AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1257640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257640 MtrunA17_Chr4g0056321 98.286 350 6 0 1 350 1 350 0.0 702
Msa1257640 MtrunA17_Chr5g0399111 85.429 350 51 0 1 350 1 350 0.0 615
Msa1257640 MtrunA17_Chr4g0049321 24.316 329 209 13 39 350 46 351 2.17e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257640 AT4G17260.1 76.771 353 79 1 1 350 1 353 0.0 545
Msa1257640 AT2G22780.1 24.074 324 216 12 39 350 44 349 2.17e-12 67.8

Find 140 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGGCGCGTTCCATTATT+AGG 0.155648 8_2:+58265467 Msa1257640:CDS
TACATCGCATGGAAGCTTTC+TGG 0.223266 8_2:+58264266 Msa1257640:CDS
TCCGAATTCAGCCACCATTT+TGG 0.237708 8_2:-58265802 None:intergenic
GTCTAAAAGGTTACACTTCT+TGG 0.242478 8_2:+58265422 Msa1257640:CDS
TTTCCTTTGGTCCCTAATAA+TGG 0.266030 8_2:-58265479 None:intergenic
GAGGAATCTTTCTCTGTTCC+AGG 0.273770 8_2:+58264166 Msa1257640:CDS
AATTCACCCTGTGTCTGTTT+TGG 0.299725 8_2:+58265501 Msa1257640:CDS
TTTCTGGGTTTCCTTCTAAT+CGG 0.317162 8_2:+58264282 Msa1257640:CDS
TATGAAGTCATCAGTCTAAA+AGG 0.318657 8_2:+58265409 Msa1257640:CDS
TTAGTACTTGCTATCCAAAA+TGG 0.319322 8_2:+58265788 Msa1257640:three_prime_UTR
TGGGTTAAGTCAAGGCCGTC+TGG 0.326744 8_2:-58263816 None:intergenic
CTTGGCGCGTTCCATTATTA+GGG 0.327453 8_2:+58265468 Msa1257640:CDS
ATTTGGATTCATCTCGGTTT+CGG 0.328348 8_2:+58264324 Msa1257640:CDS
TCCAAAATGGTGGCTGAATT+CGG 0.330744 8_2:+58265801 Msa1257640:three_prime_UTR
AATGGCCATGCCGACGTTAC+CGG 0.352563 8_2:-58263916 None:intergenic
CCCACTGTTTCAGTGTTATT+CGG 0.357878 8_2:+58263594 Msa1257640:five_prime_UTR
GCCATTGGGTACTCGGTGGC+TGG 0.359042 8_2:+58265445 Msa1257640:CDS
TTTAAATACCCAACTGAGTC+TGG 0.359309 8_2:-58265675 None:intergenic
ACATCGCATGGAAGCTTTCT+GGG 0.367928 8_2:+58264267 Msa1257640:CDS
GATGATGATTTGTTAGTTGC+AGG 0.378537 8_2:-58263750 None:intergenic
GGATTCTGCTAAAACTATCT+TGG 0.379469 8_2:+58265648 Msa1257640:CDS
GAATTCGGATCTTTGTAGTA+TGG 0.380379 8_2:+58265816 Msa1257640:three_prime_UTR
TGGGTACTCGGTGGCTGGCT+TGG 0.388620 8_2:+58265450 Msa1257640:CDS
AAACCGAGATGAATCCAAAT+TGG 0.390309 8_2:-58264321 None:intergenic
TTCCTTCTAATCGGGTCATC+GGG 0.399644 8_2:+58264291 Msa1257640:CDS
GTTAGTGAGTCTGTTAGATA+TGG 0.405700 8_2:-58265703 None:intergenic
CCTCCTCTTCCAAGCTGTGC+TGG 0.408953 8_2:-58265571 None:intergenic
ATCTCGCCGCGGAGTTTGTC+GGG 0.409424 8_2:-58263996 None:intergenic
ATGAGGAGGAACAAAGGCTT+AGG 0.410444 8_2:+58265626 Msa1257640:CDS
GGTCAACGCTCAGGATGTTC+AGG 0.411810 8_2:+58264370 Msa1257640:CDS
AGATGGGTTTGAAGAAGGCT+TGG 0.412115 8_2:-58263836 None:intergenic
TTCTTGGGCCATTGGGTACT+CGG 0.413662 8_2:+58265438 Msa1257640:CDS
GATCTTGTTGTGACGCTTTG+TGG 0.420065 8_2:-58263880 None:intergenic
TCTAATCGGGTCATCGGGTC+GGG 0.422317 8_2:+58264296 Msa1257640:CDS
TTCTGGGTTTCCTTCTAATC+GGG 0.423028 8_2:+58264283 Msa1257640:CDS
ATGTAGGTAAGAACATCAAC+GGG 0.425256 8_2:-58264248 None:intergenic
TTTCCTTCTAATCGGGTCAT+CGG 0.428046 8_2:+58264290 Msa1257640:CDS
GGTTACACTTCTTGGGCCAT+TGG 0.429243 8_2:+58265430 Msa1257640:CDS
ACGATGATCAGAACCGTTTC+CGG 0.432903 8_2:-58264218 None:intergenic
TCTAAAAGGTTACACTTCTT+GGG 0.435111 8_2:+58265423 Msa1257640:CDS
CGTCGGTGAGGTCTTGAGTT+AGG 0.435609 8_2:-58263950 None:intergenic
GGCTCGTTACTCGCCGGAAA+CGG 0.437337 8_2:+58264205 Msa1257640:CDS
TTCTAATCGGGTCATCGGGT+CGG 0.439376 8_2:+58264295 Msa1257640:CDS
GTTACACTTCTTGGGCCATT+GGG 0.447787 8_2:+58265431 Msa1257640:CDS
ATCTTGTTGTGACGCTTTGT+GGG 0.453660 8_2:-58263879 None:intergenic
CATGCATAGTAGGGGAGCAC+GGG 0.454511 8_2:+58265254 Msa1257640:CDS
CATAGAACTTGAAATTTGAC+TGG 0.457878 8_2:-58265863 None:intergenic
TTGGTGCAGGCATGCATAGT+AGG 0.460381 8_2:+58265244 Msa1257640:intron
TGGTGGTGCTGCGTTTGAGA+TGG 0.467126 8_2:-58263853 None:intergenic
GATGGGTTTGAAGAAGGCTT+GGG 0.470612 8_2:-58263835 None:intergenic
TTGTGACGCTTTGTGGGTGA+TGG 0.472163 8_2:-58263873 None:intergenic
CTTGGAAGAGGAGGGGTGCT+TGG 0.474117 8_2:+58265580 Msa1257640:CDS
GAGATCGGAGCCAGCAGTAA+CGG 0.484502 8_2:-58264084 None:intergenic
GTTTGAGATGGGTTTGAAGA+AGG 0.490323 8_2:-58263841 None:intergenic
TGGTGCAGGCATGCATAGTA+GGG 0.501326 8_2:+58265245 Msa1257640:intron
GGTGGTGCTGCGTTTGAGAT+GGG 0.503846 8_2:-58263852 None:intergenic
ACCGATCTGCCTTGCACCGG+CGG 0.505308 8_2:-58264117 None:intergenic
TTGGAGGTCCAGACTCAGTT+GGG 0.507271 8_2:+58265667 Msa1257640:CDS
CCTCATTGCTGATCACCTCC+AGG 0.512139 8_2:+58264349 Msa1257640:CDS
GTTGAATACTCCGTTACTGC+TGG 0.512854 8_2:+58264074 Msa1257640:CDS
GCATGCATAGTAGGGGAGCA+CGG 0.515411 8_2:+58265253 Msa1257640:CDS
CTCATTATTCATGTGCACAT+TGG 0.516320 8_2:-58265608 None:intergenic
GTATTGTCACCGCCGGTGCA+AGG 0.516525 8_2:+58264108 Msa1257640:CDS
TCACCTCCAGGTCAACGCTC+AGG 0.517562 8_2:+58264361 Msa1257640:CDS
CCCTTTGGCTCGTTACTCGC+CGG 0.519160 8_2:+58264199 Msa1257640:CDS
AGCGGTTCTGCTTCGACGTT+AGG 0.520401 8_2:+58263792 Msa1257640:CDS
TGGTCTAGCATCAGCATTGG+TGG 0.521752 8_2:+58265295 Msa1257640:CDS
TGAGGAGGAACAAAGGCTTA+GGG 0.530899 8_2:+58265627 Msa1257640:CDS
TTGCCAGCACAGCTTGGAAG+AGG 0.536651 8_2:+58265568 Msa1257640:CDS
CTTGGAGGTCCAGACTCAGT+TGG 0.544227 8_2:+58265666 Msa1257640:CDS
CACAACAAGATCTCCGTCAT+CGG 0.544348 8_2:+58263891 Msa1257640:CDS
TTCTGCTAAAACTATCTTGG+AGG 0.545697 8_2:+58265651 Msa1257640:CDS
CCGGCGAGTAACGAGCCAAA+GGG 0.546843 8_2:-58264199 None:intergenic
AAGATCTCCGTCATCGGCGC+CGG 0.547198 8_2:+58263897 Msa1257640:CDS
