Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123360 | sp|Q9LII8|KLCR2_ARATH | 29.981 | 527 | 347 | 11 | 91 | 603 | 143 | 661 | 3.69e-51 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123360 | A0A072VMA4 | 96.721 | 610 | 20 | 0 | 1 | 610 | 1 | 610 | 0.0 | 1211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0123360 | 0.807658 | 4.538812e-50 | -8.615850e-47 |
| Msa0003890 | Msa0123360 | 0.821316 | 4.308056e-53 | -8.615850e-47 |
| Msa0006070 | Msa0123360 | 0.820374 | 7.092994e-53 | -8.615850e-47 |
| Msa0011960 | Msa0123360 | 0.866198 | 3.398057e-65 | -8.615850e-47 |
| Msa0015610 | Msa0123360 | 0.804956 | 1.684243e-49 | -8.615850e-47 |
| Msa0025730 | Msa0123360 | 0.824503 | 7.790498e-54 | -8.615850e-47 |
| Msa0027770 | Msa0123360 | 0.910816 | 1.226105e-82 | -8.615850e-47 |
| Msa0029270 | Msa0123360 | 0.802145 | 6.444606e-49 | -8.615850e-47 |
| Msa0032090 | Msa0123360 | 0.807517 | 4.862612e-50 | -8.615850e-47 |
| Msa0032430 | Msa0123360 | 0.813854 | 2.072794e-51 | -8.615850e-47 |
| Msa0032580 | Msa0123360 | 0.821798 | 3.333472e-53 | -8.615850e-47 |
| Msa0033110 | Msa0123360 | 0.811653 | 6.287597e-51 | -8.615850e-47 |
| Msa0033260 | Msa0123360 | 0.810087 | 1.372256e-50 | -8.615850e-47 |
| Msa0033950 | Msa0123360 | 0.840012 | 1.123197e-57 | -8.615850e-47 |
| Msa0034030 | Msa0123360 | 0.835449 | 1.667036e-56 | -8.615850e-47 |
| Msa0043660 | Msa0123360 | 0.821490 | 3.927495e-53 | -8.615850e-47 |
| Msa0048550 | Msa0123360 | 0.810416 | 1.165497e-50 | -8.615850e-47 |
| Msa0054440 | Msa0123360 | 0.856269 | 3.605896e-62 | -8.615850e-47 |
| Msa0054480 | Msa0123360 | 0.882910 | 7.008189e-71 | -8.615850e-47 |
| Msa0059040 | Msa0123360 | 0.808927 | 2.435323e-50 | -8.615850e-47 |
| Msa0059110 | Msa0123360 | 0.831807 | 1.354112e-55 | -8.615850e-47 |
| Msa0061080 | Msa0123360 | 0.851589 | 8.041292e-61 | -8.615850e-47 |
| Msa0063530 | Msa0123360 | 0.856668 | 2.752618e-62 | -8.615850e-47 |
| Msa0067630 | Msa0123360 | 0.812442 | 4.230525e-51 | -8.615850e-47 |
| Msa0070700 | Msa0123360 | 0.862198 | 6.003668e-64 | -8.615850e-47 |
| Msa0075500 | Msa0123360 | 0.892059 | 2.249148e-74 | -8.615850e-47 |
| Msa0078900 | Msa0123360 | 0.822797 | 1.954000e-53 | -8.615850e-47 |
| Msa0079380 | Msa0123360 | 0.806642 | 7.450718e-50 | -8.615850e-47 |
| Msa0090360 | Msa0123360 | 0.860208 | 2.423551e-63 | -8.615850e-47 |
| Msa0091410 | Msa0123360 | 0.806815 | 6.847822e-50 | -8.615850e-47 |
| Msa0101590 | Msa0123360 | 0.855621 | 5.578154e-62 | -8.615850e-47 |
| Msa0101700 | Msa0123360 | 0.830631 | 2.634058e-55 | -8.615850e-47 |
| Msa0105620 | Msa0123360 | 0.867910 | 9.656190e-66 | -8.615850e-47 |
| Msa0114060 | Msa0123360 | 0.813428 | 2.572850e-51 | -8.615850e-47 |
| Msa0115130 | Msa0123360 | 0.809814 | 1.571068e-50 | -8.615850e-47 |
| Msa0115400 | Msa0123360 | 0.841105 | 5.813016e-58 | -8.615850e-47 |
| Msa0118590 | Msa0123360 | 0.842498 | 2.492469e-58 | -8.615850e-47 |
| Msa0123360 | Msa0126610 | 0.816804 | 4.579374e-52 | -8.615850e-47 |
| Msa0123360 | Msa0127020 | 0.858292 | 9.104869e-63 | -8.615850e-47 |
| Msa0123360 | Msa0127050 | 0.808616 | 2.837869e-50 | -8.615850e-47 |
| Msa0123360 | Msa0136070 | 0.813344 | 2.684195e-51 | -8.615850e-47 |
| Msa0123360 | Msa0137550 | 0.840766 | 7.135228e-58 | -8.615850e-47 |
| Msa0123360 | Msa0137840 | 0.852798 | 3.643036e-61 | -8.615850e-47 |
| Msa0123360 | Msa0139350 | 0.853806 | 1.872505e-61 | -8.615850e-47 |
| Msa0123360 | Msa0144370 | 0.865605 | 5.230021e-65 | -8.615850e-47 |
| Msa0123360 | Msa0145440 | 0.854183 | 1.458836e-61 | -8.615850e-47 |
| Msa0123360 | Msa0150820 | 0.851266 | 9.923716e-61 | -8.615850e-47 |
| Msa0123360 | Msa0159170 | 0.876595 | 1.232697e-68 | -8.615850e-47 |
| Msa0123360 | Msa0160550 | 0.866831 | 2.137607e-65 | -8.615850e-47 |
| Msa0123360 | Msa0165660 | 0.815233 | 1.026746e-51 | -8.615850e-47 |
| Msa0123360 | Msa0168230 | 0.954209 | 4.945162e-112 | -8.615850e-47 |
| Msa0123360 | Msa0169280 | 0.859978 | 2.845183e-63 | -8.615850e-47 |
| Msa0123360 | Msa0169310 | 0.822608 | 2.162272e-53 | -8.615850e-47 |
| Msa0123360 | Msa0171540 | 0.841997 | 3.382714e-58 | -8.615850e-47 |
| Msa0123360 | Msa0172070 | 0.814945 | 1.189829e-51 | -8.615850e-47 |
| Msa0123360 | Msa0172970 | 0.812392 | 4.337723e-51 | -8.615850e-47 |
| Msa0123360 | Msa0179190 | 0.801826 | 7.494785e-49 | -8.615850e-47 |
| Msa0123360 | Msa0184040 | 0.857152 | 1.982515e-62 | -8.615850e-47 |
| Msa0123360 | Msa0184780 | 0.803529 | 3.338361e-49 | -8.615850e-47 |
| Msa0123360 | Msa0187120 | 0.846676 | 1.869779e-59 | -8.615850e-47 |
| Msa0123360 | Msa0189300 | 0.830858 | 2.318014e-55 | -8.615850e-47 |
| Msa0123360 | Msa0212930 | 0.808696 | 2.728056e-50 | -8.615850e-47 |
| Msa0123360 | Msa0220720 | 0.834836 | 2.379752e-56 | -8.615850e-47 |
| Msa0123360 | Msa0224810 | 0.836090 | 1.147311e-56 | -8.615850e-47 |
| Msa0123360 | Msa0228070 | 0.851800 | 7.010918e-61 | -8.615850e-47 |
| Msa0123360 | Msa0229170 | 0.805777 | 1.133094e-49 | -8.615850e-47 |
| Msa0123360 | Msa0241390 | 0.847840 | 8.965129e-60 | -8.615850e-47 |
| Msa0123360 | Msa0241470 | 0.829859 | 4.067021e-55 | -8.615850e-47 |
| Msa0123360 | Msa0241620 | 0.810062 | 1.389339e-50 | -8.615850e-47 |
| Msa0123360 | Msa0247550 | 0.803645 | 3.158009e-49 | -8.615850e-47 |
| Msa0123360 | Msa0253200 | 0.826426 | 2.730402e-54 | -8.615850e-47 |
| Msa0123360 | Msa0260680 | 0.821770 | 3.383367e-53 | -8.615850e-47 |
| Msa0123360 | Msa0264150 | 0.820674 | 6.054884e-53 | -8.615850e-47 |
| Msa0123360 | Msa0267310 | 0.810603 | 1.061778e-50 | -8.615850e-47 |
| Msa0123360 | Msa0267370 | 0.811988 | 5.315425e-51 | -8.615850e-47 |
| Msa0123360 | Msa0271530 | 0.837575 | 4.794627e-57 | -8.615850e-47 |
| Msa0123360 | Msa0279220 | 0.875853 | 2.220617e-68 | -8.615850e-47 |
| Msa0123360 | Msa0279240 | 0.865128 | 7.390680e-65 | -8.615850e-47 |
| Msa0123360 | Msa0279700 | 0.849031 | 4.197239e-60 | -8.615850e-47 |
| Msa0123360 | Msa0280090 | 0.816233 | 6.146924e-52 | -8.615850e-47 |
| Msa0123360 | Msa0289250 | 0.805463 | 1.318841e-49 | -8.615850e-47 |
| Msa0123360 | Msa0292030 | 0.830135 | 3.482463e-55 | -8.615850e-47 |
| Msa0123360 | Msa0299870 | 0.848328 | 6.574894e-60 | -8.615850e-47 |
| Msa0123360 | Msa0309750 | 0.841942 | 3.498636e-58 | -8.615850e-47 |
| Msa0123360 | Msa0309770 | 0.824802 | 6.624310e-54 | -8.615850e-47 |
| Msa0123360 | Msa0318980 | 0.884015 | 2.750405e-71 | -8.615850e-47 |
| Msa0123360 | Msa0325590 | 0.806362 | 8.534871e-50 | -8.615850e-47 |
| Msa0123360 | Msa0326110 | 0.806329 | 8.673139e-50 | -8.615850e-47 |
| Msa0123360 | Msa0330310 | 0.801695 | 7.973538e-49 | -8.615850e-47 |
| Msa0123360 | Msa0333730 | 0.801530 | 8.620792e-49 | -8.615850e-47 |
| Msa0123360 | Msa0336420 | 0.812518 | 4.072557e-51 | -8.615850e-47 |
| Msa0123360 | Msa0337240 | 0.825279 | 5.112328e-54 | -8.615850e-47 |
| Msa0123360 | Msa0337620 | 0.815627 | 8.389449e-52 | -8.615850e-47 |
| Msa0123360 | Msa0345350 | 0.800675 | 1.289620e-48 | -8.615850e-47 |
| Msa0123360 | Msa0351990 | 0.809273 | 2.052971e-50 | -8.615850e-47 |
| Msa0123360 | Msa0383800 | 0.841735 | 3.968997e-58 | -8.615850e-47 |
| Msa0123360 | Msa0385580 | 0.812709 | 3.698556e-51 | -8.615850e-47 |
| Msa0123360 | Msa0388700 | 0.877222 | 7.472837e-69 | -8.615850e-47 |
| Msa0123360 | Msa0397540 | 0.820900 | 5.372862e-53 | -8.615850e-47 |
| Msa0123360 | Msa0399340 | 0.818245 | 2.167189e-52 | -8.615850e-47 |
| Msa0123360 | Msa0402650 | 0.848698 | 5.193085e-60 | -8.615850e-47 |
| Msa0123360 | Msa0402790 | 0.844748 | 6.236555e-59 | -8.615850e-47 |
