AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1308330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308330 MtrunA17_Chr8g0334891 98.978 489 5 0 1 489 1 489 0.0 1002
Msa1308330 MtrunA17_Chr8g0334941 99.099 333 3 0 157 489 2 334 0.0 689
Msa1308330 MtrunA17_Chr1g0153371 26.327 471 302 18 13 461 9 456 2.82e-33 131
Msa1308330 MtrunA17_Chr7g0246221 26.176 489 315 15 12 466 5 481 3.75e-29 120
Msa1308330 MtrunA17_Chr8g0369791 24.477 478 309 18 25 483 22 466 1.88e-28 117
Msa1308330 MtrunA17_Chr2g0293421 23.025 443 298 11 38 459 45 465 3.49e-28 117
Msa1308330 MtrunA17_Chr7g0265611 23.881 469 304 11 25 456 33 485 3.36e-27 114
Msa1308330 MtrunA17_Chr2g0293411 22.727 440 306 10 38 459 41 464 9.95e-27 112
Msa1308330 MtrunA17_Chr3g0107501 25.676 444 289 14 31 453 25 448 1.93e-26 112
Msa1308330 MtrunA17_Chr5g0408181 25.974 462 287 17 9 452 9 433 3.24e-26 111
Msa1308330 MtrunA17_Chr4g0044851 24.835 455 285 16 34 461 33 457 1.81e-24 105
Msa1308330 MtrunA17_Chr8g0380471 24.183 459 308 11 30 469 26 463 2.25e-24 105
Msa1308330 MtrunA17_Chr1g0198191 22.938 497 323 18 13 467 18 496 1.26e-23 103
Msa1308330 MtrunA17_Chr7g0246151 26.778 478 307 14 12 457 5 471 1.63e-23 103
Msa1308330 MtrunA17_Chr8g0388921 24.678 466 320 14 9 459 5 454 2.33e-23 102
Msa1308330 MtrunA17_Chr4g0044841 25.383 457 281 15 34 461 34 459 5.65e-23 101
Msa1308330 MtrunA17_Chr2g0310391 23.778 450 300 14 36 456 26 461 1.47e-22 100
Msa1308330 MtrunA17_Chr7g0246131 26.518 494 308 12 12 466 5 482 2.30e-22 100
Msa1308330 MtrunA17_Chr3g0089361 23.482 494 336 15 9 482 5 476 4.96e-22 99.0
Msa1308330 MtrunA17_Chr4g0035921 24.380 484 315 13 11 456 11 481 7.37e-22 98.6
Msa1308330 MtrunA17_Chr2g0288661 25.143 350 224 12 133 456 154 491 1.01e-21 98.2
Msa1308330 MtrunA17_Chr2g0310381 24.499 449 298 15 36 456 26 461 1.29e-21 97.8
Msa1308330 MtrunA17_Chr6g0455461 23.462 439 292 13 35 457 30 440 1.33e-21 97.4
Msa1308330 MtrunA17_Chr2g0307301 24.438 356 227 10 133 460 154 495 1.86e-21 97.4
Msa1308330 MtrunA17_Chr8g0361471 23.109 476 329 13 8 456 4 469 2.98e-21 96.7
Msa1308330 MtrunA17_Chr2g0307291 24.438 356 227 10 133 460 154 495 3.10e-21 96.7
Msa1308330 MtrunA17_Chr5g0395321 26.237 465 306 16 13 456 17 465 4.25e-21 96.3
Msa1308330 MtrunA17_Chr3g0101731 22.432 477 322 18 9 456 12 469 6.33e-21 95.5
Msa1308330 MtrunA17_Chr6g0465511 23.319 476 328 13 8 456 4 469 6.39e-21 95.5
Msa1308330 MtrunA17_Chr0c19g0493771 23.791 517 324 17 21 482 147 648 7.16e-21 96.3
Msa1308330 MtrunA17_Chr3g0141801 23.529 493 331 15 9 479 12 480 9.27e-21 95.1
Msa1308330 MtrunA17_Chr8g0381541 22.449 441 306 12 38 459 43 466 9.92e-21 95.1
Msa1308330 MtrunA17_Chr5g0443401 21.973 446 305 13 33 459 33 454 1.01e-20 94.7
Msa1308330 MtrunA17_Chr1g0164211 25.319 470 301 15 28 466 22 472 1.03e-20 95.1
Msa1308330 MtrunA17_Chr3g0101671 25.330 454 294 15 34 456 34 473 1.20e-20 94.7
Msa1308330 MtrunA17_Chr6g0466331 23.319 476 328 13 8 456 4 469 1.22e-20 94.7
Msa1308330 MtrunA17_Chr4g0058281 22.479 476 322 15 12 456 22 481 2.12e-20 94.0
Msa1308330 MtrunA17_Chr8g0372711 24.064 374 260 8 70 437 84 439 2.29e-20 94.0
Msa1308330 MtrunA17_Chr5g0446161 25.333 450 295 16 34 458 37 470 3.03e-20 93.6
Msa1308330 MtrunA17_Chr4g0011901 24.070 457 298 16 33 456 24 464 4.07e-20 93.2
Msa1308330 MtrunA17_Chr3g0101611 22.889 450 310 13 34 457 34 472 4.60e-20 93.2
Msa1308330 MtrunA17_Chr5g0443731 23.182 440 309 12 33 458 24 448 5.24e-20 92.8
Msa1308330 MtrunA17_Chr2g0313821 22.513 382 256 12 105 456 118 489 5.36e-20 92.8
Msa1308330 MtrunA17_Chr3g0107511 22.246 472 317 13 13 459 8 454 1.04e-19 91.7
Msa1308330 MtrunA17_Chr2g0313781 24.625 333 209 11 152 456 183 501 1.27e-19 91.7
Msa1308330 MtrunA17_Chr7g0218601 23.045 486 321 16 34 487 30 494 1.40e-19 91.7
Msa1308330 MtrunA17_Chr4g0011961 24.160 476 318 16 10 456 2 463 1.48e-19 91.3
Msa1308330 MtrunA17_Chr1g0162811 27.542 236 150 7 233 456 242 468 1.79e-19 91.3
Msa1308330 MtrunA17_Chr3g0101701 23.368 475 317 16 14 456 14 473 1.88e-19 91.3
Msa1308330 MtrunA17_Chr5g0445421 22.917 480 310 13 7 465 79 519 1.89e-19 91.3
Msa1308330 MtrunA17_Chr3g0101821 25.000 484 304 20 9 458 13 471 3.57e-19 90.1
Msa1308330 MtrunA17_Chr3g0086691 26.049 453 273 14 47 456 41 474 4.58e-19 90.1
Msa1308330 MtrunA17_Chr7g0218611 23.340 467 291 16 31 455 26 467 5.01e-19 89.7
Msa1308330 MtrunA17_Chr8g0354531 24.000 350 226 12 133 456 283 618 5.05e-19 90.1
Msa1308330 MtrunA17_Chr3g0101661 23.044 473 320 15 14 456 14 472 1.08e-18 89.0
Msa1308330 MtrunA17_Chr8g0356001 23.868 486 328 15 1 456 1 474 1.38e-18 88.6
Msa1308330 MtrunA17_Chr2g0314731 27.311 238 160 5 233 464 243 473 1.44e-18 88.2
Msa1308330 MtrunA17_Chr8g0381571 22.120 434 302 12 38 452 43 459 1.71e-18 88.2
Msa1308330 MtrunA17_Chr4g0076161 24.439 446 301 13 37 456 36 471 1.76e-18 88.2
Msa1308330 MtrunA17_Chr4g0004601 23.577 369 247 13 113 460 154 508 2.57e-18 87.8
Msa1308330 MtrunA17_Chr3g0101721 28.629 248 133 10 237 465 247 469 4.19e-18 87.0
Msa1308330 MtrunA17_Chr6g0463801 23.516 455 290 13 38 458 37 467 4.95e-18 86.7
Msa1308330 MtrunA17_Chr2g0313791 25.397 252 165 7 219 456 242 484 5.17e-18 86.7
Msa1308330 MtrunA17_Chr2g0313761 23.429 350 232 11 130 460 156 488 5.21e-18 86.7
Msa1308330 MtrunA17_Chr3g0116741 23.529 476 318 17 12 457 25 484 5.59e-18 86.7
Msa1308330 MtrunA17_Chr5g0431511 24.082 490 307 20 38 487 33 497 5.67e-18 86.7
Msa1308330 MtrunA17_Chr5g0445381 23.251 486 315 15 7 456 36 499 6.11e-18 86.7
Msa1308330 MtrunA17_Chr2g0313831 22.334 497 315 19 13 456 11 489 7.31e-18 86.3