ACCGCCGGTGCAAGGCAGAT+CGG 0.553456 8_2:+58264116 Msa1257640:CDS
ATGTTCTTACCTACATCGCA+TGG 0.553838 8_2:+58264255 Msa1257640:CDS
CCAGCACAGCTTGGAAGAGG+AGG 0.555853 8_2:+58265571 Msa1257640:CDS
CCCTTAGCCAAAACAGACAC+AGG 0.556926 8_2:-58265508 None:intergenic
GGCAGATCGGTGGTGAGTCT+AGG 0.557502 8_2:+58264129 Msa1257640:CDS
GGGTTAAGTCAAGGCCGTCT+GGG 0.559723 8_2:-58263815 None:intergenic
TGCATATGAGAAAGAAACGC+TGG 0.561783 8_2:+58265354 Msa1257640:CDS
CAGCACAGCTTGGAAGAGGA+GGG 0.569000 8_2:+58265572 Msa1257640:CDS
GGTAAGAACATCAACGGGGT+TGG 0.569302 8_2:-58264243 None:intergenic
TTGAGCTTGCCAGCACAGCT+TGG 0.573311 8_2:+58265562 Msa1257640:CDS
AGAAAGCTTCCATGCGATGT+AGG 0.573366 8_2:-58264264 None:intergenic
GTACCAATTTGGATTCATCT+CGG 0.575971 8_2:+58264318 Msa1257640:CDS
TCCGGCGAGTAACGAGCCAA+AGG 0.577653 8_2:-58264200 None:intergenic
GGTGAGGTCTTGAGTTAGGA+TGG 0.578230 8_2:-58263946 None:intergenic
TCTAACAGACTCACTAACTA+CGG 0.580437 8_2:+58265708 Msa1257640:three_prime_UTR
GACGTTACCGGCGCCGATGA+CGG 0.581018 8_2:-58263904 None:intergenic
AGTAACACACTGGACTGTGA+AGG 0.583599 8_2:-58263656 None:intergenic
AGTTAGGATGGTCTGAGCAA+TGG 0.584206 8_2:-58263934 None:intergenic
ACCGAATAACACTGAAACAG+TGG 0.584969 8_2:-58263595 None:intergenic
AGCACAGCTTGGAAGAGGAG+GGG 0.586218 8_2:+58265573 Msa1257640:CDS
CGGCGCCGGTAACGTCGGCA+TGG 0.586725 8_2:+58263911 Msa1257640:CDS
GGCGGTGACAATACAGAGAT+CGG 0.590044 8_2:-58264099 None:intergenic
TTGTGGTCTAGCATCAGCAT+TGG 0.596257 8_2:+58265292 Msa1257640:CDS
GTCATCGGCGCCGGTAACGT+CGG 0.596385 8_2:+58263906 Msa1257640:CDS
TGACGCTTTGTGGGTGATGG+TGG 0.598957 8_2:-58263870 None:intergenic
AGAAGGCTTGGGTTAAGTCA+AGG 0.599256 8_2:-58263824 None:intergenic
ACCACCGATCTGCCTTGCAC+CGG 0.601852 8_2:-58264120 None:intergenic
TGAATAATGAGGAGGAACAA+AGG 0.605881 8_2:+58265620 Msa1257640:CDS
GGGATAGTTCAGTGGCATTG+TGG 0.607315 8_2:+58265275 Msa1257640:CDS
CAATGTGCACATGAATAATG+AGG 0.607609 8_2:+58265609 Msa1257640:CDS
CTAGGCTTAATCTTCTTCAG+AGG 0.607829 8_2:+58264147 Msa1257640:CDS
TTGCGGTGGAAGACAACCAT+GGG 0.611610 8_2:-58265754 None:intergenic
GCCAGCCACCGAGTACCCAA+TGG 0.611646 8_2:-58265446 None:intergenic
ATACTGGTTTGGAAAACAGT+AGG 0.613609 8_2:-58263618 None:intergenic
GTAACACACTGGACTGTGAA+GGG 0.614122 8_2:-58263655 None:intergenic
CGGAGGAGTTGATCTTAACA+CGG 0.616884 8_2:-58264052 None:intergenic
CCGAATAACACTGAAACAGT+GGG 0.627931 8_2:-58263594 None:intergenic
GCTTCGACGTTAGGCCCAGA+CGG 0.630277 8_2:+58263801 Msa1257640:CDS
AGTTGATCTTAACACGGGGA+AGG 0.633694 8_2:-58264046 None:intergenic
GTTCCATTATTAGGGACCAA+AGG 0.633706 8_2:+58265476 Msa1257640:CDS
AGCAGTAACGGAGTATTCAA+CGG 0.634943 8_2:-58264072 None:intergenic
GATGTAGGTAAGAACATCAA+CGG 0.637519 8_2:-58264249 None:intergenic
GGAGGAGTTGATCTTAACAC+GGG 0.638442 8_2:-58264051 None:intergenic
GATCTCTGTATTGTCACCGC+CGG 0.642113 8_2:+58264101 Msa1257640:CDS
CGATGACGAGCTCGTCGGTG+AGG 0.651455 8_2:-58263962 None:intergenic
AACAAACCCGACAAACTCCG+CGG 0.654627 8_2:+58263990 Msa1257640:CDS
CTTGCGGTGGAAGACAACCA+TGG 0.657039 8_2:-58265755 None:intergenic
GGCGAGTAACGAGCCAAAGG+GGG 0.657545 8_2:-58264197 None:intergenic
CCTGGAGGTGATCAGCAATG+AGG 0.659064 8_2:-58264349 None:intergenic
ATGCATAGTAGGGGAGCACG+GGG 0.668532 8_2:+58265255 Msa1257640:CDS
TTGGGCCATTGGGTACTCGG+TGG 0.669464 8_2:+58265441 Msa1257640:CDS
CGGCGAGTAACGAGCCAAAG+GGG 0.669624 8_2:-58264198 None:intergenic
TCAATCATCATGCACAAGAG+CGG 0.672795 8_2:+58263774 Msa1257640:exon
GTACTTGCTATCCAAAATGG+TGG 0.674426 8_2:+58265791 Msa1257640:three_prime_UTR
CCTTAGCCAAAACAGACACA+GGG 0.678012 8_2:-58265507 None:intergenic
GTCGACGATGACGAGCTCGT+CGG 0.681636 8_2:-58263967 None:intergenic
TGTGCACATGAATAATGAGG+AGG 0.692647 8_2:+58265612 Msa1257640:CDS
GGAGCACGGGGATAGTTCAG+TGG 0.698387 8_2:+58265267 Msa1257640:CDS
CATCCTGAGCGTTGACCTGG+AGG 0.703641 8_2:-58264364 None:intergenic
TGTGTGTGAAAGTAACACAC+TGG 0.704615 8_2:-58263666 None:intergenic
GGTGCAGGCATGCATAGTAG+GGG 0.709667 8_2:+58265246 Msa1257640:intron
GAAGATCAAGCATCTCGCCG+CGG 0.743598 8_2:-58264007 None:intergenic
AGTAACGGAGTATTCAACGG+AGG 0.760315 8_2:-58264069 None:intergenic
ATATGAATAGCAAATGTGTG+TGG 0.762223 8_2:-58263726 None:intergenic
GAGGAGTTGATCTTAACACG+GGG 0.771491 8_2:-58264050 None:intergenic
TGTAGGTAAGAACATCAACG+GGG 0.839564 8_2:-58264247 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTCATGATGATATGT+TGG + chr8_2:58264458-58264477 Msa1257640:intron 20.0%
!!! TTCAAATGTTTTTGAAGTAA+TGG + chr8_2:58264841-58264860 Msa1257640:intron 20.0%
!!! AATTTTCATTTCGTGTAATT+TGG + chr8_2:58265061-58265080 Msa1257640:intron 20.0%
!!! ATTTTCATTTCGTGTAATTT+GGG + chr8_2:58265062-58265081 Msa1257640:intron 20.0%
!! AATTGTAAATATGAGACAAT+TGG - chr8_2:58265089-58265108 None:intergenic 20.0%
!!! TTATTTTCATGATGATATGT+TGG + chr8_2:58264458-58264477 Msa1257640:intron 20.0%
!!! TTCAAATGTTTTTGAAGTAA+TGG + chr8_2:58264841-58264860 Msa1257640:intron 20.0%
!!! AATTTTCATTTCGTGTAATT+TGG + chr8_2:58265061-58265080 Msa1257640:intron 20.0%
!!! ATTTTCATTTCGTGTAATTT+GGG + chr8_2:58265062-58265081 Msa1257640:intron 20.0%
!! AATTGTAAATATGAGACAAT+TGG - chr8_2:58265089-58265108 None:intergenic 20.0%
!! AAAAGAAAAAGATACTGGTT+TGG - chr8_2:58263632-58263651 None:intergenic 25.0%
!!! TTGGATGAATATTTTTGACT+GGG + chr8_2:58264477-58264496 Msa1257640:intron 25.0%
!!! AATTACTATTTTTGAGCTCT+AGG + chr8_2:58264526-58264545 Msa1257640:intron 25.0%