| Msa0123360 | Msa0407930 | 0.818797 | 1.625002e-52 | -8.615850e-47 |
| Msa0123360 | Msa0411430 | 0.839761 | 1.306186e-57 | -8.615850e-47 |
| Msa0123360 | Msa0412840 | 0.818846 | 1.583777e-52 | -8.615850e-47 |
| Msa0123360 | Msa0422400 | 0.813206 | 2.878161e-51 | -8.615850e-47 |
| Msa0123360 | Msa0422840 | 0.812545 | 4.017925e-51 | -8.615850e-47 |
| Msa0123360 | Msa0422920 | 0.814009 | 1.916652e-51 | -8.615850e-47 |
| Msa0123360 | Msa0428020 | 0.822929 | 1.821218e-53 | -8.615850e-47 |
| Msa0123360 | Msa0428060 | 0.827772 | 1.300948e-54 | -8.615850e-47 |
| Msa0123360 | Msa0428080 | 0.812050 | 5.153289e-51 | -8.615850e-47 |
| Msa0123360 | Msa0434180 | 0.829029 | 6.470675e-55 | -8.615850e-47 |
| Msa0123360 | Msa0436760 | 0.813813 | 2.116346e-51 | -8.615850e-47 |
| Msa0123360 | Msa0449210 | 0.834823 | 2.398938e-56 | -8.615850e-47 |
| Msa0123360 | Msa0457510 | 0.808026 | 3.791267e-50 | -8.615850e-47 |
| Msa0123360 | Msa0474400 | 0.827846 | 1.248660e-54 | -8.615850e-47 |
| Msa0123360 | Msa0481530 | 0.866531 | 2.663133e-65 | -8.615850e-47 |
| Msa0123360 | Msa0482130 | 0.870003 | 2.025518e-66 | -8.615850e-47 |
| Msa0123360 | Msa0483850 | 0.819433 | 1.164496e-52 | -8.615850e-47 |
| Msa0123360 | Msa0484720 | 0.822455 | 2.346898e-53 | -8.615850e-47 |
| Msa0123360 | Msa0487800 | 0.802164 | 6.389234e-49 | -8.615850e-47 |
| Msa0123360 | Msa0493410 | 0.850255 | 1.911407e-60 | -8.615850e-47 |
| Msa0123360 | Msa0497210 | 0.809635 | 1.716481e-50 | -8.615850e-47 |
| Msa0123360 | Msa0497490 | 0.836567 | 8.674961e-57 | -8.615850e-47 |
| Msa0123360 | Msa0501460 | 0.800635 | 1.314113e-48 | -8.615850e-47 |
| Msa0123360 | Msa0507440 | 0.800821 | 1.203895e-48 | -8.615850e-47 |
| Msa0123360 | Msa0510350 | 0.800490 | 1.406587e-48 | -8.615850e-47 |
| Msa0123360 | Msa0512750 | 0.812291 | 4.564970e-51 | -8.615850e-47 |
| Msa0123360 | Msa0519740 | 0.825788 | 3.872921e-54 | -8.615850e-47 |
| Msa0123360 | Msa0522070 | 0.812874 | 3.402909e-51 | -8.615850e-47 |
| Msa0123360 | Msa0529830 | 0.811642 | 6.320429e-51 | -8.615850e-47 |
| Msa0123360 | Msa0529890 | 0.870682 | 1.213102e-66 | -8.615850e-47 |
| Msa0123360 | Msa0542090 | 0.896750 | 2.734001e-76 | -8.615850e-47 |
| Msa0123360 | Msa0542130 | 0.896915 | 2.332073e-76 | -8.615850e-47 |
| Msa0123360 | Msa0548240 | 0.818093 | 2.346606e-52 | -8.615850e-47 |
| Msa0123360 | Msa0555450 | 0.839512 | 1.516346e-57 | -8.615850e-47 |
| Msa0123360 | Msa0561230 | 0.830206 | 3.346895e-55 | -8.615850e-47 |
| Msa0123360 | Msa0563840 | 0.800558 | 1.362021e-48 | -8.615850e-47 |
| Msa0123360 | Msa0566100 | 0.812972 | 3.239755e-51 | -8.615850e-47 |
| Msa0123360 | Msa0577500 | 0.804360 | 2.242488e-49 | -8.615850e-47 |
| Msa0123360 | Msa0580420 | 0.821611 | 3.683458e-53 | -8.615850e-47 |
| Msa0123360 | Msa0585510 | 0.814389 | 1.579276e-51 | -8.615850e-47 |
| Msa0123360 | Msa0585560 | 0.867132 | 1.713964e-65 | -8.615850e-47 |
| Msa0123360 | Msa0592440 | 0.817274 | 3.590826e-52 | -8.615850e-47 |
| Msa0123360 | Msa0601150 | 0.808583 | 2.884441e-50 | -8.615850e-47 |
| Msa0123360 | Msa0605000 | 0.822982 | 1.769878e-53 | -8.615850e-47 |
| Msa0123360 | Msa0607050 | 0.829061 | 6.354081e-55 | -8.615850e-47 |
| Msa0123360 | Msa0607910 | 0.814994 | 1.160393e-51 | -8.615850e-47 |
| Msa0123360 | Msa0610430 | 0.862433 | 5.086744e-64 | -8.615850e-47 |
| Msa0123360 | Msa0613440 | 0.811884 | 5.600083e-51 | -8.615850e-47 |
| Msa0123360 | Msa0615490 | 0.803467 | 3.438575e-49 | -8.615850e-47 |
| Msa0123360 | Msa0615710 | 0.801892 | 7.266172e-49 | -8.615850e-47 |
| Msa0123360 | Msa0617640 | 0.856268 | 3.609882e-62 | -8.615850e-47 |
| Msa0123360 | Msa0623720 | 0.826847 | 2.167350e-54 | -8.615850e-47 |
| Msa0123360 | Msa0623790 | 0.816540 | 5.246507e-52 | -8.615850e-47 |
| Msa0123360 | Msa0625680 | 0.815882 | 7.362902e-52 | -8.615850e-47 |
| Msa0123360 | Msa0625720 | 0.868330 | 7.073228e-66 | -8.615850e-47 |
| Msa0123360 | Msa0643060 | 0.804139 | 2.493436e-49 | -8.615850e-47 |
| Msa0123360 | Msa0643350 | 0.820146 | 8.003283e-53 | -8.615850e-47 |
| Msa0123360 | Msa0643560 | 0.825144 | 5.502452e-54 | -8.615850e-47 |
| Msa0123360 | Msa0649490 | 0.827772 | 1.300432e-54 | -8.615850e-47 |
| Msa0123360 | Msa0654720 | 0.821184 | 4.620124e-53 | -8.615850e-47 |
| Msa0123360 | Msa0660490 | 0.819389 | 1.191545e-52 | -8.615850e-47 |
| Msa0123360 | Msa0661650 | 0.817799 | 2.734453e-52 | -8.615850e-47 |
| Msa0123360 | Msa0663390 | 0.872437 | 3.182278e-67 | -8.615850e-47 |
| Msa0123360 | Msa0673460 | 0.814911 | 1.210383e-51 | -8.615850e-47 |
| Msa0123360 | Msa0683170 | 0.806594 | 7.625676e-50 | -8.615850e-47 |
| Msa0123360 | Msa0685140 | 0.873944 | 9.930686e-68 | -8.615850e-47 |
| Msa0123360 | Msa0689260 | 0.896182 | 4.715484e-76 | -8.615850e-47 |
| Msa0123360 | Msa0690150 | 0.807702 | 4.443501e-50 | -8.615850e-47 |
| Msa0123360 | Msa0690860 | 0.835584 | 1.541646e-56 | -8.615850e-47 |
| Msa0123360 | Msa0691290 | 0.806271 | 8.918508e-50 | -8.615850e-47 |
| Msa0123360 | Msa0692830 | 0.873722 | 1.179526e-67 | -8.615850e-47 |
| Msa0123360 | Msa0692950 | 0.867946 | 9.402019e-66 | -8.615850e-47 |
| Msa0123360 | Msa0696390 | 0.812793 | 3.545177e-51 | -8.615850e-47 |
| Msa0123360 | Msa0698360 | 0.808584 | 2.882369e-50 | -8.615850e-47 |
| Msa0123360 | Msa0698540 | 0.810427 | 1.158984e-50 | -8.615850e-47 |
| Msa0123360 | Msa0698800 | 0.823339 | 1.461249e-53 | -8.615850e-47 |
| Msa0123360 | Msa0702550 | 0.819244 | 1.285719e-52 | -8.615850e-47 |
| Msa0123360 | Msa0709040 | 0.801388 | 9.220214e-49 | -8.615850e-47 |
| Msa0123360 | Msa0709500 | 0.802109 | 6.557955e-49 | -8.615850e-47 |
| Msa0123360 | Msa0711780 | 0.893683 | 5.000541e-75 | -8.615850e-47 |
| Msa0123360 | Msa0715650 | 0.819200 | 1.316162e-52 | -8.615850e-47 |
| Msa0123360 | Msa0715700 | 0.894724 | 1.884451e-75 | -8.615850e-47 |
| Msa0123360 | Msa0727550 | 0.840112 | 1.057602e-57 | -8.615850e-47 |
| Msa0123360 | Msa0737560 | 0.805029 | 1.625820e-49 | -8.615850e-47 |
| Msa0123360 | Msa0740800 | 0.806892 | 6.597198e-50 | -8.615850e-47 |
| Msa0123360 | Msa0750890 | 0.821227 | 4.516675e-53 | -8.615850e-47 |
| Msa0123360 | Msa0754380 | 0.820494 | 6.659002e-53 | -8.615850e-47 |
| Msa0123360 | Msa0757830 | 0.807382 | 5.193548e-50 | -8.615850e-47 |
| Msa0123360 | Msa0762970 | 0.820589 | 6.333982e-53 | -8.615850e-47 |
| Msa0123360 | Msa0772480 | 0.821020 | 5.040495e-53 | -8.615850e-47 |
| Msa0123360 | Msa0788850 | 0.830192 | 3.372223e-55 | -8.615850e-47 |
| Msa0123360 | Msa0790660 | -0.816406 | 5.622238e-52 | -8.615850e-47 |
| Msa0123360 | Msa0790850 | 0.801534 | 8.604394e-49 | -8.615850e-47 |
| Msa0123360 | Msa0793800 | 0.853935 | 1.719177e-61 | -8.615850e-47 |
| Msa0123360 | Msa0794670 | 0.883215 | 5.418173e-71 | -8.615850e-47 |
| Msa0123360 | Msa0795920 | 0.819802 | 9.591410e-53 | -8.615850e-47 |
| Msa0123360 | Msa0798440 | 0.823419 | 1.399551e-53 | -8.615850e-47 |
| Msa0123360 | Msa0802830 | 0.822777 | 1.975342e-53 | -8.615850e-47 |
| Msa0123360 | Msa0808270 | 0.816063 | 6.706137e-52 | -8.615850e-47 |
| Msa0123360 | Msa0816700 | 0.823132 | 1.632687e-53 | -8.615850e-47 |
| Msa0123360 | Msa0827350 | -0.810494 | 1.121141e-50 | -8.615850e-47 |
| Msa0123360 | Msa0830540 | 0.870285 | 1.637334e-66 | -8.615850e-47 |
| Msa0123360 | Msa0831530 | 0.834751 | 2.500108e-56 | -8.615850e-47 |
| Msa0123360 | Msa0856910 | 0.816888 | 4.382966e-52 | -8.615850e-47 |
| Msa0123360 | Msa0858130 | 0.807128 | 5.881173e-50 | -8.615850e-47 |
| Msa0123360 | Msa0862530 | 0.820322 | 7.291543e-53 | -8.615850e-47 |