Msa1308330 MtrunA17_Chr5g0397971 21.875 448 317 12 16 449 9 437 7.67e-18 86.3
Msa1308330 MtrunA17_Chr4g0074581 24.070 457 293 18 36 452 67 509 8.46e-18 86.3
Msa1308330 MtrunA17_Chr5g0445531 24.270 445 296 14 38 456 38 467 9.46e-18 85.9
Msa1308330 MtrunA17_Chr3g0101711 23.701 481 316 19 10 456 9 472 9.78e-18 85.9
Msa1308330 MtrunA17_Chr3g0101631 23.651 482 309 18 9 456 8 464 1.10e-17 85.5
Msa1308330 MtrunA17_Chr2g0313751 23.011 352 229 11 133 456 179 516 1.14e-17 85.9
Msa1308330 MtrunA17_Chr1g0174461 22.904 489 316 16 9 456 7 475 1.37e-17 85.5
Msa1308330 MtrunA17_Chr2g0296651 26.923 234 158 5 226 458 242 463 1.66e-17 85.1
Msa1308330 MtrunA17_Chr2g0313801 22.021 386 253 12 105 456 118 489 2.12e-17 84.7
Msa1308330 MtrunA17_Chr6g0463791 24.788 472 314 18 20 464 18 475 2.19e-17 84.7
Msa1308330 MtrunA17_Chr3g0101801 23.992 496 318 17 4 458 1 478 2.86e-17 84.3
Msa1308330 MtrunA17_Chr5g0395331 28.340 247 162 7 234 472 251 490 2.96e-17 84.3
Msa1308330 MtrunA17_Chr4g0058231 24.008 479 319 15 13 456 1 469 3.02e-17 84.3
Msa1308330 MtrunA17_Chr4g0020041 22.756 479 323 16 9 456 8 470 3.29e-17 84.3
Msa1308330 MtrunA17_Chr5g0401691 23.881 469 314 16 11 453 24 475 4.33e-17 84.0
Msa1308330 MtrunA17_Chr4g0057001 25.109 458 293 15 29 453 41 481 6.64e-17 83.2
Msa1308330 MtrunA17_Chr3g0101601 23.690 477 316 14 9 456 8 465 8.89e-17 82.8
Msa1308330 MtrunA17_Chr5g0405001 22.131 488 332 11 1 456 10 481 9.96e-17 82.8
Msa1308330 MtrunA17_Chr1g0207841 27.957 186 128 3 272 457 304 483 1.01e-16 82.8
Msa1308330 MtrunA17_Chr4g0046321 22.817 355 220 10 139 463 151 481 1.10e-16 82.8
Msa1308330 MtrunA17_Chr3g0086651 31.624 234 144 7 233 456 247 474 1.21e-16 82.4
Msa1308330 MtrunA17_Chr5g0403351 23.179 453 309 16 33 456 29 471 1.24e-16 82.4
Msa1308330 MtrunA17_Chr3g0089351 22.647 340 231 11 134 463 59 376 1.27e-16 81.6
Msa1308330 MtrunA17_Chr5g0445451 22.869 481 323 16 7 456 5 468 1.29e-16 82.4
Msa1308330 MtrunA17_Chr1g0174441 22.881 472 310 18 14 448 32 486 1.49e-16 82.4
Msa1308330 MtrunA17_Chr3g0116681 22.151 465 332 12 15 456 14 471 1.58e-16 82.0
Msa1308330 MtrunA17_Chr5g0400421 22.273 440 311 11 36 459 43 467 1.71e-16 82.0
Msa1308330 MtrunA17_Chr2g0286091 30.952 168 108 5 271 437 293 453 1.81e-16 82.0
Msa1308330 MtrunA17_Chr3g0101621 22.947 475 322 15 10 456 1 459 1.91e-16 81.6
Msa1308330 MtrunA17_Chr5g0396521 25.200 250 159 6 230 456 298 542 2.04e-16 82.0
Msa1308330 MtrunA17_Chr5g0431501 22.768 448 307 14 38 456 33 470 3.14e-16 81.3
Msa1308330 MtrunA17_Chr5g0431461 22.768 448 307 14 38 456 33 470 3.14e-16 81.3
Msa1308330 MtrunA17_Chr2g0314721 26.522 230 156 5 233 456 254 476 3.31e-16 81.3
Msa1308330 MtrunA17_Chr3g0094171 24.000 475 312 16 16 456 18 477 4.06e-16 80.9
Msa1308330 MtrunA17_Chr5g0403321 23.593 462 307 15 37 464 33 482 4.08e-16 80.9
Msa1308330 MtrunA17_Chr4g0056951 30.769 208 130 7 238 437 259 460 4.53e-16 80.9
Msa1308330 MtrunA17_Chr3g0086661 31.624 234 144 7 233 456 247 474 5.76e-16 80.5
Msa1308330 MtrunA17_Chr8g0357421 24.845 483 297 21 12 456 15 469 6.20e-16 80.1
Msa1308330 MtrunA17_Chr4g0030701 30.159 189 123 5 272 457 299 481 6.29e-16 80.5
Msa1308330 MtrunA17_Chr4g0046631 24.335 489 325 18 3 454 6 486 6.40e-16 80.5
Msa1308330 MtrunA17_Chr7g0258211 28.205 234 150 7 234 456 254 480 8.01e-16 80.1
Msa1308330 MtrunA17_Chr4g0030711 27.513 189 128 4 272 457 302 484 8.98e-16 79.7
Msa1308330 MtrunA17_Chr4g0046331 22.500 360 227 11 138 463 142 483 9.15e-16 79.7
Msa1308330 MtrunA17_Chr8g0354511 24.277 346 231 11 133 456 161 497 1.11e-15 79.7
Msa1308330 MtrunA17_Chr5g0401681 23.755 261 184 5 226 483 242 490 1.16e-15 79.3
Msa1308330 MtrunA17_Chr4g0061381 23.829 491 319 14 10 459 1 477 1.20e-15 79.3
Msa1308330 MtrunA17_Chr3g0101761 24.051 474 313 19 13 458 17 471 1.37e-15 79.3
Msa1308330 MtrunA17_Chr5g0445461 22.526 475 332 15 7 456 5 468 1.73e-15 79.0
Msa1308330 MtrunA17_Chr5g0445441 21.901 484 324 15 7 456 46 509 1.74e-15 79.0
Msa1308330 MtrunA17_Chr4g0046351 23.184 358 225 11 138 463 142 481 1.75e-15 79.0
Msa1308330 MtrunA17_Chr3g0101651 26.860 242 159 7 227 456 238 473 1.88e-15 79.0
Msa1308330 MtrunA17_Chr6g0458561 32.039 206 128 7 254 456 301 497 1.94e-15 79.0
Msa1308330 MtrunA17_Chr8g0354571 24.847 326 217 9 148 456 183 497 1.97e-15 79.0
Msa1308330 MtrunA17_Chr2g0313811 24.603 252 167 7 219 456 259 501 2.16e-15 78.6
Msa1308330 MtrunA17_Chr2g0310351 28.409 176 114 5 284 456 2 168 2.32e-15 74.7
Msa1308330 MtrunA17_Chr4g0011921 23.044 473 325 13 12 456 3 464 2.39e-15 78.6
Msa1308330 MtrunA17_Chr3g0101691 22.594 478 317 18 14 456 14 473 2.57e-15 78.2
Msa1308330 MtrunA17_Chr4g0011981 27.197 239 160 6 225 456 233 464 3.24e-15 78.2
Msa1308330 MtrunA17_Chr1g0164371 23.389 419 275 13 36 437 42 431 3.37e-15 77.8
Msa1308330 MtrunA17_Chr5g0446131 22.159 352 232 10 133 456 150 487 4.37e-15 77.8
Msa1308330 MtrunA17_Chr4g0058191 25.714 315 199 10 165 456 156 458 6.88e-15 77.0
Msa1308330 MtrunA17_Chr7g0255531 26.636 214 147 5 242 452 254 460 8.50e-15 76.6
Msa1308330 MtrunA17_Chr1g0203151 23.098 368 245 13 113 459 136 486 8.64e-15 76.6
Msa1308330 MtrunA17_Chr8g0351801 25.000 220 146 5 249 456 274 486 9.29e-15 76.6
Msa1308330 MtrunA17_Chr4g0047631 22.634 486 337 14 8 464 13 488 9.45e-15 76.6
Msa1308330 MtrunA17_Chr8g0339331 31.609 174 113 3 284 456 316 484 1.28e-14 76.3
Msa1308330 MtrunA17_Chr6g0457421 23.387 372 246 12 131 481 152 505 1.43e-14 75.9
Msa1308330 MtrunA17_Chr4g0058201 21.875 448 310 14 36 456 26 460 1.87e-14 75.5