!!! ATTACTATTTTTGAGCTCTA+GGG + chr8_2:58264527-58264546 Msa1257640:intron 25.0%
! GTCAAATTACAAATTAGTTC+CGG + chr8_2:58264565-58264584 Msa1257640:intron 25.0%
! CTAAAAATTTCTACTCCAAA+AGG - chr8_2:58264652-58264671 None:intergenic 25.0%
! AACTTATGTTGATCTCTATT+CGG - chr8_2:58264922-58264941 None:intergenic 25.0%
! TGTTTATTCACTCTTAATTC+AGG + chr8_2:58265125-58265144 Msa1257640:intron 25.0%
! GTTTATTCACTCTTAATTCA+GGG + chr8_2:58265126-58265145 Msa1257640:intron 25.0%
! TTTATTCACTCTTAATTCAG+GGG + chr8_2:58265127-58265146 Msa1257640:intron 25.0%
!! AGTGTGAAATAAAGTGTTAT+TGG + chr8_2:58265225-58265244 Msa1257640:intron 25.0%
!! AAAAGAAAAAGATACTGGTT+TGG - chr8_2:58263632-58263651 None:intergenic 25.0%
!!! TTGGATGAATATTTTTGACT+GGG + chr8_2:58264477-58264496 Msa1257640:intron 25.0%
!!! AATTACTATTTTTGAGCTCT+AGG + chr8_2:58264526-58264545 Msa1257640:intron 25.0%
!!! ATTACTATTTTTGAGCTCTA+GGG + chr8_2:58264527-58264546 Msa1257640:intron 25.0%
! GTCAAATTACAAATTAGTTC+CGG + chr8_2:58264565-58264584 Msa1257640:intron 25.0%
! CTAAAAATTTCTACTCCAAA+AGG - chr8_2:58264652-58264671 None:intergenic 25.0%
! AACTTATGTTGATCTCTATT+CGG - chr8_2:58264922-58264941 None:intergenic 25.0%
! TGTTTATTCACTCTTAATTC+AGG + chr8_2:58265125-58265144 Msa1257640:intron 25.0%
! GTTTATTCACTCTTAATTCA+GGG + chr8_2:58265126-58265145 Msa1257640:intron 25.0%
! TTTATTCACTCTTAATTCAG+GGG + chr8_2:58265127-58265146 Msa1257640:intron 25.0%
!! AGTGTGAAATAAAGTGTTAT+TGG + chr8_2:58265225-58265244 Msa1257640:intron 25.0%
GGAAGAAAAGAAAAAGATAC+TGG - chr8_2:58263637-58263656 None:intergenic 30.0%
ATATGAATAGCAAATGTGTG+TGG - chr8_2:58263729-58263748 None:intergenic 30.0%
!! GTTGGATGAATATTTTTGAC+TGG + chr8_2:58264476-58264495 Msa1257640:intron 30.0%
ATATCAATACATAGTGTCTC+CGG - chr8_2:58264587-58264606 None:intergenic 30.0%
! TCGGTTTGACATAAAAACAA+GGG + chr8_2:58264710-58264729 Msa1257640:intron 30.0%
!!! TTTTTGAAGTAATGGTCCAT+TGG + chr8_2:58264849-58264868 Msa1257640:intron 30.0%
!!! TTTTGAAGTAATGGTCCATT+GGG + chr8_2:58264850-58264869 Msa1257640:intron 30.0%
! TGTTGTTTAGTTTCATGAAC+TGG - chr8_2:58264889-58264908 None:intergenic 30.0%
GTTCTATTAAACTGACAGAA+TGG + chr8_2:58265004-58265023 Msa1257640:intron 30.0%
! ATTGACGATCTTTAAGTTCA+AGG + chr8_2:58265035-58265054 Msa1257640:intron 30.0%
GTCTCATATTTACAATTTCG+AGG + chr8_2:58265092-58265111 Msa1257640:intron 30.0%
TTCACTATAGAAAGTGAGAA+AGG + chr8_2:58265198-58265217 Msa1257640:intron 30.0%
! AAATAAAGTGTTATTGGTGC+AGG + chr8_2:58265231-58265250 Msa1257640:intron 30.0%
!!! TATTCCTGTCCTTAGTTTTT+TGG + chr8_2:58265318-58265337 Msa1257640:CDS 30.0%
!! GTTGTTTCTCCAAAAAACTA+AGG - chr8_2:58265330-58265349 None:intergenic 30.0%
TATGAAGTCATCAGTCTAAA+AGG + chr8_2:58265409-58265428 Msa1257640:CDS 30.0%
TCTAAAAGGTTACACTTCTT+GGG + chr8_2:58265423-58265442 Msa1257640:CDS 30.0%
! TTTGTCTTTTACATTTCCCA+TGG + chr8_2:58265738-58265757 Msa1257640:three_prime_UTR 30.0%
TACTAAGCAAAAAACACTTG+CGG - chr8_2:58265774-58265793 None:intergenic 30.0%
!! TTAGTACTTGCTATCCAAAA+TGG + chr8_2:58265788-58265807 Msa1257640:three_prime_UTR 30.0%
CATAGAACTTGAAATTTGAC+TGG - chr8_2:58265866-58265885 None:intergenic 30.0%
! GCTTTTGTAATTTGATCTTG+CGG - chr8_2:58263568-58263587 None:intergenic 30.0%
GGAAGAAAAGAAAAAGATAC+TGG - chr8_2:58263637-58263656 None:intergenic 30.0%
ATATGAATAGCAAATGTGTG+TGG - chr8_2:58263729-58263748 None:intergenic 30.0%
!! GTTGGATGAATATTTTTGAC+TGG + chr8_2:58264476-58264495 Msa1257640:intron 30.0%
ATATCAATACATAGTGTCTC+CGG - chr8_2:58264587-58264606 None:intergenic 30.0%
! TCGGTTTGACATAAAAACAA+GGG + chr8_2:58264710-58264729 Msa1257640:intron 30.0%
!!! TTTTTGAAGTAATGGTCCAT+TGG + chr8_2:58264849-58264868 Msa1257640:intron 30.0%
!!! TTTTGAAGTAATGGTCCATT+GGG + chr8_2:58264850-58264869 Msa1257640:intron 30.0%
! TGTTGTTTAGTTTCATGAAC+TGG - chr8_2:58264889-58264908 None:intergenic 30.0%
GTTCTATTAAACTGACAGAA+TGG + chr8_2:58265004-58265023 Msa1257640:intron 30.0%
! ATTGACGATCTTTAAGTTCA+AGG + chr8_2:58265035-58265054 Msa1257640:intron 30.0%
GTCTCATATTTACAATTTCG+AGG + chr8_2:58265092-58265111 Msa1257640:intron 30.0%
TTCACTATAGAAAGTGAGAA+AGG + chr8_2:58265198-58265217 Msa1257640:intron 30.0%
! AAATAAAGTGTTATTGGTGC+AGG + chr8_2:58265231-58265250 Msa1257640:intron 30.0%
!!! TATTCCTGTCCTTAGTTTTT+TGG + chr8_2:58265318-58265337 Msa1257640:CDS 30.0%
!! GTTGTTTCTCCAAAAAACTA+AGG - chr8_2:58265330-58265349 None:intergenic 30.0%
TATGAAGTCATCAGTCTAAA+AGG + chr8_2:58265409-58265428 Msa1257640:CDS 30.0%
TCTAAAAGGTTACACTTCTT+GGG + chr8_2:58265423-58265442 Msa1257640:CDS 30.0%
! TTTGTCTTTTACATTTCCCA+TGG + chr8_2:58265738-58265757 Msa1257640:three_prime_UTR 30.0%
TACTAAGCAAAAAACACTTG+CGG - chr8_2:58265774-58265793 None:intergenic 30.0%
!! TTAGTACTTGCTATCCAAAA+TGG + chr8_2:58265788-58265807 Msa1257640:three_prime_UTR 30.0%
CATAGAACTTGAAATTTGAC+TGG - chr8_2:58265866-58265885 None:intergenic 30.0%
!! ATACTGGTTTGGAAAACAGT+AGG - chr8_2:58263621-58263640 None:intergenic 35.0%
!! GATGATGATTTGTTAGTTGC+AGG - chr8_2:58263753-58263772 None:intergenic 35.0%
ATGTAGGTAAGAACATCAAC+GGG - chr8_2:58264251-58264270 None:intergenic 35.0%
GATGTAGGTAAGAACATCAA+CGG - chr8_2:58264252-58264271 None:intergenic 35.0%
TTTCTGGGTTTCCTTCTAAT+CGG + chr8_2:58264282-58264301 Msa1257640:CDS 35.0%
GTACCAATTTGGATTCATCT+CGG + chr8_2:58264318-58264337 Msa1257640:CDS 35.0%
