5_1:+4097570 Msa0712260:intron
ATCGATAGATCGTTGAGCCA+TGG 0.612297 5_1:+4092423 Msa0712260:exon
ATTATTAATTGAAGATCTCG+GGG 0.613894 5_1:+4099434 Msa0712260:CDS
ACCGAAGATAAACCTTCAAG+AGG 0.614180 5_1:+4092490 Msa0712260:CDS
GTTCAAGTGCTGGTTTGCTG+GGG 0.614592 5_1:-4101777 None:intergenic
TTCAATAGGCTTCTGGCGTG+GGG 0.616697 5_1:+4098514 Msa0712260:CDS
ACTTTAAATGCAGTTAACGA+TGG 0.617615 5_1:-4092341 None:intergenic
TAGGTGAAACAAGGTTTAGG+GGG 0.618879 5_1:+4100110 Msa0712260:intron
GGTAGCCGAGAGATTGTGGA+CGG 0.618986 5_1:+4093542 Msa0712260:CDS
GGGTCCTCCTGTACCAAATG+TGG 0.620020 5_1:+4100633 Msa0712260:CDS
ATGCAATTGAGACCTCTGCA+TGG 0.620150 5_1:-4097284 None:intergenic
TTAGGTGAAACAAGGTTTAG+GGG 0.621786 5_1:+4100109 Msa0712260:intron
GTTAACAACAGCAACAAGGA+AGG 0.622901 5_1:-4101755 None:intergenic
AATATATTCAAGCTTTCACA+AGG 0.623679 5_1:+4100974 Msa0712260:CDS
GGTCTGACTGAAACCTGTGC+GGG 0.625404 5_1:+4100565 Msa0712260:intron
ATCTCTCGGCTACCAAGCAT+AGG 0.625583 5_1:-4093533 None:intergenic
ATTATTTGGATATTTCTCAA+CGG 0.628492 5_1:-4093510 None:intergenic
GCGAAGATGCTACGATACGC+AGG 0.628778 5_1:-4092514 None:intergenic
AGAGCTCTCAAAGATTGGAA+AGG 0.632260 5_1:+4101879 Msa0712260:CDS
ATTTATTATATCCCATGCAG+AGG 0.633133 5_1:+4097272 Msa0712260:CDS
ACAGAGAGAATTGAAGTCCA+CGG 0.634161 5_1:-4101824 None:intergenic
GCCCTTGCAAGCACACCAAG+AGG 0.634649 5_1:+4100694 Msa0712260:CDS
GGAAATTCTATCCGCAGCTG+TGG 0.634848 5_1:+4093744 Msa0712260:CDS
TTTGTAGTACCCCGAAAACA+AGG 0.639552 5_1:-4100740 None:intergenic
AGTACACTCTATCAAGTACA+CGG 0.639649 5_1:-4099488 None:intergenic
GCATCCACATTTGGTACAGG+AGG 0.639658 5_1:-4100637 None:intergenic
GAAGTGGAGATGCTGCTGCA+TGG 0.643374 5_1:-4099971 None:intergenic
CTATCAAAGATGTGTGCGAG+AGG 0.643677 5_1:-4098458 None:intergenic
AGCACCTCTATCCTTGCATG+TGG 0.644253 5_1:+4100160 Msa0712260:CDS
GTACTTGATAGAGTGTACTC+AGG 0.645216 5_1:+4099492 Msa0712260:CDS
TGATAGTATTTCAGCAACTG+AGG 0.648487 5_1:-4102737 None:intergenic
GGAACTACTGGTGACCCCAA+GGG 0.650731 5_1:+4098123 Msa0712260:CDS
GTACACTCTATCAAGTACAC+GGG 0.650966 5_1:-4099487 None:intergenic
TCCCAGCAACTATCAAGACC+AGG 0.653688 5_1:-4092562 None:intergenic
GTGGACTTCAATTCTCTCTG+TGG 0.654530 5_1:+4101826 Msa0712260:CDS
AAAAGCATTTCTCAGGCACG+GGG 0.655886 5_1:-4103448 None:intergenic
ATGGTGCCAATTCTGCAGAG+TGG 0.660085 5_1:+4094297 Msa0712260:CDS
AATAAATTATCTGCATGACA+TGG 0.660661 5_1:-4103481 None:intergenic
GTTCCATATCAAATGGAACT+GGG 0.663113 5_1:-4102679 None:intergenic
GTAGCCGAGAGATTGTGGAC+GGG 0.663330 5_1:+4093543 Msa0712260:CDS
CAACAGGGGACATTGGAGAG+TGG 0.668033 5_1:+4100912 Msa0712260:intron
TTTGTAACGAATATTGTCGG+AGG 0.671371 5_1:-4103654 None:intergenic
AGGTCTGACTGAAACCTGTG+CGG 0.671990 5_1:+4100564 Msa0712260:intron
TGGGGTTAACAACAGCAACA+AGG 0.674167 5_1:-4101759 None:intergenic
AGAAGAAAATGGTATATCCG+TGG 0.681052 5_1:+4101807 Msa0712260:CDS
GAGACATTTATATGGCATGG+TGG 0.693735 5_1:+4098491 Msa0712260:CDS
TGTACAATAATGTATACTAG+CGG 0.700165 5_1:+4098102 Msa0712260:CDS
CTTCTCCATAACCACAGCTG+CGG 0.713750 5_1:-4093755 None:intergenic
TGGATATCAATACTCCCTTG+GGG 0.718015 5_1:-4098137 None:intergenic
TTACAAAGAAGTATATGACA+TGG 0.723910 5_1:+4093710 Msa0712260:CDS
GGTTTACAGGGTGTAAAATG+TGG 0.725875 5_1:+4094269 Msa0712260:intron
AGAAGAAAAGAAGATACCTG+AGG 0.728782 5_1:+4097311 Msa0712260:CDS
TGTGGAAAGTTACTTACGGG+TGG 0.735294 5_1:+4100178 Msa0712260:CDS
TACACTCTATCAAGTACACG+GGG 0.758287 5_1:-4099486 None:intergenic
AGAGTGGATTATGAGCATGG+AGG 0.803600 5_1:+4094313 Msa0712260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAAAAAAAAAAAAAAA+AGG + chr5_1:4099277-4099296 Msa0712260:intron 0.0%
!! ATAAATAAGATTAAAATCTA+AGG + chr5_1:4093304-4093323 Msa0712260:intron 10.0%
!! TAAATAAGATTAAAATCTAA+GGG + chr5_1:4093305-4093324 Msa0712260:intron 10.0%
!! ATATAAATAATTATTACATG+CGG - chr5_1:4094214-4094233 None:intergenic 10.0%
!! TTTAAACAAATATTAAGAAA+TGG - chr5_1:4095058-4095077 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTCCTTTT+CGG + chr5_1:4095929-4095948 Msa0712260:intron 10.0%
!! ATTTCTTATTAATTTATTGT+TGG + chr5_1:4097354-4097373 Msa0712260:intron 10.0%
!! TTTCTTATTAATTTATTGTT+GGG + chr5_1:4097355-4097374 Msa0712260:intron 10.0%
!! AAAGTTATTAAAATAAAGAT+AGG - chr5_1:4097428-4097447 None:intergenic 10.0%
!!! TAGTTTTAATTTTCTTAATT+AGG + chr5_1:4099840-4099859 Msa0712260:intron 10.0%
!! TATATAGATACTATTTAAAT+TGG + chr5_1:4100838-4100857 Msa0712260:intron 10.0%
!! TAATGTAAATTATACAAATA+TGG - chr5_1:4101504-4101523 None:intergenic 10.0%
!! AAAATTTCACATTAATTTAA+AGG + chr5_1:4101988-4102007 Msa0712260:intron 10.0%
!! AAATTTCACATTAATTTAAA+GGG + chr5_1:4101989-4102008 Msa0712260:intron 10.0%
!!! TTGTTTTATTAAATTAGGTT+TGG - chr5_1:4092199-4092218 None:intergenic 15.0%
!!! TACTGTTGTTTTATTAAATT+AGG - chr5_1:4092204-4092223 None:intergenic 15.0%
!!! TGAATATTGGATTTAATTTT+TGG + chr5_1:4092963-4092982 Msa0712260:intron 15.0%
!!! CTTAAGCAATTTTTTTTTTT+TGG - chr5_1:4094120-4094139 None:intergenic 15.0%
!!! ATTATTTTTCATGAAGTTTT+AGG + chr5_1:4095205-4095224 Msa0712260:intron 15.0%
!!! ATAATTTTTTCACATATTCA+AGG - chr5_1:4095465-4095484 None:intergenic 15.0%
!!! TCTATTTTTTTAAGATACAA+GGG + chr5_1:4095539-4095558 Msa0712260:intron 15.0%
!! ATTGTTTAATTAAAAACTAG+AGG + chr5_1:4095567-4095586 Msa0712260:intron 15.0%
!! TTGTTTAATTAAAAACTAGA+GGG + chr5_1:4095568-4095587 Msa0712260:intron 15.0%
!! AAATATATTCAAATAATTGC+AGG + chr5_1:4096220-4096239 Msa0712260:intron 15.0%
!!! TATTGAATGAATCTAAAATT+TGG - chr5_1:4096511-4096530 None:intergenic 15.0%
!!! TTTTTTTTATAAAATCACGA+GGG - chr5_1:4096737-4096756 None:intergenic 15.0%
!!! TTTTTTTTTATAAAATCACG+AGG - chr5_1:4096738-4096757 None:intergenic 15.0%
!! ATTAAAAATCAAATTAGGAA+TGG - chr5_1:4098023-4098042 None:intergenic 15.0%
!! CAAGTATTAAAAATCAAATT+AGG - chr5_1:4098028-4098047 None:intergenic 15.0%
!!! TTTAGCTCATTTTTAATAAA+TGG - chr5_1:4098751-4098770 None:intergenic 15.0%
!!! GATTTATAAAATTTTGAAGT+TGG - chr5_1:4098982-4099001 None:intergenic 15.0%
!!! CAAAATTTGTTAAATTGAAA+GGG - chr5_1:4099061-4099080 None:intergenic 15.0%
!!! CTTTCAATTTAACAAATTTT+GGG + chr5_1:4099060-4099079 Msa0712260:intron 15.0%
!! AAATTATTAATTGAAGATCT+CGG + chr5_1:4099432-4099451 Msa0712260:CDS 15.0%
!!! TATTTTTTTCAACTTCATAT+GGG - chr5_1:4101119-4101138 None:intergenic 15.0%
!!! ATATTTTTTTCAACTTCATA+TGG - chr5_1:4101120-4101139 None:intergenic 15.0%
!!! AGATATTAGATTTTCAAAAT+TGG - chr5_1:4101234-4101253 None:intergenic 15.0%
!!! AGTTTGATAATTTTCAATTA+CGG + chr5_1:4101261-4101280 Msa0712260:intron 15.0%
!! AATTTCACATTAATTTAAAG+GGG + chr5_1:4101990-4102009 Msa0712260:intron 15.0%
!!! AATTATTTCTGCTTTATTAT+AGG + chr5_1:4102803-4102822 Msa0712260:intron 15.0%
!!! TTTATTAAATTAGGTTTGGT+TGG - chr5_1:4092195-4092214 None:intergenic 20.0%
!!! GGAAAATGAGAAATTTTAAA+TGG - chr5_1:4092381-4092400 None:intergenic 20.0%
!! TTGTAATAAATAGCTTATCA+TGG + chr5_1:4093133-4093152 Msa0712260:intron 20.0%
!!! TTATTGGCTAACATTAATTT+CGG - chr5_1:4093219-4093238 None:intergenic 20.0%
!! TAACAGAATTCTTAGAAATA+GGG - chr5_1:4093395-4093414 None:intergenic 20.0%
!! ATAACAGAATTCTTAGAAAT+AGG - chr5_1:4093396-4093415 None:intergenic 20.0%
!! ATTATTTGGATATTTCTCAA+CGG - chr5_1:4093513-4093532 None:intergenic 20.0%
!! AAATAACCAAAAACAAAACA+AGG - chr5_1:4093821-4093840 None:intergenic 20.0%
!! ATGTATGATATTCAAATTCT+TGG + chr5_1:4093858-4093877 Msa0712260:intron 20.0%
!! GTTCAAAGAAATTAAATAAG+AGG - chr5_1:4093993-4094012 None:intergenic 20.0%
!! CAAATTAATATCATGGAAAT+GGG - chr5_1:4094860-4094879 None:intergenic 20.0%
!! ACAAATTAATATCATGGAAA+TGG - chr5_1:4094861-4094880 None:intergenic 20.0%
!!! TTTCCATGATATTAATTTGT+AGG + chr5_1:4094861-4094880 Msa0712260:intron 20.0%
!!! TTCCATGATATTAATTTGTA+GGG + chr5_1:4094862-4094881 Msa0712260:intron 20.0%
!! AATCCATACATTTATCTATA+TGG + chr5_1:4095162-4095181 Msa0712260:intron 20.0%
!! TTTCCATATAGATAAATGTA+TGG - chr5_1:4095168-4095187 None:intergenic 20.0%
!! ATTGTTTGCAAAAATAAAAG+TGG - chr5_1:4095403-4095422 None:intergenic 20.0%
!!! ACTTTTATTTTTGCAAACAA+TGG + chr5_1:4095402-4095421 Msa0712260:intron 20.0%
!!! GTCTATTTTTTTAAGATACA+AGG + chr5_1:4095538-4095557 Msa0712260:intron 20.0%
!! TGTTTAATTAAAAACTAGAG+GGG + chr5_1:4095569-4095588 Msa0712260:intron 20.0%
!! ACATAGAAATAAATAAGAAC+AGG - chr5_1:4095962-4095981 None:intergenic 20.0%