Msa1308330 MtrunA17_Chr7g0246181 26.261 476 310 14 12 456 5 470 1.94e-14 75.5
Msa1308330 MtrunA17_Chr4g0011941 29.480 173 116 3 284 456 2 168 2.51e-14 71.6
Msa1308330 MtrunA17_Chr2g0314781 29.114 158 104 4 300 456 2 152 3.06e-14 70.9
Msa1308330 MtrunA17_Chr6g0472221 23.352 364 246 13 113 456 149 499 4.32e-14 74.7
Msa1308330 MtrunA17_Chr5g0446101 28.634 227 148 7 238 460 67 283 4.57e-14 73.2
Msa1308330 MtrunA17_Chr3g0101751 23.226 465 312 16 28 458 25 478 4.88e-14 74.3
Msa1308330 MtrunA17_Chr4g0039901 22.069 435 291 12 30 433 27 444 5.31e-14 74.3
Msa1308330 MtrunA17_Chr4g0039391 25.726 241 166 6 230 466 248 479 5.56e-14 74.3
Msa1308330 MtrunA17_Chr8g0372251 22.664 428 285 11 39 433 36 450 5.78e-14 74.3
Msa1308330 MtrunA17_Chr6g0472311 24.797 492 310 18 9 458 13 486 5.78e-14 74.3
Msa1308330 MtrunA17_Chr5g0419691 22.940 449 305 15 37 456 28 464 6.39e-14 73.9
Msa1308330 MtrunA17_Chr6g0451741 22.708 480 305 17 34 462 55 519 7.33e-14 73.9
Msa1308330 MtrunA17_Chr1g0200961 23.739 476 324 14 13 459 6 471 9.65e-14 73.6
Msa1308330 MtrunA17_Chr4g0014051 22.115 416 281 13 72 456 98 501 1.52e-13 72.8
Msa1308330 MtrunA17_Chr3g0101831 24.561 513 316 21 12 489 15 491 2.09e-13 72.4
Msa1308330 MtrunA17_Chr6g0451641 23.261 460 305 17 34 454 34 484 2.24e-13 72.4
Msa1308330 MtrunA17_Chr8g0351401 24.498 249 149 9 242 468 263 494 2.87e-13 72.0
Msa1308330 MtrunA17_Chr6g0478161 21.053 456 333 10 12 452 18 461 3.20e-13 71.6
Msa1308330 MtrunA17_Chr8g0355961 21.739 483 317 14 15 456 12 474 3.38e-13 71.6
Msa1308330 MtrunA17_Chr1g0204271 24.783 230 156 6 238 457 257 479 3.68e-13 71.6
Msa1308330 MtrunA17_Chr6g0451691 23.313 489 294 19 34 463 36 502 5.84e-13 71.2
Msa1308330 MtrunA17_Chr1g0205361 25.197 254 172 7 213 456 220 465 6.02e-13 70.9
Msa1308330 MtrunA17_Chr8g0357431 24.152 501 305 22 12 475 15 477 6.89e-13 70.9
Msa1308330 MtrunA17_Chr8g0344191 22.110 493 329 15 11 466 42 516 7.16e-13 70.9
Msa1308330 MtrunA17_Chr4g0038271 23.711 291 183 9 220 484 284 561 1.08e-12 70.5
Msa1308330 MtrunA17_Chr7g0226771 23.395 483 296 15 8 456 3 445 1.16e-12 70.1
Msa1308330 MtrunA17_Chr5g0400411 22.757 457 287 15 36 459 43 466 1.24e-12 70.1
Msa1308330 MtrunA17_Chr8g0362731 23.262 374 242 14 113 460 31 385 1.29e-12 69.3
Msa1308330 MtrunA17_Chr1g0174481 21.008 476 320 16 8 448 5 459 1.51e-12 69.7
Msa1308330 MtrunA17_Chr7g0215181 23.145 337 226 11 138 456 161 482 1.83e-12 69.3
Msa1308330 MtrunA17_Chr4g0017411 25.272 368 228 14 119 472 130 464 1.97e-12 69.3
Msa1308330 MtrunA17_Chr6g0466941 23.251 486 320 19 35 476 30 506 2.15e-12 69.3
Msa1308330 MtrunA17_Chr8g0390881 23.651 482 327 18 9 458 2 474 2.24e-12 69.3
Msa1308330 MtrunA17_Chr6g0484811 21.849 476 326 16 13 456 12 473 2.31e-12 68.9
Msa1308330 MtrunA17_Chr2g0334021 22.560 461 294 15 37 456 32 470 2.32e-12 68.9
Msa1308330 MtrunA17_Chr6g0479681 22.299 435 267 17 76 459 90 504 2.68e-12 68.9
Msa1308330 MtrunA17_Chr8g0346261 23.874 222 162 4 234 453 296 512 3.98e-12 68.6
Msa1308330 MtrunA17_Chr1g0200951 25.269 186 129 4 273 453 316 496 5.46e-12 68.2
Msa1308330 MtrunA17_Chr1g0162801 25.210 238 156 6 233 456 242 471 5.89e-12 67.8
Msa1308330 MtrunA17_Chr3g0116731 33.621 116 66 3 335 449 1 106 7.32e-12 63.2
Msa1308330 MtrunA17_Chr5g0406651 23.371 445 306 14 38 456 30 465 2.38e-11 65.9
Msa1308330 MtrunA17_Chr2g0304871 22.998 487 318 20 13 454 8 482 3.11e-11 65.5
Msa1308330 MtrunA17_Chr7g0260831 24.514 257 168 8 211 454 228 471 3.30e-11 65.5
Msa1308330 MtrunA17_Chr5g0419451 25.101 247 166 8 216 453 249 485 3.34e-11 65.5
Msa1308330 MtrunA17_Chr4g0053621 26.289 194 129 6 272 464 292 472 3.83e-11 65.1
Msa1308330 MtrunA17_Chr7g0225531 23.904 251 168 8 219 458 248 486 4.69e-11 65.1
Msa1308330 MtrunA17_Chr5g0402981 27.811 169 113 5 293 459 2 163 6.07e-11 62.0
Msa1308330 MtrunA17_Chr8g0351391 23.431 239 159 7 243 469 270 496 6.31e-11 64.7
Msa1308330 MtrunA17_Chr1g0167321 26.639 244 154 6 225 456 238 468 8.83e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308330 AT1G11680.1 82.172 488 85 2 1 486 1 488 0.0 841
Msa1308330 AT5G45340.1 25.690 471 310 14 13 474 15 454 2.34e-31 126
Msa1308330 AT3G19270.2 26.458 480 289 18 14 461 6 453 3.04e-31 126
Msa1308330 AT3G19270.1 26.350 463 285 17 14 452 6 436 2.60e-30 123
Msa1308330 AT5G45340.2 26.164 451 293 14 13 454 15 434 3.00e-30 122
Msa1308330 AT4G19230.1 25.052 479 309 17 25 487 23 467 6.18e-29 119
Msa1308330 AT2G32440.2 24.385 447 297 11 33 459 39 464 2.26e-28 118
Msa1308330 AT2G32440.1 24.385 447 297 11 33 459 39 464 2.26e-28 118
Msa1308330 AT4G19230.2 25.792 442 282 16 25 452 23 432 3.99e-27 114
Msa1308330 AT3G61040.1 31.273 275 167 9 196 455 196 463 3.78e-25 108
Msa1308330 AT3G10560.1 24.458 507 325 17 1 470 11 496 5.60e-25 108
Msa1308330 AT1G78490.1 22.449 441 310 10 32 457 29 452 2.05e-24 106
Msa1308330 AT1G05160.2 25.275 455 285 16 33 459 40 467 7.89e-24 104
Msa1308330 AT1G05160.1 25.275 455 285 16 33 459 40 467 7.89e-24 104
Msa1308330 AT2G29090.2 24.670 454 299 12 37 474 48 474 1.64e-23 103
Msa1308330 AT2G29090.1 24.670 454 299 12 37 474 48 474 1.64e-23 103
Msa1308330 AT2G34490.1 25.813 461 299 18 3 437 2 445 1.78e-21 97.8
Msa1308330 AT5G07990.1 23.958 480 318 11 12 458 7 472 2.73e-21 97.4
Msa1308330 AT5G04630.1 24.717 530 329 22 1 483 2 508 4.46e-21 96.7
Msa1308330 AT1G55940.2 23.312 459 290 14 32 457 39 468 6.69e-21 95.9
Msa1308330 AT2G28850.1 25.349 430 272 18 35 437 34 441 6.76e-21 95.9
Msa1308330 AT1G11600.1 23.632 457 294 18 38 453 35 477 8.94e-21 95.5