AAACCGAGATGAATCCAAAT+TGG - chr8_2:58264324-58264343 None:intergenic 35.0%
ATTTGGATTCATCTCGGTTT+CGG + chr8_2:58264324-58264343 Msa1257640:CDS 35.0%
!! GTCGGTTTGACATAAAAACA+AGG + chr8_2:58264709-58264728 Msa1257640:intron 35.0%
! CAACGATTGAAGACATGTTT+TGG - chr8_2:58264811-58264830 None:intergenic 35.0%
! TTTGAAGTAATGGTCCATTG+GGG + chr8_2:58264851-58264870 Msa1257640:intron 35.0%
CTCACTTTCTATAGTGAACA+CGG - chr8_2:58265196-58265215 None:intergenic 35.0%
TTCTCCAAAAAACTAAGGAC+AGG - chr8_2:58265325-58265344 None:intergenic 35.0%
GTCTAAAAGGTTACACTTCT+TGG + chr8_2:58265422-58265441 Msa1257640:CDS 35.0%
TTTCCTTTGGTCCCTAATAA+TGG - chr8_2:58265482-58265501 None:intergenic 35.0%
CTCATTATTCATGTGCACAT+TGG - chr8_2:58265611-58265630 None:intergenic 35.0%
CAATGTGCACATGAATAATG+AGG + chr8_2:58265609-58265628 Msa1257640:CDS 35.0%
TGAATAATGAGGAGGAACAA+AGG + chr8_2:58265620-58265639 Msa1257640:CDS 35.0%
GGATTCTGCTAAAACTATCT+TGG + chr8_2:58265648-58265667 Msa1257640:CDS 35.0%
TTCTGCTAAAACTATCTTGG+AGG + chr8_2:58265651-58265670 Msa1257640:CDS 35.0%
TTTAAATACCCAACTGAGTC+TGG - chr8_2:58265678-58265697 None:intergenic 35.0%
GTTAGTGAGTCTGTTAGATA+TGG - chr8_2:58265706-58265725 None:intergenic 35.0%
TCTAACAGACTCACTAACTA+CGG + chr8_2:58265708-58265727 Msa1257640:three_prime_UTR 35.0%
GAATTCGGATCTTTGTAGTA+TGG + chr8_2:58265816-58265835 Msa1257640:three_prime_UTR 35.0%
!! ATACTGGTTTGGAAAACAGT+AGG - chr8_2:58263621-58263640 None:intergenic 35.0%
!! GATGATGATTTGTTAGTTGC+AGG - chr8_2:58263753-58263772 None:intergenic 35.0%
ATGTAGGTAAGAACATCAAC+GGG - chr8_2:58264251-58264270 None:intergenic 35.0%
GATGTAGGTAAGAACATCAA+CGG - chr8_2:58264252-58264271 None:intergenic 35.0%
TTTCTGGGTTTCCTTCTAAT+CGG + chr8_2:58264282-58264301 Msa1257640:CDS 35.0%
GTACCAATTTGGATTCATCT+CGG + chr8_2:58264318-58264337 Msa1257640:CDS 35.0%
AAACCGAGATGAATCCAAAT+TGG - chr8_2:58264324-58264343 None:intergenic 35.0%
ATTTGGATTCATCTCGGTTT+CGG + chr8_2:58264324-58264343 Msa1257640:CDS 35.0%
!! GTCGGTTTGACATAAAAACA+AGG + chr8_2:58264709-58264728 Msa1257640:intron 35.0%
! CAACGATTGAAGACATGTTT+TGG - chr8_2:58264811-58264830 None:intergenic 35.0%
! TTTGAAGTAATGGTCCATTG+GGG + chr8_2:58264851-58264870 Msa1257640:intron 35.0%
CTCACTTTCTATAGTGAACA+CGG - chr8_2:58265196-58265215 None:intergenic 35.0%
TTCTCCAAAAAACTAAGGAC+AGG - chr8_2:58265325-58265344 None:intergenic 35.0%
GTCTAAAAGGTTACACTTCT+TGG + chr8_2:58265422-58265441 Msa1257640:CDS 35.0%
TTTCCTTTGGTCCCTAATAA+TGG - chr8_2:58265482-58265501 None:intergenic 35.0%
CTCATTATTCATGTGCACAT+TGG - chr8_2:58265611-58265630 None:intergenic 35.0%
CAATGTGCACATGAATAATG+AGG + chr8_2:58265609-58265628 Msa1257640:CDS 35.0%
TGAATAATGAGGAGGAACAA+AGG + chr8_2:58265620-58265639 Msa1257640:CDS 35.0%
GGATTCTGCTAAAACTATCT+TGG + chr8_2:58265648-58265667 Msa1257640:CDS 35.0%
TTCTGCTAAAACTATCTTGG+AGG + chr8_2:58265651-58265670 Msa1257640:CDS 35.0%
TTTAAATACCCAACTGAGTC+TGG - chr8_2:58265678-58265697 None:intergenic 35.0%
GTTAGTGAGTCTGTTAGATA+TGG - chr8_2:58265706-58265725 None:intergenic 35.0%
TCTAACAGACTCACTAACTA+CGG + chr8_2:58265708-58265727 Msa1257640:three_prime_UTR 35.0%
GAATTCGGATCTTTGTAGTA+TGG + chr8_2:58265816-58265835 Msa1257640:three_prime_UTR 35.0%
CCGAATAACACTGAAACAGT+GGG - chr8_2:58263597-58263616 None:intergenic 40.0%
! CCCACTGTTTCAGTGTTATT+CGG + chr8_2:58263594-58263613 Msa1257640:five_prime_UTR 40.0%
ACCGAATAACACTGAAACAG+TGG - chr8_2:58263598-58263617 None:intergenic 40.0%
TGTGTGTGAAAGTAACACAC+TGG - chr8_2:58263669-58263688 None:intergenic 40.0%
TCAATCATCATGCACAAGAG+CGG + chr8_2:58263774-58263793 Msa1257640:exon 40.0%
! GTTTGAGATGGGTTTGAAGA+AGG - chr8_2:58263844-58263863 None:intergenic 40.0%
! ATCTTGTTGTGACGCTTTGT+GGG - chr8_2:58263882-58263901 None:intergenic 40.0%
! AGCAGTAACGGAGTATTCAA+CGG - chr8_2:58264075-58264094 None:intergenic 40.0%
CTAGGCTTAATCTTCTTCAG+AGG + chr8_2:58264147-58264166 Msa1257640:CDS 40.0%
TGTAGGTAAGAACATCAACG+GGG - chr8_2:58264250-58264269 None:intergenic 40.0%
ATGTTCTTACCTACATCGCA+TGG + chr8_2:58264255-58264274 Msa1257640:CDS 40.0%
TTCTGGGTTTCCTTCTAATC+GGG + chr8_2:58264283-58264302 Msa1257640:CDS 40.0%
TTTCCTTCTAATCGGGTCAT+CGG + chr8_2:58264290-58264309 Msa1257640:CDS 40.0%
ATTAAGTCATCGTCTCAACG+AGG - chr8_2:58264685-58264704 None:intergenic 40.0%
CGTTGAGACGATGACTTAAT+TGG + chr8_2:58264685-58264704 Msa1257640:intron 40.0%
GACGATGACTTAATTGGTGT+CGG + chr8_2:58264691-58264710 Msa1257640:intron 40.0%
TGCATATGAGAAAGAAACGC+TGG + chr8_2:58265354-58265373 Msa1257640:CDS 40.0%
GTTCCATTATTAGGGACCAA+AGG + chr8_2:58265476-58265495 Msa1257640:CDS 40.0%
! ACACAGGGTGAATTTTCCTT+TGG - chr8_2:58265495-58265514 None:intergenic 40.0%
! AATTCACCCTGTGTCTGTTT+TGG + chr8_2:58265501-58265520 Msa1257640:CDS 40.0%
!!! GTTTTGGCTAAGGGGTTTTA+TGG + chr8_2:58265517-58265536 Msa1257640:CDS 40.0%
TGTGCACATGAATAATGAGG+AGG + chr8_2:58265612-58265631 Msa1257640:CDS 40.0%
TAAGCAAAAAACACTTGCGG+TGG - chr8_2:58265771-58265790 None:intergenic 40.0%
!! GTACTTGCTATCCAAAATGG+TGG + chr8_2:58265791-58265810 Msa1257640:three_prime_UTR 40.0%
TCCAAAATGGTGGCTGAATT+CGG + chr8_2:58265801-58265820 Msa1257640:three_prime_UTR 40.0%
CCGAATAACACTGAAACAGT+GGG - chr8_2:58263597-58263616 None:intergenic 40.0%
! CCCACTGTTTCAGTGTTATT+CGG + chr8_2:58263594-58263613 Msa1257640:five_prime_UTR 40.0%
ACCGAATAACACTGAAACAG+TGG - chr8_2:58263598-58263617 None:intergenic 40.0%