| Msa0123360 | Msa0866550 | 0.805512 | 1.288171e-49 | -8.615850e-47 |
| Msa0123360 | Msa0867220 | 0.871910 | 4.768291e-67 | -8.615850e-47 |
| Msa0123360 | Msa0871270 | 0.818186 | 2.235865e-52 | -8.615850e-47 |
| Msa0123360 | Msa0876810 | 0.833951 | 3.970381e-56 | -8.615850e-47 |
| Msa0123360 | Msa0897080 | 0.800399 | 1.467725e-48 | -8.615850e-47 |
| Msa0123360 | Msa0909110 | 0.801393 | 9.196710e-49 | -8.615850e-47 |
| Msa0123360 | Msa0909950 | 0.813118 | 3.009586e-51 | -8.615850e-47 |
| Msa0123360 | Msa0923330 | 0.806552 | 7.783449e-50 | -8.615850e-47 |
| Msa0123360 | Msa0923870 | 0.802441 | 5.601501e-49 | -8.615850e-47 |
| Msa0123360 | Msa0932570 | 0.802477 | 5.508525e-49 | -8.615850e-47 |
| Msa0123360 | Msa0938220 | 0.833570 | 4.942752e-56 | -8.615850e-47 |
| Msa0123360 | Msa0945440 | 0.872585 | 2.841413e-67 | -8.615850e-47 |
| Msa0123360 | Msa0947660 | 0.811563 | 6.576366e-51 | -8.615850e-47 |
| Msa0123360 | Msa0959360 | 0.805710 | 1.170501e-49 | -8.615850e-47 |
| Msa0123360 | Msa0965490 | 0.805155 | 1.530205e-49 | -8.615850e-47 |
| Msa0123360 | Msa0968680 | 0.815058 | 1.123129e-51 | -8.615850e-47 |
| Msa0123360 | Msa0969790 | 0.810314 | 1.225707e-50 | -8.615850e-47 |
| Msa0123360 | Msa0970530 | 0.820009 | 8.601736e-53 | -8.615850e-47 |
| Msa0123360 | Msa0974070 | 0.807698 | 4.451506e-50 | -8.615850e-47 |
| Msa0123360 | Msa0975340 | 0.802306 | 5.972546e-49 | -8.615850e-47 |
| Msa0123360 | Msa0987370 | 0.821717 | 3.480319e-53 | -8.615850e-47 |
| Msa0123360 | Msa0989540 | 0.855782 | 5.007183e-62 | -8.615850e-47 |
| Msa0123360 | Msa0999970 | 0.836297 | 1.016315e-56 | -8.615850e-47 |
| Msa0123360 | Msa1003620 | 0.818635 | 1.768940e-52 | -8.615850e-47 |
| Msa0123360 | Msa1009820 | 0.840353 | 9.149944e-58 | -8.615850e-47 |
| Msa0123360 | Msa1013400 | 0.802228 | 6.198347e-49 | -8.615850e-47 |
| Msa0123360 | Msa1014540 | 0.811732 | 6.042252e-51 | -8.615850e-47 |
| Msa0123360 | Msa1023120 | 0.864343 | 1.301449e-64 | -8.615850e-47 |
| Msa0123360 | Msa1046460 | 0.827758 | 1.311029e-54 | -8.615850e-47 |
| Msa0123360 | Msa1051200 | 0.875208 | 3.692278e-68 | -8.615850e-47 |
| Msa0123360 | Msa1061680 | 0.827219 | 1.765324e-54 | -8.615850e-47 |
| Msa0123360 | Msa1081930 | 0.816144 | 6.434359e-52 | -8.615850e-47 |
| Msa0123360 | Msa1082810 | 0.808035 | 3.774282e-50 | -8.615850e-47 |
| Msa0123360 | Msa1088640 | 0.823215 | 1.561338e-53 | -8.615850e-47 |
| Msa0123360 | Msa1093530 | 0.802853 | 4.607316e-49 | -8.615850e-47 |
| Msa0123360 | Msa1097920 | 0.813013 | 3.173348e-51 | -8.615850e-47 |
| Msa0123360 | Msa1100050 | 0.817931 | 2.552025e-52 | -8.615850e-47 |
| Msa0123360 | Msa1106700 | 0.814386 | 1.581571e-51 | -8.615850e-47 |
| Msa0123360 | Msa1107100 | 0.813407 | 2.599752e-51 | -8.615850e-47 |
| Msa0123360 | Msa1109680 | 0.820334 | 7.247938e-53 | -8.615850e-47 |
| Msa0123360 | Msa1122180 | 0.816963 | 4.217223e-52 | -8.615850e-47 |
| Msa0123360 | Msa1124960 | 0.803928 | 2.758555e-49 | -8.615850e-47 |
| Msa0123360 | Msa1128570 | 0.835843 | 1.324976e-56 | -8.615850e-47 |
| Msa0123360 | Msa1132890 | 0.805975 | 1.029800e-49 | -8.615850e-47 |
| Msa0123360 | Msa1135470 | 0.810622 | 1.051715e-50 | -8.615850e-47 |
| Msa0123360 | Msa1137700 | 0.854679 | 1.048485e-61 | -8.615850e-47 |
| Msa0123360 | Msa1150660 | 0.812342 | 4.449203e-51 | -8.615850e-47 |
| Msa0123360 | Msa1153060 | 0.835511 | 1.607836e-56 | -8.615850e-47 |
| Msa0123360 | Msa1154280 | 0.824809 | 6.600269e-54 | -8.615850e-47 |
| Msa0123360 | Msa1160590 | 0.886785 | 2.528361e-72 | -8.615850e-47 |
| Msa0123360 | Msa1162270 | 0.841534 | 4.484087e-58 | -8.615850e-47 |
| Msa0123360 | Msa1162780 | 0.822501 | 2.290634e-53 | -8.615850e-47 |
| Msa0123360 | Msa1165920 | 0.800867 | 1.178497e-48 | -8.615850e-47 |
| Msa0123360 | Msa1165940 | 0.800264 | 1.563464e-48 | -8.615850e-47 |
| Msa0123360 | Msa1174470 | 0.835513 | 1.605950e-56 | -8.615850e-47 |
| Msa0123360 | Msa1181250 | 0.881719 | 1.900482e-70 | -8.615850e-47 |
| Msa0123360 | Msa1181330 | 0.870175 | 1.779800e-66 | -8.615850e-47 |
| Msa0123360 | Msa1181910 | 0.839110 | 1.927898e-57 | -8.615850e-47 |
| Msa0123360 | Msa1186950 | -0.827457 | 1.548377e-54 | -8.615850e-47 |
| Msa0123360 | Msa1204530 | 0.813120 | 3.005480e-51 | -8.615850e-47 |
| Msa0123360 | Msa1204630 | 0.803205 | 3.896283e-49 | -8.615850e-47 |
| Msa0123360 | Msa1208880 | 0.885879 | 5.557024e-72 | -8.615850e-47 |
| Msa0123360 | Msa1209200 | 0.808848 | 2.531489e-50 | -8.615850e-47 |
| Msa0123360 | Msa1209260 | 0.846785 | 1.745821e-59 | -8.615850e-47 |
| Msa0123360 | Msa1209760 | 0.834849 | 2.362382e-56 | -8.615850e-47 |
| Msa0123360 | Msa1211890 | 0.825887 | 3.668397e-54 | -8.615850e-47 |
| Msa0123360 | Msa1217470 | 0.813328 | 2.705717e-51 | -8.615850e-47 |
| Msa0123360 | Msa1224810 | 0.860066 | 2.675758e-63 | -8.615850e-47 |
| Msa0123360 | Msa1228590 | 0.815950 | 7.109940e-52 | -8.615850e-47 |
| Msa0123360 | Msa1237630 | 0.847215 | 1.331123e-59 | -8.615850e-47 |
| Msa0123360 | Msa1237700 | 0.810873 | 9.281490e-51 | -8.615850e-47 |
| Msa0123360 | Msa1245930 | 0.887224 | 1.720934e-72 | -8.615850e-47 |
| Msa0123360 | Msa1253020 | 0.807797 | 4.240368e-50 | -8.615850e-47 |
| Msa0123360 | Msa1253800 | 0.819102 | 1.385323e-52 | -8.615850e-47 |
| Msa0123360 | Msa1259060 | 0.890800 | 7.100260e-74 | -8.615850e-47 |
| Msa0123360 | Msa1259490 | -0.803651 | 3.149451e-49 | -8.615850e-47 |
| Msa0123360 | Msa1263750 | 0.829405 | 5.243233e-55 | -8.615850e-47 |
| Msa0123360 | Msa1263790 | 0.832535 | 8.945911e-56 | -8.615850e-47 |
| Msa0123360 | Msa1266990 | 0.832011 | 1.205529e-55 | -8.615850e-47 |
| Msa0123360 | Msa1277660 | 0.814558 | 1.449118e-51 | -8.615850e-47 |
| Msa0123360 | Msa1282580 | -0.814495 | 1.496684e-51 | -8.615850e-47 |
| Msa0123360 | Msa1287460 | 0.826156 | 3.166974e-54 | -8.615850e-47 |
| Msa0123360 | Msa1296760 | 0.813707 | 2.233019e-51 | -8.615850e-47 |
| Msa0123360 | Msa1302640 | 0.824843 | 6.480919e-54 | -8.615850e-47 |
| Msa0123360 | Msa1306840 | 0.805344 | 1.396582e-49 | -8.615850e-47 |
| Msa0123360 | Msa1306920 | 0.844093 | 9.358289e-59 | -8.615850e-47 |
| Msa0123360 | Msa1331000 | 0.810380 | 1.186148e-50 | -8.615850e-47 |
| Msa0123360 | Msa1332590 | 0.803241 | 3.828994e-49 | -8.615850e-47 |
| Msa0123360 | Msa1358250 | 0.895158 | 1.250388e-75 | -8.615850e-47 |
| Msa0123360 | Msa1370070 | -0.812090 | 5.050052e-51 | -8.615850e-47 |
| Msa0123360 | Msa1373030 | 0.802349 | 5.850678e-49 | -8.615850e-47 |
| Msa0123360 | Msa1374470 | 0.824218 | 9.093406e-54 | -8.615850e-47 |
| Msa0123360 | Msa1382560 | 0.822655 | 2.108521e-53 | -8.615850e-47 |
| Msa0123360 | Msa1384190 | 0.807969 | 3.897967e-50 | -8.615850e-47 |
| Msa0123360 | Msa1384880 | 0.831226 | 1.882259e-55 | -8.615850e-47 |
| Msa0123360 | Msa1386780 | 0.862402 | 5.199485e-64 | -8.615850e-47 |
| Msa0123360 | Msa1392780 | 0.894384 | 2.595442e-75 | -8.615850e-47 |
| Msa0123360 | Msa1394290 | 0.818459 | 1.938422e-52 | -8.615850e-47 |
| Msa0123360 | Msa1399550 | 0.825528 | 4.463047e-54 | -8.615850e-47 |
| Msa0123360 | Msa1400220 | 0.834754 | 2.496733e-56 | -8.615850e-47 |
| Msa0123360 | Msa1400580 | 0.878946 | 1.860107e-69 | -8.615850e-47 |
| Msa0123360 | Msa1403340 | 0.832680 | 8.234161e-56 | -8.615850e-47 |
| Msa0123360 | Msa1403420 | 0.823222 | 1.555373e-53 | -8.615850e-47 |
| Msa0123360 | Msa1410100 | 0.813895 | 2.030577e-51 | -8.615850e-47 |
| Msa0123360 | Msa1411750 | 0.856595 | 2.893972e-62 | -8.615850e-47 |
| Msa0123360 | Msa1419870 | 0.871583 | 6.119577e-67 | -8.615850e-47 |