Msa1308330 AT3G14680.1 24.931 361 241 12 115 456 136 485 1.15e-20 95.5
Msa1308330 AT2G34500.1 24.891 458 302 16 3 437 2 440 1.29e-20 95.1
Msa1308330 AT5G04660.1 31.461 267 155 10 219 465 232 490 1.75e-20 94.7
Msa1308330 AT2G28860.1 25.175 429 274 17 35 437 34 441 1.81e-20 94.7
Msa1308330 AT1G55940.1 23.568 454 285 14 32 452 39 463 1.84e-20 94.4
Msa1308330 AT2G25160.1 23.904 502 299 20 9 454 7 481 1.92e-20 94.7
Msa1308330 AT3G14690.1 24.425 348 229 12 133 459 153 487 2.25e-20 94.4
Msa1308330 AT3G14690.2 24.425 348 229 12 133 459 188 522 2.29e-20 94.7
Msa1308330 AT5G48000.2 22.197 446 303 13 32 456 29 451 3.12e-20 94.0
Msa1308330 AT5G48000.4 22.197 446 303 13 32 456 29 451 3.12e-20 94.0
Msa1308330 AT5G48000.7 22.197 446 303 13 32 456 29 451 3.12e-20 94.0
Msa1308330 AT5G48000.6 22.197 446 303 13 32 456 29 451 3.12e-20 94.0
Msa1308330 AT5G48000.5 22.197 446 303 13 32 456 29 451 3.12e-20 94.0
Msa1308330 AT5G48000.3 22.197 446 303 13 32 456 29 451 3.12e-20 94.0
Msa1308330 AT1G12740.1 22.976 457 322 13 13 455 4 444 3.62e-20 93.6
Msa1308330 AT5G48000.1 22.197 446 303 13 32 456 70 492 4.67e-20 93.6
Msa1308330 AT3G44970.1 24.632 475 308 14 7 456 2 451 5.75e-20 92.8
Msa1308330 AT3G14660.1 23.955 359 238 12 119 456 141 485 1.04e-19 92.4
Msa1308330 AT3G26280.2 24.524 473 312 15 25 464 36 496 1.07e-19 92.4
Msa1308330 AT3G26280.1 24.900 498 315 17 25 489 19 490 1.10e-19 92.4
Msa1308330 AT1G33730.1 29.596 223 146 6 236 456 126 339 1.17e-19 90.9
Msa1308330 AT1G33730.2 29.596 223 146 6 236 456 126 339 1.17e-19 90.9
Msa1308330 AT3G20110.1 25.056 443 291 14 39 456 43 469 2.06e-19 91.7
Msa1308330 AT2G29090.3 25.634 355 232 10 128 474 49 379 2.24e-19 90.5
Msa1308330 AT3G10570.1 26.591 440 266 18 57 465 78 491 2.61e-19 91.3
Msa1308330 AT5G25180.1 23.965 459 291 18 34 456 25 461 2.70e-19 90.9
Msa1308330 AT1G12740.4 22.319 457 331 12 13 455 4 450 3.88e-19 90.5
Msa1308330 AT3G14660.2 24.149 323 219 10 148 456 29 339 3.91e-19 89.4
Msa1308330 AT3G14640.1 23.547 344 234 10 133 456 153 487 3.93e-19 90.5
Msa1308330 AT3G14640.2 23.547 344 234 10 133 456 175 509 4.16e-19 90.5
Msa1308330 AT3G26270.1 24.307 469 285 15 33 456 27 470 5.18e-19 90.1
Msa1308330 AT1G78490.2 22.137 393 275 9 32 408 29 406 1.22e-18 88.6
Msa1308330 AT3G14650.1 23.478 345 231 10 133 456 153 485 1.53e-18 89.0
Msa1308330 AT3G26160.1 22.907 454 310 13 10 433 3 446 1.60e-18 88.6
Msa1308330 AT1G33720.4 29.439 214 144 4 244 456 136 343 2.79e-18 87.0
Msa1308330 AT1G33720.3 29.439 214 144 4 244 456 136 343 2.79e-18 87.0
Msa1308330 AT1G33720.5 29.439 214 144 4 244 456 136 343 2.79e-18 87.0
Msa1308330 AT1G19630.1 23.028 469 320 13 33 483 30 475 3.68e-18 87.4
Msa1308330 AT1G12740.2 22.294 462 325 13 13 455 4 450 3.92e-18 87.4
Msa1308330 AT3G14620.1 23.096 407 279 12 74 456 92 488 4.46e-18 87.4
Msa1308330 AT5G04330.1 25.514 243 163 3 227 456 235 472 4.71e-18 87.4
Msa1308330 AT1G13110.1 23.690 477 312 15 13 453 8 468 6.92e-18 86.7
Msa1308330 AT5G36220.1 24.390 492 297 19 10 457 6 466 7.58e-18 86.7
Msa1308330 AT5G25120.1 21.915 470 319 14 20 456 7 461 7.76e-18 86.7
Msa1308330 AT1G33720.1 29.439 214 144 4 244 456 268 475 7.96e-18 86.7
Msa1308330 AT3G26180.1 25.000 240 165 6 225 456 237 469 3.54e-17 84.7
Msa1308330 AT5G38970.1 21.930 456 317 12 13 455 10 439 3.55e-17 84.3
Msa1308330 AT4G37330.1 23.617 470 314 16 15 457 6 457 4.28e-17 84.3
Msa1308330 AT5G06905.1 22.133 497 297 18 16 452 9 475 5.23e-17 84.0
Msa1308330 AT2G40890.1 28.261 230 146 8 227 452 245 459 6.40e-17 84.0
Msa1308330 AT3G20090.1 25.794 252 168 8 216 456 99 342 6.77e-17 82.8
Msa1308330 AT2G45560.1 22.887 485 335 13 1 456 1 475 7.41e-17 83.6
Msa1308330 AT3G14630.1 24.611 321 216 10 150 456 173 481 8.29e-17 83.6
Msa1308330 AT3G26170.1 23.554 484 315 18 9 456 5 469 9.91e-17 83.2
Msa1308330 AT3G14630.2 24.611 321 216 10 150 456 228 536 1.39e-16 82.8
Msa1308330 AT4G37430.1 23.750 480 310 19 13 457 6 464 1.48e-16 82.8
Msa1308330 AT3G20090.2 25.794 252 168 8 216 456 237 480 1.64e-16 82.4
Msa1308330 AT3G20120.2 26.512 215 144 6 246 453 132 339 2.31e-16 81.3
Msa1308330 AT3G20120.3 26.512 215 144 6 246 453 132 339 2.31e-16 81.3
Msa1308330 AT3G20120.1 26.512 215 144 6 246 453 132 339 2.31e-16 81.3
Msa1308330 AT3G20120.4 26.512 215 144 6 246 453 268 475 2.42e-16 82.0
Msa1308330 AT2G45580.2 26.009 223 156 4 234 456 109 322 2.85e-16 80.9
Msa1308330 AT2G42850.1 23.226 310 206 8 160 459 173 460 3.16e-16 81.6
Msa1308330 AT3G20130.1 25.571 219 150 5 242 453 264 476 3.28e-16 81.6
Msa1308330 AT3G26180.2 25.000 232 159 6 233 456 111 335 4.01e-16 80.5
Msa1308330 AT3G20130.2 25.571 219 150 5 242 453 236 448 4.39e-16 81.3
Msa1308330 AT4G37340.1 22.984 496 323 20 16 477 6 476 5.27e-16 80.9
Msa1308330 AT3G26150.1 22.271 458 308 12 10 433 3 446 5.55e-16 80.9
Msa1308330 AT3G20140.1 27.027 185 129 2 272 456 297 475 5.83e-16 80.9
Msa1308330 AT4G15330.1 27.619 210 132 6 254 456 277 473 6.37e-16 80.9
Msa1308330 AT4G15330.2 27.619 210 132 6 254 456 249 445 6.69e-16 80.5
Msa1308330 AT1G13080.1 22.574 505 320 16 12 475 2 476 6.93e-16 80.5
Msa1308330 AT4G37410.1 23.126 467 308 18 29 464 21 467 7.90e-16 80.5
Msa1308330 AT1G13080.2 23.735 257 172 7 225 475 120 358 8.49e-16 79.7
Msa1308330 AT2G45580.1 26.009 223 156 4 234 456 263 476 1.04e-15 80.1
Msa1308330 AT3G20100.1 24.645 211 145 5 250 453 273 476 1.18e-15 79.7
Msa1308330 AT4G31500.1 22.869 481 317 17 13 456 3 466 1.25e-15 79.7
Msa1308330 AT5G09970.1 26.337 243 164 6 219 453 268 503 1.33e-15 79.7