!! AAAACTTAATAACAATTGAG+TGG - chr5_1:4096199-4096218 None:intergenic 20.0%
!!! TGTAAGTTTTTAGCATAAAT+TGG - chr5_1:4096460-4096479 None:intergenic 20.0%
!!! TATTGAATGAATCTAAAACA+TGG + chr5_1:4096572-4096591 Msa0712260:intron 20.0%
!! GGATAAAAACAAAAATATAC+CGG - chr5_1:4096716-4096735 None:intergenic 20.0%
!!! AGATAGTTTATCACAATTTT+AGG - chr5_1:4096853-4096872 None:intergenic 20.0%
!!! TTCATTATCAGTATTTTGTT+AGG + chr5_1:4097118-4097137 Msa0712260:intron 20.0%
!!! ATTAGAATGGCATTTATTTT+CGG - chr5_1:4097160-4097179 None:intergenic 20.0%
!! TTTGAATTTCCAATTATCAT+TGG + chr5_1:4097203-4097222 Msa0712260:intron 20.0%
!! ATGGGATATAATAAATTCTA+TGG - chr5_1:4097268-4097287 None:intergenic 20.0%
!! TTATTAATTTATTGTTGGGA+AGG + chr5_1:4097359-4097378 Msa0712260:intron 20.0%
!! CAATTCAAGTAAGAAAAATA+AGG + chr5_1:4097848-4097867 Msa0712260:intron 20.0%
!!! ATGAAAAGAAATTTTGCATA+GGG - chr5_1:4098272-4098291 None:intergenic 20.0%
!!! AATGAAAAGAAATTTTGCAT+AGG - chr5_1:4098273-4098292 None:intergenic 20.0%
!!! GGATATAATTTTTTTTGTTC+AGG + chr5_1:4098330-4098349 Msa0712260:intron 20.0%
!! TCTATATATAAGTTACAAGA+CGG + chr5_1:4098850-4098869 Msa0712260:intron 20.0%
!!! CCAAAATTTGTTAAATTGAA+AGG - chr5_1:4099062-4099081 None:intergenic 20.0%
!!! CCTTTCAATTTAACAAATTT+TGG + chr5_1:4099059-4099078 Msa0712260:intron 20.0%
!!! GTCAAAAATTGGAATTTTTT+TGG + chr5_1:4099361-4099380 Msa0712260:intron 20.0%
!! AATTATTAATTGAAGATCTC+GGG + chr5_1:4099433-4099452 Msa0712260:CDS 20.0%
!! TATCAAGAAATGATTTACAA+AGG - chr5_1:4099550-4099569 None:intergenic 20.0%
!!! GTAAATCATTTCTTGATAAT+TGG + chr5_1:4099552-4099571 Msa0712260:intron 20.0%
!! TATATTAAGATTCTCAACTT+TGG + chr5_1:4099650-4099669 Msa0712260:intron 20.0%
!! AATTTCCTAATATCATATAG+AGG - chr5_1:4099776-4099795 None:intergenic 20.0%
!!! TTTGGTTTTGCAATTTTATT+AGG + chr5_1:4100091-4100110 Msa0712260:intron 20.0%
!! TATTTCAATTGCTGAATATA+TGG + chr5_1:4100330-4100349 Msa0712260:intron 20.0%
!! CATTATTACATATGTTGAAT+TGG - chr5_1:4100487-4100506 None:intergenic 20.0%
!!! GTATCTATATAGTTCAATTT+TGG - chr5_1:4100829-4100848 None:intergenic 20.0%
!!! TTATATTCTTTTAAACTGCA+TGG + chr5_1:4100883-4100902 Msa0712260:intron 20.0%
!!! ATTTTTTTCAACTTCATATG+GGG - chr5_1:4101118-4101137 None:intergenic 20.0%
!! TTGGTTCATTATAGAATTAT+AGG + chr5_1:4101174-4101193 Msa0712260:intron 20.0%
!!! TTGTTCTAATTTGTTATGTA+TGG + chr5_1:4101937-4101956 Msa0712260:intron 20.0%
!! ATTTCACATTAATTTAAAGG+GGG + chr5_1:4101991-4102010 Msa0712260:intron 20.0%
!!! GTTTTATATTACGTTGAAAA+GGG - chr5_1:4102076-4102095 None:intergenic 20.0%
!!! TGTTTTATATTACGTTGAAA+AGG - chr5_1:4102077-4102096 None:intergenic 20.0%
!!! ACTAAAAGTATATGATTAGA+TGG - chr5_1:4102104-4102123 None:intergenic 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG - chr5_1:4102291-4102310 None:intergenic 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG - chr5_1:4102292-4102311 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG - chr5_1:4102293-4102312 None:intergenic 20.0%
!! ACATGTAAAATAGAATCAAT+TGG - chr5_1:4102557-4102576 None:intergenic 20.0%
!! CAAGAAAATAAACTTTCTTA+TGG - chr5_1:4103124-4103143 None:intergenic 20.0%
!!! TTTTCTTGTATTTCATGTAT+AGG + chr5_1:4103136-4103155 Msa0712260:intron 20.0%
!! AGGAAATAATAAATGAACAA+AGG - chr5_1:4103528-4103547 None:intergenic 20.0%
!!! GTTCATTTATTATTTCCTTT+TGG + chr5_1:4103530-4103549 Msa0712260:three_prime_UTR 20.0%
! AGAAAATTGGTTAAGTAAAG+CGG - chr5_1:4092402-4092421 None:intergenic 25.0%
! CATCGAAATTAAGATGAAAA+TGG - chr5_1:4092616-4092635 None:intergenic 25.0%
!! TTTTCATCTTAATTTCGATG+TGG + chr5_1:4092616-4092635 Msa0712260:intron 25.0%
!! TCGAATTTTCTTTCTAACAT+TGG + chr5_1:4092896-4092915 Msa0712260:intron 25.0%
!!! TTTAATTTTTGGCTCGATTT+TGG + chr5_1:4092974-4092993 Msa0712260:intron 25.0%
! TACAAAATCTTGTCAAATAG+CGG - chr5_1:4093118-4093137 None:intergenic 25.0%
!! TATTGGCTAACATTAATTTC+GGG - chr5_1:4093218-4093237 None:intergenic 25.0%
! AAAATGCTAGATATCAAGAA+TGG - chr5_1:4093372-4093391 None:intergenic 25.0%
! TAATACAATCAGAACTGAAA+CGG - chr5_1:4093473-4093492 None:intergenic 25.0%
! TATTATGAAACTTAACAGCA+TGG + chr5_1:4093669-4093688 Msa0712260:intron 25.0%
!! TTACAAAGAAGTATATGACA+TGG + chr5_1:4093710-4093729 Msa0712260:CDS 25.0%
!!! ATGAAACCTTGTTTTGTTTT+TGG + chr5_1:4093812-4093831 Msa0712260:intron 25.0%
!! ATTTTGAATTTCTTTCGTCT+TGG + chr5_1:4094344-4094363 Msa0712260:intron 25.0%
!!! AACTCTTAGAATACTTTTTG+GGG - chr5_1:4094643-4094662 None:intergenic 25.0%
!!! CAACTCTTAGAATACTTTTT+GGG - chr5_1:4094644-4094663 None:intergenic 25.0%
!! ACAACTCTTAGAATACTTTT+TGG - chr5_1:4094645-4094664 None:intergenic 25.0%
!! ACAACAATCAATTTCAGTTT+TGG - chr5_1:4094830-4094849 None:intergenic 25.0%
!!! TCCATGATATTAATTTGTAG+GGG + chr5_1:4094863-4094882 Msa0712260:intron 25.0%
!!! GTTGTTTTTTCAAAACTAGA+GGG - chr5_1:4094936-4094955 None:intergenic 25.0%
!!! TGTTGTTTTTTCAAAACTAG+AGG - chr5_1:4094937-4094956 None:intergenic 25.0%
! TGAAATTGTAATCGAAAGAA+GGG - chr5_1:4095136-4095155 None:intergenic 25.0%
! CTAAATTCTAAACTACCATT+TGG + chr5_1:4095332-4095351 Msa0712260:intron 25.0%
!!! ATTTTTTTAAGATACAAGGG+TGG + chr5_1:4095542-4095561 Msa0712260:intron 25.0%
! GTTTAATTAAAAACTAGAGG+GGG + chr5_1:4095570-4095589 Msa0712260:intron 25.0%
! ATAGGATTAGGTAAATGAAA+AGG - chr5_1:4095792-4095811 None:intergenic 25.0%
! ATTTACCTAATCCTATTAAC+CGG + chr5_1:4095796-4095815 Msa0712260:intron 25.0%
! AATGTATTGTATTAAGGAGA+GGG - chr5_1:4095888-4095907 None:intergenic 25.0%
! AGAGTGAATGTATTGTATTA+AGG - chr5_1:4095894-4095913 None:intergenic 25.0%
! AGTAAAGGAATATTATAGCA+AGG - chr5_1:4096168-4096187 None:intergenic 25.0%
!! ATACCTAAGGTATCATATAA+AGG - chr5_1:4096275-4096294 None:intergenic 25.0%
!! CTTTAACTGCAATTGAATTT+TGG + chr5_1:4096332-4096351 Msa0712260:intron 25.0%
!! TTGCAACATTTTTGTCAATA+TGG + chr5_1:4096405-4096424 Msa0712260:intron 25.0%
!! TGCAACATTTTTGTCAATAT+GGG + chr5_1:4096406-4096425 Msa0712260:intron 25.0%
!! TTTTTGCTTATATTTGTGAC+TGG - chr5_1:4096596-4096615 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - chr5_1:4096522-4096541 None:intergenic 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG + chr5_1:4096596-4096615 Msa0712260:intron 25.0%
! AGGAACTTTGTTAATAAAAC+AGG - chr5_1:4096629-4096648 None:intergenic 25.0%
!!! GTGTTTTTAGCATTTAATAC+TGG + chr5_1:4097086-4097105 Msa0712260:intron 25.0%
!!! ATGGACTGAATTTTTACAAT+TGG + chr5_1:4097645-4097664 Msa0712260:CDS 25.0%
! GTAGAAAGAGTAATAATACA+TGG - chr5_1:4097684-4097703 None:intergenic 25.0%
! CAATGCCAATTAATTATACA+AGG - chr5_1:4097738-4097757 None:intergenic 25.0%
! ATAAATAGTCTAAGTACTAC+TGG + chr5_1:4097788-4097807 Msa0712260:intron 25.0%
! TAAATAGTCTAAGTACTACT+GGG + chr5_1:4097789-4097808 Msa0712260:intron 25.0%
! AGAAAAATAAGGATGATATC+AGG + chr5_1:4097859-4097878 Msa0712260:intron 25.0%
!!! CAACAGTTATTTTTCTAAAC+CGG + chr5_1:4097946-4097965 Msa0712260:intron 25.0%
! TGTACAATAATGTATACTAG+CGG + chr5_1:4098102-4098121 Msa0712260:CDS 25.0%
!! AGATTTTGTAAGTCAAAGAA+AGG - chr5_1:4098381-4098400 None:intergenic 25.0%
! TGTAAAGAAAGAAAAAAGAG+GGG - chr5_1:4098404-4098423 None:intergenic 25.0%
! CTGTAAAGAAAGAAAAAAGA+GGG - chr5_1:4098405-4098424 None:intergenic 25.0%
! ACTGTAAAGAAAGAAAAAAG+AGG - chr5_1:4098406-4098425 None:intergenic 25.0%
! AGTAACCTATGTAACAAAAT+AGG - chr5_1:4098894-4098913 None:intergenic 25.0%
! AATTGAATACTGAACGTTTA+TGG - chr5_1:4099241-4099260 None:intergenic 25.0%
!! AAAAAAAAAGGAAAAGCATG+TGG + chr5_1:4099289-4099308 Msa0712260:intron 25.0%
!!! ATTCCAATTTTTGACTTGTT+GGG - chr5_1:4099356-4099375 None:intergenic 25.0%
!!! AATTCCAATTTTTGACTTGT+TGG - chr5_1:4099357-4099376 None:intergenic 25.0%
! ATTATTAATTGAAGATCTCG+GGG + chr5_1:4099434-4099453 Msa0712260:CDS 25.0%
!!! AATATACTTTTTCTTCTAGC+TGG - chr5_1:4099636-4099655 None:intergenic 25.0%
! TGAATCCTCTATATGATATT+AGG + chr5_1:4099768-4099787 Msa0712260:intron 25.0%
! AAGTTGAATAACATGAAGAA+AGG + chr5_1:4099942-4099961 Msa0712260:CDS 25.0%
!! CAATTTTATTAGGTGAAACA+AGG + chr5_1:4100101-4100120 Msa0712260:intron 25.0%
! TTGAAATATGAAACTAGACT+TGG - chr5_1:4100318-4100337 None:intergenic 25.0%
! AGATATCAACATATGTACTA+TGG + chr5_1:4100508-4100527 Msa0712260:intron 25.0%
! ATACTATTTAAATTGGCTGT+TGG + chr5_1:4100845-4100864 Msa0712260:intron 25.0%
! ATAATCTTCATACTTCCATT+AGG - chr5_1:4100941-4100960 None:intergenic 25.0%