| Msa0123360 | Msa1423350 | 0.800773 | 1.231190e-48 | -8.615850e-47 |
| Msa0123360 | Msa1424750 | 0.808599 | 2.861343e-50 | -8.615850e-47 |
| Msa0123360 | Msa1427230 | 0.801350 | 9.384868e-49 | -8.615850e-47 |
| Msa0123360 | Msa1430680 | 0.802581 | 5.242744e-49 | -8.615850e-47 |
| Msa0123360 | Msa1432420 | 0.864737 | 9.803393e-65 | -8.615850e-47 |
| Msa0123360 | Msa1433390 | 0.861716 | 8.434783e-64 | -8.615850e-47 |
| Msa0123360 | Msa1439550 | 0.847919 | 8.524218e-60 | -8.615850e-47 |
| Msa0123360 | Msa1442210 | 0.805773 | 1.135444e-49 | -8.615850e-47 |
| Msa0123360 | Msa1443850 | 0.805940 | 1.047416e-49 | -8.615850e-47 |
| Msa0123360 | Msa1454480 | 0.836198 | 1.076848e-56 | -8.615850e-47 |
| Msa0123360 | Msa1457920 | 0.868479 | 6.335189e-66 | -8.615850e-47 |
| Msa0123360 | Msa1466540 | 0.807454 | 5.015106e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123360 | MtrunA17_Chr1g0184181 | 96.721 | 610 | 20 | 0 | 1 | 610 | 1 | 610 | 0.0 | 1211 |
| Msa0123360 | MtrunA17_Chr8g0388631 | 28.715 | 498 | 330 | 6 | 91 | 574 | 65 | 551 | 2.47e-49 | 181 |
| Msa0123360 | MtrunA17_Chr8g0346601 | 27.256 | 554 | 359 | 10 | 33 | 575 | 17 | 537 | 3.16e-44 | 166 |
| Msa0123360 | MtrunA17_Chr3g0117701 | 26.326 | 509 | 359 | 6 | 83 | 582 | 245 | 746 | 8.12e-43 | 164 |
| Msa0123360 | MtrunA17_Chr6g0450741 | 28.081 | 495 | 323 | 7 | 98 | 574 | 190 | 669 | 9.06e-42 | 161 |
| Msa0123360 | MtrunA17_Chr4g0059101 | 25.306 | 490 | 354 | 5 | 91 | 573 | 167 | 651 | 7.84e-41 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123360 | AT2G31240.1 | 66.378 | 577 | 182 | 6 | 22 | 590 | 39 | 611 | 0.0 | 782 |
| Msa0123360 | AT3G27960.1 | 29.981 | 527 | 347 | 11 | 91 | 603 | 143 | 661 | 3.75e-52 | 191 |
| Msa0123360 | AT3G27960.3 | 29.981 | 527 | 347 | 11 | 91 | 603 | 143 | 661 | 3.75e-52 | 191 |
| Msa0123360 | AT4G10840.1 | 29.191 | 507 | 324 | 9 | 93 | 575 | 78 | 573 | 2.84e-48 | 179 |
| Msa0123360 | AT3G27960.2 | 29.825 | 456 | 302 | 8 | 91 | 533 | 143 | 593 | 3.43e-47 | 176 |
| Msa0123360 | AT4G10840.2 | 28.879 | 464 | 296 | 8 | 93 | 533 | 78 | 530 | 2.73e-44 | 166 |
| Msa0123360 | AT1G27500.1 | 26.653 | 484 | 322 | 7 | 114 | 579 | 161 | 629 | 3.09e-41 | 159 |
| Msa0123360 | AT1G27500.2 | 26.653 | 484 | 322 | 7 | 114 | 579 | 172 | 640 | 3.65e-41 | 159 |
Find 164 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATATCAGTCATATATTT+TGG | 0.085468 | 1_3:-50393595 | Msa0123360:three_prime_UTR |
| TGCTATGAGTTTGCAGTTAA+TGG | 0.164879 | 1_3:-50396564 | Msa0123360:CDS |
| GAAGCAGGCTATTCCTTATT+TGG | 0.171283 | 1_3:-50395634 | Msa0123360:CDS |
| TGGTTATATCTACAACAATT+TGG | 0.200770 | 1_3:-50395559 | Msa0123360:CDS |
| AGCTTTGGTCCCAAACATTT+TGG | 0.213827 | 1_3:-50395585 | Msa0123360:CDS |
| GGTTTGTTGCGGGTGAAAAT+AGG | 0.214873 | 1_3:+50396893 | None:intergenic |
| TCGGAAGTGTTTGGAGATTA+AGG | 0.223728 | 1_3:-50396348 | Msa0123360:CDS |
| GCTGCATGTGTATTATTATT+AGG | 0.225487 | 1_3:+50393918 | None:intergenic |
| GGTATCTTAATAAGGCTAAT+AGG | 0.226066 | 1_3:-50396499 | Msa0123360:CDS |
| TAATAAGGCTAATAGGGTTT+TGG | 0.236340 | 1_3:-50396492 | Msa0123360:CDS |
| GAGGAAGATAGTGAGGAGTT+AGG | 0.240509 | 1_3:-50396314 | Msa0123360:CDS |
| ATGCTGCAGGTGTACTATTA+TGG | 0.241724 | 1_3:+50393856 | None:intergenic |
| GGCGCTTCCGTATTGTTTAA+AGG | 0.255513 | 1_3:-50396237 | Msa0123360:CDS |
| AATTATATAAGCTAGCTTAT+TGG | 0.260877 | 1_3:+50393711 | None:intergenic |
| GGTTATATCTACAACAATTT+GGG | 0.261299 | 1_3:-50395558 | Msa0123360:CDS |
| GGGTGGTTGTTGTTGCTTAC+AGG | 0.274076 | 1_3:-50395663 | Msa0123360:CDS |
| AGGAGTTAGGGAAAGGGAAT+AGG | 0.275680 | 1_3:-50396301 | Msa0123360:CDS |
| GAGCATTTCTTCCGTTGTTT+TGG | 0.276205 | 1_3:+50396757 | None:intergenic |
| TCAGCAGCACTTTCCAAATA+AGG | 0.279505 | 1_3:+50395621 | None:intergenic |
| AAAAGTTTGCAGACTGTAAA+AGG | 0.282943 | 1_3:-50395890 | Msa0123360:CDS |
| GGTTTAGCTGCATTGAAAAT+TGG | 0.289450 | 1_3:-50396689 | Msa0123360:CDS |
| GTCTTAATTATGGTTTAAAT+AGG | 0.293303 | 1_3:-50396538 | Msa0123360:CDS |
| TGTGTCAGGTTGGGAGTTAC+TGG | 0.296347 | 1_3:+50393833 | None:intergenic |
| GGTGTAGAGGGGTTTGTTGC+GGG | 0.299833 | 1_3:+50396883 | None:intergenic |
| AATAGGTTTAGTGATAGTTT+AGG | 0.302645 | 1_3:-50396521 | Msa0123360:CDS |
| TCAAAGGCTTATGGTGATAT+TGG | 0.309390 | 1_3:-50395411 | Msa0123360:CDS |
| AGGAAGATAGTGAGGAGTTA+GGG | 0.310369 | 1_3:-50396313 | Msa0123360:CDS |
| ATAGGTTTAGTGATAGTTTA+GGG | 0.311847 | 1_3:-50396520 | Msa0123360:CDS |
| ACGAGCGAGGTGAGAGAAAA+AGG | 0.315849 | 1_3:+50396961 | None:intergenic |
| TTAATGGGTAGTCTTAATTA+TGG | 0.322455 | 1_3:-50396548 | Msa0123360:CDS |
| ATAAGCTAGCTTATTGGTAT+TGG | 0.325138 | 1_3:+50393717 | None:intergenic |
| CAGAATCTTTCAAAGGCTTA+TGG | 0.327198 | 1_3:-50395420 | Msa0123360:CDS |
| CCTCCGAGTGCTGCTCTTGT+GGG | 0.336592 | 1_3:+50395706 | None:intergenic |
| TATGTCAGGTTGGGAGTTAT+TGG | 0.341920 | 1_3:+50393893 | None:intergenic |
| AGGTGTTTAGAGATTTCTAT+TGG | 0.345983 | 1_3:-50395870 | Msa0123360:CDS |
| GTATCTTAATAAGGCTAATA+GGG | 0.348444 | 1_3:-50396498 | Msa0123360:CDS |
| GAGATACATACGAAGCGATT+AGG | 0.352147 | 1_3:-50396209 | Msa0123360:CDS |
| TATTTGACTGAATTGGTTGC+TGG | 0.355631 | 1_3:-50393666 | Msa0123360:three_prime_UTR |
| GGCGTTGGAGCAGAATGTTT+TGG | 0.357994 | 1_3:-50396111 | Msa0123360:CDS |
| GTTTGTTGCGGGTGAAAATA+GGG | 0.359213 | 1_3:+50396894 | None:intergenic |
| AGAGAATCTTCGGAAGTGTT+TGG | 0.370920 | 1_3:-50396357 | Msa0123360:CDS |
| GCGAATATGATGATTGCTTT+GGG | 0.375275 | 1_3:-50396026 | Msa0123360:CDS |
| ATAACCAACTCCAAAATGTT+TGG | 0.376664 | 1_3:+50395575 | None:intergenic |
| AGGGTTGACATGGTTTGAAA+TGG | 0.377879 | 1_3:+50396860 | None:intergenic |
| CTTCTTGGGATTGTTTATAG+TGG | 0.378113 | 1_3:-50396152 | Msa0123360:CDS |
| GTGTTTGTGTTGATGATGTT+AGG | 0.380305 | 1_3:-50396451 | Msa0123360:CDS |
| GCGCATGATAGGAAGCTTCT+TGG | 0.385283 | 1_3:-50396167 | Msa0123360:CDS |
| TAGTTTAGGGTATCTTAATA+AGG | 0.387240 | 1_3:-50396507 | Msa0123360:CDS |
| GGAAATTTCATTCAATGAAA+AGG | 0.398867 | 1_3:-50396717 | Msa0123360:CDS |
| CTTCTTCTGCACTTGCTCCA+TGG | 0.399591 | 1_3:+50394033 | None:intergenic |
| AGATACATACGAAGCGATTA+GGG | 0.403607 | 1_3:-50396208 | Msa0123360:CDS |
| CCCTCCGAGTGCTGCTCTTG+TGG | 0.404697 | 1_3:+50395705 | None:intergenic |
| GCTATGAGTTTGCAGTTAAT+GGG | 0.407040 | 1_3:-50396563 | Msa0123360:CDS |
| CTGTTGAGGTTGCGCATGAT+AGG | 0.407770 | 1_3:-50396178 | Msa0123360:CDS |
| GGATGTCTGCTAAACTGTTC+GGG | 0.410647 | 1_3:+50393797 | None:intergenic |
| TGCGAATATGATGATTGCTT+TGG | 0.410869 | 1_3:-50396027 | Msa0123360:CDS |
| AGCAGCAAGTTATAGATGCT+TGG | 0.412778 | 1_3:-50394061 | Msa0123360:CDS |
| AGCTCTTGTGCTTGTATCAA+TGG | 0.413035 | 1_3:-50395934 | Msa0123360:CDS |
| GGAGTTAGGGAAAGGGAATA+GGG | 0.418677 | 1_3:-50396300 | Msa0123360:CDS |
| TAACCAACTCCAAAATGTTT+GGG | 0.419203 | 1_3:+50395576 | None:intergenic |
| GGGGAAAGCGTTGTGTAATC+AGG | 0.419585 | 1_3:-50395913 | Msa0123360:CDS |
| GGGTTGACATGGTTTGAAAT+GGG | 0.422427 | 1_3:+50396861 | None:intergenic |
| TGGGATTGTTTATAGTGGGA+TGG | 0.423640 | 1_3:-50396147 | Msa0123360:CDS |
| GGAAGTGTATCTGCAAGAAT+AGG | 0.426493 | 1_3:-50395684 | Msa0123360:CDS |
| CGCATGATAGGAAGCTTCTT+GGG | 0.430357 | 1_3:-50396166 | Msa0123360:CDS |
| GGTTTGAAATGGGGTGTAGA+GGG | 0.432347 | 1_3:+50396871 | None:intergenic |
| AGGATGTCTGCTAAACTGTT+CGG | 0.436022 | 1_3:+50393796 | None:intergenic |
| GGGTGTAGAGGGGTTTGTTG+CGG | 0.438716 | 1_3:+50396882 | None:intergenic |
| GCTCTTGTGCTTGTATCAAT+GGG | 0.440321 | 1_3:-50395933 | Msa0123360:CDS |