Msa1308330 AT3G26230.1 26.829 205 142 4 254 456 269 467 1.40e-15 79.7
Msa1308330 AT2G45550.1 22.222 495 326 14 1 456 1 475 1.40e-15 79.7
Msa1308330 AT4G37400.1 25.431 232 159 5 233 458 239 462 1.64e-15 79.3
Msa1308330 AT1G74550.1 28.708 209 141 4 258 464 256 458 1.88e-15 79.0
Msa1308330 AT3G26300.1 23.173 479 323 16 7 456 3 465 2.53e-15 79.0
Msa1308330 AT5G36220.2 25.532 235 156 6 229 457 99 320 2.87e-15 77.8
Msa1308330 AT3G20950.1 28.141 199 127 5 249 441 280 468 2.96e-15 78.6
Msa1308330 AT5G25140.1 23.261 460 295 16 33 456 24 461 3.15e-15 78.6
Msa1308330 AT5G35715.1 25.463 216 148 4 225 433 172 381 3.34e-15 78.2
Msa1308330 AT5G05260.2 26.761 213 149 5 242 452 281 488 3.37e-15 78.6
Msa1308330 AT1G31800.1 23.129 441 276 17 62 463 132 548 3.73e-15 78.6
Msa1308330 AT1G79370.1 23.269 520 311 20 1 453 1 499 4.07e-15 78.2
Msa1308330 AT1G13090.2 24.424 434 279 16 34 433 24 442 4.42e-15 78.2
Msa1308330 AT3G25180.1 29.947 187 123 4 276 461 303 482 4.65e-15 78.2
Msa1308330 AT3G01900.1 21.995 391 265 11 120 484 115 491 4.87e-15 77.8
Msa1308330 AT5G52400.1 24.110 365 242 14 113 459 147 494 5.13e-15 77.8
Msa1308330 AT3G14610.1 22.384 344 237 10 133 456 152 485 6.08e-15 77.8
Msa1308330 AT5G42580.1 28.342 187 122 4 272 453 282 461 6.36e-15 77.4
Msa1308330 AT3G20935.1 28.144 167 110 3 279 441 130 290 7.15e-15 76.3
Msa1308330 AT2G27000.1 28.230 209 134 6 254 456 279 477 7.83e-15 77.4
Msa1308330 AT2G26170.2 24.912 285 189 9 212 483 166 438 8.76e-15 76.6
Msa1308330 AT2G14100.1 26.829 246 165 8 216 453 237 475 1.09e-14 77.0
Msa1308330 AT2G26170.1 25.556 270 176 9 227 483 264 521 1.19e-14 76.6
Msa1308330 AT4G12300.1 26.168 214 150 3 246 456 271 479 1.24e-14 76.6
Msa1308330 AT3G32047.1 24.424 217 152 5 242 453 264 473 1.56e-14 76.3
Msa1308330 AT1G66540.2 24.895 237 162 6 225 458 66 289 1.61e-14 75.1
Msa1308330 AT3G20940.1 21.834 458 304 15 33 453 37 477 1.91e-14 76.3
Msa1308330 AT3G52970.1 22.594 478 334 14 11 456 8 481 2.12e-14 75.9
Msa1308330 AT1G33720.2 29.240 171 115 3 286 456 204 368 2.30e-14 75.5
Msa1308330 AT3G26210.1 25.000 204 145 4 255 456 271 468 3.22e-14 75.5
Msa1308330 AT1G66540.1 25.106 235 160 6 226 457 126 347 3.41e-14 74.7
Msa1308330 AT2G45570.1 26.786 224 153 5 234 456 263 476 3.77e-14 75.1
Msa1308330 AT5G25130.1 22.176 478 314 15 15 456 6 461 6.40e-14 74.3
Msa1308330 AT4G37370.1 25.778 225 150 6 234 455 247 457 8.51e-14 73.9
Msa1308330 AT4G36220.1 27.807 187 125 3 272 456 305 483 1.11e-13 73.6
Msa1308330 AT3G52970.2 22.561 492 331 14 11 456 8 495 1.33e-13 73.6
Msa1308330 AT3G26830.1 22.689 238 172 4 225 456 234 465 1.39e-13 73.2
Msa1308330 AT1G64940.1 22.222 495 325 15 10 458 1 481 1.50e-13 73.2
Msa1308330 AT4G39950.1 23.043 460 310 18 33 456 51 502 1.55e-13 73.2
Msa1308330 AT1G13100.1 25.054 459 291 17 34 456 24 465 1.73e-13 73.2
Msa1308330 AT4G39950.2 23.043 460 310 18 33 456 91 542 1.74e-13 73.2
Msa1308330 AT2G26710.1 24.148 352 227 11 133 460 157 492 1.81e-13 73.2
Msa1308330 AT3G48280.1 23.493 481 295 17 14 456 11 456 2.03e-13 72.8
Msa1308330 AT4G37320.1 25.532 235 156 7 229 457 239 460 2.05e-13 72.8
Msa1308330 AT2G46960.1 26.250 240 162 8 219 452 139 369 2.68e-13 72.0
Msa1308330 AT2G46960.2 26.250 240 162 8 219 452 255 485 2.71e-13 72.4
Msa1308330 AT3G26310.1 25.210 238 161 6 227 456 236 464 3.07e-13 72.4
Msa1308330 AT5G47990.1 27.184 206 133 6 254 453 282 476 6.00e-13 71.2
Msa1308330 AT2G44890.1 23.166 259 157 11 238 470 252 494 8.32e-13 70.9
Msa1308330 AT5G36110.1 24.251 334 223 9 136 459 139 452 9.48e-13 70.5
Msa1308330 AT1G64930.1 27.895 190 129 4 267 453 292 476 9.75e-13 70.9
Msa1308330 AT4G22690.1 27.451 204 137 5 233 431 297 494 1.03e-12 70.9
Msa1308330 AT4G22710.1 27.451 204 137 5 233 431 266 463 1.10e-12 70.5
Msa1308330 AT3G20960.1 27.225 191 124 5 254 439 178 358 1.96e-12 69.3
Msa1308330 AT3G61040.2 31.868 182 107 7 196 362 196 375 2.54e-12 68.9
Msa1308330 AT3G20080.2 27.041 196 129 5 262 453 292 477 2.78e-12 69.3
Msa1308330 AT3G20080.1 27.041 196 129 5 262 453 292 477 2.78e-12 69.3
Msa1308330 AT3G20080.4 28.736 174 114 4 284 453 173 340 3.13e-12 68.6
Msa1308330 AT3G20080.5 28.736 174 114 4 284 453 173 340 3.13e-12 68.6
Msa1308330 AT3G20080.6 28.736 174 114 4 284 453 173 340 3.13e-12 68.6
Msa1308330 AT3G20080.3 28.736 174 114 4 284 453 173 340 3.13e-12 68.6
Msa1308330 AT3G26190.1 23.165 436 283 13 34 433 24 443 3.24e-12 68.9
Msa1308330 AT1G01280.1 23.256 344 229 11 139 453 136 473 3.46e-12 68.9
Msa1308330 AT2G22330.1 21.862 494 327 17 12 457 23 505 3.49e-12 68.9
Msa1308330 AT5G06900.1 25.105 239 159 8 226 456 239 465 3.66e-12 68.9
Msa1308330 AT3G20960.2 25.854 205 137 5 254 453 281 475 3.93e-12 68.9
Msa1308330 AT4G12310.1 24.299 214 154 3 243 453 272 480 4.29e-12 68.6
Msa1308330 AT2G22330.2 22.065 494 326 19 12 457 46 528 5.67e-12 68.6
Msa1308330 AT2G12190.1 26.471 238 155 7 231 458 255 482 1.45e-11 67.0
Msa1308330 AT4G15110.1 19.318 528 343 19 22 483 68 578 3.06e-11 66.2
Msa1308330 AT5G24950.1 21.778 450 312 13 34 456 28 464 3.27e-11 65.9
Msa1308330 AT4G39500.1 24.167 240 154 8 233 457 214 440 3.31e-11 65.9
Msa1308330 AT4G12320.1 22.831 219 161 3 241 456 268 481 3.38e-11 65.9
Msa1308330 AT4G39500.2 24.167 240 154 8 233 457 264 490 3.79e-11 65.9
Msa1308330 AT3G26220.1 24.883 213 152 4 254 464 272 478 5.03e-11 65.5
Msa1308330 AT1G64950.1 25.106 235 160 5 231 458 255 480 5.30e-11 65.1
Msa1308330 AT2G44890.2 21.825 252 151 10 238 470 252 476 6.80e-11 64.7
Msa1308330 AT5G36130.1 30.400 125 77 2 335 459 1 115 7.81e-11 60.5