! AATATATTCAAGCTTTCACA+AGG + chr5_1:4100974-4100993 Msa0712260:CDS 25.0%
! CAAGAAATAAGAATGCAATT+TGG - chr5_1:4101379-4101398 None:intergenic 25.0%
!! TCTAAAAAAGTATGTTGTGT+GGG - chr5_1:4102048-4102067 None:intergenic 25.0%
!! TTCTAAAAAAGTATGTTGTG+TGG - chr5_1:4102049-4102068 None:intergenic 25.0%
! AAAGTATATGATTAGATGGT+TGG - chr5_1:4102100-4102119 None:intergenic 25.0%
! GGACAAAAATAAAGTCAAAT+GGG - chr5_1:4102208-4102227 None:intergenic 25.0%
! TGAAAAGGAGTTTACATTTA+GGG - chr5_1:4102229-4102248 None:intergenic 25.0%
! TTGAAAAGGAGTTTACATTT+AGG - chr5_1:4102230-4102249 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG - chr5_1:4102281-4102300 None:intergenic 25.0%
! AGAAATGTGAAAAAAGCAAA+AGG + chr5_1:4102417-4102436 Msa0712260:intron 25.0%
! GAAATGTGAAAAAAGCAAAA+GGG + chr5_1:4102418-4102437 Msa0712260:intron 25.0%
! AAATGTGAAAAAAGCAAAAG+GGG + chr5_1:4102419-4102438 Msa0712260:intron 25.0%
! TTAACTAAGATTCAATGACT+AGG + chr5_1:4102468-4102487 Msa0712260:intron 25.0%
!! CCTCTGAACAAAATTATTTT+GGG - chr5_1:4102497-4102516 None:intergenic 25.0%
!! TCCTCTGAACAAAATTATTT+TGG - chr5_1:4102498-4102517 None:intergenic 25.0%
!! TTTCTGCTTTATTATAGGAA+TGG + chr5_1:4102808-4102827 Msa0712260:intron 25.0%
! CACATCTAATCTAATAACAT+AGG - chr5_1:4102972-4102991 None:intergenic 25.0%
! TAGTTGTATCCTAAGTAATT+TGG + chr5_1:4103212-4103231 Msa0712260:intron 25.0%
! AGTTGTATCCTAAGTAATTT+GGG + chr5_1:4103213-4103232 Msa0712260:intron 25.0%
! ACAGAAATTATTAAGTGAAG+TGG - chr5_1:4103353-4103372 None:intergenic 25.0%
! AATAAATTATCTGCATGACA+TGG - chr5_1:4103484-4103503 None:intergenic 25.0%
! TACATATGATTATGAAGAGA+CGG + chr5_1:4103563-4103582 Msa0712260:three_prime_UTR 25.0%
! ATGTTTGTAACGAATATTGT+CGG - chr5_1:4103660-4103679 None:intergenic 25.0%
! ATTCGTTACAAACATTTGTT+AGG + chr5_1:4103665-4103684 Msa0712260:three_prime_UTR 25.0%
!! TTGTTAATTTTGCTAAGGAA+TGG - chr5_1:4103707-4103726 None:intergenic 25.0%
! TTCCTTAGCAAAATTAACAA+TGG + chr5_1:4103707-4103726 Msa0712260:three_prime_UTR 25.0%
!!! TCTTGTTTTTTACTTAGAGA+TGG + chr5_1:4103736-4103755 Msa0712260:three_prime_UTR 25.0%
ACTTTAAATGCAGTTAACGA+TGG - chr5_1:4092344-4092363 None:intergenic 30.0%
ATCATTCAGAGTGAGTAAAT+CGG + chr5_1:4092855-4092874 Msa0712260:intron 30.0%
!!! GTAAATCGGATTTTGCTATT+CGG + chr5_1:4092869-4092888 Msa0712260:intron 30.0%
TGATGAATTCAAGAATGACA+TGG - chr5_1:4093342-4093361 None:intergenic 30.0%
!!! TCGCTTTTCTAGCTAAAATT+TGG + chr5_1:4093425-4093444 Msa0712260:intron 30.0%
TATCCAAATAATCCTATGCT+TGG + chr5_1:4093521-4093540 Msa0712260:CDS 30.0%
AATAAGTCAAAATCCATGAC+CGG - chr5_1:4093634-4093653 None:intergenic 30.0%
!! TTCATTTTCTGGTAATCAAG+AGG - chr5_1:4093797-4093816 None:intergenic 30.0%
! CAAAACAAGGTTTCATTTTC+TGG - chr5_1:4093808-4093827 None:intergenic 30.0%
!! GAGCTTAATTTGTATATTGC+TGG + chr5_1:4094248-4094267 Msa0712260:intron 30.0%
!! TTTGTATATTGCTGGTTTAC+AGG + chr5_1:4094256-4094275 Msa0712260:intron 30.0%
!! TTGTATATTGCTGGTTTACA+GGG + chr5_1:4094257-4094276 Msa0712260:intron 30.0%
GGTGTAAAATGTGGTATTTA+TGG + chr5_1:4094278-4094297 Msa0712260:CDS 30.0%
! AACAAAACAGGGTTTAGAAT+TGG - chr5_1:4094387-4094406 None:intergenic 30.0%
CACAAAACAAAACCTTCAAT+GGG - chr5_1:4094448-4094467 None:intergenic 30.0%
! CATTGAACTGACTCAATATT+TGG - chr5_1:4094561-4094580 None:intergenic 30.0%
CAAATATTGAGTCAGTTCAA+TGG + chr5_1:4094559-4094578 Msa0712260:intron 30.0%
! AGCATAACATTGATGACTTA+GGG - chr5_1:4094587-4094606 None:intergenic 30.0%
!! ACTCTTAGAATACTTTTTGG+GGG - chr5_1:4094642-4094661 None:intergenic 30.0%
TCCCCTACAAATTAATATCA+TGG - chr5_1:4094867-4094886 None:intergenic 30.0%
! TGTTATTTACCCATACTTGA+GGG - chr5_1:4094905-4094924 None:intergenic 30.0%
ATGCTTCTCATCCATAAATT+AGG + chr5_1:4095017-4095036 Msa0712260:intron 30.0%
TCTCATCCATAAATTAGGTT+CGG + chr5_1:4095022-4095041 Msa0712260:intron 30.0%
GTGAAATTGTAATCGAAAGA+AGG - chr5_1:4095137-4095156 None:intergenic 30.0%
TTGATAGACGTTTAACCAAA+TGG - chr5_1:4095350-4095369 None:intergenic 30.0%
! GTAACTTCCTCTAATTTGTA+AGG + chr5_1:4095631-4095650 Msa0712260:intron 30.0%
! TTAAAAGTGTATTACAGGAG+AGG - chr5_1:4095863-4095882 None:intergenic 30.0%
GAATGTATTGTATTAAGGAG+AGG - chr5_1:4095889-4095908 None:intergenic 30.0%
! TAGTCCTTGTTGACTATAAA+GGG + chr5_1:4096018-4096037 Msa0712260:intron 30.0%
GTTCCTTTATATGATACCTT+AGG + chr5_1:4096269-4096288 Msa0712260:CDS 30.0%
AAAACGTTTACACATACCTA+AGG - chr5_1:4096288-4096307 None:intergenic 30.0%
TAAGAACTTTGATGTCTATC+CGG + chr5_1:4096694-4096713 Msa0712260:intron 30.0%
CAGCAATAAGCTCATAAATT+AGG - chr5_1:4096794-4096813 None:intergenic 30.0%
CTTGAAATTTATTACCATGC+AGG + chr5_1:4096891-4096910 Msa0712260:intron 30.0%
CAAAATTTGAATTTCCTGCA+TGG - chr5_1:4096908-4096927 None:intergenic 30.0%
TTATTGGGCAAAATCATTGT+GGG + chr5_1:4096980-4096999 Msa0712260:intron 30.0%
!! GAAATGGGTTATACATAAAG+TGG + chr5_1:4097015-4097034 Msa0712260:intron 30.0%
ATTTCACCCAATAAAAGAGT+GGG + chr5_1:4097052-4097071 Msa0712260:intron 30.0%
! TTAACACCCACTCTTTTATT+GGG - chr5_1:4097061-4097080 None:intergenic 30.0%
! TTTAACACCCACTCTTTTAT+TGG - chr5_1:4097062-4097081 None:intergenic 30.0%
GTGTCAAAACCAATGATAAT+TGG - chr5_1:4097215-4097234 None:intergenic 30.0%
CTCTCATACATATATGACTT+AGG + chr5_1:4097234-4097253 Msa0712260:intron 30.0%
TACATATATGACTTAGGTTC+TGG + chr5_1:4097240-4097259 Msa0712260:intron 30.0%
ACATATATGACTTAGGTTCT+GGG + chr5_1:4097241-4097260 Msa0712260:intron 30.0%
ATTTATTATATCCCATGCAG+AGG + chr5_1:4097272-4097291 Msa0712260:CDS 30.0%
TATTTCAATAGATGAACCTC+AGG - chr5_1:4097330-4097349 None:intergenic 30.0%
TTGAGATATTTGGTTGCATT+TGG - chr5_1:4097470-4097489 None:intergenic 30.0%
ACACTTACTCTTGAGATATT+TGG - chr5_1:4097480-4097499 None:intergenic 30.0%
!! AACTTCTTGCTTTTGTTCAA+GGG - chr5_1:4097599-4097618 None:intergenic 30.0%
AAGCAAGAAGTTGAAAAGTT+TGG + chr5_1:4097607-4097626 Msa0712260:CDS 30.0%
AGAAGTTGAAAAGTTTGGAT+TGG + chr5_1:4097612-4097631 Msa0712260:CDS 30.0%
!! TTGGATTGGCAATATATTCA+TGG + chr5_1:4097626-4097645 Msa0712260:CDS 30.0%
TTCTACTCTTGCTTGTAAAT+TGG + chr5_1:4097698-4097717 Msa0712260:intron 30.0%
CTGCTCCTTGTATAATTAAT+TGG + chr5_1:4097730-4097749 Msa0712260:intron 30.0%
TAGACTATTTATGCTGCAAA+GGG - chr5_1:4097780-4097799 None:intergenic 30.0%
TTAGACTATTTATGCTGCAA+AGG - chr5_1:4097781-4097800 None:intergenic 30.0%
ATAGAAACTTACGCATTGTT+TGG + chr5_1:4097885-4097904 Msa0712260:intron 30.0%
! ATTGTTTGGTTAGTTGACTT+GGG + chr5_1:4097899-4097918 Msa0712260:intron 30.0%
CTACTTCTATAGACATATTG+TGG + chr5_1:4097994-4098013 Msa0712260:intron 30.0%
! TGATTTTTAATACTTGCCAC+AGG + chr5_1:4098032-4098051 Msa0712260:intron 30.0%
! GATTTTTAATACTTGCCACA+GGG + chr5_1:4098033-4098052 Msa0712260:intron 30.0%
! ATATCGCTTCTTTTCTTTAC+AGG - chr5_1:4098081-4098100 None:intergenic 30.0%
TATATCCAATTTCAAAGCTC+TGG + chr5_1:4098309-4098328 Msa0712260:intron 30.0%
!! TATATCCAGAGCTTTGAAAT+TGG - chr5_1:4098317-4098336 None:intergenic 30.0%
TCATTGAGGAGACATTTATA+TGG + chr5_1:4098483-4098502 Msa0712260:CDS 30.0%
! GATCACCTATTTTGTTACAT+AGG + chr5_1:4098886-4098905 Msa0712260:intron 30.0%
AAATCTTTGTGCAAAACTTG+TGG - chr5_1:4099033-4099052 None:intergenic 30.0%
GGCACATCTATAAAATCATT+TGG + chr5_1:4099137-4099156 Msa0712260:intron 30.0%
TTGACGTGAACAAATTATTG+AGG - chr5_1:4099178-4099197 None:intergenic 30.0%
!!! TTCCAATTTTTGACTTGTTG+GGG - chr5_1:4099355-4099374 None:intergenic 30.0%
! AAAACCAACTATTTTCTGTG+CGG + chr5_1:4099461-4099480 Msa0712260:CDS 30.0%
! TCATTTCTTGATAATTGGAG+TGG + chr5_1:4099557-4099576 Msa0712260:intron 30.0%
! CATTTCTTGATAATTGGAGT+GGG + chr5_1:4099558-4099577 Msa0712260:intron 30.0%
AAAAATAGGGAAGAAATGTG+GGG - chr5_1:4099592-4099611 None:intergenic 30.0%
GAAAAATAGGGAAGAAATGT+GGG - chr5_1:4099593-4099612 None:intergenic 30.0%
AGAAAAATAGGGAAGAAATG+TGG - chr5_1:4099594-4099613 None:intergenic 30.0%
! TTTCTTCTAGCTGGAAAAAA+GGG - chr5_1:4099627-4099646 None:intergenic 30.0%
!! TTTTCTTCTAGCTGGAAAAA+AGG - chr5_1:4099628-4099647 None:intergenic 30.0%
TTGACACAGAAAATTTCTTC+TGG + chr5_1:4099682-4099701 Msa0712260:CDS 30.0%
AGTTGAATAATGTCTTCTTC+AGG - chr5_1:4099714-4099733 None:intergenic 30.0%
AGAATATTGCAATGCTTACT+GGG - chr5_1:4099890-4099909 None:intergenic 30.0%
TAGAATATTGCAATGCTTAC+TGG - chr5_1:4099891-4099910 None:intergenic 30.0%
