Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241460 | KEH37077.1 | 98.312 | 237 | 4 | 0 | 1 | 237 | 13 | 249 | 4.64e-172 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241460 | sp|O48916|FAH1_ARATH | 75.424 | 236 | 58 | 0 | 1 | 236 | 1 | 236 | 3.85e-133 | 377 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241460 | A0A072V5H1 | 98.312 | 237 | 4 | 0 | 1 | 237 | 13 | 249 | 2.22e-172 | 483 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0140520 | Msa0241460 | 0.805221 | 1.482057e-49 | -8.615850e-47 |
| Msa0196020 | Msa0241460 | 0.826163 | 3.153380e-54 | -8.615850e-47 |
| Msa0223380 | Msa0241460 | -0.812400 | 4.321094e-51 | -8.615850e-47 |
| Msa0241460 | Msa0279210 | 0.897075 | 1.998464e-76 | -8.615850e-47 |
| Msa0241460 | Msa0279250 | 0.898667 | 4.239960e-77 | -8.615850e-47 |
| Msa0241460 | Msa0318970 | 0.895085 | 1.339731e-75 | -8.615850e-47 |
| Msa0241460 | Msa0388030 | 0.818690 | 1.718599e-52 | -8.615850e-47 |
| Msa0241460 | Msa0394410 | 0.828288 | 9.770417e-55 | -8.615850e-47 |
| Msa0241460 | Msa0491520 | -0.805832 | 1.103568e-49 | -8.615850e-47 |
| Msa0241460 | Msa0505060 | -0.802242 | 6.157173e-49 | -8.615850e-47 |
| Msa0241460 | Msa0575990 | 0.802248 | 6.140097e-49 | -8.615850e-47 |
| Msa0241460 | Msa0576100 | 0.808692 | 2.733124e-50 | -8.615850e-47 |
| Msa0241460 | Msa0657460 | 0.802098 | 6.591898e-49 | -8.615850e-47 |
| Msa0241460 | Msa0864470 | 0.818875 | 1.560329e-52 | -8.615850e-47 |
| Msa0241460 | Msa1135880 | -0.804099 | 2.541011e-49 | -8.615850e-47 |
| Msa0241460 | Msa1207460 | 0.841604 | 4.295459e-58 | -8.615850e-47 |
| Msa0241460 | Msa1228160 | 0.816672 | 4.900785e-52 | -8.615850e-47 |
| Msa0241460 | Msa1236070 | 0.811768 | 5.935291e-51 | -8.615850e-47 |
| Msa0241460 | Msa1257640 | 0.813297 | 2.749043e-51 | -8.615850e-47 |
| Msa0241460 | Msa1300860 | -0.804472 | 2.125370e-49 | -8.615850e-47 |
| Msa0241460 | Msa1308330 | 0.823788 | 1.146932e-53 | -8.615850e-47 |
| Msa0241460 | Msa1331920 | -0.807047 | 6.115608e-50 | -8.615850e-47 |
| Msa0241460 | Msa1442220 | 0.806353 | 8.570448e-50 | -8.615850e-47 |
| Msa0241460 | Msa1459760 | 0.802183 | 6.329852e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241460 | MtrunA17_Chr2g0292941 | 98.312 | 237 | 4 | 0 | 1 | 237 | 1 | 237 | 1.51e-175 | 481 |
| Msa0241460 | MtrunA17_Chr4g0051591 | 68.644 | 236 | 73 | 1 | 1 | 235 | 1 | 236 | 8.39e-114 | 325 |
| Msa0241460 | MtrunA17_Chr4g0051581 | 69.128 | 149 | 46 | 0 | 1 | 149 | 1 | 149 | 3.06e-67 | 205 |
| Msa0241460 | MtrunA17_Chr4g0051571 | 65.217 | 92 | 31 | 1 | 145 | 235 | 4 | 95 | 2.49e-38 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241460 | AT2G34770.1 | 75.424 | 236 | 58 | 0 | 1 | 236 | 1 | 236 | 3.91e-134 | 377 |
| Msa0241460 | AT4G20870.2 | 71.186 | 236 | 68 | 0 | 1 | 236 | 1 | 236 | 1.36e-125 | 355 |
| Msa0241460 | AT4G20870.1 | 71.186 | 236 | 68 | 0 | 1 | 236 | 1 | 236 | 1.36e-125 | 355 |
Find 109 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTTGGCGGTGGCTTAC+TGG | 0.121516 | 2_2:+17022114 | Msa0241460:CDS |
| TCAACTACTCCTGCTTTATT+TGG | 0.215512 | 2_2:+17022100 | Msa0241460:CDS |
| AAGCATGTAAATTTACTGTT+AGG | 0.251857 | 2_2:+17022740 | Msa0241460:exon |
| AGGATCCAAGATAAAGGATT+TGG | 0.271287 | 2_2:+17022654 | Msa0241460:CDS |
| TTTCGGGGATGTTCAGTCTT+TGG | 0.281707 | 2_2:-17022184 | None:intergenic |
| GGTGGGCAATACCAGTTATT+TGG | 0.282521 | 2_2:+17020474 | Msa0241460:CDS |
| GTGAGAGTGAACGTAGAAAA+AGG | 0.296070 | 2_2:-17018377 | None:intergenic |
| CTTTACAATGTGTTCACAAT+TGG | 0.330838 | 2_2:-17022903 | None:intergenic |
| GACCATGGTGCAAGTAATAA+TGG | 0.337316 | 2_2:-17022159 | None:intergenic |
| TGGGATCACTTCATCACTTT+GGG | 0.338931 | 2_2:+17022674 | Msa0241460:CDS |
| GCTCCACAATTGATGTTTGC+GGG | 0.354380 | 2_2:+17022837 | Msa0241460:three_prime_UTR |
| CACTTTAGGATCCAAGATAA+AGG | 0.360540 | 2_2:+17022648 | Msa0241460:CDS |
| AACAGCTATATTATTGTTCC+CGG | 0.368539 | 2_2:+17021092 | Msa0241460:CDS |
| GTTCTATAGGTTGGACATCT+TGG | 0.372108 | 2_2:+17019763 | Msa0241460:intron |
| TGATCCCAAATCCTTTATCT+TGG | 0.378096 | 2_2:-17022659 | None:intergenic |
| ATAGCTCTGATGGTGGTTCT+TGG | 0.379060 | 2_2:+17020557 | Msa0241460:CDS |
| ACCACTTGAACCATCACTTT+AGG | 0.386667 | 2_2:+17022634 | Msa0241460:CDS |
| TGTATATAACTCTATACAAA+TGG | 0.396707 | 2_2:+17020517 | Msa0241460:CDS |
| GAAGTAAAATCACAGCAAAA+AGG | 0.398929 | 2_2:-17022964 | None:intergenic |
| GGATCCAAGATAAAGGATTT+GGG | 0.400632 | 2_2:+17022655 | Msa0241460:CDS |
| AGCATGTAAATTTACTGTTA+GGG | 0.401645 | 2_2:+17022741 | Msa0241460:exon |
| ACAACTGGAAGCCAAATAAC+TGG | 0.431941 | 2_2:-17020485 | None:intergenic |
| TATACAAACCAACATACAAC+TGG | 0.433560 | 2_2:-17020500 | None:intergenic |
| TTATTTGGCGGTGGCTTACT+GGG | 0.435203 | 2_2:+17022115 | Msa0241460:CDS |
| TTGGGATCACTTCATCACTT+TGG | 0.444052 | 2_2:+17022673 | Msa0241460:CDS |
| TGCTCCACAATTGATGTTTG+CGG | 0.448035 | 2_2:+17022836 | Msa0241460:three_prime_UTR |
| AACCATCCATGGGGTGTTTG+TGG | 0.448233 | 2_2:-17021044 | None:intergenic |
| GGGGTATAAGAGAGATGATC+TGG | 0.448716 | 2_2:-17018304 | None:intergenic |
| ACTACTCCTGCTTTATTTGG+CGG | 0.450026 | 2_2:+17022103 | Msa0241460:CDS |
| AGAATATGTTACAAGGTTTG+TGG | 0.457749 | 2_2:+17022927 | Msa0241460:three_prime_UTR |
| TCCCCGTTTCTTTCAAAATG+AGG | 0.458220 | 2_2:+17019834 | Msa0241460:CDS |
| AGTCCTTGACCCTCACTGTC+TGG | 0.464818 | 2_2:+17020453 | Msa0241460:intron |
| AGAGAATAAACTCTTCAAGA+TGG | 0.465942 | 2_2:-17018268 | None:intergenic |
| AAAGTCCTGGGCAACCATCT+TGG | 0.468070 | 2_2:-17019536 | None:intergenic |