Find 133 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTTAATGTTCCTACTTT+TGG 0.165158 8_4:+4592266 Msa1308330:CDS
GGTTTCAGCACATTTCTTTA+AGG 0.199078 8_4:+4592208 Msa1308330:CDS
GACAGCCAGTAGATGTCTTC+TGG 0.203142 8_4:+4594339 Msa1308330:CDS
CTTCAAGGATGGCCCATTAT+TGG 0.243524 8_4:+4592065 Msa1308330:CDS
CTATCAGGATCATACTTATC+AGG 0.268371 8_4:-4594991 None:intergenic
CACCTTTCCCTGAGATTGAT+TGG 0.284146 8_4:+4595172 Msa1308330:CDS
TGTTGACTAAGATCGGATTC+AGG 0.292415 8_4:-4592233 None:intergenic
ACGAAGAAGTCCTCCAATAA+TGG 0.301517 8_4:-4592078 None:intergenic
GATGAGTTTAGCGGCAATTA+AGG 0.304933 8_4:-4591997 None:intergenic
ATCTGCAGATAAAAGCAATT+TGG 0.309032 8_4:+4595112 Msa1308330:CDS
ATGGGCCATCCTTGAAGAAT+TGG 0.322124 8_4:-4592059 None:intergenic
ATCTGTCTACTTATCATCAT+TGG 0.323190 8_4:+4591869 Msa1308330:five_prime_UTR
CAATTTGGACTCATCTTCTA+AGG 0.327232 8_4:+4595127 Msa1308330:CDS
CTTCCCATACCTGCCAATTC+CGG 0.329749 8_4:+4594447 Msa1308330:CDS
GTGACTTCAGATTCTGTTGT+TGG 0.337685 8_4:-4594607 None:intergenic
GCATTCTCGTACATTTCCTT+TGG 0.358134 8_4:+4595051 Msa1308330:CDS
CTCCCAACAGCAAACCTATC+AGG 0.364597 8_4:-4595006 None:intergenic
TAGAGTGGATCATGATGTTT+TGG 0.369122 8_4:+4594774 Msa1308330:CDS
GGAGATTCCCTTGTGTTACT+AGG 0.382524 8_4:+4591774 Msa1308330:five_prime_UTR
GATTTAATGAATCAGATGAT+TGG 0.384362 8_4:+4595462 Msa1308330:three_prime_UTR
AGGGAAGAAGACAAGGCAGC+AGG 0.385509 8_4:+4595027 Msa1308330:CDS
CGGCAATTAAGGTTGTGATT+AGG 0.386433 8_4:-4591986 None:intergenic
CATCCCCTGCATTTGCAAAC+AGG 0.390380 8_4:+4594947 Msa1308330:CDS
AACCTCAGGACCAATCAAAA+AGG 0.398581 8_4:-4592189 None:intergenic
TGGGCCATCCTTGAAGAATT+GGG 0.402539 8_4:-4592058 None:intergenic
CGAAGAAGTCCTCCAATAAT+GGG 0.405715 8_4:-4592077 None:intergenic
AGGTTGTGATTAGGAGGAGA+AGG 0.420286 8_4:-4591977 None:intergenic
GTTGCTTATGTTAAAATGAA+AGG 0.426526 8_4:+4595492 Msa1308330:three_prime_UTR
TTCTCGTACATTTCCTTTGG+AGG 0.427070 8_4:+4595054 Msa1308330:CDS
GGTTAGAGTAAGTTGCTGTT+TGG 0.427107 8_4:+4595514 Msa1308330:three_prime_UTR
CTGATAAGTATGATCCTGAT+AGG 0.431839 8_4:+4594992 Msa1308330:CDS
GGGAAGAAGACAAGGCAGCA+GGG 0.433779 8_4:+4595028 Msa1308330:CDS
CTATACACACACATGTTAAG+AGG 0.437056 8_4:-4595545 None:intergenic
TCTTCTAAGGAACTTTGAAC+TGG 0.442872 8_4:+4595140 Msa1308330:CDS
TGAGCCGGAATTGGCAGGTA+TGG 0.443576 8_4:-4594451 None:intergenic
ATGGCATTCCAATCAATCTC+AGG 0.443914 8_4:-4595180 None:intergenic
TTGTCACGGCGCCTGTGAGC+CGG 0.449434 8_4:-4594466 None:intergenic
CTTCTCAGCAACATAATTAG+TGG 0.469104 8_4:-4594850 None:intergenic
TTGCTTATGTTAAAATGAAA+GGG 0.469467 8_4:+4595493 Msa1308330:three_prime_UTR
GGAGGAGCAAAAGAACTTGA+TGG 0.471075 8_4:+4594738 Msa1308330:CDS
AACCTCTTGTTGACTAAGAT+CGG 0.473444 8_4:-4592240 None:intergenic
TTTATCTGCAGATATGCAAA+AGG 0.473602 8_4:-4595102 None:intergenic
ATCCTGATAGGTTTGCTGTT+GGG 0.477009 8_4:+4595004 Msa1308330:CDS
TGTTGATTATTCTGTTAGAC+AGG 0.477897 8_4:+4592307 Msa1308330:CDS
GCCTGTGAGCCGGAATTGGC+AGG 0.477946 8_4:-4594456 None:intergenic
CTTCAGATTCTGTTGTTGGT+CGG 0.478081 8_4:-4594603 None:intergenic
ACAGCCAGTAGATGTCTTCT+GGG 0.482587 8_4:+4594340 Msa1308330:CDS
GTTGACTAAGATCGGATTCA+GGG 0.484196 8_4:-4592232 None:intergenic
CGTGAAGAATACCCAAAACT+TGG 0.484402 8_4:+4592128 Msa1308330:CDS
ACCTGCCAATTCCGGCTCAC+AGG 0.485195 8_4:+4594455 Msa1308330:CDS
GGTAACCTGTTTGCAAATGC+AGG 0.491377 8_4:-4594952 None:intergenic
ACAGGACTATTTCTCAAAGT+GGG 0.492403 8_4:+4594264 Msa1308330:intron
CAAGAGTTATGTTAATCAGA+TGG 0.492898 8_4:+4592373 Msa1308330:CDS
GCTTCTTACGTGCGTTGTCA+CGG 0.498259 8_4:-4594480 None:intergenic
CAAGGATGGCCCATTATTGG+AGG 0.498969 8_4:+4592068 Msa1308330:CDS
TCCTTTGGAGGTGGTAGACA+TGG 0.499852 8_4:+4595066 Msa1308330:CDS
TTGTTCCACGATCTCGATAA+CGG 0.505372 8_4:+4594403 Msa1308330:CDS
GATTGGAATGCCATGGTTGT+CGG 0.509501 8_4:+4595189 Msa1308330:CDS
TTCCCTTGTGTTACTAGGAT+AGG 0.509984 8_4:+4591779 Msa1308330:five_prime_UTR
GGTTGTGATTAGGAGGAGAA+GGG 0.511938 8_4:-4591976 None:intergenic
AAGAAATGTGCTGAAACCTC+AGG 0.513655 8_4:-4592203 None:intergenic
CTGAGATGGATGTCTTGTAT+AGG 0.516553 8_4:+4594797 Msa1308330:CDS
GGAAGAAGACAAGGCAGCAG+GGG 0.518904 8_4:+4595029 Msa1308330:CDS
TACAGGACTATTTCTCAAAG+TGG 0.523781 8_4:+4594263 Msa1308330:intron
GTACCTTTCTGCTGTGGAGG+AGG 0.524031 8_4:+4594720 Msa1308330:CDS
TATGGGAAGAGAACACTGAT+TGG 0.527714 8_4:-4594433 None:intergenic
GTAGCAACTATATGACCCTT+CGG 0.529774 8_4:-4594925 None:intergenic
GCCATGGTTGTCGGAGTGAA+AGG 0.530574 8_4:+4595198 Msa1308330:CDS
TCGTACATTTCCTTTGGAGG+TGG 0.531183 8_4:+4595057 Msa1308330:CDS
GCTCCTCCTCCACAGCAGAA+AGG 0.536622 8_4:-4594723 None:intergenic
GGTGGTAGACATGGATGCCT+TGG 0.542441 8_4:+4595075 Msa1308330:CDS
CCAAGTGGAGGTGATTGAAC+TGG 0.542779 8_4:-4594668 None:intergenic
CTGATAGGTTTGCTGTTGGG+AGG 0.543129 8_4:+4595007 Msa1308330:CDS
GAGCCGGAATTGGCAGGTAT+GGG 0.543872 8_4:-4594450 None:intergenic
GAATGATGAGATGAGTTTAG+CGG 0.547929 8_4:-4592006 None:intergenic
CCAGTTCAATCACCTCCACT+TGG 0.551186 8_4:+4594668 Msa1308330:CDS
GATCCTGATAGGTTTGCTGT+TGG 0.553192 8_4:+4595003 Msa1308330:CDS
GCAACATAATTAGTGGAGGA+TGG 0.554985 8_4:-4594843 None:intergenic
TAAGCTCCCTCCGCTTGTAT+CGG 0.556665 8_4:-4595233 None:intergenic
TTAGGAGGAGAAGGGTGTTG+AGG 0.559180 8_4:-4591968 None:intergenic
ACGACCCAGAAGACATCTAC+TGG 0.559204 8_4:-4594344 None:intergenic
TGATAGGTTTGCTGTTGGGA+GGG 0.562010 8_4:+4595008 Msa1308330:CDS
CAATTAAGGTTGTGATTAGG+AGG 0.562414 8_4:-4591983 None:intergenic
GAAGAATACCCAAAACTTGG+TGG 0.564286 8_4:+4592131 Msa1308330:CDS
TCAATCACCTCCACTTGGAC+CGG 0.565035 8_4:+4594673 Msa1308330:CDS