! TTTTCTCCATTTGACTGATT+TGG + chr5_1:4100073-4100092 Msa0712260:intron 30.0%
TATTAGGTGAAACAAGGTTT+AGG + chr5_1:4100107-4100126 Msa0712260:intron 30.0%
ATTAGGTGAAACAAGGTTTA+GGG + chr5_1:4100108-4100127 Msa0712260:intron 30.0%
TATCTATGTGCTTATTGCAT+GGG - chr5_1:4100268-4100287 None:intergenic 30.0%
ATATCTATGTGCTTATTGCA+TGG - chr5_1:4100269-4100288 None:intergenic 30.0%
AGTCTAACTGAAATCTATGT+TGG + chr5_1:4100438-4100457 Msa0712260:intron 30.0%
GTCTTTGTTGAAATGAAAAC+AGG + chr5_1:4100544-4100563 Msa0712260:intron 30.0%
!! TTCATTTGGTAATGAGACAA+AGG - chr5_1:4100593-4100612 None:intergenic 30.0%
TTTACACAAATTTCTCCTCT+TGG - chr5_1:4100712-4100731 None:intergenic 30.0%
AAGAGGAGAAATTTGTGTAA+AGG + chr5_1:4100711-4100730 Msa0712260:CDS 30.0%
AGAGGAGAAATTTGTGTAAA+GGG + chr5_1:4100712-4100731 Msa0712260:CDS 30.0%
GAAAACATCAATAACCTGTA+TGG - chr5_1:4100807-4100826 None:intergenic 30.0%
GAAGTATGAAGATTATTGAC+CGG + chr5_1:4100945-4100964 Msa0712260:CDS 30.0%
GCTTGAATATATTCTTCTTC+CGG - chr5_1:4100967-4100986 None:intergenic 30.0%
! AATATTCTCCAGGTTTTCAA+CGG - chr5_1:4101011-4101030 None:intergenic 30.0%
GAATAATTTCACTACAAGCT+AGG - chr5_1:4101096-4101115 None:intergenic 30.0%
ACGGAATTCAAAATATAAGC+AGG + chr5_1:4101280-4101299 Msa0712260:intron 30.0%
ATGCAATTTGGATTATGCTA+CGG - chr5_1:4101367-4101386 None:intergenic 30.0%
! ATTGCATTCTTATTTCTTGC+TGG + chr5_1:4101380-4101399 Msa0712260:intron 30.0%
TCATAATGAACTACAGAATG+TGG - chr5_1:4101531-4101550 None:intergenic 30.0%
TGATCATTTGTCCAATAGAT+AGG + chr5_1:4101548-4101567 Msa0712260:intron 30.0%
ACAAGAATAGTCCTATCTAT+TGG - chr5_1:4101562-4101581 None:intergenic 30.0%
TGTTTATGAGCTTATGCATA+TGG - chr5_1:4101621-4101640 None:intergenic 30.0%
AAAGATTGGAAAGGAAAAGA+AGG + chr5_1:4101888-4101907 Msa0712260:CDS 30.0%
TCAAATGGGTGTTTAGATAT+AGG - chr5_1:4102194-4102213 None:intergenic 30.0%
GGGACAAAAATAAAGTCAAA+TGG - chr5_1:4102209-4102228 None:intergenic 30.0%
ATGCGTCTAGTAATTTGAAA+AGG - chr5_1:4102244-4102263 None:intergenic 30.0%
TTGAATACGCATACAAACAA+AGG + chr5_1:4102334-4102353 Msa0712260:intron 30.0%
CATACAAACAAAGGACAATT+TGG + chr5_1:4102343-4102362 Msa0712260:intron 30.0%
AATGTGAAAAAAGCAAAAGG+GGG + chr5_1:4102420-4102439 Msa0712260:intron 30.0%
! CCCAAAATAATTTTGTTCAG+AGG + chr5_1:4102494-4102513 Msa0712260:intron 30.0%
!!! TGTTCAGAGGATTTTTTAAC+TGG + chr5_1:4102507-4102526 Msa0712260:intron 30.0%
!!! TTTTTTAACTGGTGTGTGTA+TGG + chr5_1:4102518-4102537 Msa0712260:intron 30.0%
TCTTATATGTTGGAGTGATA+AGG - chr5_1:4102709-4102728 None:intergenic 30.0%
GTAAAAGTTGTCAAATTCTC+AGG + chr5_1:4102761-4102780 Msa0712260:intron 30.0%
TCAGTGGAAAGAAAATATGA+GGG - chr5_1:4102874-4102893 None:intergenic 30.0%
GATATTAAAGCAGTGAAACA+GGG - chr5_1:4103016-4103035 None:intergenic 30.0%
TGATATTAAAGCAGTGAAAC+AGG - chr5_1:4103017-4103036 None:intergenic 30.0%
GGCTTGTATGTATATAAACA+AGG + chr5_1:4103096-4103115 Msa0712260:intron 30.0%
TAGGTATTCCCAAATTACTT+AGG - chr5_1:4103224-4103243 None:intergenic 30.0%
AAGTAATTTGGGAATACCTA+AGG + chr5_1:4103224-4103243 Msa0712260:intron 30.0%
TGCTCACAACTATTAATTAG+AGG - chr5_1:4103292-4103311 None:intergenic 30.0%
AATTGCAGTTAAAAGTGAAG+TGG - chr5_1:4103328-4103347 None:intergenic 30.0%
!! ACTGACTGCAATTTTATTTG+TGG + chr5_1:4103384-4103403 Msa0712260:intron 30.0%
! CACCATTGTTAATTTTGCTA+AGG - chr5_1:4103712-4103731 None:intergenic 30.0%
!!! TTTTGACTTTGAAGAGTCGA+TGG - chr5_1:4092299-4092318 None:intergenic 35.0%
GTTTAAGGGAAAGGGAATAT+TGG - chr5_1:4092322-4092341 None:intergenic 35.0%
TAACGATGGTTTAAGGGAAA+GGG - chr5_1:4092330-4092349 None:intergenic 35.0%
TTAACGATGGTTTAAGGGAA+AGG - chr5_1:4092331-4092350 None:intergenic 35.0%
TGCAGTTAACGATGGTTTAA+GGG - chr5_1:4092336-4092355 None:intergenic 35.0%
ATGCAGTTAACGATGGTTTA+AGG - chr5_1:4092337-4092356 None:intergenic 35.0%
CGATCTATCGATGAGAAAAT+TGG - chr5_1:4092415-4092434 None:intergenic 35.0%
GCAGAAAAGATTCATCATTG+AGG + chr5_1:4092447-4092466 Msa0712260:CDS 35.0%
TCCTCTTGAAGGTTTATCTT+CGG - chr5_1:4092494-4092513 None:intergenic 35.0%
! ATAGTTGCTGGGATGTTTTT+CGG + chr5_1:4092572-4092591 Msa0712260:CDS 35.0%
AGCATAGAGGACTTGAATAT+TGG + chr5_1:4092950-4092969 Msa0712260:intron 35.0%
CTACCAAGCATAGGATTATT+TGG - chr5_1:4093527-4093546 None:intergenic 35.0%
TATGACATGGTGATCAAAGT+CGG + chr5_1:4093723-4093742 Msa0712260:CDS 35.0%
TTGGATTCTCTGTACATGTT+GGG + chr5_1:4093877-4093896 Msa0712260:intron 35.0%
AACTCACATGAACATGTTCT+TGG - chr5_1:4094074-4094093 None:intergenic 35.0%
! TTTTCCTGATGAACTTAAGC+TGG + chr5_1:4094153-4094172 Msa0712260:intron 35.0%
AAAGATTGGGGAACAAAACA+GGG - chr5_1:4094398-4094417 None:intergenic 35.0%
AAAACAAAACCTTCAATGGG+AGG - chr5_1:4094445-4094464 None:intergenic 35.0%
CCACAAAACAAAACCTTCAA+TGG - chr5_1:4094449-4094468 None:intergenic 35.0%
!!! CCATTGAAGGTTTTGTTTTG+TGG + chr5_1:4094446-4094465 Msa0712260:intron 35.0%
ATGTGTTGGATCACACAATA+AGG - chr5_1:4094513-4094532 None:intergenic 35.0%
! GCATAACATTGATGACTTAG+GGG - chr5_1:4094586-4094605 None:intergenic 35.0%
! GAGCATAACATTGATGACTT+AGG - chr5_1:4094588-4094607 None:intergenic 35.0%
CAATGTTATGCTCTCTCATT+TGG + chr5_1:4094595-4094614 Msa0712260:intron 35.0%
GGGGACTTAAATCAGAAATA+AGG - chr5_1:4094623-4094642 None:intergenic 35.0%
AAAAGTTGGACACATTGGAT+CGG - chr5_1:4094730-4094749 None:intergenic 35.0%
CTACAATGACTTCGATTAGA+AGG - chr5_1:4094774-4094793 None:intergenic 35.0%
TCTAATCGAAGTCATTGTAG+AGG + chr5_1:4094774-4094793 Msa0712260:intron 35.0%
GTTATTTACCCATACTTGAG+GGG - chr5_1:4094904-4094923 None:intergenic 35.0%
!! GTGTTATTTACCCATACTTG+AGG - chr5_1:4094906-4094925 None:intergenic 35.0%
! ATGAGAAGCATATGACAGAA+AGG - chr5_1:4095008-4095027 None:intergenic 35.0%
ACATATTCAAGGTTTCTCCA+GGG - chr5_1:4095454-4095473 None:intergenic 35.0%
GGATTAGGTAAATGAAAAGG+AGG - chr5_1:4095789-4095808 None:intergenic 35.0%
! GGGCATTAAAAGTGTATTAC+AGG - chr5_1:4095868-4095887 None:intergenic 35.0%
! TACATTCACTCTGTTTGTTG+CGG + chr5_1:4095902-4095921 Msa0712260:intron 35.0%
GAACAGGTATAAAACCGAAA+AGG - chr5_1:4095946-4095965 None:intergenic 35.0%
! ATGTCTCCTGTGTTTTCTTT+TGG + chr5_1:4095978-4095997 Msa0712260:intron 35.0%
GAACAACCAAAAGAAAACAC+AGG - chr5_1:4095987-4096006 None:intergenic 35.0%
! GTAGTCCTTGTTGACTATAA+AGG + chr5_1:4096017-4096036 Msa0712260:intron 35.0%
ATTGCCCTTTATAGTCAACA+AGG - chr5_1:4096025-4096044 None:intergenic 35.0%
TTATTGCTCTTATGCTTTCG+TGG + chr5_1:4096117-4096136 Msa0712260:intron 35.0%
ATATTATAGCAAGGTGACCA+GGG - chr5_1:4096159-4096178 None:intergenic 35.0%
AATATTATAGCAAGGTGACC+AGG - chr5_1:4096160-4096179 None:intergenic 35.0%
TGCATGTTTGTACACAGTTA+TGG + chr5_1:4096307-4096326 Msa0712260:intron 35.0%
AAATCTCATGCACATAGGTT+TGG - chr5_1:4096361-4096380 None:intergenic 35.0%
GTGTAAAATCTCATGCACAT+AGG - chr5_1:4096366-4096385 None:intergenic 35.0%
TAGCATAAATTGGTGAGCTT+GGG - chr5_1:4096450-4096469 None:intergenic 35.0%
TTAGCATAAATTGGTGAGCT+TGG - chr5_1:4096451-4096470 None:intergenic 35.0%
TGCTTATATTTGTGACTGGA+GGG - chr5_1:4096483-4096502 None:intergenic 35.0%
TTGCTTATATTTGTGACTGG+AGG - chr5_1:4096484-4096503 None:intergenic 35.0%
TAATAAAACAGGTACACCAC+CGG - chr5_1:4096618-4096637 None:intergenic 35.0%
! TTTAGGCAACTGACAAGTTT+TGG - chr5_1:4096836-4096855 None:intergenic 35.0%
CTTATTGGGCAAAATCATTG+TGG + chr5_1:4096979-4096998 Msa0712260:intron 35.0%
TATTGGGCAAAATCATTGTG+GGG + chr5_1:4096981-4097000 Msa0712260:intron 35.0%
! ATGGGTTATACATAAAGTGG+TGG + chr5_1:4097018-4097037 Msa0712260:intron 35.0%
TGGGTTATACATAAAGTGGT+GGG + chr5_1:4097019-4097038 Msa0712260:intron 35.0%
TTATTGGGTGAAATCCACAT+GGG - chr5_1:4097046-4097065 None:intergenic 35.0%
TTTATTGGGTGAAATCCACA+TGG - chr5_1:4097047-4097066 None:intergenic 35.0%
GATTTCACCCAATAAAAGAG+TGG + chr5_1:4097051-4097070 Msa0712260:intron 35.0%
CATATATGACTTAGGTTCTG+GGG + chr5_1:4097242-4097261 Msa0712260:intron 35.0%
AGAAGAAAAGAAGATACCTG+AGG + chr5_1:4097311-4097330 Msa0712260:CDS 35.0%
GACAGACTGTTCAAAGAAAA+GGG - chr5_1:4097401-4097420 None:intergenic 35.0%
AGACAGACTGTTCAAAGAAA+AGG - chr5_1:4097402-4097421 None:intergenic 35.0%
TATACAGCAATTGTGAGCTT+CGG + chr5_1:4097565-4097584 Msa0712260:intron 35.0%
!! CAACTTCTTGCTTTTGTTCA+AGG - chr5_1:4097600-4097619 None:intergenic 35.0%
AGACTATTTATGCTGCAAAG+GGG - chr5_1:4097779-4097798 None:intergenic 35.0%
! CATTGTTTGGTTAGTTGACT+TGG + chr5_1:4097898-4097917 Msa0712260:intron 35.0%