| AAGAGGCGCTAGAGAATCTT+CGG | 0.442376 | 1_3:-50396367 | Msa0123360:CDS |
| GGTGTTTAGAGATTTCTATT+GGG | 0.444294 | 1_3:-50395869 | Msa0123360:CDS |
| GATTGACGTGGCGGTGTGTC+AGG | 0.451015 | 1_3:+50393819 | None:intergenic |
| GCAGCAAGTTATAGATGCTT+GGG | 0.454415 | 1_3:-50394060 | Msa0123360:CDS |
| TCATGCTGTGCAATTTGAGT+TGG | 0.455338 | 1_3:-50396420 | Msa0123360:CDS |
| TGCTGCAGGTGTACTATTAT+GGG | 0.459170 | 1_3:+50393857 | None:intergenic |
| GAAGTGTATCTGCAAGAATA+GGG | 0.459783 | 1_3:-50395683 | Msa0123360:CDS |
| ATAGTGAGGAGTTAGGGAAA+GGG | 0.461155 | 1_3:-50396307 | Msa0123360:CDS |
| GGAAAGGGAAGAGCCTTCAT+AGG | 0.464833 | 1_3:+50393939 | None:intergenic |
| AACTGCAAACTCATAGCATA+AGG | 0.469559 | 1_3:+50396569 | None:intergenic |
| GCGGGTGAAAATAGGGTTGA+TGG | 0.478725 | 1_3:+50396901 | None:intergenic |
| TGTGTATTATTATTAGGAAA+GGG | 0.478913 | 1_3:+50393924 | None:intergenic |
| GTCAGCAGCGCAGATGTTTG+CGG | 0.481206 | 1_3:-50395505 | Msa0123360:CDS |
| TTCTTGGGATTGTTTATAGT+GGG | 0.486322 | 1_3:-50396151 | Msa0123360:CDS |
| AGAAACCTCCATGATATCCT+TGG | 0.489502 | 1_3:+50395479 | None:intergenic |
| TCATTCAATGAAAAGGAGCT+TGG | 0.491295 | 1_3:-50396710 | Msa0123360:CDS |
| GCTAATGTTAAGACGGCGAT+GGG | 0.491334 | 1_3:-50396398 | Msa0123360:CDS |
| TTTGGGTAGGTTAGAGAATG+AGG | 0.492492 | 1_3:-50396474 | Msa0123360:CDS |
| GAACGGTTGAAAGAGAGCTT+TGG | 0.492632 | 1_3:-50395600 | Msa0123360:CDS |
| GTTGTTGTTGCTTACAGGTA+AGG | 0.496912 | 1_3:-50395658 | Msa0123360:CDS |
| TGCAAATGAGGTTCCTATGA+AGG | 0.499756 | 1_3:-50393952 | Msa0123360:CDS |
| GAAGAATTGGAATCTCAGTT+CGG | 0.503248 | 1_3:-50396075 | Msa0123360:CDS |
| GATGTAACGGTATGTCAGGT+TGG | 0.504036 | 1_3:+50393883 | None:intergenic |
| AAAATATGCTGTTGTGAAAG+AGG | 0.504715 | 1_3:+50393776 | None:intergenic |
| TTGATGAATGCCTATGGTAC+TGG | 0.507101 | 1_3:-50393755 | Msa0123360:three_prime_UTR |
| GATAGTGAGGAGTTAGGGAA+AGG | 0.510103 | 1_3:-50396308 | Msa0123360:CDS |
| TGGTTTGAAATGGGGTGTAG+AGG | 0.511003 | 1_3:+50396870 | None:intergenic |
| CTGCGATTTCGTTGCTGAAG+AGG | 0.511189 | 1_3:-50395752 | Msa0123360:CDS |
| ATGTAACGGTATGTCAGGTT+GGG | 0.511251 | 1_3:+50393884 | None:intergenic |
| TTGGGTAGGTTAGAGAATGA+GGG | 0.511672 | 1_3:-50396473 | Msa0123360:CDS |
| ACGTGGCGGTGTGTCAGGTT+GGG | 0.514066 | 1_3:+50393824 | None:intergenic |
| GATATCATGGAGGTTTCTCT+TGG | 0.517703 | 1_3:-50395474 | Msa0123360:CDS |
| GTTCATAGTTTCATATAGCA+TGG | 0.522310 | 1_3:+50395785 | None:intergenic |
| GATTGTTTATAGTGGGATGG+AGG | 0.522341 | 1_3:-50396144 | Msa0123360:CDS |
| GTTTGAAATGGGGTGTAGAG+GGG | 0.522438 | 1_3:+50396872 | None:intergenic |
| GACGTGGCGGTGTGTCAGGT+TGG | 0.523342 | 1_3:+50393823 | None:intergenic |
| GCTCAAAGCATTCAGTGAGA+TGG | 0.525816 | 1_3:-50396738 | Msa0123360:CDS |
| TGCGATTTCGTTGCTGAAGA+GGG | 0.530007 | 1_3:-50395751 | Msa0123360:CDS |
| TGCGGTAGCCAAGGATATCA+TGG | 0.531067 | 1_3:-50395487 | Msa0123360:CDS |
| CCGCGGTGTCTCTGCAAATG+AGG | 0.535152 | 1_3:-50393964 | Msa0123360:CDS |
| TGTCTAGGAGAGATTTGAGT+GGG | 0.536028 | 1_3:+50396827 | None:intergenic |
| GAAAGGGAATAGGGATTTAG+CGG | 0.537665 | 1_3:-50396291 | Msa0123360:CDS |
| GCTTACAGGTAAGGTGAAGC+AGG | 0.537806 | 1_3:-50395649 | Msa0123360:CDS |
| GGAAGTTTCTGAGGCATACT+CGG | 0.541766 | 1_3:-50395814 | Msa0123360:CDS |
| AAACTTTATACCAGTACCAT+AGG | 0.543632 | 1_3:+50393745 | None:intergenic |
| CTATTATGGGATTGATGTAA+CGG | 0.547602 | 1_3:+50393870 | None:intergenic |
| GAAACTCAATTGCAAGGGAA+TGG | 0.548823 | 1_3:+50394084 | None:intergenic |
| ATGTGTATTATTATTAGGAA+AGG | 0.552489 | 1_3:+50393923 | None:intergenic |
| CCACAAGAGCAGCACTCGGA+GGG | 0.552886 | 1_3:-50395705 | Msa0123360:CDS |
| GGAGGATCATGAGAAGGCGT+TGG | 0.552931 | 1_3:-50396126 | Msa0123360:CDS |
| GGTTGACATGGTTTGAAATG+GGG | 0.565019 | 1_3:+50396862 | None:intergenic |
| TGAGTTGGCTAATGTTAAGA+CGG | 0.567694 | 1_3:-50396405 | Msa0123360:CDS |
| GATTGATGTAACGGTATGTC+AGG | 0.570067 | 1_3:+50393879 | None:intergenic |
| GGCGATGGGGAGGAGAGAAG+AGG | 0.570707 | 1_3:-50396384 | Msa0123360:CDS |
| TCTAACGCCTTTAAACAATA+CGG | 0.571467 | 1_3:+50396230 | None:intergenic |
| AGCATGTCAGAATCTTTCAA+AGG | 0.573306 | 1_3:-50395427 | Msa0123360:CDS |
| GGCTAATGTTAAGACGGCGA+TGG | 0.573411 | 1_3:-50396399 | Msa0123360:CDS |
| GGGAGATACGATGAAGCTGT+TGG | 0.573991 | 1_3:-50396005 | Msa0123360:CDS |
| GCTGCTGAAACTCAATTGCA+AGG | 0.574173 | 1_3:+50394078 | None:intergenic |
| AATTGCACAGCATGAAGCAC+AGG | 0.576090 | 1_3:+50396428 | None:intergenic |
| GTTATATCTACAACAATTTG+GGG | 0.576788 | 1_3:-50395557 | Msa0123360:CDS |
| AGGCTTATGGTGATATTGGA+AGG | 0.580409 | 1_3:-50395407 | Msa0123360:intron |
| CTGCTGAAACTCAATTGCAA+GGG | 0.582844 | 1_3:+50394079 | None:intergenic |
| ATTAGGGATGAATTCTGTTG+AGG | 0.587352 | 1_3:-50396192 | Msa0123360:CDS |
| CTCATTTGCAGAGACACCGC+GGG | 0.591950 | 1_3:+50393965 | None:intergenic |
| TACACCGGTGGAAGTTTCTG+AGG | 0.595722 | 1_3:-50395823 | Msa0123360:CDS |
| ATGTTAAGACGGCGATGGGG+AGG | 0.595931 | 1_3:-50396394 | Msa0123360:CDS |
| GCAGATGTTTGCGGTAGCCA+AGG | 0.596662 | 1_3:-50395496 | Msa0123360:CDS |
| TGGGAGTTACTGGATGCTGC+AGG | 0.602801 | 1_3:+50393843 | None:intergenic |
| AACATCTGCGCTGCTGACTG+AGG | 0.607323 | 1_3:+50395510 | None:intergenic |
| GCTCCCACAAGAGCAGCACT+CGG | 0.608859 | 1_3:-50395709 | Msa0123360:CDS |
| ATAGATGCTTGGGAAAGCCA+TGG | 0.619820 | 1_3:-50394050 | Msa0123360:CDS |
| ATTTGGAAAGTGCTGCTGAA+CGG | 0.624374 | 1_3:-50395617 | Msa0123360:CDS |
| AAGATGAAGCTCGACGAGCG+AGG | 0.629333 | 1_3:+50396948 | None:intergenic |
| TAAACTGTTCGGGATTGACG+TGG | 0.629660 | 1_3:+50393807 | None:intergenic |
| TGGGATGGAGGATCATGAGA+AGG | 0.633696 | 1_3:-50396132 | Msa0123360:CDS |
| GAAGCTTGATCGTGAAGGTG+AGG | 0.637522 | 1_3:-50396663 | Msa0123360:CDS |
| TTTAGCGGAAGCTTATGTTG+CGG | 0.637589 | 1_3:-50396276 | Msa0123360:CDS |
| CCCACAAGAGCAGCACTCGG+AGG | 0.640444 | 1_3:-50395706 | Msa0123360:CDS |
| AAGAGAACAGATTACACCGG+TGG | 0.642489 | 1_3:-50395835 | Msa0123360:CDS |
| CGAATATGATGATTGCTTTG+GGG | 0.644617 | 1_3:-50396025 | Msa0123360:CDS |
| TCAATTGTATCTGCATGATG+TGG | 0.648031 | 1_3:+50395450 | None:intergenic |
| ACTGTTCGGGATTGACGTGG+CGG | 0.661175 | 1_3:+50393810 | None:intergenic |
| TTGTCTAGGAGAGATTTGAG+TGG | 0.661188 | 1_3:+50396826 | None:intergenic |
| TTGATGGATGCATCGCGGAG+AGG | 0.665367 | 1_3:+50396917 | None:intergenic |
| TATGCCTCAGAAACTTCCAC+CGG | 0.674657 | 1_3:+50395819 | None:intergenic |
| GTGTATCTGCAAGAATAGGG+TGG | 0.702061 | 1_3:-50395680 | Msa0123360:CDS |
| CCTCATTTGCAGAGACACCG+CGG | 0.706770 | 1_3:+50393964 | None:intergenic |
| CTCTTGTGCTTGTATCAATG+GGG | 0.708946 | 1_3:-50395932 | Msa0123360:CDS |
| TAAAAGAGAACAGATTACAC+CGG | 0.715171 | 1_3:-50395838 | Msa0123360:CDS |
| TTATATCTACAACAATTTGG+GGG | 0.722117 | 1_3:-50395556 | Msa0123360:CDS |
| CTAATGTTAAGACGGCGATG+GGG | 0.738436 | 1_3:-50396397 | Msa0123360:CDS |
| TAGGGTTGATGGATGCATCG+CGG | 0.740256 | 1_3:+50396912 | None:intergenic |
| GGTAGCCAAGGATATCATGG+AGG | 0.746203 | 1_3:-50395484 | Msa0123360:CDS |
| GGTCTGAAGCTTGATCGTGA+AGG | 0.746730 | 1_3:-50396668 | Msa0123360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTATTTCATTATTTAGAT+CGG | - | chr1_3:50396114-50396133 | Msa0123360:CDS | 15.0% |
| !! | CTTGAATTACAAAAATATTT+AGG | - | chr1_3:50396240-50396259 | Msa0123360:CDS | 15.0% |
| !! | TTACAAAAATATTTAGGAAT+CGG | - | chr1_3:50396246-50396265 | Msa0123360:CDS | 15.0% |
| !! | GTCTTAATTATGGTTTAAAT+AGG | - | chr1_3:50394043-50394062 | Msa0123360:CDS | 20.0% |
| !!! | CAGTTTAAACATTTAACTTT+TGG | - | chr1_3:50395294-50395313 | Msa0123360:intron | 20.0% |