| GTGTTTCTCGCTGCCGTGCA+CGG | 0.472594 | 2_2:+17018422 | Msa0241460:five_prime_UTR |
| TCAAATCAACTACAAAGTCC+TGG | 0.474615 | 2_2:-17019549 | None:intergenic |
| CGTTGACAGACTGGCTGCAT+GGG | 0.475217 | 2_2:-17018237 | None:intergenic |
| GGACCTTCCTTGCTAACAAT+GGG | 0.475219 | 2_2:-17019814 | None:intergenic |
| GAATCTAGCCGTTGACAGAC+TGG | 0.475725 | 2_2:-17018246 | None:intergenic |
| TTTGGCTTCCAGTTGTATGT+TGG | 0.477885 | 2_2:+17020492 | Msa0241460:CDS |
| AATGCAGGTGGAATCGAAAT+CGG | 0.483105 | 2_2:-17018463 | None:intergenic |
| AACAAGTCTCAAACCATCCA+TGG | 0.483587 | 2_2:-17021055 | None:intergenic |
| CCGTTGACAGACTGGCTGCA+TGG | 0.483782 | 2_2:-17018238 | None:intergenic |
| CTGTCCTCATATAGCTCTGA+TGG | 0.487299 | 2_2:+17020547 | Msa0241460:CDS |
| ACATTAAAACAAAGACCTAC+TGG | 0.502397 | 2_2:+17020630 | Msa0241460:CDS |
| CAGCCCATTGTTAGCAAGGA+AGG | 0.502882 | 2_2:+17019811 | Msa0241460:CDS |
| CCTTGACCCTCACTGTCTGG+TGG | 0.505883 | 2_2:+17020456 | Msa0241460:CDS |
| CAGCACCAAGATGGTTGCCC+AGG | 0.518070 | 2_2:+17019531 | Msa0241460:intron |
| AAGCCTGTACCTGGAAAACA+AGG | 0.518297 | 2_2:-17019579 | None:intergenic |
| AATATAGCTGTTGCAGTAGG+AGG | 0.519735 | 2_2:-17021081 | None:intergenic |
| GGGACCTTCCTTGCTAACAA+TGG | 0.525396 | 2_2:-17019815 | None:intergenic |
| GTATATAACTCTATACAAAT+GGG | 0.525508 | 2_2:+17020518 | Msa0241460:CDS |
| GCCATGTAGAAGATAATGTA+TGG | 0.525715 | 2_2:-17021016 | None:intergenic |
| AGCAGGAGTAGTTGAAGGGG+TGG | 0.532131 | 2_2:-17022092 | None:intergenic |
| ACCATGGTGCAAGTAATAAT+GGG | 0.532977 | 2_2:-17022158 | None:intergenic |
| ACTCCTGCTTTATTTGGCGG+TGG | 0.533512 | 2_2:+17022106 | Msa0241460:CDS |
| TATCTTGGATCCTAAAGTGA+TGG | 0.534098 | 2_2:-17022644 | None:intergenic |
| CTGTTAGGGATAGCATATGT+TGG | 0.535455 | 2_2:+17022755 | Msa0241460:three_prime_UTR |
| TAGGGATAGCATATGTTGGT+TGG | 0.535897 | 2_2:+17022759 | Msa0241460:three_prime_UTR |
| GTGATGAGGCAATGATTTAG+TGG | 0.536110 | 2_2:-17018325 | None:intergenic |
| CTTGACCCTCACTGTCTGGT+GGG | 0.548253 | 2_2:+17020457 | Msa0241460:CDS |
| AATAAAGCAGGAGTAGTTGA+AGG | 0.548583 | 2_2:-17022097 | None:intergenic |
| CAAATCAACTACAAAGTCCT+GGG | 0.550444 | 2_2:-17019548 | None:intergenic |
| TTTGGCGTTCAGCACCAAGA+TGG | 0.551359 | 2_2:+17019522 | Msa0241460:intron |
| GTTTATTCTCTTAAATCGAA+CGG | 0.555588 | 2_2:+17018280 | Msa0241460:five_prime_UTR |
| CTTTCAAAATGAGGTTCTAG+AGG | 0.555614 | 2_2:+17019843 | Msa0241460:CDS |
| TTGGTGAAGCTTATGAAGAG+TGG | 0.555652 | 2_2:+17019782 | Msa0241460:CDS |
| AAGCCACCGCCAAATAAAGC+AGG | 0.556526 | 2_2:-17022109 | None:intergenic |
| AATGATTAGACAGATAAAAG+AGG | 0.560820 | 2_2:-17022808 | None:intergenic |
| GTAAAGTAGAATATGTTACA+AGG | 0.561088 | 2_2:+17022920 | Msa0241460:three_prime_UTR |
| GGCGCAGTTCTCATCGCTCA+CGG | 0.565898 | 2_2:+17018400 | Msa0241460:five_prime_UTR |
| AACACTTCCTTCCTCAAAAG+CGG | 0.566327 | 2_2:+17022710 | Msa0241460:CDS |
| TCATCAGCCCATTGTTAGCA+AGG | 0.566774 | 2_2:+17019807 | Msa0241460:CDS |
| GTTCAGTCTTTGGCTGACCA+TGG | 0.566911 | 2_2:-17022174 | None:intergenic |
| TGGTGAAGCTTATGAAGAGT+GGG | 0.567564 | 2_2:+17019783 | Msa0241460:CDS |
| ACAAGTCTCAAACCATCCAT+GGG | 0.570404 | 2_2:-17021054 | None:intergenic |
| TCCTAAAGTGATGGTTCAAG+TGG | 0.570815 | 2_2:-17022635 | None:intergenic |
| CACCACAAACACCCCATGGA+TGG | 0.571556 | 2_2:+17021042 | Msa0241460:CDS |
| ATATGTTACAAGGTTTGTGG+TGG | 0.575339 | 2_2:+17022930 | Msa0241460:three_prime_UTR |
| ACCACCATCAGAGCTATATG+AGG | 0.581427 | 2_2:-17020551 | None:intergenic |
| CCATGCAGCCAGTCTGTCAA+CGG | 0.584957 | 2_2:+17018238 | Msa0241460:five_prime_UTR |
| TGATGAGGCAATGATTTAGT+GGG | 0.590628 | 2_2:-17018324 | None:intergenic |
| GATCGAAGAAGCGCCGTGCA+CGG | 0.594362 | 2_2:-17018435 | None:intergenic |
| CTCCACAATTGATGTTTGCG+GGG | 0.596265 | 2_2:+17022838 | Msa0241460:three_prime_UTR |
| AATAATATAGCTGTTGCAGT+AGG | 0.598883 | 2_2:-17021084 | None:intergenic |
| CTGCCACCACAAACACCCCA+TGG | 0.603098 | 2_2:+17021038 | Msa0241460:CDS |
| ATATAGCTGTTGCAGTAGGA+GGG | 0.606939 | 2_2:-17021080 | None:intergenic |
| GTTGACAGACTGGCTGCATG+GGG | 0.610822 | 2_2:-17018236 | None:intergenic |
| CAGTAAGAAGAAAACAATGC+AGG | 0.613263 | 2_2:-17018478 | None:intergenic |
| ATAAAGCAGGAGTAGTTGAA+GGG | 0.615938 | 2_2:-17022096 | None:intergenic |
| GATGAGGCAATGATTTAGTG+GGG | 0.616982 | 2_2:-17018323 | None:intergenic |
| TAAGAAGAAAACAATGCAGG+TGG | 0.617945 | 2_2:-17018475 | None:intergenic |
| ACCATACATTATCTTCTACA+TGG | 0.618370 | 2_2:+17021015 | Msa0241460:CDS |
| AACCCCGCAAACATCAATTG+TGG | 0.619268 | 2_2:-17022840 | None:intergenic |
| GCCTGTACCTGGAAAACAAG+GGG | 0.619950 | 2_2:-17019577 | None:intergenic |
| ACCCATTATTACTTGCACCA+TGG | 0.623569 | 2_2:+17022157 | Msa0241460:CDS |
| TGAACATCCCCGAAACCTGA+AGG | 0.626671 | 2_2:+17022192 | Msa0241460:CDS |
| CATCCATGGGGTGTTTGTGG+TGG | 0.632413 | 2_2:-17021041 | None:intergenic |
| CGGACTCCAGTTCTGGAACG+TGG | 0.633072 | 2_2:+17022057 | Msa0241460:intron |
| TCCTCATATAGCTCTGATGG+TGG | 0.637299 | 2_2:+17020550 | Msa0241460:CDS |
| CCACCAGACAGTGAGGGTCA+AGG | 0.641225 | 2_2:-17020456 | None:intergenic |
| GCGTGTTGTGTTGAGTGATG+AGG | 0.662809 | 2_2:-17018339 | None:intergenic |
| GAGCTATATGAGGACAGCTG+AGG | 0.663833 | 2_2:-17020541 | None:intergenic |
| TATTGCCCACCAGACAGTGA+GGG | 0.672832 | 2_2:-17020462 | None:intergenic |
| TAAAGCAGGAGTAGTTGAAG+GGG | 0.675171 | 2_2:-17022095 | None:intergenic |
| GTATTGCCCACCAGACAGTG+AGG | 0.692936 | 2_2:-17020463 | None:intergenic |
| TTGACAGACTGGCTGCATGG+GGG | 0.698205 | 2_2:-17018235 | None:intergenic |
| AGCCTGTACCTGGAAAACAA+GGG | 0.717048 | 2_2:-17019578 | None:intergenic |