AGACATTAATTACTGCTAGC+CGG - chr5_1:4097968-4097987 None:intergenic 35.0%
TTGGATATCAATACTCCCTT+GGG - chr5_1:4098141-4098160 None:intergenic 35.0%
ATTGGATATCAATACTCCCT+TGG - chr5_1:4098142-4098161 None:intergenic 35.0%
GAGGGTAATAATACTCTCAT+TGG - chr5_1:4098160-4098179 None:intergenic 35.0%
AGTATTATTACCCTCTTAGC+TGG + chr5_1:4098165-4098184 Msa0712260:CDS 35.0%
TTCTTTACAGTTGACTGAGA+AGG + chr5_1:4098415-4098434 Msa0712260:intron 35.0%
! TAATTTTATCACCCCAACAC+AGG + chr5_1:4098602-4098621 Msa0712260:intron 35.0%
! AATTTTATCACCCCAACACA+GGG + chr5_1:4098603-4098622 Msa0712260:intron 35.0%
GTAACAAAATAGGTGATCAG+TGG - chr5_1:4098884-4098903 None:intergenic 35.0%
AGTACACTCTATCAAGTACA+CGG - chr5_1:4099491-4099510 None:intergenic 35.0%
AAAATAGGGAAGAAATGTGG+GGG - chr5_1:4099591-4099610 None:intergenic 35.0%
! TTCTTCTAGCTGGAAAAAAG+GGG - chr5_1:4099626-4099645 None:intergenic 35.0%
ACACAGAAAATTTCTTCTGG+AGG + chr5_1:4099685-4099704 Msa0712260:CDS 35.0%
AACACAACTTTGTCAAGAAG+TGG - chr5_1:4099990-4100009 None:intergenic 35.0%
TGACAAAGTTGTGTTCGATA+AGG + chr5_1:4099995-4100014 Msa0712260:CDS 35.0%
AATACAATGCTGTGAAACTG+CGG - chr5_1:4100055-4100074 None:intergenic 35.0%
GCAAAACCAAATCAGTCAAA+TGG - chr5_1:4100082-4100101 None:intergenic 35.0%
TTAGGTGAAACAAGGTTTAG+GGG + chr5_1:4100109-4100128 Msa0712260:intron 35.0%
!!! AGTGTACGTCTTATTTTGTC+TGG + chr5_1:4100134-4100153 Msa0712260:CDS 35.0%
TAAGTAACTTTCCACATGCA+AGG - chr5_1:4100174-4100193 None:intergenic 35.0%
TGCATGTGGAAAGTTACTTA+CGG + chr5_1:4100174-4100193 Msa0712260:CDS 35.0%
! CCAAGCATATCTAGTTCATT+TGG - chr5_1:4100607-4100626 None:intergenic 35.0%
CCAAATGAACTAGATATGCT+TGG + chr5_1:4100604-4100623 Msa0712260:CDS 35.0%
!!! AAAGGGTGATACCTTGTTTT+CGG + chr5_1:4100729-4100748 Msa0712260:CDS 35.0%
AACTGCATGGTTTATTCAAC+AGG + chr5_1:4100896-4100915 Msa0712260:intron 35.0%
ACTGCATGGTTTATTCAACA+GGG + chr5_1:4100897-4100916 Msa0712260:intron 35.0%
CTTGGCTATAAATATTCTCC+AGG - chr5_1:4101021-4101040 None:intergenic 35.0%
CAGATTCAACAGAAGTAACT+TGG - chr5_1:4101039-4101058 None:intergenic 35.0%
ACATGAATTGATGAACTCGT+TGG + chr5_1:4101155-4101174 Msa0712260:intron 35.0%
AGAAGAAAATGGTATATCCG+TGG + chr5_1:4101807-4101826 Msa0712260:CDS 35.0%
TGGGTGTTTAGATATAGGAA+CGG - chr5_1:4102189-4102208 None:intergenic 35.0%
ACTAAGATTCAATGACTAGG+TGG + chr5_1:4102471-4102490 Msa0712260:intron 35.0%
CCATCATCGCATAAAATTTC+AGG - chr5_1:4102608-4102627 None:intergenic 35.0%
! CCTGAAATTTTATGCGATGA+TGG + chr5_1:4102605-4102624 Msa0712260:intron 35.0%
GGATATGTTTGACAGTTGAA+AGG + chr5_1:4102626-4102645 Msa0712260:intron 35.0%
GTTCCATATCAAATGGAACT+GGG - chr5_1:4102682-4102701 None:intergenic 35.0%
CTCCAACATATAAGAAGAAG+AGG + chr5_1:4102714-4102733 Msa0712260:CDS 35.0%
TGATAGTATTTCAGCAACTG+AGG - chr5_1:4102740-4102759 None:intergenic 35.0%
TCAGTTGCTGAAATACTATC+AGG + chr5_1:4102739-4102758 Msa0712260:CDS 35.0%
TGGAAAGAAAATATGAGGGA+AGG - chr5_1:4102870-4102889 None:intergenic 35.0%
CTCAGTGGAAAGAAAATATG+AGG - chr5_1:4102875-4102894 None:intergenic 35.0%
TTTACTTACACGTTCACCTT+AGG - chr5_1:4103243-4103262 None:intergenic 35.0%
ATCGATGACATGTACAAAAG+TGG + chr5_1:4103418-4103437 Msa0712260:CDS 35.0%
ATGTACAGACAGTAACCAAA+AGG - chr5_1:4103548-4103567 None:intergenic 35.0%
GTATCTTTCACAGTTGAGTA+AGG - chr5_1:4103600-4103619 None:intergenic 35.0%
TTTGTAACGAATATTGTCGG+AGG - chr5_1:4103657-4103676 None:intergenic 35.0%
CATTGAGGTTGAAAAAGCGA+AGG + chr5_1:4092462-4092481 Msa0712260:CDS 40.0%
ACCGAAGATAAACCTTCAAG+AGG + chr5_1:4092490-4092509 Msa0712260:CDS 40.0%
CGTAGCATCTTCGCTAAAAA+TGG + chr5_1:4092523-4092542 Msa0712260:CDS 40.0%
CAACTATCAAGACCAGGAAT+AGG - chr5_1:4092559-4092578 None:intergenic 40.0%
! TTTTGTGTGTGTGAGCATAG+AGG + chr5_1:4092937-4092956 Msa0712260:intron 40.0%
TAGCCAATAAAATCTCAGCC+TGG + chr5_1:4093229-4093248 Msa0712260:intron 40.0%
GGCTAATGTCTTGTCAATAC+AGG - chr5_1:4093452-4093471 None:intergenic 40.0%
! TTTTCTTGCCATAGCTTGAC+CGG + chr5_1:4093612-4093631 Msa0712260:intron 40.0%
CTTGGATTCTCTGTACATGT+TGG + chr5_1:4093876-4093895 Msa0712260:intron 40.0%
TGTGCAATGCCAAATTTGTG+CGG + chr5_1:4093934-4093953 Msa0712260:intron 40.0%
TGCATGAAACCGCACAAATT+TGG - chr5_1:4093946-4093965 None:intergenic 40.0%
TTTGTGCGGTTTCATGCAAT+TGG + chr5_1:4093948-4093967 Msa0712260:intron 40.0%
TTTGCCAGCTTAAGTTCATC+AGG - chr5_1:4094160-4094179 None:intergenic 40.0%
GGTTTACAGGGTGTAAAATG+TGG + chr5_1:4094269-4094288 Msa0712260:intron 40.0%
CATAATCCACTCTGCAGAAT+TGG - chr5_1:4094306-4094325 None:intergenic 40.0%
GAAAGATTGGGGAACAAAAC+AGG - chr5_1:4094399-4094418 None:intergenic 40.0%
! AATTTTGTGCTGCCTCGTAA+GGG - chr5_1:4094479-4094498 None:intergenic 40.0%
! TAATTTTGTGCTGCCTCGTA+AGG - chr5_1:4094480-4094499 None:intergenic 40.0%
TTACGAGGCAGCACAAAATT+AGG + chr5_1:4094479-4094498 Msa0712260:intron 40.0%
TACGAGGCAGCACAAAATTA+GGG + chr5_1:4094480-4094499 Msa0712260:intron 40.0%
CTAAGAGTTGTTCCTCTTGA+AGG + chr5_1:4094654-4094673 Msa0712260:intron 40.0%
TAGAACATTGAAGTGCAAGC+TGG - chr5_1:4094683-4094702 None:intergenic 40.0%
AGGGAAAAAGTTGGACACAT+TGG - chr5_1:4094735-4094754 None:intergenic 40.0%
AGAGACAAGAGGGAAAAAGT+TGG - chr5_1:4094744-4094763 None:intergenic 40.0%
TGACTTCGATTAGAAGGTTG+AGG - chr5_1:4094768-4094787 None:intergenic 40.0%
! CAACCAGTCATAGGCTTTAA+TGG + chr5_1:4094802-4094821 Msa0712260:intron 40.0%
ATTCACATCCCCTCAAGTAT+GGG + chr5_1:4094893-4094912 Msa0712260:intron 40.0%
! AGAAGCATATGACAGAAAGG+AGG - chr5_1:4095005-4095024 None:intergenic 40.0%
TGACAGCCGAACCTAATTTA+TGG - chr5_1:4095031-4095050 None:intergenic 40.0%
! AGGATCTAAGATTGACGAGA+AGG - chr5_1:4095282-4095301 None:intergenic 40.0%
! GAGCAAAGGAAAGGGTTTTA+AGG - chr5_1:4095302-4095321 None:intergenic 40.0%
TTAGAACGACAGAAGAGCAA+AGG - chr5_1:4095316-4095335 None:intergenic 40.0%
ATTCGATTTCGTGAAATCCC+TGG + chr5_1:4095434-4095453 Msa0712260:intron 40.0%
CACATATTCAAGGTTTCTCC+AGG - chr5_1:4095455-4095474 None:intergenic 40.0%
! ATAGACACCGTTAACTTGAG+AGG + chr5_1:4095505-4095524 Msa0712260:intron 40.0%
! TAGACACCGTTAACTTGAGA+GGG + chr5_1:4095506-4095525 Msa0712260:intron 40.0%
TGCTATTGAGTCAAACCTCA+GGG + chr5_1:4095599-4095618 Msa0712260:intron 40.0%
GCACTTGCCTTACAAATTAG+AGG - chr5_1:4095641-4095660 None:intergenic 40.0%
! GCAGAGTTGGAGAAATTTTG+AGG - chr5_1:4095686-4095705 None:intergenic 40.0%
ATGGAATCTTTCCTTCTCCA+AGG + chr5_1:4095716-4095735 Msa0712260:intron 40.0%
AGTACAAATCAGATCCTGGA+AGG - chr5_1:4095759-4095778 None:intergenic 40.0%
! GAAGAGTACAAATCAGATCC+TGG - chr5_1:4095763-4095782 None:intergenic 40.0%
ACGAACCGGTTAATAGGATT+AGG - chr5_1:4095804-4095823 None:intergenic 40.0%
GTGTATTACAGGAGAGGTAA+GGG - chr5_1:4095857-4095876 None:intergenic 40.0%
AGTGTATTACAGGAGAGGTA+AGG - chr5_1:4095858-4095877 None:intergenic 40.0%
TGAGTGGAAGAAGCTAGTAA+AGG - chr5_1:4096183-4096202 None:intergenic 40.0%
TTGCTTATATTTGTGACCGG+TGG + chr5_1:4096599-4096618 Msa0712260:intron 40.0%
!! CAACTGACAAGTTTTGGTGA+AGG - chr5_1:4096830-4096849 None:intergenic 40.0%
TCTACCACTCACTCTCTTAT+TGG + chr5_1:4096964-4096983 Msa0712260:intron 40.0%
CTACCACTCACTCTCTTATT+GGG + chr5_1:4096965-4096984 Msa0712260:intron 40.0%
ATGTATACTAGCGGAACTAC+TGG + chr5_1:4098111-4098130 Msa0712260:CDS 40.0%
TGGATATCAATACTCCCTTG+GGG - chr5_1:4098140-4098159 None:intergenic 40.0%
!!! AATTTTGCATAGGGAGTGCT+CGG - chr5_1:4098263-4098282 None:intergenic 40.0%
TCTCGCACACATCTTTGATA+GGG + chr5_1:4098460-4098479 Msa0712260:CDS 40.0%
CATCTTTGATAGGGTCATTG+AGG + chr5_1:4098469-4098488 Msa0712260:CDS 40.0%
GAGGAGACATTTATATGGCA+TGG + chr5_1:4098488-4098507 Msa0712260:CDS 40.0%
GAGACATTTATATGGCATGG+TGG + chr5_1:4098491-4098510 Msa0712260:CDS 40.0%
ATATGGCATGGTGGTTCAAT+AGG + chr5_1:4098500-4098519 Msa0712260:CDS 40.0%
ATCCAGACTTTAGGTACATG+TGG + chr5_1:4098630-4098649 Msa0712260:intron 40.0%
TGAGTGCGTAACACTACTTT+CGG + chr5_1:4099116-4099135 Msa0712260:intron 40.0%
!!! ATTTTTGACTTGTTGGGGCA+GGG - chr5_1:4099350-4099369 None:intergenic 40.0%
!!! AATTTTTGACTTGTTGGGGC+AGG - chr5_1:4099351-4099370 None:intergenic 40.0%
TGCCCCAACAAGTCAAAAAT+TGG + chr5_1:4099350-4099369 Msa0712260:intron 40.0%
!! CATTGTGCAAATGATGGACA+AGG - chr5_1:4099399-4099418 None:intergenic 40.0%
CTTGTCCATCATTTGCACAA+TGG + chr5_1:4099397-4099416 Msa0712260:intron 40.0%