TGTGTGTGAAAGTAACACAC+TGG - chr8_2:58263669-58263688 None:intergenic 40.0%
TCAATCATCATGCACAAGAG+CGG + chr8_2:58263774-58263793 Msa1257640:exon 40.0%
! GTTTGAGATGGGTTTGAAGA+AGG - chr8_2:58263844-58263863 None:intergenic 40.0%
! ATCTTGTTGTGACGCTTTGT+GGG - chr8_2:58263882-58263901 None:intergenic 40.0%
! AGCAGTAACGGAGTATTCAA+CGG - chr8_2:58264075-58264094 None:intergenic 40.0%
CTAGGCTTAATCTTCTTCAG+AGG + chr8_2:58264147-58264166 Msa1257640:CDS 40.0%
TGTAGGTAAGAACATCAACG+GGG - chr8_2:58264250-58264269 None:intergenic 40.0%
ATGTTCTTACCTACATCGCA+TGG + chr8_2:58264255-58264274 Msa1257640:CDS 40.0%
TTCTGGGTTTCCTTCTAATC+GGG + chr8_2:58264283-58264302 Msa1257640:CDS 40.0%
TTTCCTTCTAATCGGGTCAT+CGG + chr8_2:58264290-58264309 Msa1257640:CDS 40.0%
ATTAAGTCATCGTCTCAACG+AGG - chr8_2:58264685-58264704 None:intergenic 40.0%
CGTTGAGACGATGACTTAAT+TGG + chr8_2:58264685-58264704 Msa1257640:intron 40.0%
GACGATGACTTAATTGGTGT+CGG + chr8_2:58264691-58264710 Msa1257640:intron 40.0%
TGCATATGAGAAAGAAACGC+TGG + chr8_2:58265354-58265373 Msa1257640:CDS 40.0%
GTTCCATTATTAGGGACCAA+AGG + chr8_2:58265476-58265495 Msa1257640:CDS 40.0%
! ACACAGGGTGAATTTTCCTT+TGG - chr8_2:58265495-58265514 None:intergenic 40.0%
! AATTCACCCTGTGTCTGTTT+TGG + chr8_2:58265501-58265520 Msa1257640:CDS 40.0%
!!! GTTTTGGCTAAGGGGTTTTA+TGG + chr8_2:58265517-58265536 Msa1257640:CDS 40.0%
TGTGCACATGAATAATGAGG+AGG + chr8_2:58265612-58265631 Msa1257640:CDS 40.0%
TAAGCAAAAAACACTTGCGG+TGG - chr8_2:58265771-58265790 None:intergenic 40.0%
!! GTACTTGCTATCCAAAATGG+TGG + chr8_2:58265791-58265810 Msa1257640:three_prime_UTR 40.0%
TCCAAAATGGTGGCTGAATT+CGG + chr8_2:58265801-58265820 Msa1257640:three_prime_UTR 40.0%
GTAACACACTGGACTGTGAA+GGG - chr8_2:58263658-58263677 None:intergenic 45.0%
AGTAACACACTGGACTGTGA+AGG - chr8_2:58263659-58263678 None:intergenic 45.0%
AGAAGGCTTGGGTTAAGTCA+AGG - chr8_2:58263827-58263846 None:intergenic 45.0%
! GATGGGTTTGAAGAAGGCTT+GGG - chr8_2:58263838-58263857 None:intergenic 45.0%
! AGATGGGTTTGAAGAAGGCT+TGG - chr8_2:58263839-58263858 None:intergenic 45.0%
! GATCTTGTTGTGACGCTTTG+TGG - chr8_2:58263883-58263902 None:intergenic 45.0%
CACAACAAGATCTCCGTCAT+CGG + chr8_2:58263891-58263910 Msa1257640:CDS 45.0%
AGTTAGGATGGTCTGAGCAA+TGG - chr8_2:58263937-58263956 None:intergenic 45.0%
AGTTGATCTTAACACGGGGA+AGG - chr8_2:58264049-58264068 None:intergenic 45.0%
! GAGGAGTTGATCTTAACACG+GGG - chr8_2:58264053-58264072 None:intergenic 45.0%
! GGAGGAGTTGATCTTAACAC+GGG - chr8_2:58264054-58264073 None:intergenic 45.0%
! CGGAGGAGTTGATCTTAACA+CGG - chr8_2:58264055-58264074 None:intergenic 45.0%
! AGTAACGGAGTATTCAACGG+AGG - chr8_2:58264072-58264091 None:intergenic 45.0%
GTTGAATACTCCGTTACTGC+TGG + chr8_2:58264074-58264093 Msa1257640:CDS 45.0%
GAGGAATCTTTCTCTGTTCC+AGG + chr8_2:58264166-58264185 Msa1257640:CDS 45.0%
ACGATGATCAGAACCGTTTC+CGG - chr8_2:58264221-58264240 None:intergenic 45.0%
AGAAAGCTTCCATGCGATGT+AGG - chr8_2:58264267-58264286 None:intergenic 45.0%
TACATCGCATGGAAGCTTTC+TGG + chr8_2:58264266-58264285 Msa1257640:CDS 45.0%
ACATCGCATGGAAGCTTTCT+GGG + chr8_2:58264267-58264286 Msa1257640:CDS 45.0%
TTCCTTCTAATCGGGTCATC+GGG + chr8_2:58264291-58264310 Msa1257640:CDS 45.0%
! CACCAACGTATGTTGCCTTT+TGG + chr8_2:58264634-58264653 Msa1257640:intron 45.0%
CTCCAAAAGGCAACATACGT+TGG - chr8_2:58264639-58264658 None:intergenic 45.0%
GGCTGAGACGCTAATCTAAT+TGG - chr8_2:58264756-58264775 None:intergenic 45.0%
TTGTGGTCTAGCATCAGCAT+TGG + chr8_2:58265292-58265311 Msa1257640:CDS 45.0%
GTTACACTTCTTGGGCCATT+GGG + chr8_2:58265431-58265450 Msa1257640:CDS 45.0%
CTTGGCGCGTTCCATTATTA+GGG + chr8_2:58265468-58265487 Msa1257640:CDS 45.0%
CCTTAGCCAAAACAGACACA+GGG - chr8_2:58265510-58265529 None:intergenic 45.0%
!!! CCTGTGTCTGTTTTGGCTAA+GGG + chr8_2:58265508-58265527 Msa1257640:CDS 45.0%
!!! CTGTGTCTGTTTTGGCTAAG+GGG + chr8_2:58265509-58265528 Msa1257640:CDS 45.0%
!! GCTAAGGGGTTTTATGGCAT+AGG + chr8_2:58265523-58265542 Msa1257640:CDS 45.0%
ATGAGGAGGAACAAAGGCTT+AGG + chr8_2:58265626-58265645 Msa1257640:CDS 45.0%
TGAGGAGGAACAAAGGCTTA+GGG + chr8_2:58265627-58265646 Msa1257640:CDS 45.0%
! TCCGAATTCAGCCACCATTT+TGG - chr8_2:58265805-58265824 None:intergenic 45.0%
GTAACACACTGGACTGTGAA+GGG - chr8_2:58263658-58263677 None:intergenic 45.0%
AGTAACACACTGGACTGTGA+AGG - chr8_2:58263659-58263678 None:intergenic 45.0%
AGAAGGCTTGGGTTAAGTCA+AGG - chr8_2:58263827-58263846 None:intergenic 45.0%
! GATGGGTTTGAAGAAGGCTT+GGG - chr8_2:58263838-58263857 None:intergenic 45.0%
! AGATGGGTTTGAAGAAGGCT+TGG - chr8_2:58263839-58263858 None:intergenic 45.0%
! GATCTTGTTGTGACGCTTTG+TGG - chr8_2:58263883-58263902 None:intergenic 45.0%
CACAACAAGATCTCCGTCAT+CGG + chr8_2:58263891-58263910 Msa1257640:CDS 45.0%
AGTTAGGATGGTCTGAGCAA+TGG - chr8_2:58263937-58263956 None:intergenic 45.0%
AGTTGATCTTAACACGGGGA+AGG - chr8_2:58264049-58264068 None:intergenic 45.0%
! GAGGAGTTGATCTTAACACG+GGG - chr8_2:58264053-58264072 None:intergenic 45.0%
! GGAGGAGTTGATCTTAACAC+GGG - chr8_2:58264054-58264073 None:intergenic 45.0%
! CGGAGGAGTTGATCTTAACA+CGG - chr8_2:58264055-58264074 None:intergenic 45.0%
! AGTAACGGAGTATTCAACGG+AGG - chr8_2:58264072-58264091 None:intergenic 45.0%
GTTGAATACTCCGTTACTGC+TGG + chr8_2:58264074-58264093 Msa1257640:CDS 45.0%
GAGGAATCTTTCTCTGTTCC+AGG + chr8_2:58264166-58264185 Msa1257640:CDS 45.0%