| CAAGTCTCAAACCATCCATG+GGG | 0.739606 | 2_2:-17021053 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATATATATAATT+GGG | - | chr2_2:17019258-17019277 | None:intergenic | 0.0% |
| !! | TTAAAAAAAATATATATAAT+TGG | - | chr2_2:17019259-17019278 | None:intergenic | 0.0% |
| !!! | CATAATTTTTTTTTTTGTTT+TGG | + | chr2_2:17019086-17019105 | Msa0241460:intron | 10.0% |
| !!! | TTAATTTTATGTGTAAATTT+AGG | + | chr2_2:17019671-17019690 | Msa0241460:intron | 10.0% |
| !!! | TTTATAAAAAAACAAGTTTT+TGG | + | chr2_2:17019972-17019991 | Msa0241460:intron | 10.0% |
| !!! | TTTTTTAAATTTGTTCAATT+TGG | + | chr2_2:17021422-17021441 | Msa0241460:intron | 10.0% |
| !! | TAAGTACTAATAATCTAATT+GGG | - | chr2_2:17019286-17019305 | None:intergenic | 15.0% |
| !!! | GATTAACACTTTTTTATTTT+TGG | + | chr2_2:17019504-17019523 | Msa0241460:intron | 15.0% |
| !!! | ACAAATTTTTAATGTTCTAT+AGG | + | chr2_2:17019750-17019769 | Msa0241460:intron | 15.0% |
| !!! | TTTTCTAGTTATATAACTTT+TGG | + | chr2_2:17020263-17020282 | Msa0241460:intron | 15.0% |
| !!! | TTTCTAGTTATATAACTTTT+GGG | + | chr2_2:17020264-17020283 | Msa0241460:intron | 15.0% |
| !! | TAATGTGGTTAATTATTAAA+AGG | - | chr2_2:17020354-17020373 | None:intergenic | 15.0% |
| !!! | CAATAAAGTATTTGAAAATT+CGG | - | chr2_2:17021143-17021162 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTATTATGACAAA+TGG | + | chr2_2:17021528-17021547 | Msa0241460:intron | 15.0% |
| !!! | CAAATTATGTTTTTAAACAA+TGG | - | chr2_2:17021604-17021623 | None:intergenic | 15.0% |
| !! | CATTGTTTAAAAACATAATT+TGG | + | chr2_2:17021602-17021621 | Msa0241460:intron | 15.0% |
| !! | AATATAAATAAGATACGTAA+TGG | + | chr2_2:17022457-17022476 | Msa0241460:intron | 15.0% |
| !!! | AATATTTTTTAGGATTGTGA+AGG | + | chr2_2:17018794-17018813 | Msa0241460:intron | 20.0% |
| !!! | GACAGAAGAAATTTTAATTT+GGG | + | chr2_2:17019012-17019031 | Msa0241460:intron | 20.0% |
| !! | GACAGTATATAATATATACA+GGG | - | chr2_2:17019185-17019204 | None:intergenic | 20.0% |
| !! | CTAAGTACTAATAATCTAAT+TGG | - | chr2_2:17019287-17019306 | None:intergenic | 20.0% |
| !! | TATGAAGAACAAAATATGTT+AGG | - | chr2_2:17019416-17019435 | None:intergenic | 20.0% |
| !! | CAATTCAATGATAAAAACAA+TGG | - | chr2_2:17019470-17019489 | None:intergenic | 20.0% |
| !!! | CATTGTTTTTATCATTGAAT+TGG | + | chr2_2:17019468-17019487 | Msa0241460:intron | 20.0% |
| !!! | TTTTTGAAAGAGGATTTTTA+CGG | - | chr2_2:17019608-17019627 | None:intergenic | 20.0% |
| !!! | TACATAACATTTGAAATCTA+AGG | - | chr2_2:17019646-17019665 | None:intergenic | 20.0% |
| !!! | ATTTTTAATGTTCTATAGGT+TGG | + | chr2_2:17019754-17019773 | Msa0241460:intron | 20.0% |
| !! | ATAAATCCAATATCATTAAC+TGG | - | chr2_2:17019957-17019976 | None:intergenic | 20.0% |
| !!! | AGATAGCGAAATAATTTTTT+CGG | - | chr2_2:17020064-17020083 | None:intergenic | 20.0% |
| !! | TGTATATAACTCTATACAAA+TGG | + | chr2_2:17020517-17020536 | Msa0241460:CDS | 20.0% |
| !! | GTATATAACTCTATACAAAT+GGG | + | chr2_2:17020518-17020537 | Msa0241460:CDS | 20.0% |
| !!! | TTTTAATGTGGAAAAGAAAA+CGG | - | chr2_2:17020619-17020638 | None:intergenic | 20.0% |
| !!! | TAAGTTGATTTAAGAAATGT+TGG | + | chr2_2:17020699-17020718 | Msa0241460:intron | 20.0% |
| !!! | CATGTATTTTATTACGATAA+TGG | - | chr2_2:17020746-17020765 | None:intergenic | 20.0% |
| !!! | CGAATTTTCAAATACTTTAT+TGG | + | chr2_2:17021141-17021160 | Msa0241460:intron | 20.0% |
| !!! | TTTTTATCATGAATTCTTCT+TGG | + | chr2_2:17021191-17021210 | Msa0241460:intron | 20.0% |
| !!! | ATTTCATGAAAATTTGTTGT+AGG | - | chr2_2:17021482-17021501 | None:intergenic | 20.0% |
| !! | ACTTAAATAGTAAGATTAGA+TGG | + | chr2_2:17021553-17021572 | Msa0241460:intron | 20.0% |
| !! | GTTTAAAAACATAATTTGGA+AGG | + | chr2_2:17021606-17021625 | Msa0241460:intron | 20.0% |
| !!! | CTGTTTTAAAAACAAATATC+CGG | - | chr2_2:17021667-17021686 | None:intergenic | 20.0% |
| !!! | AATTTGCATTTAATTTCATG+TGG | + | chr2_2:17021728-17021747 | Msa0241460:intron | 20.0% |
| !!! | ATTTGCATTTAATTTCATGT+GGG | + | chr2_2:17021729-17021748 | Msa0241460:intron | 20.0% |
| !!! | ATTTTATAACCTTCTTTGAT+AGG | + | chr2_2:17021788-17021807 | Msa0241460:intron | 20.0% |
| !!! | AAACAATAAATTGTTGTTTC+TGG | + | chr2_2:17021821-17021840 | Msa0241460:intron | 20.0% |
| !! | ATATTGACATATCTATATTG+AGG | - | chr2_2:17021965-17021984 | None:intergenic | 20.0% |
| !! | CAATATAGATATGTCAATAT+TGG | + | chr2_2:17021965-17021984 | Msa0241460:intron | 20.0% |
| !! | TCCAATAAAAATCAATGAAA+AGG | + | chr2_2:17022304-17022323 | Msa0241460:intron | 20.0% |
| !!! | TCCTTTTCATTGATTTTTAT+TGG | - | chr2_2:17022308-17022327 | None:intergenic | 20.0% |
| !!! | CTTCTATCACTTTATTTATT+TGG | + | chr2_2:17022527-17022546 | Msa0241460:intron | 20.0% |
| !!! | TTTATTTATTTGGTACCTTT+TGG | + | chr2_2:17022537-17022556 | Msa0241460:intron | 20.0% |
| !! | ACCAAAAAATTAACGAAAAA+TGG | - | chr2_2:17022872-17022891 | None:intergenic | 20.0% |
| ! | GTTTATTCTCTTAAATCGAA+CGG | + | chr2_2:17018280-17018299 | Msa0241460:five_prime_UTR | 25.0% |
| !! | ATTGTTTTCTTCTTACTGTT+CGG | + | chr2_2:17018483-17018502 | Msa0241460:five_prime_UTR | 25.0% |
| ! | ACGAAACAAAAATCGAAATT+AGG | - | chr2_2:17018596-17018615 | None:intergenic | 25.0% |
| !!! | TTTTGATGTATTTTTTGCAC+TGG | + | chr2_2:17018850-17018869 | Msa0241460:intron | 25.0% |
| !!! | GGACAGAAGAAATTTTAATT+TGG | + | chr2_2:17019011-17019030 | Msa0241460:intron | 25.0% |
| !! | ACATTTTAAATGTAGAGAAG+TGG | + | chr2_2:17019136-17019155 | Msa0241460:intron | 25.0% |
| !! | CATTTTAAATGTAGAGAAGT+GGG | + | chr2_2:17019137-17019156 | Msa0241460:intron | 25.0% |