ACAACACCAGGACCAAAAGT+AGG 0.567749 8_4:-4592278 None:intergenic
TCCTTTCACTCCGACAACCA+TGG 0.568314 8_4:-4595199 None:intergenic
ATCAAGATTCTAGTTATCCA+TGG 0.572135 8_4:-4595372 None:intergenic
TTCTCAAAGTGGGGATCAAG+CGG 0.572292 8_4:+4594274 Msa1308330:CDS
CAGTACACTGAAGCATATCA+TGG 0.573427 8_4:-4595272 None:intergenic
GGAGAAACACGGAGATAGAG+TGG 0.576770 8_4:+4594759 Msa1308330:CDS
ATCCGATCTTAGTCAACAAG+AGG 0.581839 8_4:+4592238 Msa1308330:CDS
GGGCCATCCTTGAAGAATTG+GGG 0.583288 8_4:-4592057 None:intergenic
CAGGACTATTTCTCAAAGTG+GGG 0.585427 8_4:+4594265 Msa1308330:intron
TTCCAATCAATCTCAGGGAA+AGG 0.587941 8_4:-4595174 None:intergenic
TCAGATGGTTTCTGAAGCTG+AGG 0.588740 8_4:+4592388 Msa1308330:CDS
ACAGTACCTTTCTGCTGTGG+AGG 0.598044 8_4:+4594717 Msa1308330:CDS
TCCATGTCTACCACCTCCAA+AGG 0.598791 8_4:-4595067 None:intergenic
GTTACACAGAAGATATGCTC+CGG 0.601362 8_4:-4594692 None:intergenic
TATCAGGATCATACTTATCA+GGG 0.602468 8_4:-4594990 None:intergenic
TGGCATTCCAATCAATCTCA+GGG 0.607944 8_4:-4595179 None:intergenic
TGAGATTGATTGGAATGCCA+TGG 0.611558 8_4:+4595182 Msa1308330:CDS
TCTATTATTATAGAGATGAG+TGG 0.615039 8_4:-4591820 None:intergenic
ACAACAGAATCTGAAGTCAC+AGG 0.617030 8_4:+4594610 Msa1308330:CDS
TGTTGGGAGGGAAGAAGACA+AGG 0.619569 8_4:+4595020 Msa1308330:CDS
GCATTCCGTTATCGAGATCG+TGG 0.619719 8_4:-4594408 None:intergenic
CGGAGTGAAAGGAAAAGTCA+TGG 0.620318 8_4:+4595209 Msa1308330:CDS
GTAACCTGTTTGCAAATGCA+GGG 0.623106 8_4:-4594951 None:intergenic
TAAAGAGTATGACATTCCGA+AGG 0.626156 8_4:+4594909 Msa1308330:CDS
TTCAGCGTCACAACAAGAGA+GGG 0.626251 8_4:+4594886 Msa1308330:CDS
CTCAGCAACATAATTAGTGG+AGG 0.626519 8_4:-4594847 None:intergenic
AAGATATGCTCCGGTCCAAG+TGG 0.630179 8_4:-4594683 None:intergenic
GATATGCAAAAGGCTCTCCA+AGG 0.635392 8_4:-4595092 None:intergenic
GAATCAGATGATTGGAGTGG+TGG 0.636282 8_4:+4595470 Msa1308330:three_prime_UTR
TTTCCTATCCTAGTAACACA+AGG 0.636807 8_4:-4591782 None:intergenic
GTTGACTGTTCATTTGACCA+TGG 0.637177 8_4:+4595355 Msa1308330:three_prime_UTR
ATTGACTCAAAATACAAAGA+CGG 0.637569 8_4:+4594580 Msa1308330:CDS
TCAGGGTCATTGAAAATGTG+TGG 0.641669 8_4:-4594973 None:intergenic
GGTCAAATGAACAGTCAACA+TGG 0.641696 8_4:-4595351 None:intergenic
TATACACACACATGTTAAGA+GGG 0.641881 8_4:-4595544 None:intergenic
TTTCAGCGTCACAACAAGAG+AGG 0.644267 8_4:+4594885 Msa1308330:CDS
ATATGCTCCGGTCCAAGTGG+AGG 0.646562 8_4:-4594680 None:intergenic
CAAACAGTACCTTTCTGCTG+TGG 0.649370 8_4:+4594714 Msa1308330:CDS
GGCCATCCTTGAAGAATTGG+GGG 0.652380 8_4:-4592056 None:intergenic
TTGACTAAGATCGGATTCAG+GGG 0.653441 8_4:-4592231 None:intergenic
TAGTGGAGGATGGAGTCTCA+AGG 0.655008 8_4:-4594833 None:intergenic
AAGTCATGGTCCGATACAAG+CGG 0.661756 8_4:+4595223 Msa1308330:CDS
AAAGAGTATGACATTCCGAA+GGG 0.680465 8_4:+4594910 Msa1308330:CDS
TCATGGTCCGATACAAGCGG+AGG 0.685096 8_4:+4595226 Msa1308330:CDS
TTCCTATCCTAGTAACACAA+GGG 0.686879 8_4:-4591781 None:intergenic
AAGAACTTGATGGAGAAACA+CGG 0.700452 8_4:+4594748 Msa1308330:CDS
AATGAATCAGATGATTGGAG+TGG 0.709803 8_4:+4595467 Msa1308330:three_prime_UTR
TAACCTGTTTGCAAATGCAG+GGG 0.730277 8_4:-4594950 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATCTTATAAAACATTTT+AGG + chr8_4:4591753-4591772 Msa1308330:five_prime_UTR 10.0%
!! AACTAGATATAATTATAATA+AGG - chr8_4:4592436-4592455 None:intergenic 10.0%
!!! ATTATTTTATTGATTTTGAT+TGG + chr8_4:4592573-4592592 Msa1308330:intron 10.0%
!!! TGTTAATAGTTTTTTTTTTT+TGG - chr8_4:4593772-4593791 None:intergenic 10.0%
!!! AAAAATATTACCTTTTTGAT+TGG + chr8_4:4592179-4592198 Msa1308330:CDS 15.0%
!! AAAAAACTATTAACATCAAA+AGG + chr8_4:4593777-4593796 Msa1308330:intron 15.0%
!! TTTCAATTACATTAAGAATT+TGG - chr8_4:4594036-4594055 None:intergenic 15.0%
!!! TTGTGTTATTTTATATTGTG+TGG + chr8_4:4592651-4592670 Msa1308330:intron 20.0%
!!! GATTTTAATCAAGTATTATG+AGG + chr8_4:4592723-4592742 Msa1308330:intron 20.0%
!! GGAATTTATGAATAAATCAA+TGG + chr8_4:4592744-4592763 Msa1308330:intron 20.0%
!! TTTATTATCATGTGATGAAT+TGG + chr8_4:4593015-4593034 Msa1308330:intron 20.0%
!! TTATTATCATGTGATGAATT+GGG + chr8_4:4593016-4593035 Msa1308330:intron 20.0%
!!! AATTGACCTTTTTTTTTCTA+AGG + chr8_4:4593128-4593147 Msa1308330:intron 20.0%
!!! ATTTAATGCTTTATTCTGTT+TGG + chr8_4:4593161-4593180 Msa1308330:intron 20.0%
!! ATACACATTGATGTAAATAA+CGG - chr8_4:4593299-4593318 None:intergenic 20.0%
!!! TTTACATCAATGTGTATTTT+TGG + chr8_4:4593302-4593321 Msa1308330:intron 20.0%
!! AATCATTCAATTAAAACTAC+AGG - chr8_4:4593527-4593546 None:intergenic 20.0%
!!! GTAGTTTTAATTGAATGATT+TGG + chr8_4:4593527-4593546 Msa1308330:intron 20.0%
!!! AGTTTTTTTTTTTTGGTTAC+AGG - chr8_4:4593765-4593784 None:intergenic 20.0%
!!! TTTTTTTTATCAAAACCTGA+GGG - chr8_4:4593813-4593832 None:intergenic 20.0%
!!! TTTTTTTTTATCAAAACCTG+AGG - chr8_4:4593814-4593833 None:intergenic 20.0%
!! TTCTATCAAAATTAACAACA+TGG + chr8_4:4593866-4593885 Msa1308330:intron 20.0%
!!! TCATTTTCAATTGTTGTTTA+AGG - chr8_4:4593908-4593927 None:intergenic 20.0%
!! AAACAACAATTGAAAATGAA+TGG + chr8_4:4593909-4593928 Msa1308330:intron 20.0%
!! AGTAATAACTTTATAGTAGA+TGG + chr8_4:4593936-4593955 Msa1308330:intron 20.0%
!!! ATTATCATATTTTGATAAGC+TGG + chr8_4:4594084-4594103 Msa1308330:intron 20.0%
!! TTGCTTATGTTAAAATGAAA+GGG + chr8_4:4595493-4595512 Msa1308330:three_prime_UTR 20.0%
! TCTATTATTATAGAGATGAG+TGG - chr8_4:4591823-4591842 None:intergenic 25.0%
! TTGGTATATCAACATTACAT+TGG + chr8_4:4592806-4592825 Msa1308330:intron 25.0%
! TATACTTCACACTAATAACA+TGG + chr8_4:4592966-4592985 Msa1308330:intron 25.0%