ACGATGATCAGAACCGTTTC+CGG - chr8_2:58264221-58264240 None:intergenic 45.0%
AGAAAGCTTCCATGCGATGT+AGG - chr8_2:58264267-58264286 None:intergenic 45.0%
TACATCGCATGGAAGCTTTC+TGG + chr8_2:58264266-58264285 Msa1257640:CDS 45.0%
ACATCGCATGGAAGCTTTCT+GGG + chr8_2:58264267-58264286 Msa1257640:CDS 45.0%
TTCCTTCTAATCGGGTCATC+GGG + chr8_2:58264291-58264310 Msa1257640:CDS 45.0%
! CACCAACGTATGTTGCCTTT+TGG + chr8_2:58264634-58264653 Msa1257640:intron 45.0%
CTCCAAAAGGCAACATACGT+TGG - chr8_2:58264639-58264658 None:intergenic 45.0%
GGCTGAGACGCTAATCTAAT+TGG - chr8_2:58264756-58264775 None:intergenic 45.0%
TTGTGGTCTAGCATCAGCAT+TGG + chr8_2:58265292-58265311 Msa1257640:CDS 45.0%
GTTACACTTCTTGGGCCATT+GGG + chr8_2:58265431-58265450 Msa1257640:CDS 45.0%
CTTGGCGCGTTCCATTATTA+GGG + chr8_2:58265468-58265487 Msa1257640:CDS 45.0%
CCTTAGCCAAAACAGACACA+GGG - chr8_2:58265510-58265529 None:intergenic 45.0%
!!! CCTGTGTCTGTTTTGGCTAA+GGG + chr8_2:58265508-58265527 Msa1257640:CDS 45.0%
!!! CTGTGTCTGTTTTGGCTAAG+GGG + chr8_2:58265509-58265528 Msa1257640:CDS 45.0%
!! GCTAAGGGGTTTTATGGCAT+AGG + chr8_2:58265523-58265542 Msa1257640:CDS 45.0%
ATGAGGAGGAACAAAGGCTT+AGG + chr8_2:58265626-58265645 Msa1257640:CDS 45.0%
TGAGGAGGAACAAAGGCTTA+GGG + chr8_2:58265627-58265646 Msa1257640:CDS 45.0%
! TCCGAATTCAGCCACCATTT+TGG - chr8_2:58265805-58265824 None:intergenic 45.0%
TTGTGACGCTTTGTGGGTGA+TGG - chr8_2:58263876-58263895 None:intergenic 50.0%
GGTGAGGTCTTGAGTTAGGA+TGG - chr8_2:58263949-58263968 None:intergenic 50.0%
AACAAACCCGACAAACTCCG+CGG + chr8_2:58263990-58264009 Msa1257640:CDS 50.0%
GGCGGTGACAATACAGAGAT+CGG - chr8_2:58264102-58264121 None:intergenic 50.0%
GATCTCTGTATTGTCACCGC+CGG + chr8_2:58264101-58264120 Msa1257640:CDS 50.0%
! CCAAAGGGGGTATAATTGCC+TGG - chr8_2:58264187-58264206 None:intergenic 50.0%
CCAGGCAATTATACCCCCTT+TGG + chr8_2:58264184-58264203 Msa1257640:CDS 50.0%
GGTAAGAACATCAACGGGGT+TGG - chr8_2:58264246-58264265 None:intergenic 50.0%
TTCTAATCGGGTCATCGGGT+CGG + chr8_2:58264295-58264314 Msa1257640:CDS 50.0%
TCTCAGCCATGAGAACGAGA+AGG + chr8_2:58264768-58264787 Msa1257640:intron 50.0%
CTCAGCCATGAGAACGAGAA+GGG + chr8_2:58264769-58264788 Msa1257640:intron 50.0%
TGTAGCCCTTCTCGTTCTCA+TGG - chr8_2:58264777-58264796 None:intergenic 50.0%
GGCAAGTTCTATGTCCCCAA+TGG - chr8_2:58264868-58264887 None:intergenic 50.0%
TTGGTGCAGGCATGCATAGT+AGG + chr8_2:58265244-58265263 Msa1257640:intron 50.0%
TGGTGCAGGCATGCATAGTA+GGG + chr8_2:58265245-58265264 Msa1257640:intron 50.0%
GGGATAGTTCAGTGGCATTG+TGG + chr8_2:58265275-58265294 Msa1257640:CDS 50.0%
! TGGTCTAGCATCAGCATTGG+TGG + chr8_2:58265295-58265314 Msa1257640:CDS 50.0%
GGTTACACTTCTTGGGCCAT+TGG + chr8_2:58265430-58265449 Msa1257640:CDS 50.0%
TTCTTGGGCCATTGGGTACT+CGG + chr8_2:58265438-58265457 Msa1257640:CDS 50.0%
GCTTGGCGCGTTCCATTATT+AGG + chr8_2:58265467-58265486 Msa1257640:CDS 50.0%
!!! CCCTGTGTCTGTTTTGGCTA+AGG + chr8_2:58265507-58265526 Msa1257640:CDS 50.0%
CCCTTAGCCAAAACAGACAC+AGG - chr8_2:58265511-58265530 None:intergenic 50.0%
TTGGAGGTCCAGACTCAGTT+GGG + chr8_2:58265667-58265686 Msa1257640:CDS 50.0%
TTGCGGTGGAAGACAACCAT+GGG - chr8_2:58265757-58265776 None:intergenic 50.0%
TTGTGACGCTTTGTGGGTGA+TGG - chr8_2:58263876-58263895 None:intergenic 50.0%
GGTGAGGTCTTGAGTTAGGA+TGG - chr8_2:58263949-58263968 None:intergenic 50.0%
AACAAACCCGACAAACTCCG+CGG + chr8_2:58263990-58264009 Msa1257640:CDS 50.0%
GGCGGTGACAATACAGAGAT+CGG - chr8_2:58264102-58264121 None:intergenic 50.0%
GATCTCTGTATTGTCACCGC+CGG + chr8_2:58264101-58264120 Msa1257640:CDS 50.0%
! CCAAAGGGGGTATAATTGCC+TGG - chr8_2:58264187-58264206 None:intergenic 50.0%
CCAGGCAATTATACCCCCTT+TGG + chr8_2:58264184-58264203 Msa1257640:CDS 50.0%
GGTAAGAACATCAACGGGGT+TGG - chr8_2:58264246-58264265 None:intergenic 50.0%
TTCTAATCGGGTCATCGGGT+CGG + chr8_2:58264295-58264314 Msa1257640:CDS 50.0%
TCTCAGCCATGAGAACGAGA+AGG + chr8_2:58264768-58264787 Msa1257640:intron 50.0%
CTCAGCCATGAGAACGAGAA+GGG + chr8_2:58264769-58264788 Msa1257640:intron 50.0%
TGTAGCCCTTCTCGTTCTCA+TGG - chr8_2:58264777-58264796 None:intergenic 50.0%
GGCAAGTTCTATGTCCCCAA+TGG - chr8_2:58264868-58264887 None:intergenic 50.0%
TTGGTGCAGGCATGCATAGT+AGG + chr8_2:58265244-58265263 Msa1257640:intron 50.0%
TGGTGCAGGCATGCATAGTA+GGG + chr8_2:58265245-58265264 Msa1257640:intron 50.0%
GGGATAGTTCAGTGGCATTG+TGG + chr8_2:58265275-58265294 Msa1257640:CDS 50.0%
! TGGTCTAGCATCAGCATTGG+TGG + chr8_2:58265295-58265314 Msa1257640:CDS 50.0%
GGTTACACTTCTTGGGCCAT+TGG + chr8_2:58265430-58265449 Msa1257640:CDS 50.0%
TTCTTGGGCCATTGGGTACT+CGG + chr8_2:58265438-58265457 Msa1257640:CDS 50.0%
GCTTGGCGCGTTCCATTATT+AGG + chr8_2:58265467-58265486 Msa1257640:CDS 50.0%
!!! CCCTGTGTCTGTTTTGGCTA+AGG + chr8_2:58265507-58265526 Msa1257640:CDS 50.0%
CCCTTAGCCAAAACAGACAC+AGG - chr8_2:58265511-58265530 None:intergenic 50.0%
TTGGAGGTCCAGACTCAGTT+GGG + chr8_2:58265667-58265686 Msa1257640:CDS 50.0%
TTGCGGTGGAAGACAACCAT+GGG - chr8_2:58265757-58265776 None:intergenic 50.0%
AGCGGTTCTGCTTCGACGTT+AGG + chr8_2:58263792-58263811 Msa1257640:CDS 55.0%
GGGTTAAGTCAAGGCCGTCT+GGG - chr8_2:58263818-58263837 None:intergenic 55.0%
TGGGTTAAGTCAAGGCCGTC+TGG - chr8_2:58263819-58263838 None:intergenic 55.0%
!! GGTGGTGCTGCGTTTGAGAT+GGG - chr8_2:58263855-58263874 None:intergenic 55.0%
!! TGGTGGTGCTGCGTTTGAGA+TGG - chr8_2:58263856-58263875 None:intergenic 55.0%