| ! | TATATAATATATACAGGGCT+GGG | - | chr2_2:17019180-17019199 | None:intergenic | 25.0% |
| ! | GGACAGTATATAATATATAC+AGG | - | chr2_2:17019186-17019205 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGAGGATTTTTAC+GGG | - | chr2_2:17019607-17019626 | None:intergenic | 25.0% |
| ! | CACATGAACAATATAAGATT+AGG | - | chr2_2:17020215-17020234 | None:intergenic | 25.0% |
| !!! | GTTATATAACTTTTGGGTAA+AGG | + | chr2_2:17020270-17020289 | Msa0241460:intron | 25.0% |
| ! | TATCGTAATAAAATACATGC+CGG | + | chr2_2:17020747-17020766 | Msa0241460:intron | 25.0% |
| ! | TGTCTCACTATATAAAAAGT+GGG | + | chr2_2:17020789-17020808 | Msa0241460:intron | 25.0% |
| !!! | CATTTAACCAAAAAGCATTA+CGG | - | chr2_2:17020979-17020998 | None:intergenic | 25.0% |
| !!! | TTTTGGTTAAATGTTGCTTT+AGG | + | chr2_2:17020986-17021005 | Msa0241460:intron | 25.0% |
| !!! | TTTGGTTAAATGTTGCTTTA+GGG | + | chr2_2:17020987-17021006 | Msa0241460:intron | 25.0% |
| ! | ATATGGCAAAAAATAGATAC+CGG | - | chr2_2:17021114-17021133 | None:intergenic | 25.0% |
| ! | TGAAAATTCGGCATATAATA+TGG | - | chr2_2:17021131-17021150 | None:intergenic | 25.0% |
| ! | AAAAAAACTAATTGCTCTGT+TGG | - | chr2_2:17021234-17021253 | None:intergenic | 25.0% |
| !!! | CACAGGTTTTTTAATTAGAT+AGG | - | chr2_2:17021388-17021407 | None:intergenic | 25.0% |
| ! | CTATCTAATTAAAAAACCTG+TGG | + | chr2_2:17021386-17021405 | Msa0241460:intron | 25.0% |
| ! | GAAAAAAAATTGAACCTGAT+TGG | - | chr2_2:17021460-17021479 | None:intergenic | 25.0% |
| ! | TTCATGAAATTACTCCTTTA+AGG | + | chr2_2:17021492-17021511 | Msa0241460:intron | 25.0% |
| ! | AAAATTCCATGAAGTAATGT+TGG | + | chr2_2:17022020-17022039 | Msa0241460:intron | 25.0% |
| !! | GATTTTGCTTAGCAAAATAT+TGG | - | chr2_2:17022277-17022296 | None:intergenic | 25.0% |
| ! | TCTACTGAAATTGTAATAAC+TGG | - | chr2_2:17022352-17022371 | None:intergenic | 25.0% |
| ! | TTGAAGACAAAGTTAAAAGA+AGG | - | chr2_2:17022439-17022458 | None:intergenic | 25.0% |
| ! | AAGCATGTAAATTTACTGTT+AGG | + | chr2_2:17022740-17022759 | Msa0241460:exon | 25.0% |
| ! | AGCATGTAAATTTACTGTTA+GGG | + | chr2_2:17022741-17022760 | Msa0241460:exon | 25.0% |
| ! | AATGATTAGACAGATAAAAG+AGG | - | chr2_2:17022811-17022830 | None:intergenic | 25.0% |
| !!! | GCCATTTTTCGTTAATTTTT+TGG | + | chr2_2:17022868-17022887 | Msa0241460:three_prime_UTR | 25.0% |
| ! | GTAAAGTAGAATATGTTACA+AGG | + | chr2_2:17022920-17022939 | Msa0241460:three_prime_UTR | 25.0% |
| AGAGAATAAACTCTTCAAGA+TGG | - | chr2_2:17018271-17018290 | None:intergenic | 30.0% | |
| GCAAAATCGGATCTAAAAAT+CGG | - | chr2_2:17018530-17018549 | None:intergenic | 30.0% | |
| TGCTGAAACAAAAGCAAAAT+CGG | - | chr2_2:17018543-17018562 | None:intergenic | 30.0% | |
| TAGTAAGATGAAAACGACTA+TGG | + | chr2_2:17018953-17018972 | Msa0241460:intron | 30.0% | |
| !! | TGTAAGGGTGTTTATTAGAT+GGG | + | chr2_2:17018990-17019009 | Msa0241460:intron | 30.0% |
| ATATAATATATACAGGGCTG+GGG | - | chr2_2:17019179-17019198 | None:intergenic | 30.0% | |
| GTATATAATATATACAGGGC+TGG | - | chr2_2:17019181-17019200 | None:intergenic | 30.0% | |
| AAAAACAATGGCAACAGTAA+TGG | - | chr2_2:17019458-17019477 | None:intergenic | 30.0% | |
| !! | CATGGAGAAATTTTTGAAAG+AGG | - | chr2_2:17019618-17019637 | None:intergenic | 30.0% |
| TTGAAATCTAAGGAATGACA+TGG | - | chr2_2:17019636-17019655 | None:intergenic | 30.0% | |
| !! | AACCTCATTTTGAAAGAAAC+GGG | - | chr2_2:17019839-17019858 | None:intergenic | 30.0% |
| !! | GAACCTCATTTTGAAAGAAA+CGG | - | chr2_2:17019840-17019859 | None:intergenic | 30.0% |
| ! | TGGTAAAAATGTTTAGAGCA+AGG | + | chr2_2:17019992-17020011 | Msa0241460:intron | 30.0% |
| !!! | TAATTTTTTCGGAGGAACTA+CGG | - | chr2_2:17020053-17020072 | None:intergenic | 30.0% |
| !!! | TAGCGAAATAATTTTTTCGG+AGG | - | chr2_2:17020061-17020080 | None:intergenic | 30.0% |
| !!! | CACATGTCTACTTTTTATCA+GGG | + | chr2_2:17020086-17020105 | Msa0241460:intron | 30.0% |
| AGTTTCATCATGTGAGAAAA+AGG | - | chr2_2:17020123-17020142 | None:intergenic | 30.0% | |
| AGATTAGGAGTGATTATTCA+GGG | - | chr2_2:17020200-17020219 | None:intergenic | 30.0% | |
| AAGATTAGGAGTGATTATTC+AGG | - | chr2_2:17020201-17020220 | None:intergenic | 30.0% | |
| !! | AGGTTTCCTTTGATTTTGAT+TGG | + | chr2_2:17020290-17020309 | Msa0241460:intron | 30.0% |
| AACATGCCAATCAAAATCAA+AGG | - | chr2_2:17020299-17020318 | None:intergenic | 30.0% | |
| ATCTTCATTTGCTTGTAATG+TGG | - | chr2_2:17020369-17020388 | None:intergenic | 30.0% | |
| TATACAAACCAACATACAAC+TGG | - | chr2_2:17020503-17020522 | None:intergenic | 30.0% | |
| !!! | AGTAGGTCTTTGTTTTAATG+TGG | - | chr2_2:17020631-17020650 | None:intergenic | 30.0% |
| ACATTAAAACAAAGACCTAC+TGG | + | chr2_2:17020630-17020649 | Msa0241460:CDS | 30.0% | |
| TTCATGCTATGGAAACAAAA+GGG | - | chr2_2:17020675-17020694 | None:intergenic | 30.0% | |
| TTTCATGCTATGGAAACAAA+AGG | - | chr2_2:17020676-17020695 | None:intergenic | 30.0% | |
| CAACTTATGATTTCATGCTA+TGG | - | chr2_2:17020686-17020705 | None:intergenic | 30.0% | |
| GTGTCTCACTATATAAAAAG+TGG | + | chr2_2:17020788-17020807 | Msa0241460:intron | 30.0% | |
| TGCTTTGATTAACAGCTTAT+TGG | + | chr2_2:17020930-17020949 | Msa0241460:intron | 30.0% | |
| ! | AAGTTTACCGTAATGCTTTT+TGG | + | chr2_2:17020969-17020988 | Msa0241460:intron | 30.0% |
| !! | TTGGTTAAATGTTGCTTTAG+GGG | + | chr2_2:17020988-17021007 | Msa0241460:intron | 30.0% |
| ACCATACATTATCTTCTACA+TGG | + | chr2_2:17021015-17021034 | Msa0241460:CDS | 30.0% | |
| AATAATATAGCTGTTGCAGT+AGG | - | chr2_2:17021087-17021106 | None:intergenic | 30.0% | |