TACACTCTATCAAGTACACG+GGG - chr5_1:4099489-4099508 None:intergenic 40.0%
GTACACTCTATCAAGTACAC+GGG - chr5_1:4099490-4099509 None:intergenic 40.0%
GTACTTGATAGAGTGTACTC+AGG + chr5_1:4099492-4099511 Msa0712260:CDS 40.0%
GATTCTCAACTTTGGTATGC+AGG + chr5_1:4099658-4099677 Msa0712260:intron 40.0%
ATTTCTGCGTGACTTGACAA+AGG - chr5_1:4099808-4099827 None:intergenic 40.0%
ATACAATGCTGTGAAACTGC+GGG - chr5_1:4100054-4100073 None:intergenic 40.0%
TAGGTGAAACAAGGTTTAGG+GGG + chr5_1:4100110-4100129 Msa0712260:intron 40.0%
GCATGTGGAAAGTTACTTAC+GGG + chr5_1:4100175-4100194 Msa0712260:CDS 40.0%
ACTTGTGCTCATGTCATACA+AGG + chr5_1:4100203-4100222 Msa0712260:CDS 40.0%
GCTCATGTCATACAAGGATA+TGG + chr5_1:4100209-4100228 Msa0712260:CDS 40.0%
ACTAGATATGCTTGGAACAG+TGG + chr5_1:4100612-4100631 Msa0712260:CDS 40.0%
CTAGATATGCTTGGAACAGT+GGG + chr5_1:4100613-4100632 Msa0712260:CDS 40.0%
CTGGAATCTGTTCCTGAAAT+GGG + chr5_1:4100664-4100683 Msa0712260:CDS 40.0%
!!! AAGGGTGATACCTTGTTTTC+GGG + chr5_1:4100730-4100749 Msa0712260:CDS 40.0%
TTTGTAGTACCCCGAAAACA+AGG - chr5_1:4100743-4100762 None:intergenic 40.0%
! ACAAAAGAGGTTCTGGTTGA+TGG + chr5_1:4100775-4100794 Msa0712260:CDS 40.0%
CTGCATGGTTTATTCAACAG+GGG + chr5_1:4100898-4100917 Msa0712260:intron 40.0%
GTTTATTCAACAGGGGACAT+TGG + chr5_1:4100905-4100924 Msa0712260:intron 40.0%
ATATGTTGCCGTTGAAAACC+TGG + chr5_1:4101000-4101019 Msa0712260:CDS 40.0%
AGGACACTAAAACCATTGGA+AGG - chr5_1:4101076-4101095 None:intergenic 40.0%
AGCTAGGACACTAAAACCAT+TGG - chr5_1:4101080-4101099 None:intergenic 40.0%
AAAACATCCAAGCCTAGAGA+TGG - chr5_1:4101335-4101354 None:intergenic 40.0%
TATTCCTCCTGTCTCAGATA+TGG + chr5_1:4101710-4101729 Msa0712260:intron 40.0%
ATTCCTCCTGTCTCAGATAT+GGG + chr5_1:4101711-4101730 Msa0712260:intron 40.0%
CTGTCTCAGATATGGGTTTA+CGG + chr5_1:4101718-4101737 Msa0712260:intron 40.0%
! GGTTTACGGAAACAGTTTTG+AGG + chr5_1:4101732-4101751 Msa0712260:CDS 40.0%
GTTAACAACAGCAACAAGGA+AGG - chr5_1:4101758-4101777 None:intergenic 40.0%
CAAACCAGCACTTGAACATT+GGG + chr5_1:4101783-4101802 Msa0712260:CDS 40.0%
GAACATTGGGCAGAAGAAAA+TGG + chr5_1:4101796-4101815 Msa0712260:CDS 40.0%
ACAGAGAGAATTGAAGTCCA+CGG - chr5_1:4101827-4101846 None:intergenic 40.0%
ATTCTCTCTGTGGAGATTCT+AGG + chr5_1:4101836-4101855 Msa0712260:CDS 40.0%
TTCTCTCTGTGGAGATTCTA+GGG + chr5_1:4101837-4101856 Msa0712260:CDS 40.0%
CTTGAAGAGCTCTCAAAGAT+TGG + chr5_1:4101874-4101893 Msa0712260:CDS 40.0%
AGAGCTCTCAAAGATTGGAA+AGG + chr5_1:4101879-4101898 Msa0712260:CDS 40.0%
AGCAAAAGGGGGTTACATTA+AGG + chr5_1:4102431-4102450 Msa0712260:intron 40.0%
GCAAAAGGGGGTTACATTAA+GGG + chr5_1:4102432-4102451 Msa0712260:intron 40.0%
TGACCCAGTTCCATTTGATA+TGG + chr5_1:4102676-4102695 Msa0712260:CDS 40.0%
CGTTCCATATCAAATGGAAC+TGG - chr5_1:4102683-4102702 None:intergenic 40.0%
AGGTCACGTTCCATATCAAA+TGG - chr5_1:4102689-4102708 None:intergenic 40.0%
GGCCTCTTCTTCTTATATGT+TGG - chr5_1:4102719-4102738 None:intergenic 40.0%
! AGTTTTCAGTATACGCTCAG+TGG - chr5_1:4102890-4102909 None:intergenic 40.0%
ACTGAGCGTATACTGAAAAC+TGG + chr5_1:4102889-4102908 Msa0712260:intron 40.0%
GCGTATACTGAAAACTGGTA+TGG + chr5_1:4102894-4102913 Msa0712260:intron 40.0%
TGATTGCGTCAACTAAGAGT+CGG + chr5_1:4102927-4102946 Msa0712260:intron 40.0%
GTAGTCACTTCACTTACACT+TGG + chr5_1:4103075-4103094 Msa0712260:intron 40.0%
TTGAAACTGAACACTCGACA+TGG + chr5_1:4103189-4103208 Msa0712260:intron 40.0%
ATCGATAGATCGTTGAGCCA+TGG + chr5_1:4092423-4092442 Msa0712260:exon 45.0%
! GATGAATCTTTTCTGCGCCA+TGG - chr5_1:4092443-4092462 None:intergenic 45.0%
CTATCAAGACCAGGAATAGG+AGG - chr5_1:4092556-4092575 None:intergenic 45.0%
!! TTCCTGGTCTTGATAGTTGC+TGG + chr5_1:4092560-4092579 Msa0712260:CDS 45.0%
!! TCCTGGTCTTGATAGTTGCT+GGG + chr5_1:4092561-4092580 Msa0712260:CDS 45.0%
TCGCAGATCACGACAAATAG+AGG + chr5_1:4093061-4093080 Msa0712260:intron 45.0%
CAATAAAATCTCAGCCTGGC+CGG + chr5_1:4093233-4093252 Msa0712260:intron 45.0%
TGGACGGGAAGGTAAAGTAT+TGG + chr5_1:4093558-4093577 Msa0712260:intron 45.0%
AACAGCATGGCAAGTACAAG+TGG + chr5_1:4093682-4093701 Msa0712260:intron 45.0%
!! TGCAGAGTGGATTATGAGCA+TGG + chr5_1:4094310-4094329 Msa0712260:CDS 45.0%
!! AGAGTGGATTATGAGCATGG+AGG + chr5_1:4094313-4094332 Msa0712260:CDS 45.0%
AGGCAGCAAGAGAAAGATTG+GGG - chr5_1:4094410-4094429 None:intergenic 45.0%
CAGGCAGCAAGAGAAAGATT+GGG - chr5_1:4094411-4094430 None:intergenic 45.0%
TCAGGCAGCAAGAGAAAGAT+TGG - chr5_1:4094412-4094431 None:intergenic 45.0%
TGTGGTTTCAATCCCTTACG+AGG + chr5_1:4094464-4094483 Msa0712260:intron 45.0%
TGTGATCCAACACATCTGTG+AGG + chr5_1:4094518-4094537 Msa0712260:intron 45.0%
ACAATGCCTCACAGATGTGT+TGG - chr5_1:4094527-4094546 None:intergenic 45.0%
AGGTTGAGGAAGAGACAAGA+GGG - chr5_1:4094754-4094773 None:intergenic 45.0%
AAGGTTGAGGAAGAGACAAG+AGG - chr5_1:4094755-4094774 None:intergenic 45.0%
GCTCCATTAAAGCCTATGAC+TGG - chr5_1:4094808-4094827 None:intergenic 45.0%
CATTCACATCCCCTCAAGTA+TGG + chr5_1:4094892-4094911 Msa0712260:intron 45.0%
TTAACGCCGTGAAAGCTCAA+GGG - chr5_1:4094964-4094983 None:intergenic 45.0%
TTTAACGCCGTGAAAGCTCA+AGG - chr5_1:4094965-4094984 None:intergenic 45.0%
CGACAGAAGAGCAAAGGAAA+GGG - chr5_1:4095310-4095329 None:intergenic 45.0%
ACGACAGAAGAGCAAAGGAA+AGG - chr5_1:4095311-4095330 None:intergenic 45.0%
! AGACACCGTTAACTTGAGAG+GGG + chr5_1:4095507-4095526 Msa0712260:intron 45.0%
CACTACCCCTCTCAAGTTAA+CGG - chr5_1:4095515-4095534 None:intergenic 45.0%
! GTGCTATTGAGTCAAACCTC+AGG + chr5_1:4095598-4095617 Msa0712260:intron 45.0%
GCTATTGAGTCAAACCTCAG+GGG + chr5_1:4095600-4095619 Msa0712260:intron 45.0%
!! CATCGAGTTGATTGCAGAGT+TGG - chr5_1:4095699-4095718 None:intergenic 45.0%
CAACTCTGCAATCAACTCGA+TGG + chr5_1:4095697-4095716 Msa0712260:intron 45.0%
AAATCAGATCCTGGAAGGTG+TGG - chr5_1:4095754-4095773 None:intergenic 45.0%
TAGTGCACGAACCGGTTAAT+AGG - chr5_1:4095810-4095829 None:intergenic 45.0%
ATTACAGGAGAGGTAAGGGA+AGG - chr5_1:4095853-4095872 None:intergenic 45.0%
TTGCCCAATAAGAGAGTGAG+TGG - chr5_1:4096971-4096990 None:intergenic 45.0%
!! GGCATTTATTTTCGGCGAAG+TGG - chr5_1:4097152-4097171 None:intergenic 45.0%
TGCAATTGAGACCTCTGCAT+GGG - chr5_1:4097286-4097305 None:intergenic 45.0%
ATGCAATTGAGACCTCTGCA+TGG - chr5_1:4097287-4097306 None:intergenic 45.0%
TTGGGAAGGATCAGAGAGTT+GGG + chr5_1:4097373-4097392 Msa0712260:intron 45.0%
AGCAATTGTGAGCTTCGGAA+AGG + chr5_1:4097570-4097589 Msa0712260:intron 45.0%
CTAAGTACTACTGGGATGTG+TGG + chr5_1:4097797-4097816 Msa0712260:intron 45.0%
AAACTCTGACTTTCACCCTG+TGG - chr5_1:4098051-4098070 None:intergenic 45.0%
CTATCAAAGATGTGTGCGAG+AGG - chr5_1:4098461-4098480 None:intergenic 45.0%
CTCTCGCACACATCTTTGAT+AGG + chr5_1:4098459-4098478 Msa0712260:CDS 45.0%
ATGGTGGTTCAATAGGCTTC+TGG + chr5_1:4098507-4098526 Msa0712260:CDS 45.0%
CTCCACATGTACCTAAAGTC+TGG - chr5_1:4098635-4098654 None:intergenic 45.0%
ACACGTTCAACACTTGCAGT+TGG + chr5_1:4098939-4098958 Msa0712260:intron 45.0%
! TCAACACTTGCAGTTGGTAC+CGG + chr5_1:4098945-4098964 Msa0712260:intron 45.0%
!!! TTTTTGACTTGTTGGGGCAG+GGG - chr5_1:4099349-4099368 None:intergenic 45.0%
TGCAGCCATTGTGCAAATGA+TGG - chr5_1:4099405-4099424 None:intergenic 45.0%
ATCATTTGCACAATGGCTGC+AGG + chr5_1:4099404-4099423 Msa0712260:intron 45.0%
GGTACCGCACAGAAAATAGT+TGG - chr5_1:4099468-4099487 None:intergenic 45.0%
GGTGGCAGCTCAGAAAAATA+GGG - chr5_1:4099605-4099624 None:intergenic 45.0%
! TTCTAGCTGGAAAAAAGGGG+TGG - chr5_1:4099623-4099642 None:intergenic 45.0%
CTTTCCACATGCAAGGATAG+AGG - chr5_1:4100167-4100186 None:intergenic 45.0%
TGTGGAAAGTTACTTACGGG+TGG + chr5_1:4100178-4100197 Msa0712260:CDS 45.0%
CCATTTCAGGAACAGATTCC+AGG - chr5_1:4100666-4100685 None:intergenic 45.0%
CCTGGAATCTGTTCCTGAAA+TGG + chr5_1:4100663-4100682 Msa0712260:CDS 45.0%
!!! AGGGTGATACCTTGTTTTCG+GGG + chr5_1:4100731-4100750 Msa0712260:CDS 45.0%
ACGTGAAGACCTCACAAAAG+AGG + chr5_1:4100762-4100781 Msa0712260:CDS 45.0%
AGACCTCACAAAAGAGGTTC+TGG + chr5_1:4100768-4100787 Msa0712260:CDS 45.0%
! CAACCAGAACCTCTTTTGTG+AGG - chr5_1:4100774-4100793 None:intergenic 45.0%
!! AAGAGGTTCTGGTTGATGGA+TGG + chr5_1:4100779-4100798 Msa0712260:CDS 45.0%
! GTTGATGGATGGTTCCATAC+AGG + chr5_1:4100790-4100809 Msa0712260:CDS 45.0%
ATTGGAGAGTGGCAACCTAA+TGG + chr5_1:4100923-4100942 Msa0712260:CDS 45.0%
TGTCTTGAGAGTCCTTCCAA+TGG + chr5_1:4101061-4101080 Msa0712260:intron 45.0%