| !!! | AACAATTATTTTGAGACTTA+AGG | - | chr1_3:50395354-50395373 | Msa0123360:intron | 20.0% |
| !!! | ATAAAACTTAGTTTGATAGA+TGG | + | chr1_3:50395813-50395832 | None:intergenic | 20.0% |
| !! | AATTCAAGTACATACTATAT+AGG | + | chr1_3:50396228-50396247 | None:intergenic | 20.0% |
| !!! | TTCATGTTTTCCTAAAATAT+TGG | - | chr1_3:50396466-50396485 | Msa0123360:CDS | 20.0% |
| !! | TGTGTATTATTATTAGGAAA+GGG | + | chr1_3:50396660-50396679 | None:intergenic | 20.0% |
| !! | ATGTGTATTATTATTAGGAA+AGG | + | chr1_3:50396661-50396680 | None:intergenic | 20.0% |
| !!! | AATTATATAAGCTAGCTTAT+TGG | + | chr1_3:50396873-50396892 | None:intergenic | 20.0% |
| !!! | TTAGTTTTATTTGACTGAAT+TGG | - | chr1_3:50396908-50396927 | Msa0123360:CDS | 20.0% |
| ! | GGAAATTTCATTCAATGAAA+AGG | - | chr1_3:50393864-50393883 | Msa0123360:CDS | 25.0% |
| !! | TTAATGGGTAGTCTTAATTA+TGG | - | chr1_3:50394033-50394052 | Msa0123360:CDS | 25.0% |
| ! | AATAGGTTTAGTGATAGTTT+AGG | - | chr1_3:50394060-50394079 | Msa0123360:CDS | 25.0% |
| ! | ATAGGTTTAGTGATAGTTTA+GGG | - | chr1_3:50394061-50394080 | Msa0123360:CDS | 25.0% |
| !! | TAGTTTAGGGTATCTTAATA+AGG | - | chr1_3:50394074-50394093 | Msa0123360:CDS | 25.0% |
| ! | GTATCTTAATAAGGCTAATA+GGG | - | chr1_3:50394083-50394102 | Msa0123360:CDS | 25.0% |
| ! | TGGTTATATCTACAACAATT+TGG | - | chr1_3:50395022-50395041 | Msa0123360:intron | 25.0% |
| ! | GGTTATATCTACAACAATTT+GGG | - | chr1_3:50395023-50395042 | Msa0123360:intron | 25.0% |
| ! | GTTATATCTACAACAATTTG+GGG | - | chr1_3:50395024-50395043 | Msa0123360:intron | 25.0% |
| ! | TTATATCTACAACAATTTGG+GGG | - | chr1_3:50395025-50395044 | Msa0123360:intron | 25.0% |
| !!! | ATTATTTTGAGACTTAAGGA+TGG | - | chr1_3:50395358-50395377 | Msa0123360:intron | 25.0% |
| ! | CTGCTTTCAAAAGAAAAATT+AGG | - | chr1_3:50395480-50395499 | Msa0123360:CDS | 25.0% |
| ! | TTTCATATAAGTAGCTATGT+TGG | - | chr1_3:50395599-50395618 | Msa0123360:CDS | 25.0% |
| ! | TTGGAGAACTTATTGAAATA+AGG | - | chr1_3:50395618-50395637 | Msa0123360:CDS | 25.0% |
| !!! | ATCAATGTTTTGCTTGTTTT+TGG | - | chr1_3:50396079-50396098 | Msa0123360:CDS | 25.0% |
| ! | AAAAATATTTAGGAATCGGA+AGG | - | chr1_3:50396250-50396269 | Msa0123360:CDS | 25.0% |
| !! | AACTGTATATGTTTTTCCAA+CGG | - | chr1_3:50396438-50396457 | Msa0123360:CDS | 25.0% |
| GGTATCTTAATAAGGCTAAT+AGG | - | chr1_3:50394082-50394101 | Msa0123360:CDS | 30.0% | |
| ! | TAATAAGGCTAATAGGGTTT+TGG | - | chr1_3:50394089-50394108 | Msa0123360:intron | 30.0% |
| ! | AATAAGGCTAATAGGGTTTT+GGG | - | chr1_3:50394090-50394109 | Msa0123360:intron | 30.0% |
| ! | GATTAAGGAAATGACTTTTG+AGG | - | chr1_3:50394248-50394267 | Msa0123360:intron | 30.0% |
| !!! | TGTTGCGGTTTTGAATTTTA+AGG | - | chr1_3:50394320-50394339 | Msa0123360:intron | 30.0% |
| TCTAACGCCTTTAAACAATA+CGG | + | chr1_3:50394354-50394373 | None:intergenic | 30.0% | |
| TTCTTGGGATTGTTTATAGT+GGG | - | chr1_3:50394430-50394449 | Msa0123360:intron | 30.0% | |
| AAAAGTTTGCAGACTGTAAA+AGG | - | chr1_3:50394691-50394710 | Msa0123360:intron | 30.0% | |
| AGGTGTTTAGAGATTTCTAT+TGG | - | chr1_3:50394711-50394730 | Msa0123360:intron | 30.0% | |
| GGTGTTTAGAGATTTCTATT+GGG | - | chr1_3:50394712-50394731 | Msa0123360:intron | 30.0% | |
| TAAAAGAGAACAGATTACAC+CGG | - | chr1_3:50394743-50394762 | Msa0123360:intron | 30.0% | |
| GTTCATAGTTTCATATAGCA+TGG | + | chr1_3:50394799-50394818 | None:intergenic | 30.0% | |
| TAACCAACTCCAAAATGTTT+GGG | + | chr1_3:50395008-50395027 | None:intergenic | 30.0% | |
| ATAACCAACTCCAAAATGTT+TGG | + | chr1_3:50395009-50395028 | None:intergenic | 30.0% | |
| AACCAAGAGAAACAATATCA+GGG | + | chr1_3:50395230-50395249 | None:intergenic | 30.0% | |
| AAACCAAGAGAAACAATATC+AGG | + | chr1_3:50395231-50395250 | None:intergenic | 30.0% | |
| !! | TTGTTGATTCTGCAAACAAT+TGG | - | chr1_3:50395249-50395268 | Msa0123360:intron | 30.0% |
| !! | ATTCTGCAAACAATTGGTTT+TGG | - | chr1_3:50395255-50395274 | Msa0123360:intron | 30.0% |
| !!! | TTCTGCAAACAATTGGTTTT+GGG | - | chr1_3:50395256-50395275 | Msa0123360:intron | 30.0% |
| TCTCAAAATAATTGTTCCAC+TGG | + | chr1_3:50395350-50395369 | None:intergenic | 30.0% | |
| AAGAAAAATTAGGCTGTGTT+TGG | - | chr1_3:50395490-50395509 | Msa0123360:CDS | 30.0% | |
| TTATGAGCATAGCATGAATA+AGG | + | chr1_3:50395751-50395770 | None:intergenic | 30.0% | |
| ATCTTGAGTACAAAGAGTTA+TGG | - | chr1_3:50396003-50396022 | Msa0123360:CDS | 30.0% | |
| AGCACATTATCCAAAAACAA+GGG | + | chr1_3:50396378-50396397 | None:intergenic | 30.0% | |
| AAGCACATTATCCAAAAACA+AGG | + | chr1_3:50396379-50396398 | None:intergenic | 30.0% | |
| ! | GAAAACATGAATTTTTCCGT+TGG | + | chr1_3:50396457-50396476 | None:intergenic | 30.0% |
| GCTGCATGTGTATTATTATT+AGG | + | chr1_3:50396666-50396685 | None:intergenic | 30.0% | |
| CTATTATGGGATTGATGTAA+CGG | + | chr1_3:50396714-50396733 | None:intergenic | 30.0% | |
| AAAATATGCTGTTGTGAAAG+AGG | + | chr1_3:50396808-50396827 | None:intergenic | 30.0% | |
| !!! | CATATTTTGATGAATGCCTA+TGG | - | chr1_3:50396820-50396839 | Msa0123360:CDS | 30.0% |
| AAACTTTATACCAGTACCAT+AGG | + | chr1_3:50396839-50396858 | None:intergenic | 30.0% | |
| ! | ATAAGCTAGCTTATTGGTAT+TGG | + | chr1_3:50396867-50396886 | None:intergenic | 30.0% |
| ! | CAGATTTTACAGATTTGTGT+AGG | - | chr1_3:50396942-50396961 | Msa0123360:CDS | 30.0% |
| TCATTCAATGAAAAGGAGCT+TGG | - | chr1_3:50393871-50393890 | Msa0123360:CDS | 35.0% | |
| GGTTTAGCTGCATTGAAAAT+TGG | - | chr1_3:50393892-50393911 | Msa0123360:CDS | 35.0% | |
| !! | GCAAATTCAAGAGCTTTTTC+AGG | + | chr1_3:50393946-50393965 | None:intergenic | 35.0% |
| AACTGCAAACTCATAGCATA+AGG | + | chr1_3:50394015-50394034 | None:intergenic | 35.0% | |
| TGCTATGAGTTTGCAGTTAA+TGG | - | chr1_3:50394017-50394036 | Msa0123360:CDS | 35.0% | |
| GCTATGAGTTTGCAGTTAAT+GGG | - | chr1_3:50394018-50394037 | Msa0123360:CDS | 35.0% | |
| !! | GTGTTTGTGTTGATGATGTT+AGG | - | chr1_3:50394130-50394149 | Msa0123360:intron | 35.0% |
| ! | TGAGTTGGCTAATGTTAAGA+CGG | - | chr1_3:50394176-50394195 | Msa0123360:intron | 35.0% |
| !!! | TGCGGTTTTGAATTTTAAGG+AGG | - | chr1_3:50394323-50394342 | Msa0123360:intron | 35.0% |
| AGATACATACGAAGCGATTA+GGG | - | chr1_3:50394373-50394392 | Msa0123360:intron | 35.0% | |
| ATTAGGGATGAATTCTGTTG+AGG | - | chr1_3:50394389-50394408 | Msa0123360:intron | 35.0% | |
| CTTCTTGGGATTGTTTATAG+TGG | - | chr1_3:50394429-50394448 | Msa0123360:intron | 35.0% | |
| !! | CGCAGAAGATTTTGAAGAAT+TGG | - | chr1_3:50394493-50394512 | Msa0123360:intron | 35.0% |
| GAAGAATTGGAATCTCAGTT+CGG | - | chr1_3:50394506-50394525 | Msa0123360:intron | 35.0% | |
| TGCGAATATGATGATTGCTT+TGG | - | chr1_3:50394554-50394573 | Msa0123360:intron | 35.0% | |
| GCGAATATGATGATTGCTTT+GGG | - | chr1_3:50394555-50394574 | Msa0123360:intron | 35.0% | |
| CGAATATGATGATTGCTTTG+GGG | - | chr1_3:50394556-50394575 | Msa0123360:intron | 35.0% | |
| GAAGTGTATCTGCAAGAATA+GGG | - | chr1_3:50394898-50394917 | Msa0123360:intron | 35.0% | |
| TCAATTGTATCTGCATGATG+TGG | + | chr1_3:50395134-50395153 | None:intergenic | 35.0% | |
| AGCATGTCAGAATCTTTCAA+AGG | - | chr1_3:50395154-50395173 | Msa0123360:intron | 35.0% | |
| CAGAATCTTTCAAAGGCTTA+TGG | - | chr1_3:50395161-50395180 | Msa0123360:intron | 35.0% | |
| TCAAAGGCTTATGGTGATAT+TGG | - | chr1_3:50395170-50395189 | Msa0123360:intron | 35.0% | |
| TATGGTGATATTGGAAGGTA+TGG | - | chr1_3:50395179-50395198 | Msa0123360:intron | 35.0% | |
| ! | TTCCCTGATATTGTTTCTCT+TGG | - | chr1_3:50395225-50395244 | Msa0123360:intron | 35.0% |