| AACAGCTATATTATTGTTCC+CGG | + | chr2_2:17021092-17021111 | Msa0241460:CDS | 30.0% | |
| TATGGCAAAAAATAGATACC+GGG | - | chr2_2:17021113-17021132 | None:intergenic | 30.0% | |
| ! | CATGAATTCTTCTTGGTAAT+AGG | + | chr2_2:17021198-17021217 | Msa0241460:intron | 30.0% |
| ! | TCTTCTTGGTAATAGGAATT+TGG | + | chr2_2:17021205-17021224 | Msa0241460:intron | 30.0% |
| !!! | TTAGTTTTTTTCCCCTCAAA+AGG | + | chr2_2:17021243-17021262 | Msa0241460:intron | 30.0% |
| !!! | TAGTTTTTTTCCCCTCAAAA+GGG | + | chr2_2:17021244-17021263 | Msa0241460:intron | 30.0% |
| ! | ACTTGAATTTTCCCTTTTGA+GGG | - | chr2_2:17021258-17021277 | None:intergenic | 30.0% |
| !!! | AAGTACAGCTTTTAAAACCT+AGG | + | chr2_2:17021303-17021322 | Msa0241460:intron | 30.0% |
| AACAGAGTGAAGTATAAGAA+TGG | + | chr2_2:17021682-17021701 | Msa0241460:intron | 30.0% | |
| AAAACACCAACATTACTTCA+TGG | - | chr2_2:17022029-17022048 | None:intergenic | 30.0% | |
| ACAATTTCAGTAGAAATCGA+AGG | + | chr2_2:17022358-17022377 | Msa0241460:intron | 30.0% | |
| AAAATAACAATTGTGCCAAC+TGG | - | chr2_2:17022411-17022430 | None:intergenic | 30.0% | |
| GTTTACAAGACGGAAATAAT+TGG | - | chr2_2:17022573-17022592 | None:intergenic | 30.0% | |
| !!! | TCACTTTGGGATAAAGTTTT+TGG | + | chr2_2:17022687-17022706 | Msa0241460:CDS | 30.0% |
| CTTTACAATGTGTTCACAAT+TGG | - | chr2_2:17022906-17022925 | None:intergenic | 30.0% | |
| AGAATATGTTACAAGGTTTG+TGG | + | chr2_2:17022927-17022946 | Msa0241460:three_prime_UTR | 30.0% | |
| GAAGTAAAATCACAGCAAAA+AGG | - | chr2_2:17022967-17022986 | None:intergenic | 30.0% | |
| TGATGAGGCAATGATTTAGT+GGG | - | chr2_2:17018327-17018346 | None:intergenic | 35.0% | |
| AACGTAGAAAAAGGGATTTG+GGG | - | chr2_2:17018371-17018390 | None:intergenic | 35.0% | |
| GAACGTAGAAAAAGGGATTT+GGG | - | chr2_2:17018372-17018391 | None:intergenic | 35.0% | |
| TGAACGTAGAAAAAGGGATT+TGG | - | chr2_2:17018373-17018392 | None:intergenic | 35.0% | |
| TGAGAGTGAACGTAGAAAAA+GGG | - | chr2_2:17018379-17018398 | None:intergenic | 35.0% | |
| ! | TTTTTCTACGTTCACTCTCA+CGG | + | chr2_2:17018379-17018398 | Msa0241460:five_prime_UTR | 35.0% |
| TAAGAAGAAAACAATGCAGG+TGG | - | chr2_2:17018478-17018497 | None:intergenic | 35.0% | |
| CAGTAAGAAGAAAACAATGC+AGG | - | chr2_2:17018481-17018500 | None:intergenic | 35.0% | |
| ! | TGATGACGAGTGAAAAAGTT+TGG | + | chr2_2:17018920-17018939 | Msa0241460:intron | 35.0% |
| !!! | AAAACGACTATGGCCTTTTT+TGG | + | chr2_2:17018963-17018982 | Msa0241460:intron | 35.0% |
| !! | CTGTAAGGGTGTTTATTAGA+TGG | + | chr2_2:17018989-17019008 | Msa0241460:intron | 35.0% |
| ! | TTAATTTGGGACCTAAGCTT+TGG | + | chr2_2:17019025-17019044 | Msa0241460:intron | 35.0% |
| ATTGCTTAATGCCAAAGCTT+AGG | - | chr2_2:17019039-17019058 | None:intergenic | 35.0% | |
| !! | CTGACTTTTTCCTACAAGAA+AGG | + | chr2_2:17019338-17019357 | Msa0241460:intron | 35.0% |
| TCAATGTCAACCTTTCTTGT+AGG | - | chr2_2:17019351-17019370 | None:intergenic | 35.0% | |
| TGACATTGATGTCATTCGAA+AGG | + | chr2_2:17019362-17019381 | Msa0241460:intron | 35.0% | |
| AAGGCATGTGAAAACAATGT+TGG | + | chr2_2:17019381-17019400 | Msa0241460:intron | 35.0% | |
| CAAATCAACTACAAAGTCCT+GGG | - | chr2_2:17019551-17019570 | None:intergenic | 35.0% | |
| TCAAATCAACTACAAAGTCC+TGG | - | chr2_2:17019552-17019571 | None:intergenic | 35.0% | |
| !! | TTTAGGTTGTGACAACAAGT+AGG | + | chr2_2:17019688-17019707 | Msa0241460:intron | 35.0% |
| !! | ACCTCATTTTGAAAGAAACG+GGG | - | chr2_2:17019838-17019857 | None:intergenic | 35.0% |
| ! | CTTTCAAAATGAGGTTCTAG+AGG | + | chr2_2:17019843-17019862 | Msa0241460:CDS | 35.0% |
| CCTGATAAAAAGTAGACATG+TGG | - | chr2_2:17020088-17020107 | None:intergenic | 35.0% | |
| !!! | CCACATGTCTACTTTTTATC+AGG | + | chr2_2:17020085-17020104 | Msa0241460:intron | 35.0% |
| TCACATGATGAAACTTCACT+GGG | + | chr2_2:17020128-17020147 | Msa0241460:intron | 35.0% | |
| GCTGTTAATCAAAGCAGATA+TGG | - | chr2_2:17020926-17020945 | None:intergenic | 35.0% | |
| GCCATGTAGAAGATAATGTA+TGG | - | chr2_2:17021019-17021038 | None:intergenic | 35.0% | |
| ! | CTTGAATTTTCCCTTTTGAG+GGG | - | chr2_2:17021257-17021276 | None:intergenic | 35.0% |
| ! | GACTTGAATTTTCCCTTTTG+AGG | - | chr2_2:17021259-17021278 | None:intergenic | 35.0% |
| GGAAAATTCAAGTCTCACAT+TGG | + | chr2_2:17021265-17021284 | Msa0241460:intron | 35.0% | |
| !! | CCTTACAAAACGGACTAAAA+AGG | - | chr2_2:17021338-17021357 | None:intergenic | 35.0% |
| !! | CCTTTTTAGTCCGTTTTGTA+AGG | + | chr2_2:17021335-17021354 | Msa0241460:intron | 35.0% |
| TCTAACTCAGCCTTACAAAA+CGG | - | chr2_2:17021348-17021367 | None:intergenic | 35.0% | |
| AAAATTGAACCTGATTGGTG+AGG | - | chr2_2:17021455-17021474 | None:intergenic | 35.0% | |
| TTCGATGTGAAACTCCTTAA+AGG | - | chr2_2:17021509-17021528 | None:intergenic | 35.0% | |
| ! | TAGATGGATTCTTTGTAACG+TGG | + | chr2_2:17021569-17021588 | Msa0241460:intron | 35.0% |
| ATTTGGAAGGAAAATCACCA+TGG | + | chr2_2:17021619-17021638 | Msa0241460:intron | 35.0% | |
| TTTGGAAGGAAAATCACCAT+GGG | + | chr2_2:17021620-17021639 | Msa0241460:intron | 35.0% | |
| AGAGTGAAGTATAAGAATGG+TGG | + | chr2_2:17021685-17021704 | Msa0241460:intron | 35.0% | |
| TCTTAAGCTCCTATCAAAGA+AGG | - | chr2_2:17021800-17021819 | None:intergenic | 35.0% | |
| GTGTTGTAGTAGTACAAAAC+TGG | - | chr2_2:17021876-17021895 | None:intergenic | 35.0% | |
| !! | TGTTGGTGTTTTGTATTTCG+CGG | + | chr2_2:17022037-17022056 | Msa0241460:intron | 35.0% |
| ATAAAGCAGGAGTAGTTGAA+GGG | - | chr2_2:17022099-17022118 | None:intergenic | 35.0% | |
| AATAAAGCAGGAGTAGTTGA+AGG | - | chr2_2:17022100-17022119 | None:intergenic | 35.0% | |