! TGACGCTTTGTGGGTGATGG+TGG - chr8_2:58263873-58263892 None:intergenic 55.0%
AATGGCCATGCCGACGTTAC+CGG - chr8_2:58263919-58263938 None:intergenic 55.0%
CGTCGGTGAGGTCTTGAGTT+AGG - chr8_2:58263953-58263972 None:intergenic 55.0%
GAAGATCAAGCATCTCGCCG+CGG - chr8_2:58264010-58264029 None:intergenic 55.0%
GAGATCGGAGCCAGCAGTAA+CGG - chr8_2:58264087-58264106 None:intergenic 55.0%
GACCCGATGACCCGATTAGA+AGG - chr8_2:58264296-58264315 None:intergenic 55.0%
TCTAATCGGGTCATCGGGTC+GGG + chr8_2:58264296-58264315 Msa1257640:CDS 55.0%
CATCGGGTCGGGTACCAATT+TGG + chr8_2:58264307-58264326 Msa1257640:CDS 55.0%
CCTGGAGGTGATCAGCAATG+AGG - chr8_2:58264352-58264371 None:intergenic 55.0%
CCTCATTGCTGATCACCTCC+AGG + chr8_2:58264349-58264368 Msa1257640:CDS 55.0%
!! GAACATCCTGAGCGTTGACC+TGG - chr8_2:58264370-58264389 None:intergenic 55.0%
GGTCAACGCTCAGGATGTTC+AGG + chr8_2:58264370-58264389 Msa1257640:CDS 55.0%
GGTGCAGGCATGCATAGTAG+GGG + chr8_2:58265246-58265265 Msa1257640:intron 55.0%
GCATGCATAGTAGGGGAGCA+CGG + chr8_2:58265253-58265272 Msa1257640:CDS 55.0%
! CATGCATAGTAGGGGAGCAC+GGG + chr8_2:58265254-58265273 Msa1257640:CDS 55.0%
! ATGCATAGTAGGGGAGCACG+GGG + chr8_2:58265255-58265274 Msa1257640:CDS 55.0%
TTGAGCTTGCCAGCACAGCT+TGG + chr8_2:58265562-58265581 Msa1257640:CDS 55.0%
TTGCCAGCACAGCTTGGAAG+AGG + chr8_2:58265568-58265587 Msa1257640:CDS 55.0%
CAGCACAGCTTGGAAGAGGA+GGG + chr8_2:58265572-58265591 Msa1257640:CDS 55.0%
AGCACAGCTTGGAAGAGGAG+GGG + chr8_2:58265573-58265592 Msa1257640:CDS 55.0%
CTTGGAGGTCCAGACTCAGT+TGG + chr8_2:58265666-58265685 Msa1257640:CDS 55.0%
CTTGCGGTGGAAGACAACCA+TGG - chr8_2:58265758-58265777 None:intergenic 55.0%
AGCGGTTCTGCTTCGACGTT+AGG + chr8_2:58263792-58263811 Msa1257640:CDS 55.0%
GGGTTAAGTCAAGGCCGTCT+GGG - chr8_2:58263818-58263837 None:intergenic 55.0%
TGGGTTAAGTCAAGGCCGTC+TGG - chr8_2:58263819-58263838 None:intergenic 55.0%
!! GGTGGTGCTGCGTTTGAGAT+GGG - chr8_2:58263855-58263874 None:intergenic 55.0%
!! TGGTGGTGCTGCGTTTGAGA+TGG - chr8_2:58263856-58263875 None:intergenic 55.0%
! TGACGCTTTGTGGGTGATGG+TGG - chr8_2:58263873-58263892 None:intergenic 55.0%
AATGGCCATGCCGACGTTAC+CGG - chr8_2:58263919-58263938 None:intergenic 55.0%
CGTCGGTGAGGTCTTGAGTT+AGG - chr8_2:58263953-58263972 None:intergenic 55.0%
GAAGATCAAGCATCTCGCCG+CGG - chr8_2:58264010-58264029 None:intergenic 55.0%
GAGATCGGAGCCAGCAGTAA+CGG - chr8_2:58264087-58264106 None:intergenic 55.0%
GACCCGATGACCCGATTAGA+AGG - chr8_2:58264296-58264315 None:intergenic 55.0%
TCTAATCGGGTCATCGGGTC+GGG + chr8_2:58264296-58264315 Msa1257640:CDS 55.0%
CATCGGGTCGGGTACCAATT+TGG + chr8_2:58264307-58264326 Msa1257640:CDS 55.0%
CCTGGAGGTGATCAGCAATG+AGG - chr8_2:58264352-58264371 None:intergenic 55.0%
CCTCATTGCTGATCACCTCC+AGG + chr8_2:58264349-58264368 Msa1257640:CDS 55.0%
!! GAACATCCTGAGCGTTGACC+TGG - chr8_2:58264370-58264389 None:intergenic 55.0%
GGTCAACGCTCAGGATGTTC+AGG + chr8_2:58264370-58264389 Msa1257640:CDS 55.0%
GGTGCAGGCATGCATAGTAG+GGG + chr8_2:58265246-58265265 Msa1257640:intron 55.0%
GCATGCATAGTAGGGGAGCA+CGG + chr8_2:58265253-58265272 Msa1257640:CDS 55.0%
! CATGCATAGTAGGGGAGCAC+GGG + chr8_2:58265254-58265273 Msa1257640:CDS 55.0%
! ATGCATAGTAGGGGAGCACG+GGG + chr8_2:58265255-58265274 Msa1257640:CDS 55.0%
TTGAGCTTGCCAGCACAGCT+TGG + chr8_2:58265562-58265581 Msa1257640:CDS 55.0%
TTGCCAGCACAGCTTGGAAG+AGG + chr8_2:58265568-58265587 Msa1257640:CDS 55.0%
CAGCACAGCTTGGAAGAGGA+GGG + chr8_2:58265572-58265591 Msa1257640:CDS 55.0%
AGCACAGCTTGGAAGAGGAG+GGG + chr8_2:58265573-58265592 Msa1257640:CDS 55.0%
CTTGGAGGTCCAGACTCAGT+TGG + chr8_2:58265666-58265685 Msa1257640:CDS 55.0%
CTTGCGGTGGAAGACAACCA+TGG - chr8_2:58265758-58265777 None:intergenic 55.0%
GCTTCGACGTTAGGCCCAGA+CGG + chr8_2:58263801-58263820 Msa1257640:CDS 60.0%
AAGATCTCCGTCATCGGCGC+CGG + chr8_2:58263897-58263916 Msa1257640:CDS 60.0%
GTCGACGATGACGAGCTCGT+CGG - chr8_2:58263970-58263989 None:intergenic 60.0%
ATCTCGCCGCGGAGTTTGTC+GGG - chr8_2:58263999-58264018 None:intergenic 60.0%
CATCTCGCCGCGGAGTTTGT+CGG - chr8_2:58264000-58264019 None:intergenic 60.0%
GTATTGTCACCGCCGGTGCA+AGG + chr8_2:58264108-58264127 Msa1257640:CDS 60.0%
ACCACCGATCTGCCTTGCAC+CGG - chr8_2:58264123-58264142 None:intergenic 60.0%
GGCAGATCGGTGGTGAGTCT+AGG + chr8_2:58264129-58264148 Msa1257640:CDS 60.0%
GGCGAGTAACGAGCCAAAGG+GGG - chr8_2:58264200-58264219 None:intergenic 60.0%
CGGCGAGTAACGAGCCAAAG+GGG - chr8_2:58264201-58264220 None:intergenic 60.0%
CCGGCGAGTAACGAGCCAAA+GGG - chr8_2:58264202-58264221 None:intergenic 60.0%
! CCCTTTGGCTCGTTACTCGC+CGG + chr8_2:58264199-58264218 Msa1257640:CDS 60.0%
TCCGGCGAGTAACGAGCCAA+AGG - chr8_2:58264203-58264222 None:intergenic 60.0%
GGCTCGTTACTCGCCGGAAA+CGG + chr8_2:58264205-58264224 Msa1257640:CDS 60.0%
TCACCTCCAGGTCAACGCTC+AGG + chr8_2:58264361-58264380 Msa1257640:CDS 60.0%
!! CATCCTGAGCGTTGACCTGG+AGG - chr8_2:58264367-58264386 None:intergenic 60.0%
GGAGCACGGGGATAGTTCAG+TGG + chr8_2:58265267-58265286 Msa1257640:CDS 60.0%
TTGGGCCATTGGGTACTCGG+TGG + chr8_2:58265441-58265460 Msa1257640:CDS 60.0%
CCTCCTCTTCCAAGCTGTGC+TGG - chr8_2:58265574-58265593 None:intergenic 60.0%
CCAGCACAGCTTGGAAGAGG+AGG + chr8_2:58265571-58265590 Msa1257640:CDS 60.0%
!! CTTGGAAGAGGAGGGGTGCT+TGG + chr8_2:58265580-58265599 Msa1257640:CDS 60.0%
GCTTCGACGTTAGGCCCAGA+CGG + chr8_2:58263801-58263820 Msa1257640:CDS 60.0%