| TGGACATATACCTAATAGTG+TGG | - | chr1_3:50395314-50395333 | Msa0123360:intron | 35.0% | |
| GGACATATACCTAATAGTGT+GGG | - | chr1_3:50395315-50395334 | Msa0123360:intron | 35.0% | |
| AATCTGAATCCCACACTATT+AGG | + | chr1_3:50395327-50395346 | None:intergenic | 35.0% | |
| TCTGACATAAAATAGAGTGC+AGG | - | chr1_3:50395412-50395431 | Msa0123360:CDS | 35.0% | |
| CTGACATAAAATAGAGTGCA+GGG | - | chr1_3:50395413-50395432 | Msa0123360:CDS | 35.0% | |
| TAAGAACTAGCAACAGTGTT+TGG | + | chr1_3:50395689-50395708 | None:intergenic | 35.0% | |
| ! | TGTTTGGAATGGCTTATTTG+AGG | + | chr1_3:50395725-50395744 | None:intergenic | 35.0% |
| TCAAATAAGCCATTCCAAAC+AGG | - | chr1_3:50395724-50395743 | Msa0123360:CDS | 35.0% | |
| AGGTAGACATGGAAACTAAA+AGG | + | chr1_3:50395775-50395794 | None:intergenic | 35.0% | |
| AACTATATGAGAGGTAGACA+TGG | + | chr1_3:50395786-50395805 | None:intergenic | 35.0% | |
| GATGGAAAGAACTATATGAG+AGG | + | chr1_3:50395795-50395814 | None:intergenic | 35.0% | |
| GCAATTCCATGTGCAATTAT+GGG | + | chr1_3:50396035-50396054 | None:intergenic | 35.0% | |
| AGCAATTCCATGTGCAATTA+TGG | + | chr1_3:50396036-50396055 | None:intergenic | 35.0% | |
| ATATGCAATTGAGCTCGAAA+TGG | + | chr1_3:50396141-50396160 | None:intergenic | 35.0% | |
| ! | CGGAAGGTATAATTTAGACT+TGG | - | chr1_3:50396266-50396285 | Msa0123360:CDS | 35.0% |
| ! | AATTTAGACTTGGTTGTTCC+CGG | - | chr1_3:50396276-50396295 | Msa0123360:CDS | 35.0% |
| !!! | TTGTTTCTGTCCCTTGTTTT+TGG | - | chr1_3:50396365-50396384 | Msa0123360:CDS | 35.0% |
| ! | GGCTGCAATTCCAATATTTT+AGG | + | chr1_3:50396479-50396498 | None:intergenic | 35.0% |
| CAATTAAAGAAAAAAGCCCG+CGG | - | chr1_3:50396600-50396619 | Msa0123360:CDS | 35.0% | |
| TATTTGACTGAATTGGTTGC+TGG | - | chr1_3:50396915-50396934 | Msa0123360:CDS | 35.0% | |
| ! | GTTTGTTGCGGGTGAAAATA+GGG | + | chr1_3:50393690-50393709 | None:intergenic | 40.0% |
| ! | GGTTGACATGGTTTGAAATG+GGG | + | chr1_3:50393722-50393741 | None:intergenic | 40.0% |
| ! | GGGTTGACATGGTTTGAAAT+GGG | + | chr1_3:50393723-50393742 | None:intergenic | 40.0% |
| AGGGTTGACATGGTTTGAAA+TGG | + | chr1_3:50393724-50393743 | None:intergenic | 40.0% | |
| ! | TTTTTGGATGAGGGTTGACA+TGG | + | chr1_3:50393734-50393753 | None:intergenic | 40.0% |
| !! | TTGAGTGGGTTTTTGGATGA+GGG | + | chr1_3:50393743-50393762 | None:intergenic | 40.0% |
| !! | TTTGAGTGGGTTTTTGGATG+AGG | + | chr1_3:50393744-50393763 | None:intergenic | 40.0% |
| !! | GAGAGATTTGAGTGGGTTTT+TGG | + | chr1_3:50393750-50393769 | None:intergenic | 40.0% |
| TGTCTAGGAGAGATTTGAGT+GGG | + | chr1_3:50393757-50393776 | None:intergenic | 40.0% | |
| TTGTCTAGGAGAGATTTGAG+TGG | + | chr1_3:50393758-50393777 | None:intergenic | 40.0% | |
| ! | TCGATGATTTTGCGTTGTCT+AGG | + | chr1_3:50393772-50393791 | None:intergenic | 40.0% |
| !! | TTTTGAGTCCGCCAAAACAA+CGG | - | chr1_3:50393813-50393832 | Msa0123360:CDS | 40.0% |
| !!! | CATTTCTTCCGTTGTTTTGG+CGG | + | chr1_3:50393824-50393843 | None:intergenic | 40.0% |
| ! | GAGCATTTCTTCCGTTGTTT+TGG | + | chr1_3:50393827-50393846 | None:intergenic | 40.0% |
| TTTGGGTAGGTTAGAGAATG+AGG | - | chr1_3:50394107-50394126 | Msa0123360:intron | 40.0% | |
| TTGGGTAGGTTAGAGAATGA+GGG | - | chr1_3:50394108-50394127 | Msa0123360:intron | 40.0% | |
| TCATGCTGTGCAATTTGAGT+TGG | - | chr1_3:50394161-50394180 | Msa0123360:intron | 40.0% | |
| !! | AGAGAATCTTCGGAAGTGTT+TGG | - | chr1_3:50394224-50394243 | Msa0123360:intron | 40.0% |
| !! | TCGGAAGTGTTTGGAGATTA+AGG | - | chr1_3:50394233-50394252 | Msa0123360:intron | 40.0% |
| !! | GACTTTTGAGGAAGATAGTG+AGG | - | chr1_3:50394260-50394279 | Msa0123360:intron | 40.0% |
| AGGAAGATAGTGAGGAGTTA+GGG | - | chr1_3:50394268-50394287 | Msa0123360:intron | 40.0% | |
| ATAGTGAGGAGTTAGGGAAA+GGG | - | chr1_3:50394274-50394293 | Msa0123360:intron | 40.0% | |
| GAAAGGGAATAGGGATTTAG+CGG | - | chr1_3:50394290-50394309 | Msa0123360:intron | 40.0% | |
| TTTAGCGGAAGCTTATGTTG+CGG | - | chr1_3:50394305-50394324 | Msa0123360:intron | 40.0% | |
| GAGATACATACGAAGCGATT+AGG | - | chr1_3:50394372-50394391 | Msa0123360:intron | 40.0% | |
| ! | TGGGATTGTTTATAGTGGGA+TGG | - | chr1_3:50394434-50394453 | Msa0123360:intron | 40.0% |
| ! | GATTGTTTATAGTGGGATGG+AGG | - | chr1_3:50394437-50394456 | Msa0123360:intron | 40.0% |
| AGCTCTTGTGCTTGTATCAA+TGG | - | chr1_3:50394647-50394666 | Msa0123360:intron | 40.0% | |
| GCTCTTGTGCTTGTATCAAT+GGG | - | chr1_3:50394648-50394667 | Msa0123360:intron | 40.0% | |
| CTCTTGTGCTTGTATCAATG+GGG | - | chr1_3:50394649-50394668 | Msa0123360:intron | 40.0% | |
| ! | GGAAGTGTATCTGCAAGAAT+AGG | - | chr1_3:50394897-50394916 | Msa0123360:intron | 40.0% |
| ! | GTTGTTGTTGCTTACAGGTA+AGG | - | chr1_3:50394923-50394942 | Msa0123360:intron | 40.0% |
| GAAGCAGGCTATTCCTTATT+TGG | - | chr1_3:50394947-50394966 | Msa0123360:intron | 40.0% | |
| TCAGCAGCACTTTCCAAATA+AGG | + | chr1_3:50394963-50394982 | None:intergenic | 40.0% | |
| !! | ATTTGGAAAGTGCTGCTGAA+CGG | - | chr1_3:50394964-50394983 | Msa0123360:intron | 40.0% |
| !! | AGCTTTGGTCCCAAACATTT+TGG | - | chr1_3:50394996-50395015 | Msa0123360:intron | 40.0% |
| AGAAACCTCCATGATATCCT+TGG | + | chr1_3:50395105-50395124 | None:intergenic | 40.0% | |
| GATATCATGGAGGTTTCTCT+TGG | - | chr1_3:50395107-50395126 | Msa0123360:intron | 40.0% | |
| AGGCTTATGGTGATATTGGA+AGG | - | chr1_3:50395174-50395193 | Msa0123360:intron | 40.0% | |
| GAATAAGGACCTGTTTGGAA+TGG | + | chr1_3:50395736-50395755 | None:intergenic | 40.0% | |
| AGCATGAATAAGGACCTGTT+TGG | + | chr1_3:50395741-50395760 | None:intergenic | 40.0% | |
| GAGCACAGAAGAGAATATAG+TGG | + | chr1_3:50395865-50395884 | None:intergenic | 40.0% | |
| ! | TCACCAAGAGAGTTCTGATT+TGG | - | chr1_3:50395883-50395902 | Msa0123360:CDS | 40.0% |
| ACACCAAATCAGAACTCTCT+TGG | + | chr1_3:50395889-50395908 | None:intergenic | 40.0% | |
| TCAACGTAACATACTGTGAG+TGG | - | chr1_3:50396331-50396350 | Msa0123360:CDS | 40.0% | |
| GAAACTCAATTGCAAGGGAA+TGG | + | chr1_3:50396500-50396519 | None:intergenic | 40.0% | |
| CTGCTGAAACTCAATTGCAA+GGG | + | chr1_3:50396505-50396524 | None:intergenic | 40.0% | |
| AGCAGCAAGTTATAGATGCT+TGG | - | chr1_3:50396520-50396539 | Msa0123360:CDS | 40.0% | |
| GCAGCAAGTTATAGATGCTT+GGG | - | chr1_3:50396521-50396540 | Msa0123360:CDS | 40.0% | |
| TGCAAATGAGGTTCCTATGA+AGG | - | chr1_3:50396629-50396648 | Msa0123360:CDS | 40.0% | |
| !! | TATGTCAGGTTGGGAGTTAT+TGG | + | chr1_3:50396691-50396710 | None:intergenic | 40.0% |
| ATGTAACGGTATGTCAGGTT+GGG | + | chr1_3:50396700-50396719 | None:intergenic | 40.0% | |
| GATTGATGTAACGGTATGTC+AGG | + | chr1_3:50396705-50396724 | None:intergenic | 40.0% | |
| TGCTGCAGGTGTACTATTAT+GGG | + | chr1_3:50396727-50396746 | None:intergenic | 40.0% | |
| ATGCTGCAGGTGTACTATTA+TGG | + | chr1_3:50396728-50396747 | None:intergenic | 40.0% | |
| AGGATGTCTGCTAAACTGTT+CGG | + | chr1_3:50396788-50396807 | None:intergenic | 40.0% | |
| TTGATGAATGCCTATGGTAC+TGG | - | chr1_3:50396826-50396845 | Msa0123360:CDS | 40.0% | |
| !! | GGTTTGTTGCGGGTGAAAAT+AGG | + | chr1_3:50393691-50393710 | None:intergenic | 45.0% |
| ! | GTTTGAAATGGGGTGTAGAG+GGG | + | chr1_3:50393712-50393731 | None:intergenic | 45.0% |
| ! | GGTTTGAAATGGGGTGTAGA+GGG | + | chr1_3:50393713-50393732 | None:intergenic | 45.0% |
| ! | TGGTTTGAAATGGGGTGTAG+AGG | + | chr1_3:50393714-50393733 | None:intergenic | 45.0% |
| ! | GCTCAAAGCATTCAGTGAGA+TGG | - | chr1_3:50393843-50393862 | Msa0123360:CDS | 45.0% |
| !!! | AGGCTAATAGGGTTTTGGGT+AGG | - | chr1_3:50394094-50394113 | Msa0123360:intron | 45.0% |
| AATTGCACAGCATGAAGCAC+AGG | + | chr1_3:50394156-50394175 | None:intergenic | 45.0% | |