| ! | TCAACTACTCCTGCTTTATT+TGG | + | chr2_2:17022100-17022119 | Msa0241460:CDS | 35.0% |
| ACCATGGTGCAAGTAATAAT+GGG | - | chr2_2:17022161-17022180 | None:intergenic | 35.0% | |
| AAATTGCCATCCACAGTTAA+AGG | - | chr2_2:17022237-17022256 | None:intergenic | 35.0% | |
| CAAAATATTGGAGCAACGAA+TGG | - | chr2_2:17022265-17022284 | None:intergenic | 35.0% | |
| CTGGTTACATACACATATCT+AGG | - | chr2_2:17022392-17022411 | None:intergenic | 35.0% | |
| GATATGTGTATGTAACCAGT+TGG | + | chr2_2:17022393-17022412 | Msa0241460:intron | 35.0% | |
| AGACAAAGTTAAAAGAAGGC+AGG | - | chr2_2:17022435-17022454 | None:intergenic | 35.0% | |
| TAATGGCCAGACTTATTTGA+AGG | + | chr2_2:17022474-17022493 | Msa0241460:intron | 35.0% | |
| AATGGCCAGACTTATTTGAA+GGG | + | chr2_2:17022475-17022494 | Msa0241460:intron | 35.0% | |
| AAAATTAACAACCCTTAGCG+AGG | - | chr2_2:17022502-17022521 | None:intergenic | 35.0% | |
| ! | ATTGGTTGGTATTCTCCAAA+AGG | - | chr2_2:17022555-17022574 | None:intergenic | 35.0% |
| ACAAGACGGAAATAATTGGT+TGG | - | chr2_2:17022569-17022588 | None:intergenic | 35.0% | |
| GGCTTGTATAGTTTACAAGA+CGG | - | chr2_2:17022583-17022602 | None:intergenic | 35.0% | |
| AAAACCAGGGAAAGATGATT+AGG | - | chr2_2:17022604-17022623 | None:intergenic | 35.0% | |
| TATCTTGGATCCTAAAGTGA+TGG | - | chr2_2:17022647-17022666 | None:intergenic | 35.0% | |
| !! | CACTTTAGGATCCAAGATAA+AGG | + | chr2_2:17022648-17022667 | Msa0241460:CDS | 35.0% |
| AGGATCCAAGATAAAGGATT+TGG | + | chr2_2:17022654-17022673 | Msa0241460:CDS | 35.0% | |
| GGATCCAAGATAAAGGATTT+GGG | + | chr2_2:17022655-17022674 | Msa0241460:CDS | 35.0% | |
| TGATCCCAAATCCTTTATCT+TGG | - | chr2_2:17022662-17022681 | None:intergenic | 35.0% | |
| ATATGTTACAAGGTTTGTGG+TGG | + | chr2_2:17022930-17022949 | Msa0241460:three_prime_UTR | 35.0% | |
| GATGAGGCAATGATTTAGTG+GGG | - | chr2_2:17018326-17018345 | None:intergenic | 40.0% | |
| GTGATGAGGCAATGATTTAG+TGG | - | chr2_2:17018328-17018347 | None:intergenic | 40.0% | |
| GTGAGAGTGAACGTAGAAAA+AGG | - | chr2_2:17018380-17018399 | None:intergenic | 40.0% | |
| AATGCAGGTGGAATCGAAAT+CGG | - | chr2_2:17018466-17018485 | None:intergenic | 40.0% | |
| ! | GTTCTATAGGTTGGACATCT+TGG | + | chr2_2:17019763-17019782 | Msa0241460:intron | 40.0% |
| TTGGTGAAGCTTATGAAGAG+TGG | + | chr2_2:17019782-17019801 | Msa0241460:CDS | 40.0% | |
| TGGTGAAGCTTATGAAGAGT+GGG | + | chr2_2:17019783-17019802 | Msa0241460:CDS | 40.0% | |
| TCCCCGTTTCTTTCAAAATG+AGG | + | chr2_2:17019834-17019853 | Msa0241460:CDS | 40.0% | |
| GATACAAGACTTAGCTGTTG+TGG | - | chr2_2:17019886-17019905 | None:intergenic | 40.0% | |
| ! | CAGCTAAGTCTTGTATCACT+TGG | + | chr2_2:17019889-17019908 | Msa0241460:intron | 40.0% |
| GGCAGACCAGTTAATGATAT+TGG | + | chr2_2:17019948-17019967 | Msa0241460:intron | 40.0% | |
| CTCACATGATGAAACTTCAC+TGG | + | chr2_2:17020127-17020146 | Msa0241460:intron | 40.0% | |
| ACAACTGGAAGCCAAATAAC+TGG | - | chr2_2:17020488-17020507 | None:intergenic | 40.0% | |
| ! | TTTGGCTTCCAGTTGTATGT+TGG | + | chr2_2:17020492-17020511 | Msa0241460:CDS | 40.0% |
| ! | TGGTTCTTGGCATTTTTGTG+TGG | + | chr2_2:17020570-17020589 | Msa0241460:CDS | 40.0% |
| ACAAGTCTCAAACCATCCAT+GGG | - | chr2_2:17021057-17021076 | None:intergenic | 40.0% | |
| AACAAGTCTCAAACCATCCA+TGG | - | chr2_2:17021058-17021077 | None:intergenic | 40.0% | |
| ATATAGCTGTTGCAGTAGGA+GGG | - | chr2_2:17021083-17021102 | None:intergenic | 40.0% | |
| AATATAGCTGTTGCAGTAGG+AGG | - | chr2_2:17021084-17021103 | None:intergenic | 40.0% | |
| !! | AAAACGGACTAAAAAGGCGA+GGG | - | chr2_2:17021332-17021351 | None:intergenic | 40.0% |
| AGATAGGACAGTCTTTGCTT+TGG | - | chr2_2:17021372-17021391 | None:intergenic | 40.0% | |
| AAAGAATGACTGACATCCAC+AGG | - | chr2_2:17021405-17021424 | None:intergenic | 40.0% | |
| !!! | CAACATTGGCTTTTTGAAGC+CGG | + | chr2_2:17021645-17021664 | Msa0241460:intron | 40.0% |
| TAAAGCAGGAGTAGTTGAAG+GGG | - | chr2_2:17022098-17022117 | None:intergenic | 40.0% | |
| !! | ACTACTCCTGCTTTATTTGG+CGG | + | chr2_2:17022103-17022122 | Msa0241460:CDS | 40.0% |
| ACCCATTATTACTTGCACCA+TGG | + | chr2_2:17022157-17022176 | Msa0241460:CDS | 40.0% | |
| GACCATGGTGCAAGTAATAA+TGG | - | chr2_2:17022162-17022181 | None:intergenic | 40.0% | |
| !! | TGCTTTTACCTTCAGGTTTC+GGG | - | chr2_2:17022203-17022222 | None:intergenic | 40.0% |
| !! | GTGCTTTTACCTTCAGGTTT+CGG | - | chr2_2:17022204-17022223 | None:intergenic | 40.0% |
| ATCCACAGTTAAAGGAGGAA+GGG | - | chr2_2:17022229-17022248 | None:intergenic | 40.0% | |
| ATGGCCAGACTTATTTGAAG+GGG | + | chr2_2:17022476-17022495 | Msa0241460:intron | 40.0% | |
| ACCACTTGAACCATCACTTT+AGG | + | chr2_2:17022634-17022653 | Msa0241460:CDS | 40.0% | |
| TCCTAAAGTGATGGTTCAAG+TGG | - | chr2_2:17022638-17022657 | None:intergenic | 40.0% | |
| TTGGGATCACTTCATCACTT+TGG | + | chr2_2:17022673-17022692 | Msa0241460:CDS | 40.0% | |
| TGGGATCACTTCATCACTTT+GGG | + | chr2_2:17022674-17022693 | Msa0241460:CDS | 40.0% | |
| AACACTTCCTTCCTCAAAAG+CGG | + | chr2_2:17022710-17022729 | Msa0241460:CDS | 40.0% | |
| CTGTTAGGGATAGCATATGT+TGG | + | chr2_2:17022755-17022774 | Msa0241460:three_prime_UTR | 40.0% | |
| TAGGGATAGCATATGTTGGT+TGG | + | chr2_2:17022759-17022778 | Msa0241460:three_prime_UTR | 40.0% | |
| TGCTCCACAATTGATGTTTG+CGG | + | chr2_2:17022836-17022855 | Msa0241460:three_prime_UTR | 40.0% | |
| GGGGTATAAGAGAGATGATC+TGG | - | chr2_2:17018307-17018326 | None:intergenic | 45.0% | |
| !!! | ACGACTATGGCCTTTTTTGG+TGG | + | chr2_2:17018966-17018985 | Msa0241460:intron | 45.0% |
| !!! | GCCTTTTTTGGTGGCTGTAA+GGG | + | chr2_2:17018975-17018994 | Msa0241460:intron | 45.0% |