TATAGGAACTGTGCCCTTGA+TGG + chr5_1:4101191-4101210 Msa0712260:intron 45.0%
ATAGGAACTGTGCCCTTGAT+GGG + chr5_1:4101192-4101211 Msa0712260:intron 45.0%
ATTTGTCCCAAGCCCATCAA+GGG - chr5_1:4101207-4101226 None:intergenic 45.0%
!! TTGATGGGCTTGGGACAAAT+GGG + chr5_1:4101207-4101226 Msa0712260:intron 45.0%
ACGACTGCACATAGGACTAT+GGG - chr5_1:4101465-4101484 None:intergenic 45.0%
! AAACCCATATCTGAGACAGG+AGG - chr5_1:4101717-4101736 None:intergenic 45.0%
! CGTAAACCCATATCTGAGAC+AGG - chr5_1:4101720-4101739 None:intergenic 45.0%
TGGGGTTAACAACAGCAACA+AGG - chr5_1:4101762-4101781 None:intergenic 45.0%
!! TGTTCAAGTGCTGGTTTGCT+GGG - chr5_1:4101781-4101800 None:intergenic 45.0%
!! ATGTTCAAGTGCTGGTTTGC+TGG - chr5_1:4101782-4101801 None:intergenic 45.0%
GCAAACCAGCACTTGAACAT+TGG + chr5_1:4101782-4101801 Msa0712260:CDS 45.0%
GTGGACTTCAATTCTCTCTG+TGG + chr5_1:4101826-4101845 Msa0712260:CDS 45.0%
AAGGGGGTTACATTAAGGGA+CGG + chr5_1:4102436-4102455 Msa0712260:intron 45.0%
CAAATGGAACTGGGTCAAGA+TGG - chr5_1:4102673-4102692 None:intergenic 45.0%
!! AAAAGCATTTCTCAGGCACG+GGG - chr5_1:4103451-4103470 None:intergenic 45.0%
!! CAAAAGCATTTCTCAGGCAC+GGG - chr5_1:4103452-4103471 None:intergenic 45.0%
!! CCAAAAGCATTTCTCAGGCA+CGG - chr5_1:4103453-4103472 None:intergenic 45.0%
!! CAGCTCCAAAAGCATTTCTC+AGG - chr5_1:4103458-4103477 None:intergenic 45.0%
!!! CTGAGAAATGCTTTTGGAGC+TGG + chr5_1:4103456-4103475 Msa0712260:exon 45.0%
TCGGAGGTGACGAAAACAAT+TGG - chr5_1:4103641-4103660 None:intergenic 45.0%
!!! TTTTTTTTTTATCAAATATA+AGG - chr5_1:4096649-4096668 None:intergenic 5.0%
AACGTGCTCAGCGTAATTGC+TGG - chr5_1:4092233-4092252 None:intergenic 50.0%
ATGGAGTGAGCCAGAGTGTA+GGG - chr5_1:4092280-4092299 None:intergenic 50.0%
! GGTTTTCCTCCTCCTATTCC+TGG + chr5_1:4092544-4092563 Msa0712260:CDS 50.0%
TCAAGACCAGGAATAGGAGG+AGG - chr5_1:4092553-4092572 None:intergenic 50.0%
TCCCAGCAACTATCAAGACC+AGG - chr5_1:4092565-4092584 None:intergenic 50.0%
! CGGCCAGGCTGAGATTTTAT+TGG - chr5_1:4093235-4093254 None:intergenic 50.0%
ACTCACCACCCCATGATTTC+CGG - chr5_1:4093255-4093274 None:intergenic 50.0%
ATCTCTCGGCTACCAAGCAT+AGG - chr5_1:4093536-4093555 None:intergenic 50.0%
ATCCATGACCGGTCAAGCTA+TGG - chr5_1:4093623-4093642 None:intergenic 50.0%
GGAAATTCTATCCGCAGCTG+TGG + chr5_1:4093744-4093763 Msa0712260:CDS 50.0%
TCTATCCGCAGCTGTGGTTA+TGG + chr5_1:4093750-4093769 Msa0712260:CDS 50.0%
CTTCTCCATAACCACAGCTG+CGG - chr5_1:4093758-4093777 None:intergenic 50.0%
! ATGGTGCCAATTCTGCAGAG+TGG + chr5_1:4094297-4094316 Msa0712260:CDS 50.0%
! ATGGGAGGCATGAGTCAATC+AGG - chr5_1:4094430-4094449 None:intergenic 50.0%
TGACTCATGCCTCCCATTGA+AGG + chr5_1:4094433-4094452 Msa0712260:intron 50.0%
GTTGGACACATTGGATCGGA+CGG - chr5_1:4094726-4094745 None:intergenic 50.0%
TAACGCCGTGAAAGCTCAAG+GGG - chr5_1:4094963-4094982 None:intergenic 50.0%
ATTGAGTCAAACCTCAGGGG+AGG + chr5_1:4095603-4095622 Msa0712260:intron 50.0%
CAAAGTTGGAGCCTTGGAGA+AGG - chr5_1:4095730-4095749 None:intergenic 50.0%
TGTGGACAAAGTTGGAGCCT+TGG - chr5_1:4095736-4095755 None:intergenic 50.0%
! CTGGAAGGTGTGGACAAAGT+TGG - chr5_1:4095744-4095763 None:intergenic 50.0%
CAACTTTGTCCACACCTTCC+AGG + chr5_1:4095742-4095761 Msa0712260:intron 50.0%
CAGACGTATAGTGCACGAAC+CGG - chr5_1:4095818-4095837 None:intergenic 50.0%
TTGCAGGCTTGCAATGCTCA+TGG + chr5_1:4096236-4096255 Msa0712260:intron 50.0%
TCATTGTGGGGCTCACACTA+TGG + chr5_1:4096993-4097012 Msa0712260:intron 50.0%
TGGGGCTCACACTATGGAAA+TGG + chr5_1:4096999-4097018 Msa0712260:intron 50.0%
GGGGCTCACACTATGGAAAT+GGG + chr5_1:4097000-4097019 Msa0712260:intron 50.0%
! ATAAAGTGGTGGGACCCATG+TGG + chr5_1:4097029-4097048 Msa0712260:intron 50.0%
GTTGGGAAGGATCAGAGAGT+TGG + chr5_1:4097372-4097391 Msa0712260:intron 50.0%
AGCTGGTGTGAAGCGGTTAT+TGG + chr5_1:4098182-4098201 Msa0712260:CDS 50.0%
CAAAGATGTGTGCGAGAGGA+AGG - chr5_1:4098457-4098476 None:intergenic 50.0%
GTTCAATAGGCTTCTGGCGT+GGG + chr5_1:4098513-4098532 Msa0712260:CDS 50.0%
TTCAATAGGCTTCTGGCGTG+GGG + chr5_1:4098514-4098533 Msa0712260:CDS 50.0%
TTATCACCCCAACACAGGGA+CGG + chr5_1:4098607-4098626 Msa0712260:intron 50.0%
!! GAAGTTGGCTTTGCTCTTGC+CGG - chr5_1:4098967-4098986 None:intergenic 50.0%
GGGTGGCAGCTCAGAAAAAT+AGG - chr5_1:4099606-4099625 None:intergenic 50.0%
AGCACCTCTATCCTTGCATG+TGG + chr5_1:4100160-4100179 Msa0712260:CDS 50.0%
AGGTCTGACTGAAACCTGTG+CGG + chr5_1:4100564-4100583 Msa0712260:intron 50.0%
GCATCCACATTTGGTACAGG+AGG - chr5_1:4100640-4100659 None:intergenic 50.0%
CACGCATCCACATTTGGTAC+AGG - chr5_1:4100643-4100662 None:intergenic 50.0%
!! AGGGCATCGTAACCCATTTC+AGG - chr5_1:4100679-4100698 None:intergenic 50.0%
! TCCTCTTGGTGTGCTTGCAA+GGG - chr5_1:4100698-4100717 None:intergenic 50.0%
CATTTGTCCCAAGCCCATCA+AGG - chr5_1:4101208-4101227 None:intergenic 50.0%
!! CTTGATGGGCTTGGGACAAA+TGG + chr5_1:4101206-4101225 Msa0712260:intron 50.0%
!! TGATGGGCTTGGGACAAATG+GGG + chr5_1:4101208-4101227 Msa0712260:intron 50.0%
CACGACTGCACATAGGACTA+TGG - chr5_1:4101466-4101485 None:intergenic 50.0%
ATCTGTGCACGACTGCACAT+AGG - chr5_1:4101473-4101492 None:intergenic 50.0%
!! GTTCAAGTGCTGGTTTGCTG+GGG - chr5_1:4101780-4101799 None:intergenic 50.0%
TCTGCCCAATGTTCAAGTGC+TGG - chr5_1:4101790-4101809 None:intergenic 50.0%
GGGTTACATTAAGGGACGGA+GGG + chr5_1:4102440-4102459 Msa0712260:intron 50.0%
! CCGTGCCTGAGAAATGCTTT+TGG + chr5_1:4103450-4103469 Msa0712260:exon 50.0%
CCAGAGTGTAGGGTAGGGTA+GGG - chr5_1:4092270-4092289 None:intergenic 55.0%
GTGAGCCAGAGTGTAGGGTA+GGG - chr5_1:4092275-4092294 None:intergenic 55.0%
AGTGAGCCAGAGTGTAGGGT+AGG - chr5_1:4092276-4092295 None:intergenic 55.0%
GATGGAGTGAGCCAGAGTGT+AGG - chr5_1:4092281-4092300 None:intergenic 55.0%
CGATACGCAGGTCCTCTTGA+AGG - chr5_1:4092505-4092524 None:intergenic 55.0%
GCGAAGATGCTACGATACGC+AGG - chr5_1:4092517-4092536 None:intergenic 55.0%
TCAGCCTGGCCGGAAATCAT+GGG + chr5_1:4093243-4093262 Msa0712260:intron 55.0%
! GCTTGGTAGCCGAGAGATTG+TGG + chr5_1:4093538-4093557 Msa0712260:CDS 55.0%
GGTAGCCGAGAGATTGTGGA+CGG + chr5_1:4093542-4093561 Msa0712260:CDS 55.0%
GTAGCCGAGAGATTGTGGAC+GGG + chr5_1:4093543-4093562 Msa0712260:CDS 55.0%
CCTTCCCGTCCACAATCTCT+CGG - chr5_1:4093550-4093569 None:intergenic 55.0%
TGCCATAGCTTGACCGGTCA+TGG + chr5_1:4093618-4093637 Msa0712260:intron 55.0%
GCAAGCTGGAGTCCTTCAAG+AGG - chr5_1:4094669-4094688 None:intergenic 55.0%
! ATTGGATCGGACGGACTCAG+TGG - chr5_1:4094717-4094736 None:intergenic 55.0%
GAGGCTTCGCAACCAGTCAT+AGG + chr5_1:4094793-4094812 Msa0712260:intron 55.0%
CAACCCCCCTTGAGCTTTCA+CGG + chr5_1:4094955-4094974 Msa0712260:intron 55.0%
AACGCCGTGAAAGCTCAAGG+GGG - chr5_1:4094962-4094981 None:intergenic 55.0%
AGTTACACTCACCTCCCCTG+AGG - chr5_1:4095617-4095636 None:intergenic 55.0%
! GTGCTGTTAGTGAGCATCCC+TGG + chr5_1:4096139-4096158 Msa0712260:intron 55.0%
AGGGGACTCAGAGCAGTTGT+AGG - chr5_1:4097761-4097780 None:intergenic 55.0%
GGAACTACTGGTGACCCCAA+GGG + chr5_1:4098123-4098142 Msa0712260:CDS 55.0%
CCGCTTCACACCAGCTAAGA+GGG - chr5_1:4098178-4098197 None:intergenic 55.0%
CCCTCTTAGCTGGTGTGAAG+CGG + chr5_1:4098175-4098194 Msa0712260:CDS 55.0%
ACCGCTTCACACCAGCTAAG+AGG - chr5_1:4098179-4098198 None:intergenic 55.0%
GGTTCAATAGGCTTCTGGCG+TGG + chr5_1:4098512-4098531 Msa0712260:CDS 55.0%
TCTGGATCCGTCCCTGTGTT+GGG - chr5_1:4098617-4098636 None:intergenic 55.0%
CAGGGACGGATCCAGACTTT+AGG + chr5_1:4098621-4098640 Msa0712260:intron 55.0%
AGCTCCACATTGCCCCAACA+TGG + chr5_1:4099318-4099337 Msa0712260:intron 55.0%
GGATCCATGTTGGGGCAATG+TGG - chr5_1:4099325-4099344 None:intergenic 55.0%
GAAGTGGAGATGCTGCTGCA+TGG - chr5_1:4099974-4099993 None:intergenic 55.0%
AATGCTGTGAAACTGCGGGC+TGG - chr5_1:4100050-4100069 None:intergenic 55.0%
GGTCTGACTGAAACCTGTGC+GGG + chr5_1:4100565-4100584 Msa0712260:intron 55.0%
TGAGACAAAGGTTCCCGCAC+AGG - chr5_1:4100581-4100600 None:intergenic 55.0%
GGGTCCTCCTGTACCAAATG+TGG + chr5_1:4100633-4100652 Msa0712260:CDS 55.0%
ACCAAATGTGGATGCGTGCC+TGG + chr5_1:4100645-4100664 Msa0712260:CDS 55.0%
TCCAGGCACGCATCCACATT+TGG - chr5_1:4100649-4100668 None:intergenic 55.0%
! CTCCTCTTGGTGTGCTTGCA+AGG - chr5_1:4100699-4100718 None:intergenic 55.0%
CAACAGGGGACATTGGAGAG+TGG + chr5_1:4100912-4100931 Msa0712260:intron 55.0%
!! AACTGTGCCCTTGATGGGCT+TGG + chr5_1:4101197-4101216 Msa0712260:intron 55.0%
!! ACTGTGCCCTTGATGGGCTT+GGG + chr5_1:4101198-4101217 Msa0712260:intron 55.0%