| GCTAATGTTAAGACGGCGAT+GGG | - | chr1_3:50394183-50394202 | Msa0123360:intron | 45.0% | |
| CTAATGTTAAGACGGCGATG+GGG | - | chr1_3:50394184-50394203 | Msa0123360:intron | 45.0% | |
| !! | AAGAGGCGCTAGAGAATCTT+CGG | - | chr1_3:50394214-50394233 | Msa0123360:intron | 45.0% |
| GAGGAAGATAGTGAGGAGTT+AGG | - | chr1_3:50394267-50394286 | Msa0123360:intron | 45.0% | |
| GATAGTGAGGAGTTAGGGAA+AGG | - | chr1_3:50394273-50394292 | Msa0123360:intron | 45.0% | |
| AGGAGTTAGGGAAAGGGAAT+AGG | - | chr1_3:50394280-50394299 | Msa0123360:intron | 45.0% | |
| GGAGTTAGGGAAAGGGAATA+GGG | - | chr1_3:50394281-50394300 | Msa0123360:intron | 45.0% | |
| GGCGCTTCCGTATTGTTTAA+AGG | - | chr1_3:50394344-50394363 | Msa0123360:intron | 45.0% | |
| CGCATGATAGGAAGCTTCTT+GGG | - | chr1_3:50394415-50394434 | Msa0123360:intron | 45.0% | |
| AAGAGAACAGATTACACCGG+TGG | - | chr1_3:50394746-50394765 | Msa0123360:intron | 45.0% | |
| TATGCCTCAGAAACTTCCAC+CGG | + | chr1_3:50394765-50394784 | None:intergenic | 45.0% | |
| !! | GGAAGTTTCTGAGGCATACT+CGG | - | chr1_3:50394767-50394786 | Msa0123360:intron | 45.0% |
| TGCGATTTCGTTGCTGAAGA+GGG | - | chr1_3:50394830-50394849 | Msa0123360:intron | 45.0% | |
| GTGTATCTGCAAGAATAGGG+TGG | - | chr1_3:50394901-50394920 | Msa0123360:intron | 45.0% | |
| GAACGGTTGAAAGAGAGCTT+TGG | - | chr1_3:50394981-50395000 | Msa0123360:intron | 45.0% | |
| !!! | GGTCCCAAACATTTTGGAGT+TGG | - | chr1_3:50395002-50395021 | Msa0123360:intron | 45.0% |
| TTTACGAGAACCTCTGAACC+GGG | + | chr1_3:50396297-50396316 | None:intergenic | 45.0% | |
| CTTTACGAGAACCTCTGAAC+CGG | + | chr1_3:50396298-50396317 | None:intergenic | 45.0% | |
| GCTGCTGAAACTCAATTGCA+AGG | + | chr1_3:50396506-50396525 | None:intergenic | 45.0% | |
| ATAGATGCTTGGGAAAGCCA+TGG | - | chr1_3:50396531-50396550 | Msa0123360:CDS | 45.0% | |
| GATGTAACGGTATGTCAGGT+TGG | + | chr1_3:50396701-50396720 | None:intergenic | 45.0% | |
| TAAACTGTTCGGGATTGACG+TGG | + | chr1_3:50396777-50396796 | None:intergenic | 45.0% | |
| GGATGTCTGCTAAACTGTTC+GGG | + | chr1_3:50396787-50396806 | None:intergenic | 45.0% | |
| ACGAGCGAGGTGAGAGAAAA+AGG | + | chr1_3:50393623-50393642 | None:intergenic | 50.0% | |
| !! | TAGGGTTGATGGATGCATCG+CGG | + | chr1_3:50393672-50393691 | None:intergenic | 50.0% |
| GCGGGTGAAAATAGGGTTGA+TGG | + | chr1_3:50393683-50393702 | None:intergenic | 50.0% | |
| ! | GGTCTGAAGCTTGATCGTGA+AGG | - | chr1_3:50393913-50393932 | Msa0123360:CDS | 50.0% |
| GAAGCTTGATCGTGAAGGTG+AGG | - | chr1_3:50393918-50393937 | Msa0123360:CDS | 50.0% | |
| GGCTAATGTTAAGACGGCGA+TGG | - | chr1_3:50394182-50394201 | Msa0123360:intron | 50.0% | |
| CTGTTGAGGTTGCGCATGAT+AGG | - | chr1_3:50394403-50394422 | Msa0123360:intron | 50.0% | |
| GCGCATGATAGGAAGCTTCT+TGG | - | chr1_3:50394414-50394433 | Msa0123360:intron | 50.0% | |
| TGGGATGGAGGATCATGAGA+AGG | - | chr1_3:50394449-50394468 | Msa0123360:intron | 50.0% | |
| !! | GGCGTTGGAGCAGAATGTTT+TGG | - | chr1_3:50394470-50394489 | Msa0123360:intron | 50.0% |
| GGGAGATACGATGAAGCTGT+TGG | - | chr1_3:50394576-50394595 | Msa0123360:intron | 50.0% | |
| !! | GGGGAAAGCGTTGTGTAATC+AGG | - | chr1_3:50394668-50394687 | Msa0123360:intron | 50.0% |
| TACACCGGTGGAAGTTTCTG+AGG | - | chr1_3:50394758-50394777 | Msa0123360:intron | 50.0% | |
| CTGCGATTTCGTTGCTGAAG+AGG | - | chr1_3:50394829-50394848 | Msa0123360:intron | 50.0% | |
| ! | GGGTGGTTGTTGTTGCTTAC+AGG | - | chr1_3:50394918-50394937 | Msa0123360:intron | 50.0% |
| GCTTACAGGTAAGGTGAAGC+AGG | - | chr1_3:50394932-50394951 | Msa0123360:intron | 50.0% | |
| ! | GGGGGCAGCATATTTAGAGT+TGG | - | chr1_3:50395043-50395062 | Msa0123360:intron | 50.0% |
| TGCGGTAGCCAAGGATATCA+TGG | - | chr1_3:50395094-50395113 | Msa0123360:intron | 50.0% | |
| GGTAGCCAAGGATATCATGG+AGG | - | chr1_3:50395097-50395116 | Msa0123360:intron | 50.0% | |
| GTGTGGGATTCAGATTCCAG+TGG | - | chr1_3:50395331-50395350 | Msa0123360:intron | 50.0% | |
| CCATGTGCAATTATGGGCTC+AGG | + | chr1_3:50396029-50396048 | None:intergenic | 50.0% | |
| CCTGAGCCCATAATTGCACA+TGG | - | chr1_3:50396026-50396045 | Msa0123360:CDS | 50.0% | |
| CGGTTCAGAGGTTCTCGTAA+AGG | - | chr1_3:50396296-50396315 | Msa0123360:CDS | 50.0% | |
| CTTCTTCTGCACTTGCTCCA+TGG | + | chr1_3:50396551-50396570 | None:intergenic | 50.0% | |
| GGAAAGGGAAGAGCCTTCAT+AGG | + | chr1_3:50396645-50396664 | None:intergenic | 50.0% | |
| !! | TGTGTCAGGTTGGGAGTTAC+TGG | + | chr1_3:50396751-50396770 | None:intergenic | 50.0% |
| AAGATGAAGCTCGACGAGCG+AGG | + | chr1_3:50393636-50393655 | None:intergenic | 55.0% | |
| ! | TTGATGGATGCATCGCGGAG+AGG | + | chr1_3:50393667-50393686 | None:intergenic | 55.0% |
| !! | GGTGTAGAGGGGTTTGTTGC+GGG | + | chr1_3:50393701-50393720 | None:intergenic | 55.0% |
| !! | GGGTGTAGAGGGGTTTGTTG+CGG | + | chr1_3:50393702-50393721 | None:intergenic | 55.0% |
| ATGTTAAGACGGCGATGGGG+AGG | - | chr1_3:50394187-50394206 | Msa0123360:intron | 55.0% | |
| ! | GGAGGATCATGAGAAGGCGT+TGG | - | chr1_3:50394455-50394474 | Msa0123360:intron | 55.0% |
| ! | AACATCTGCGCTGCTGACTG+AGG | + | chr1_3:50395074-50395093 | None:intergenic | 55.0% |
| GTCAGCAGCGCAGATGTTTG+CGG | - | chr1_3:50395076-50395095 | Msa0123360:intron | 55.0% | |
| GCAGATGTTTGCGGTAGCCA+AGG | - | chr1_3:50395085-50395104 | Msa0123360:intron | 55.0% | |
| CTTGGTTGTTCCCGGTTCAG+AGG | - | chr1_3:50396284-50396303 | Msa0123360:CDS | 55.0% | |
| CTCATTTGCAGAGACACCGC+GGG | + | chr1_3:50396619-50396638 | None:intergenic | 55.0% | |
| CCTCATTTGCAGAGACACCG+CGG | + | chr1_3:50396620-50396639 | None:intergenic | 55.0% | |
| TGGGAGTTACTGGATGCTGC+AGG | + | chr1_3:50396741-50396760 | None:intergenic | 55.0% | |
| ACTGTTCGGGATTGACGTGG+CGG | + | chr1_3:50396774-50396793 | None:intergenic | 55.0% | |
| GCTCCCACAAGAGCAGCACT+CGG | - | chr1_3:50394872-50394891 | Msa0123360:intron | 60.0% | |
| ! | CCTCCGAGTGCTGCTCTTGT+GGG | + | chr1_3:50394878-50394897 | None:intergenic | 60.0% |
| CCACAAGAGCAGCACTCGGA+GGG | - | chr1_3:50394876-50394895 | Msa0123360:intron | 60.0% | |
| CCGCGGTGTCTCTGCAAATG+AGG | - | chr1_3:50396617-50396636 | Msa0123360:CDS | 60.0% | |
| ACGTGGCGGTGTGTCAGGTT+GGG | + | chr1_3:50396760-50396779 | None:intergenic | 60.0% | |
| GATTGACGTGGCGGTGTGTC+AGG | + | chr1_3:50396765-50396784 | None:intergenic | 60.0% | |
| GGCGATGGGGAGGAGAGAAG+AGG | - | chr1_3:50394197-50394216 | Msa0123360:intron | 65.0% | |
| CCCACAAGAGCAGCACTCGG+AGG | - | chr1_3:50394875-50394894 | Msa0123360:intron | 65.0% | |
| ! | CCCTCCGAGTGCTGCTCTTG+TGG | + | chr1_3:50394879-50394898 | None:intergenic | 65.0% |
| GACGTGGCGGTGTGTCAGGT+TGG | + | chr1_3:50396761-50396780 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 50393595 | 50397008 | 50393595 | ID=Msa0123360;Name=Msa0123360 |
| chr1_3 | mRNA | 50393595 | 50397008 | 50393595 | ID=Msa0123360-mRNA-1;Parent=Msa0123360;Name=Msa0123360-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|211|633 |
| chr1_3 | exon | 50393595 | 50394106 | 50393595 | ID=Msa0123360-mRNA-1:exon:15423;Parent=Msa0123360-mRNA-1 |
| chr1_3 | exon | 50395408 | 50397008 | 50395408 | ID=Msa0123360-mRNA-1:exon:15422;Parent=Msa0123360-mRNA-1 |
| chr1_3 | CDS | 50395408 | 50397008 | 50395408 | ID=Msa0123360-mRNA-1:cds;Parent=Msa0123360-mRNA-1 |
| chr1_3 | CDS | 50393806 | 50394106 | 50393806 | ID=Msa0123360-mRNA-1:cds;Parent=Msa0123360-mRNA-1 |
| chr1_3 | three_prime_UTR | 50393595 | 50393805 | 50393595 | ID=Msa0123360-mRNA-1:three_prime_utr;Parent=Msa0123360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