| ACCCTTACAGCCACCAAAAA+AGG | - | chr2_2:17018979-17018998 | None:intergenic | 45.0% | |
| ATGTAGAGAAGTGGGATGTC+CGG | + | chr2_2:17019145-17019164 | Msa0241460:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | - | chr2_2:17019207-17019226 | None:intergenic | 45.0% |
| !!! | GAATAAGCCCCTTGTTTTCC+AGG | + | chr2_2:17019570-17019589 | Msa0241460:CDS | 45.0% |
| AGCCTGTACCTGGAAAACAA+GGG | - | chr2_2:17019581-17019600 | None:intergenic | 45.0% | |
| AAGCCTGTACCTGGAAAACA+AGG | - | chr2_2:17019582-17019601 | None:intergenic | 45.0% | |
| TCATCAGCCCATTGTTAGCA+AGG | + | chr2_2:17019807-17019826 | Msa0241460:CDS | 45.0% | |
| GGACCTTCCTTGCTAACAAT+GGG | - | chr2_2:17019817-17019836 | None:intergenic | 45.0% | |
| GGTGGGCAATACCAGTTATT+TGG | + | chr2_2:17020474-17020493 | Msa0241460:CDS | 45.0% | |
| !! | CTGTCCTCATATAGCTCTGA+TGG | + | chr2_2:17020547-17020566 | Msa0241460:CDS | 45.0% |
| !! | TCCTCATATAGCTCTGATGG+TGG | + | chr2_2:17020550-17020569 | Msa0241460:CDS | 45.0% |
| ACCACCATCAGAGCTATATG+AGG | - | chr2_2:17020554-17020573 | None:intergenic | 45.0% | |
| !! | ATAGCTCTGATGGTGGTTCT+TGG | + | chr2_2:17020557-17020576 | Msa0241460:CDS | 45.0% |
| CAGAGAGAGATCTAACCAGT+AGG | - | chr2_2:17020648-17020667 | None:intergenic | 45.0% | |
| !! | ATGCCGGTTTCGCTAAAAAC+AGG | + | chr2_2:17020763-17020782 | Msa0241460:intron | 45.0% |
| !! | TGCCGGTTTCGCTAAAAACA+GGG | + | chr2_2:17020764-17020783 | Msa0241460:intron | 45.0% |
| !!! | CACCCTGTTTTTAGCGAAAC+CGG | - | chr2_2:17020769-17020788 | None:intergenic | 45.0% |
| GTGGGACTTGCATGATTTAG+TGG | + | chr2_2:17020807-17020826 | Msa0241460:intron | 45.0% | |
| CAAGTCTCAAACCATCCATG+GGG | - | chr2_2:17021056-17021075 | None:intergenic | 45.0% | |
| !! | CAAAACGGACTAAAAAGGCG+AGG | - | chr2_2:17021333-17021352 | None:intergenic | 45.0% |
| ! | GGTTTTTCACCTCACCAATC+AGG | + | chr2_2:17021443-17021462 | Msa0241460:intron | 45.0% |
| AATCACCATGGGCACAACAT+TGG | + | chr2_2:17021631-17021650 | Msa0241460:intron | 45.0% | |
| AAAAGCCAATGTTGTGCCCA+TGG | - | chr2_2:17021639-17021658 | None:intergenic | 45.0% | |
| TTTATTTGGCGGTGGCTTAC+TGG | + | chr2_2:17022114-17022133 | Msa0241460:CDS | 45.0% | |
| TTATTTGGCGGTGGCTTACT+GGG | + | chr2_2:17022115-17022134 | Msa0241460:CDS | 45.0% | |
| TTTCGGGGATGTTCAGTCTT+TGG | - | chr2_2:17022187-17022206 | None:intergenic | 45.0% | |
| !! | GCTTTTACCTTCAGGTTTCG+GGG | - | chr2_2:17022202-17022221 | None:intergenic | 45.0% |
| !!! | AGGGAAGTGCTTTTACCTTC+AGG | - | chr2_2:17022210-17022229 | None:intergenic | 45.0% |
| TTCCCTTCCTCCTTTAACTG+TGG | + | chr2_2:17022224-17022243 | Msa0241460:intron | 45.0% | |
| CATCCACAGTTAAAGGAGGA+AGG | - | chr2_2:17022230-17022249 | None:intergenic | 45.0% | |
| CTTCCTCCTTTAACTGTGGA+TGG | + | chr2_2:17022228-17022247 | Msa0241460:intron | 45.0% | |
| TTGCCATCCACAGTTAAAGG+AGG | - | chr2_2:17022234-17022253 | None:intergenic | 45.0% | |
| CAAGCCTAATCATCTTTCCC+TGG | + | chr2_2:17022597-17022616 | Msa0241460:intron | 45.0% | |
| GGTACATCTGCAGAAAACCA+GGG | - | chr2_2:17022617-17022636 | None:intergenic | 45.0% | |
| TGGTACATCTGCAGAAAACC+AGG | - | chr2_2:17022618-17022637 | None:intergenic | 45.0% | |
| !! | TTAGCATCCGCTTTTGAGGA+AGG | - | chr2_2:17022720-17022739 | None:intergenic | 45.0% |
| !! | GCTTTTAGCATCCGCTTTTG+AGG | - | chr2_2:17022724-17022743 | None:intergenic | 45.0% |
| GCTCCACAATTGATGTTTGC+GGG | + | chr2_2:17022837-17022856 | Msa0241460:three_prime_UTR | 45.0% | |
| CTCCACAATTGATGTTTGCG+GGG | + | chr2_2:17022838-17022857 | Msa0241460:three_prime_UTR | 45.0% | |
| AACCCCGCAAACATCAATTG+TGG | - | chr2_2:17022843-17022862 | None:intergenic | 45.0% | |
| !!! | TTGAATTATTAATATTTTTT+AGG | + | chr2_2:17018784-17018803 | Msa0241460:intron | 5.0% |
| !!! | TAAAAAAACAATTATTATTT+TGG | - | chr2_2:17022991-17023010 | None:intergenic | 5.0% |
| GAATCTAGCCGTTGACAGAC+TGG | - | chr2_2:17018249-17018268 | None:intergenic | 50.0% | |
| GCGTGTTGTGTTGAGTGATG+AGG | - | chr2_2:17018342-17018361 | None:intergenic | 50.0% | |
| !!! | GGCCTTTTTTGGTGGCTGTA+AGG | + | chr2_2:17018974-17018993 | Msa0241460:intron | 50.0% |
| TGGTCAAGTAGTCGAGTGAC+TGG | + | chr2_2:17019106-17019125 | Msa0241460:intron | 50.0% | |
| TGTAGAGAAGTGGGATGTCC+GGG | + | chr2_2:17019146-17019165 | Msa0241460:intron | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+AGG | + | chr2_2:17019208-17019227 | Msa0241460:intron | 50.0% | |
| CCAACTGAGCTAAGCTCACA+GGG | + | chr2_2:17019209-17019228 | Msa0241460:intron | 50.0% | |
| TTTGGCGTTCAGCACCAAGA+TGG | + | chr2_2:17019522-17019541 | Msa0241460:intron | 50.0% | |
| AAAGTCCTGGGCAACCATCT+TGG | - | chr2_2:17019539-17019558 | None:intergenic | 50.0% | |
| GCCTGTACCTGGAAAACAAG+GGG | - | chr2_2:17019580-17019599 | None:intergenic | 50.0% | |
| ! | TTACGGGTTAAGCCTGTACC+TGG | - | chr2_2:17019591-17019610 | None:intergenic | 50.0% |
| CAGCCCATTGTTAGCAAGGA+AGG | + | chr2_2:17019811-17019830 | Msa0241460:CDS | 50.0% | |
| GGGACCTTCCTTGCTAACAA+TGG | - | chr2_2:17019818-17019837 | None:intergenic | 50.0% | |
| !! | TGTATCACTTGGTGTACGCG+TGG | + | chr2_2:17019900-17019919 | Msa0241460:intron | 50.0% |
| !! | GTATCACTTGGTGTACGCGT+GGG | + | chr2_2:17019901-17019920 | Msa0241460:intron | 50.0% |
| !! | TATCACTTGGTGTACGCGTG+GGG | + | chr2_2:17019902-17019921 | Msa0241460:intron | 50.0% |
| TATTGCCCACCAGACAGTGA+GGG | - | chr2_2:17020465-17020484 | None:intergenic | 50.0% | |
| GAGCTATATGAGGACAGCTG+AGG | - | chr2_2:17020544-17020563 | None:intergenic | 50.0% | |
| ! | AACCATCCATGGGGTGTTTG+TGG | - | chr2_2:17021047-17021066 | None:intergenic | 50.0% |