AAGATCTCCGTCATCGGCGC+CGG + chr8_2:58263897-58263916 Msa1257640:CDS 60.0%
GTCGACGATGACGAGCTCGT+CGG - chr8_2:58263970-58263989 None:intergenic 60.0%
ATCTCGCCGCGGAGTTTGTC+GGG - chr8_2:58263999-58264018 None:intergenic 60.0%
CATCTCGCCGCGGAGTTTGT+CGG - chr8_2:58264000-58264019 None:intergenic 60.0%
GTATTGTCACCGCCGGTGCA+AGG + chr8_2:58264108-58264127 Msa1257640:CDS 60.0%
ACCACCGATCTGCCTTGCAC+CGG - chr8_2:58264123-58264142 None:intergenic 60.0%
GGCAGATCGGTGGTGAGTCT+AGG + chr8_2:58264129-58264148 Msa1257640:CDS 60.0%
GGCGAGTAACGAGCCAAAGG+GGG - chr8_2:58264200-58264219 None:intergenic 60.0%
CGGCGAGTAACGAGCCAAAG+GGG - chr8_2:58264201-58264220 None:intergenic 60.0%
CCGGCGAGTAACGAGCCAAA+GGG - chr8_2:58264202-58264221 None:intergenic 60.0%
! CCCTTTGGCTCGTTACTCGC+CGG + chr8_2:58264199-58264218 Msa1257640:CDS 60.0%
TCCGGCGAGTAACGAGCCAA+AGG - chr8_2:58264203-58264222 None:intergenic 60.0%
GGCTCGTTACTCGCCGGAAA+CGG + chr8_2:58264205-58264224 Msa1257640:CDS 60.0%
TCACCTCCAGGTCAACGCTC+AGG + chr8_2:58264361-58264380 Msa1257640:CDS 60.0%
!! CATCCTGAGCGTTGACCTGG+AGG - chr8_2:58264367-58264386 None:intergenic 60.0%
GGAGCACGGGGATAGTTCAG+TGG + chr8_2:58265267-58265286 Msa1257640:CDS 60.0%
TTGGGCCATTGGGTACTCGG+TGG + chr8_2:58265441-58265460 Msa1257640:CDS 60.0%
CCTCCTCTTCCAAGCTGTGC+TGG - chr8_2:58265574-58265593 None:intergenic 60.0%
CCAGCACAGCTTGGAAGAGG+AGG + chr8_2:58265571-58265590 Msa1257640:CDS 60.0%
!! CTTGGAAGAGGAGGGGTGCT+TGG + chr8_2:58265580-58265599 Msa1257640:CDS 60.0%
!! GACGTTACCGGCGCCGATGA+CGG - chr8_2:58263907-58263926 None:intergenic 65.0%
!! GTCATCGGCGCCGGTAACGT+CGG + chr8_2:58263906-58263925 Msa1257640:CDS 65.0%
CGATGACGAGCTCGTCGGTG+AGG - chr8_2:58263965-58263984 None:intergenic 65.0%
ACCGCCGGTGCAAGGCAGAT+CGG + chr8_2:58264116-58264135 Msa1257640:CDS 65.0%
ACCGATCTGCCTTGCACCGG+CGG - chr8_2:58264120-58264139 None:intergenic 65.0%
! GCCATTGGGTACTCGGTGGC+TGG + chr8_2:58265445-58265464 Msa1257640:CDS 65.0%
GCCAGCCACCGAGTACCCAA+TGG - chr8_2:58265449-58265468 None:intergenic 65.0%
! TGGGTACTCGGTGGCTGGCT+TGG + chr8_2:58265450-58265469 Msa1257640:CDS 65.0%
!! GACGTTACCGGCGCCGATGA+CGG - chr8_2:58263907-58263926 None:intergenic 65.0%
!! GTCATCGGCGCCGGTAACGT+CGG + chr8_2:58263906-58263925 Msa1257640:CDS 65.0%
CGATGACGAGCTCGTCGGTG+AGG - chr8_2:58263965-58263984 None:intergenic 65.0%
ACCGCCGGTGCAAGGCAGAT+CGG + chr8_2:58264116-58264135 Msa1257640:CDS 65.0%
ACCGATCTGCCTTGCACCGG+CGG - chr8_2:58264120-58264139 None:intergenic 65.0%
! GCCATTGGGTACTCGGTGGC+TGG + chr8_2:58265445-58265464 Msa1257640:CDS 65.0%
GCCAGCCACCGAGTACCCAA+TGG - chr8_2:58265449-58265468 None:intergenic 65.0%
! TGGGTACTCGGTGGCTGGCT+TGG + chr8_2:58265450-58265469 Msa1257640:CDS 65.0%
GCCGGTGCAAGGCAGATCGG+TGG + chr8_2:58264119-58264138 Msa1257640:CDS 70.0%
GCCGGTGCAAGGCAGATCGG+TGG + chr8_2:58264119-58264138 Msa1257640:CDS 70.0%
!! CGGCGCCGGTAACGTCGGCA+TGG + chr8_2:58263911-58263930 Msa1257640:CDS 75.0%
!! CGGCGCCGGTAACGTCGGCA+TGG + chr8_2:58263911-58263930 Msa1257640:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 58263567 58265907 58263567 ID=Msa1257640;Name=Msa1257640
chr8_2 mRNA 58263567 58265907 58263567 ID=Msa1257640-mRNA-1;Parent=Msa1257640;Name=Msa1257640-mRNA-1;_AED=0.01;_eAED=0.01;_QI=216|1|1|1|1|1|2|211|350
chr8_2 exon 58263567 58264391 58263567 ID=Msa1257640-mRNA-1:exon:18047;Parent=Msa1257640-mRNA-1
chr8_2 exon 58265253 58265907 58265253 ID=Msa1257640-mRNA-1:exon:18048;Parent=Msa1257640-mRNA-1
chr8_2 five_prime_UTR 58263567 58263782 58263567 ID=Msa1257640-mRNA-1:five_prime_utr;Parent=Msa1257640-mRNA-1
chr8_2 CDS 58263783 58264391 58263783 ID=Msa1257640-mRNA-1:cds;Parent=Msa1257640-mRNA-1
chr8_2 CDS 58265253 58265696 58265253 ID=Msa1257640-mRNA-1:cds;Parent=Msa1257640-mRNA-1
chr8_2 three_prime_UTR 58265697 58265907 58265697 ID=Msa1257640-mRNA-1:three_prime_utr;Parent=Msa1257640-mRNA-1
Gene Sequence

>Msa1257640

ATGCACAAGAGCGGTTCTGCTTCGACGTTAGGCCCAGACGGCCTTGACTTAACCCAAGCCTTCTTCAAACCCATCTCAAACGCAGCACCACCATCACCCACAAAGCGTCACAACAAGATCTCCGTCATCGGCGCCGGTAACGTCGGCATGGCCATTGCTCAGACCATCCTAACTCAAGACCTCACCGACGAGCTCGTCATCGTCGACAACAAACCCGACAAACTCCGCGGCGAGATGCTTGATCTTCAACACGCTGCTGCTTTCCTTCCCCGTGTTAAGATCAACTCCTCCGTTGAATACTCCGTTACTGCTGGCTCCGATCTCTGTATTGTCACCGCCGGTGCAAGGCAGATCGGTGGTGAGTCTAGGCTTAATCTTCTTCAGAGGAATCTTTCTCTGTTCCAGGCAATTATACCCCCTTTGGCTCGTTACTCGCCGGAAACGGTTCTGATCATCGTGTCCAACCCCGTTGATGTTCTTACCTACATCGCATGGAAGCTTTCTGGGTTTCCTTCTAATCGGGTCATCGGGTCGGGTACCAATTTGGATTCATCTCGGTTTCGGTTCCTCATTGCTGATCACCTCCAGGTCAACGCTCAGGATGTTCAGGCATGCATAGTAGGGGAGCACGGGGATAGTTCAGTGGCATTGTGGTCTAGCATCAGCATTGGTGGTATTCCTGTCCTTAGTTTTTTGGAGAAACAACAGATTGCATATGAGAAAGAAACGCTGGAGAATATACACAAGACTGTGATAAACAGCGCATATGAAGTCATCAGTCTAAAAGGTTACACTTCTTGGGCCATTGGGTACTCGGTGGCTGGCTTGGCGCGTTCCATTATTAGGGACCAAAGGAAAATTCACCCTGTGTCTGTTTTGGCTAAGGGGTTTTATGGCATAGGTGATGTTGAAGTGTTTTTGAGCTTGCCAGCACAGCTTGGAAGAGGAGGGGTGCTTGGTATAACCAATGTGCACATGAATAATGAGGAGGAACAAAGGCTTAGGGATTCTGCTAAAACTATCTTGGAGGTCCAGACTCAGTTGGGTATTTAA
Protein sequence

>Msa1257640

MHKSGSASTLGPDGLDLTQAFFKPISNAAPPSPTKRHNKISVIGAGNVGMAIAQTILTQDLTDELVIVDNKPDKLRGEMLDLQHAAAFLPRVKINSSVEYSVTAGSDLCIVTAGARQIGGESRLNLLQRNLSLFQAIIPPLARYSPETVLIIVSNPVDVLTYIAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLQVNAQDVQACIVGEHGDSSVALWSSISIGGIPVLSFLEKQQIAYEKETLENIHKTVINSAYEVISLKGYTSWAIGYSVAGLARSIIRDQRKIHPVSVLAKGFYGIGDVEVFLSLPAQLGRGGVLGITNVHMNNEEEQRLRDSAKTILEVQTQLGI*