AGATGGCGTCTCTGCAAGTG+AGG - chr5_1:4101318-4101337 None:intergenic 55.0%
CTTGCAGAGACGCCATCTCT+AGG + chr5_1:4101320-4101339 Msa0712260:intron 55.0%
AGAGACGCCATCTCTAGGCT+TGG + chr5_1:4101325-4101344 Msa0712260:intron 55.0%
GGGCAACATACACATGCTGC+TGG - chr5_1:4101445-4101464 None:intergenic 55.0%
GTGCAGTCGTGCACAGATTC+TGG + chr5_1:4101475-4101494 Msa0712260:intron 55.0%
GGGGTTACATTAAGGGACGG+AGG + chr5_1:4102439-4102458 Msa0712260:intron 55.0%
CCCTACCCTACCCTACACTC+TGG + chr5_1:4092267-4092286 Msa0712260:five_prime_UTR 60.0%
GCCAGAGTGTAGGGTAGGGT+AGG - chr5_1:4092271-4092290 None:intergenic 60.0%
CTCAGCCTGGCCGGAAATCA+TGG + chr5_1:4093242-4093261 Msa0712260:intron 60.0%
CAGCCTGGCCGGAAATCATG+GGG + chr5_1:4093244-4093263 Msa0712260:intron 60.0%
CCGAGAGATTGTGGACGGGA+AGG + chr5_1:4093547-4093566 Msa0712260:CDS 60.0%
ACGCCGTGAAAGCTCAAGGG+GGG - chr5_1:4094961-4094980 None:intergenic 60.0%
CGGAACTACTGGTGACCCCA+AGG + chr5_1:4098122-4098141 Msa0712260:CDS 60.0%
CTGGATCCGTCCCTGTGTTG+GGG - chr5_1:4098616-4098635 None:intergenic 60.0%
GTCTGGATCCGTCCCTGTGT+TGG - chr5_1:4098618-4098637 None:intergenic 60.0%
!! TTGACTTGTTGGGGCAGGGG+CGG - chr5_1:4099346-4099365 None:intergenic 60.0%
GCCCTTGCAAGCACACCAAG+AGG + chr5_1:4100694-4100713 Msa0712260:CDS 60.0%
CCACCCCATGATTTCCGGCC+AGG - chr5_1:4093250-4093269 None:intergenic 65.0%
CCTGGCCGGAAATCATGGGG+TGG + chr5_1:4093247-4093266 Msa0712260:intron 65.0%
! GGATCGGACGGACTCAGTGG+AGG - chr5_1:4094714-4094733 None:intergenic 65.0%
GCAGGGGCGGATCCATGTTG+GGG - chr5_1:4099333-4099352 None:intergenic 65.0%
GGCAGGGGCGGATCCATGTT+GGG - chr5_1:4099334-4099353 None:intergenic 65.0%
GGGCAGGGGCGGATCCATGT+TGG - chr5_1:4099335-4099354 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 4092185 4103770 4092185 ID=Msa0712260;Name=Msa0712260
chr5_1 mRNA 4092185 4103770 4092185 ID=Msa0712260-mRNA-1;Parent=Msa0712260;Name=Msa0712260-mRNA-1;_AED=0.16;_eAED=0.16;_QI=257|1|1|1|1|1|19|311|662
chr5_1 exon 4092185 4092593 4092185 ID=Msa0712260-mRNA-1:exon:1610;Parent=Msa0712260-mRNA-1
chr5_1 exon 4093505 4093568 4093505 ID=Msa0712260-mRNA-1:exon:1611;Parent=Msa0712260-mRNA-1
chr5_1 exon 4093687 4093776 4093687 ID=Msa0712260-mRNA-1:exon:1612;Parent=Msa0712260-mRNA-1
chr5_1 exon 4094278 4094334 4094278 ID=Msa0712260-mRNA-1:exon:1613;Parent=Msa0712260-mRNA-1
chr5_1 exon 4096242 4096290 4096242 ID=Msa0712260-mRNA-1:exon:1614;Parent=Msa0712260-mRNA-1
chr5_1 exon 4097256 4097332 4097256 ID=Msa0712260-mRNA-1:exon:1615;Parent=Msa0712260-mRNA-1
chr5_1 exon 4097452 4097491 4097452 ID=Msa0712260-mRNA-1:exon:1616;Parent=Msa0712260-mRNA-1
chr5_1 exon 4097572 4097666 4097572 ID=Msa0712260-mRNA-1:exon:1617;Parent=Msa0712260-mRNA-1
chr5_1 exon 4098054 4098221 4098054 ID=Msa0712260-mRNA-1:exon:1618;Parent=Msa0712260-mRNA-1
chr5_1 exon 4098425 4098535 4098425 ID=Msa0712260-mRNA-1:exon:1619;Parent=Msa0712260-mRNA-1
chr5_1 exon 4099426 4099513 4099426 ID=Msa0712260-mRNA-1:exon:1620;Parent=Msa0712260-mRNA-1
chr5_1 exon 4099680 4099746 4099680 ID=Msa0712260-mRNA-1:exon:1621;Parent=Msa0712260-mRNA-1
chr5_1 exon 4099941 4100016 4099941 ID=Msa0712260-mRNA-1:exon:1622;Parent=Msa0712260-mRNA-1
chr5_1 exon 4100113 4100230 4100113 ID=Msa0712260-mRNA-1:exon:1623;Parent=Msa0712260-mRNA-1
chr5_1 exon 4100566 4100811 4100566 ID=Msa0712260-mRNA-1:exon:1624;Parent=Msa0712260-mRNA-1
chr5_1 exon 4100918 4101057 4100918 ID=Msa0712260-mRNA-1:exon:1625;Parent=Msa0712260-mRNA-1
chr5_1 exon 4101727 4101909 4101727 ID=Msa0712260-mRNA-1:exon:1626;Parent=Msa0712260-mRNA-1
chr5_1 exon 4102641 4102760 4102641 ID=Msa0712260-mRNA-1:exon:1627;Parent=Msa0712260-mRNA-1
chr5_1 exon 4103412 4103770 4103412 ID=Msa0712260-mRNA-1:exon:1628;Parent=Msa0712260-mRNA-1
chr5_1 five_prime_UTR 4092185 4092441 4092185 ID=Msa0712260-mRNA-1:five_prime_utr;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4092442 4092593 4092442 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4093505 4093568 4093505 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4093687 4093776 4093687 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4094278 4094334 4094278 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4096242 4096290 4096242 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4097256 4097332 4097256 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4097452 4097491 4097452 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4097572 4097666 4097572 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4098054 4098221 4098054 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4098425 4098535 4098425 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4099426 4099513 4099426 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4099680 4099746 4099680 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4099941 4100016 4099941 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4100113 4100230 4100113 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4100566 4100811 4100566 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4100918 4101057 4100918 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4101727 4101909 4101727 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4102641 4102760 4102641 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 CDS 4103412 4103459 4103412 ID=Msa0712260-mRNA-1:cds;Parent=Msa0712260-mRNA-1
chr5_1 three_prime_UTR 4103460 4103770 4103460 ID=Msa0712260-mRNA-1:three_prime_utr;Parent=Msa0712260-mRNA-1
Gene Sequence

>Msa0712260

ATGGCGCAGAAAAGATTCATCATTGAGGTTGAAAAAGCGAAGGAAGCTACCGAAGATAAACCTTCAAGAGGACCTGCGTATCGTAGCATCTTCGCTAAAAATGGTTTTCCTCCTCCTATTCCTGGTCTTGATAGTTGCTGGGATGTTTTTCGATTGTCCGTTGAGAAATATCCAAATAATCCTATGCTTGGTAGCCGAGAGATTGTGGACGGGAAGCATGGCAAGTACAAGTGGCAAACTTACAAAGAAGTATATGACATGGTGATCAAAGTCGGAAATTCTATCCGCAGCTGTGGTTATGGAGAAGGTGTAAAATGTGGTATTTATGGTGCCAATTCTGCAGAGTGGATTATGAGCATGGAGGCTTGCAATGCTCATGGACTTCATTGTGTTCCTTTATATGATACCTTAGGTTCTGGGGCCATAGAATTTATTATATCCCATGCAGAGGTCTCAATTGCATTTGCAGAAGAAAAGAAGATACCTGAGCTATTGAAGACATTTCCAAATGCAACCAAATATCTCAAGACAATTGTGAGCTTCGGAAAGGTTACCCTTGAACAAAAGCAAGAAGTTGAAAAGTTTGGATTGGCAATATATTCATGGACTGAATTTTTACAATTGGGTGAAAGTCAGAGTTTTGATTTACCTGTAAAGAAAAGAAGCGATATCTGTACAATAATGTATACTAGCGGAACTACTGGTGACCCCAAGGGAGTATTGATATCCAATGAGAGTATTATTACCCTCTTAGCTGGTGTGAAGCGGTTATTGGAGAGTGTCAATGAAAAATTGACTGAGAAGGATGTGTACTTATCATACCTTCCTCTCGCACACATCTTTGATAGGGTCATTGAGGAGACATTTATATGGCATGGTGGTTCAATAGGCTTCTGGCGTGGGGATGTTAAATTATTAATTGAAGATCTCGGGGAGCTAAAACCAACTATTTTCTGTGCGGTACCCCGTGTACTTGATAGAGTGTACTCAGGTTTGACACAGAAAATTTCTTCTGGAGGCTTCCTGAAGAAGACATTATTCAACTTTGCTTATTCATATAAGTTGAATAACATGAAGAAAGGACAAAGCCATGCAGCAGCATCTCCACTTCTTGACAAAGTTGTGTTCGATAAGGTGAAACAAGGTTTAGGGGGTAGTGTACGTCTTATTTTGTCTGGAGCAGCACCTCTATCCTTGCATGTGGAAAGTTACTTACGGGTGGTGACTTGTGCTCATGTCATACAAGGATATGGTCTGACTGAAACCTGTGCGGGAACCTTTGTCTCATTACCAAATGAACTAGATATGCTTGGAACAGTGGGTCCTCCTGTACCAAATGTGGATGCGTGCCTGGAATCTGTTCCTGAAATGGGTTACGATGCCCTTGCAAGCACACCAAGAGGAGAAATTTGTGTAAAGGGTGATACCTTGTTTTCGGGGTACTACAAACGTGAAGACCTCACAAAAGAGGTTCTGGTTGATGGATGGTTCCATACAGGGGACATTGGAGAGTGGCAACCTAATGGAAGTATGAAGATTATTGACCGGAAGAAGAATATATTCAAGCTTTCACAAGGAGAATATGTTGCCGTTGAAAACCTGGAGAATATTTATAGCCAAGTTACTTCTGTTGAATCTATATGGGTTTACGGAAACAGTTTTGAGGCCTTCCTTGTTGCTGTTGTTAACCCCAGCAAACCAGCACTTGAACATTGGGCAGAAGAAAATGGTATATCCGTGGACTTCAATTCTCTCTGTGGAGATTCTAGGGCAAAAAGTTACATACTTGAAGAGCTCTCAAAGATTGGAAAGGAAAAGAAGTTGAAAGGATTTGAGTTCATAAAAGCAGTCCATCTTGACCCAGTTCCATTTGATATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCTCAGTTGCTGAAATACTATCAGAACGTTATCGATGACATGTACAAAAGTGGAAATAAACCCCGTGCCTGA
Protein sequence

>Msa0712260

MAQKRFIIEVEKAKEATEDKPSRGPAYRSIFAKNGFPPPIPGLDSCWDVFRLSVEKYPNNPMLGSREIVDGKHGKYKWQTYKEVYDMVIKVGNSIRSCGYGEGVKCGIYGANSAEWIMSMEACNAHGLHCVPLYDTLGSGAIEFIISHAEVSIAFAEEKKIPELLKTFPNATKYLKTIVSFGKVTLEQKQEVEKFGLAIYSWTEFLQLGESQSFDLPVKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEKLTEKDVYLSYLPLAHIFDRVIEETFIWHGGSIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLTQKISSGGFLKKTLFNFAYSYKLNNMKKGQSHAAASPLLDKVVFDKVKQGLGGSVRLILSGAAPLSLHVESYLRVVTCAHVIQGYGLTETCAGTFVSLPNELDMLGTVGPPVPNVDACLESVPEMGYDALASTPRGEICVKGDTLFSGYYKREDLTKEVLVDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYSQVTSVESIWVYGNSFEAFLVAVVNPSKPALEHWAEENGISVDFNSLCGDSRAKSYILEELSKIGKEKKLKGFEFIKAVHLDPVPFDMERDLITPTYKKKRPQLLKYYQNVIDDMYKSGNKPRA*