| TAAAAAGGCGAGGGTTGCCT+AGG | - | chr2_2:17021323-17021342 | None:intergenic | 50.0% | |
| TATTTCGCGGACTCCAGTTC+TGG | + | chr2_2:17022050-17022069 | Msa0241460:intron | 50.0% | |
| !! | ACTCCTGCTTTATTTGGCGG+TGG | + | chr2_2:17022106-17022125 | Msa0241460:CDS | 50.0% |
| AAGCCACCGCCAAATAAAGC+AGG | - | chr2_2:17022112-17022131 | None:intergenic | 50.0% | |
| GTTCAGTCTTTGGCTGACCA+TGG | - | chr2_2:17022177-17022196 | None:intergenic | 50.0% | |
| TGAACATCCCCGAAACCTGA+AGG | + | chr2_2:17022192-17022211 | Msa0241460:CDS | 50.0% | |
| GAGGCCCCTTCAAATAAGTC+TGG | - | chr2_2:17022483-17022502 | None:intergenic | 50.0% | |
| TATTTGAAGGGGCCTCGCTA+AGG | + | chr2_2:17022487-17022506 | Msa0241460:intron | 50.0% | |
| ATTTGAAGGGGCCTCGCTAA+GGG | + | chr2_2:17022488-17022507 | Msa0241460:intron | 50.0% | |
| ! | TTGACAGACTGGCTGCATGG+GGG | - | chr2_2:17018238-17018257 | None:intergenic | 55.0% |
| ! | GTTGACAGACTGGCTGCATG+GGG | - | chr2_2:17018239-17018258 | None:intergenic | 55.0% |
| ! | CGTTGACAGACTGGCTGCAT+GGG | - | chr2_2:17018240-17018259 | None:intergenic | 55.0% |
| CCATGCAGCCAGTCTGTCAA+CGG | + | chr2_2:17018238-17018257 | Msa0241460:five_prime_UTR | 55.0% | |
| GTAGAGAAGTGGGATGTCCG+GGG | + | chr2_2:17019147-17019166 | Msa0241460:intron | 55.0% | |
| CCCTGTGAGCTTAGCTCAGT+TGG | - | chr2_2:17019212-17019231 | None:intergenic | 55.0% | |
| !!! | GCCCCTTGTTTTCCAGGTAC+AGG | + | chr2_2:17019576-17019595 | Msa0241460:intron | 55.0% |
| !! | ATCACTTGGTGTACGCGTGG+GGG | + | chr2_2:17019903-17019922 | Msa0241460:intron | 55.0% |
| GGAGATTGCTAGGCTAGGCT+AGG | + | chr2_2:17019927-17019946 | Msa0241460:intron | 55.0% | |
| AGTCCTTGACCCTCACTGTC+TGG | + | chr2_2:17020453-17020472 | Msa0241460:intron | 55.0% | |
| CTTGACCCTCACTGTCTGGT+GGG | + | chr2_2:17020457-17020476 | Msa0241460:CDS | 55.0% | |
| GTATTGCCCACCAGACAGTG+AGG | - | chr2_2:17020466-17020485 | None:intergenic | 55.0% | |
| ! | CATCCATGGGGTGTTTGTGG+TGG | - | chr2_2:17021044-17021063 | None:intergenic | 55.0% |
| CACCACAAACACCCCATGGA+TGG | + | chr2_2:17021042-17021061 | Msa0241460:CDS | 55.0% | |
| GCTTCACCACGTTCCAGAAC+TGG | - | chr2_2:17022066-17022085 | None:intergenic | 55.0% | |
| AGCAGGAGTAGTTGAAGGGG+TGG | - | chr2_2:17022095-17022114 | None:intergenic | 55.0% | |
| ! | CCGTTGACAGACTGGCTGCA+TGG | - | chr2_2:17018241-17018260 | None:intergenic | 60.0% |
| GGCGCAGTTCTCATCGCTCA+CGG | + | chr2_2:17018400-17018419 | Msa0241460:five_prime_UTR | 60.0% | |
| GTGTTTCTCGCTGCCGTGCA+CGG | + | chr2_2:17018422-17018441 | Msa0241460:five_prime_UTR | 60.0% | |
| !! | GATCGAAGAAGCGCCGTGCA+CGG | - | chr2_2:17018438-17018457 | None:intergenic | 60.0% |
| CAGCACCAAGATGGTTGCCC+AGG | + | chr2_2:17019531-17019550 | Msa0241460:intron | 60.0% | |
| GGGGTGGAGATTGCTAGGCT+AGG | + | chr2_2:17019922-17019941 | Msa0241460:intron | 60.0% | |
| CCACCAGACAGTGAGGGTCA+AGG | - | chr2_2:17020459-17020478 | None:intergenic | 60.0% | |
| CCTTGACCCTCACTGTCTGG+TGG | + | chr2_2:17020456-17020475 | Msa0241460:CDS | 60.0% | |
| CTGCCACCACAAACACCCCA+TGG | + | chr2_2:17021038-17021057 | Msa0241460:CDS | 60.0% | |
| !! | CGGACTCCAGTTCTGGAACG+TGG | + | chr2_2:17022057-17022076 | Msa0241460:intron | 60.0% |
| CAGGGCTGGGGTTTCAACCC+CGG | - | chr2_2:17019167-17019186 | None:intergenic | 65.0% | |
| !! | ACTTGGTGTACGCGTGGGGG+TGG | + | chr2_2:17019906-17019925 | Msa0241460:intron | 65.0% |
| GCGTGGGGGTGGAGATTGCT+AGG | + | chr2_2:17019917-17019936 | Msa0241460:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 17018222 | 17023019 | 17018222 | ID=Msa0241460;Name=Msa0241460 |
| chr2_2 | mRNA | 17018222 | 17023019 | 17018222 | ID=Msa0241460-mRNA-1;Parent=Msa0241460;Name=Msa0241460-mRNA-1;_AED=0.15;_eAED=0.15;_QI=290|1|1|1|0.83|0.71|7|270|237 |
| chr2_2 | exon | 17018222 | 17018504 | 17018222 | ID=Msa0241460-mRNA-1:exon:7042;Parent=Msa0241460-mRNA-1 |
| chr2_2 | exon | 17019534 | 17019591 | 17019534 | ID=Msa0241460-mRNA-1:exon:7043;Parent=Msa0241460-mRNA-1 |
| chr2_2 | exon | 17019772 | 17019864 | 17019772 | ID=Msa0241460-mRNA-1:exon:7044;Parent=Msa0241460-mRNA-1 |
| chr2_2 | exon | 17020455 | 17020651 | 17020455 | ID=Msa0241460-mRNA-1:exon:7045;Parent=Msa0241460-mRNA-1 |
| chr2_2 | exon | 17021008 | 17021113 | 17021008 | ID=Msa0241460-mRNA-1:exon:7046;Parent=Msa0241460-mRNA-1 |
| chr2_2 | exon | 17022067 | 17022213 | 17022067 | ID=Msa0241460-mRNA-1:exon:7047;Parent=Msa0241460-mRNA-1 |
| chr2_2 | exon | 17022630 | 17023019 | 17022630 | ID=Msa0241460-mRNA-1:exon:7048;Parent=Msa0241460-mRNA-1 |
| chr2_2 | five_prime_UTR | 17018222 | 17018504 | 17018222 | ID=Msa0241460-mRNA-1:five_prime_utr;Parent=Msa0241460-mRNA-1 |
| chr2_2 | five_prime_UTR | 17019534 | 17019540 | 17019534 | ID=Msa0241460-mRNA-1:five_prime_utr;Parent=Msa0241460-mRNA-1 |
| chr2_2 | CDS | 17019541 | 17019591 | 17019541 | ID=Msa0241460-mRNA-1:cds;Parent=Msa0241460-mRNA-1 |
| chr2_2 | CDS | 17019772 | 17019864 | 17019772 | ID=Msa0241460-mRNA-1:cds;Parent=Msa0241460-mRNA-1 |
| chr2_2 | CDS | 17020455 | 17020651 | 17020455 | ID=Msa0241460-mRNA-1:cds;Parent=Msa0241460-mRNA-1 |
| chr2_2 | CDS | 17021008 | 17021113 | 17021008 | ID=Msa0241460-mRNA-1:cds;Parent=Msa0241460-mRNA-1 |
| chr2_2 | CDS | 17022067 | 17022213 | 17022067 | ID=Msa0241460-mRNA-1:cds;Parent=Msa0241460-mRNA-1 |
| chr2_2 | CDS | 17022630 | 17022749 | 17022630 | ID=Msa0241460-mRNA-1:cds;Parent=Msa0241460-mRNA-1 |
| chr2_2 | three_prime_UTR | 17022750 | 17023019 | 17022750 | ID=Msa0241460-mRNA-1:three_prime_utr;Parent=Msa0241460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