! GAGTTTCTAACAAAAAACAA+GGG - chr8_4:4593061-4593080 None:intergenic 25.0%
! TGAGTTTCTAACAAAAAACA+AGG - chr8_4:4593062-4593081 None:intergenic 25.0%
! CAAAACAGCAATAAGAAATA+TGG - chr8_4:4593100-4593119 None:intergenic 25.0%
!! AGAATCAATTTTTGTCATCA+CGG - chr8_4:4593330-4593349 None:intergenic 25.0%
! TTGAATGTAAAAATCACGTT+TGG + chr8_4:4593443-4593462 Msa1308330:intron 25.0%
!! ATTTCTAGAAAAATGACACA+AGG - chr8_4:4593685-4593704 None:intergenic 25.0%
! AAAATTAACAACATGGTAGT+TGG + chr8_4:4593873-4593892 Msa1308330:intron 25.0%
! AAATTAACAACATGGTAGTT+GGG + chr8_4:4593874-4593893 Msa1308330:intron 25.0%
! AATAACTTTATAGTAGATGG+TGG + chr8_4:4593939-4593958 Msa1308330:intron 25.0%
! TTTGATACCATTATATACCA+TGG - chr8_4:4594144-4594163 None:intergenic 25.0%
!! ATTGACTCAAAATACAAAGA+CGG + chr8_4:4594580-4594599 Msa1308330:CDS 25.0%
! GATTTAATGAATCAGATGAT+TGG + chr8_4:4595462-4595481 Msa1308330:three_prime_UTR 25.0%
! GTTGCTTATGTTAAAATGAA+AGG + chr8_4:4595492-4595511 Msa1308330:three_prime_UTR 25.0%
ATCTGTCTACTTATCATCAT+TGG + chr8_4:4591869-4591888 Msa1308330:five_prime_UTR 30.0%
AACATCATCATCATCATCAA+TGG + chr8_4:4591923-4591942 Msa1308330:exon 30.0%
!! TCATCAATGGATGTTTTTGA+TGG + chr8_4:4591936-4591955 Msa1308330:exon 30.0%
!!! GGTAAACGTTTTTTGGATTT+GGG - chr8_4:4592038-4592057 None:intergenic 30.0%
TCTTCACGAAGCATAAAAAT+TGG - chr8_4:4592116-4592135 None:intergenic 30.0%
! TAAAAACACCACCAAGTTTT+GGG - chr8_4:4592142-4592161 None:intergenic 30.0%
! CAGTTTAATGTTCCTACTTT+TGG + chr8_4:4592266-4592285 Msa1308330:CDS 30.0%
! TGTTGATTATTCTGTTAGAC+AGG + chr8_4:4592307-4592326 Msa1308330:CDS 30.0%
!!! CTTTTTTACTGAAGCTCTTA+GGG + chr8_4:4592340-4592359 Msa1308330:CDS 30.0%
CAAGAGTTATGTTAATCAGA+TGG + chr8_4:4592373-4592392 Msa1308330:CDS 30.0%
ATTCAATATAATCACGTGTC+CGG - chr8_4:4592535-4592554 None:intergenic 30.0%
ATAACAAATCCTGAATGTGT+TGG + chr8_4:4592787-4592806 Msa1308330:intron 30.0%
GTGCATACGAAAAATGTAAT+CGG + chr8_4:4592883-4592902 Msa1308330:intron 30.0%
TGCATACGAAAAATGTAATC+GGG + chr8_4:4592884-4592903 Msa1308330:intron 30.0%
!! TGAATTGGGAAGCATTTATT+TGG + chr8_4:4593030-4593049 Msa1308330:intron 30.0%
TTTGTTAGAAACTCAGTAGT+TGG + chr8_4:4593067-4593086 Msa1308330:intron 30.0%
! TAATGCTTTATTCTGTTTGG+TGG + chr8_4:4593164-4593183 Msa1308330:intron 30.0%
! AAAGTGAGTTGAATGTTAAG+TGG + chr8_4:4593367-4593386 Msa1308330:intron 30.0%
GTGGTTTATGACTTTATGTT+AGG + chr8_4:4593386-4593405 Msa1308330:intron 30.0%
GAGTTTGAATCAATTCTAGT+TGG + chr8_4:4593465-4593484 Msa1308330:intron 30.0%
! TTTGAATCAATTCTAGTTGG+TGG + chr8_4:4593468-4593487 Msa1308330:intron 30.0%
TATATAACTGATCTCACCTA+AGG - chr8_4:4593561-4593580 None:intergenic 30.0%
TTAGGTGAGATCAGTTATAT+AGG + chr8_4:4593560-4593579 Msa1308330:intron 30.0%
!!! TAAGTGAAGAATTTTAGCTC+TGG + chr8_4:4593591-4593610 Msa1308330:intron 30.0%
TAGAAAAATGACACAAGGAA+CGG - chr8_4:4593680-4593699 None:intergenic 30.0%
AATTAACAACATGGTAGTTG+GGG + chr8_4:4593875-4593894 Msa1308330:intron 30.0%
CAACAATTGAAAATGAATGG+AGG + chr8_4:4593912-4593931 Msa1308330:intron 30.0%
CAAACATGAACCAAATTTAC+AGG + chr8_4:4594246-4594265 Msa1308330:intron 30.0%
GAGAAATAGTCCTGTAAATT+TGG - chr8_4:4594259-4594278 None:intergenic 30.0%
TATCAGGATCATACTTATCA+GGG - chr8_4:4594993-4595012 None:intergenic 30.0%
TTTATCTGCAGATATGCAAA+AGG - chr8_4:4595105-4595124 None:intergenic 30.0%
ATCTGCAGATAAAAGCAATT+TGG + chr8_4:4595112-4595131 Msa1308330:CDS 30.0%
! ATCAAGATTCTAGTTATCCA+TGG - chr8_4:4595375-4595394 None:intergenic 30.0%
! TTTTGTGCAATTGTAGTAAG+TGG + chr8_4:4595412-4595431 Msa1308330:three_prime_UTR 30.0%
TATACACACACATGTTAAGA+GGG - chr8_4:4595547-4595566 None:intergenic 30.0%
TTCCTATCCTAGTAACACAA+GGG - chr8_4:4591784-4591803 None:intergenic 35.0%
TTTCCTATCCTAGTAACACA+AGG - chr8_4:4591785-4591804 None:intergenic 35.0%
CAATTAAGGTTGTGATTAGG+AGG - chr8_4:4591986-4592005 None:intergenic 35.0%
GAATGATGAGATGAGTTTAG+CGG - chr8_4:4592009-4592028 None:intergenic 35.0%
!!! GGGTAAACGTTTTTTGGATT+TGG - chr8_4:4592039-4592058 None:intergenic 35.0%
!!! AATTGGGGGTAAACGTTTTT+TGG - chr8_4:4592045-4592064 None:intergenic 35.0%
! GGACTTCTTCGTTTTCTTAA+AGG + chr8_4:4592089-4592108 Msa1308330:CDS 35.0%
! GTAAAAACACCACCAAGTTT+TGG - chr8_4:4592143-4592162 None:intergenic 35.0%
GGTTTCAGCACATTTCTTTA+AGG + chr8_4:4592208-4592227 Msa1308330:CDS 35.0%
! AACCTCTTGTTGACTAAGAT+CGG - chr8_4:4592243-4592262 None:intergenic 35.0%
TCAACATCAAAAACAACACC+AGG - chr8_4:4592293-4592312 None:intergenic 35.0%
!!! GCTTTTTTACTGAAGCTCTT+AGG + chr8_4:4592339-4592358 Msa1308330:CDS 35.0%
! ATGTCTTCGATAAGAAGTGT+CGG - chr8_4:4592484-4592503 None:intergenic 35.0%
GTTGATATACCAACACATTC+AGG - chr8_4:4592799-4592818 None:intergenic 35.0%
GATCCCTTAAGCAAGATATT+GGG + chr8_4:4592849-4592868 Msa1308330:intron 35.0%
GAACCCAATATCTTGCTTAA+GGG - chr8_4:4592855-4592874 None:intergenic 35.0%
TGAACCCAATATCTTGCTTA+AGG - chr8_4:4592856-4592875 None:intergenic 35.0%
! TAGAAACTCAGTAGTTGGTA+TGG + chr8_4:4593072-4593091 Msa1308330:intron 35.0%
! ACGTGGCCTTAGAAAAAAAA+AGG - chr8_4:4593137-4593156 None:intergenic 35.0%
! TAAAGCATTAAATGCACACG+TGG - chr8_4:4593154-4593173 None:intergenic 35.0%
! TTATTCTGTTTGGTGGTAAC+TGG + chr8_4:4593171-4593190 Msa1308330:intron 35.0%
!! TGATTTGGCTTTATGACCTT+AGG + chr8_4:4593542-4593561 Msa1308330:intron 35.0%
!!! AAAGGAAACTTTTTTCCCTC+AGG + chr8_4:4593795-4593814 Msa1308330:intron 35.0%
ATTAACAACATGGTAGTTGG+GGG + chr8_4:4593876-4593895 Msa1308330:intron 35.0%
! ATTTGGCTTCATGAAAAGTG+TGG - chr8_4:4594019-4594038 None:intergenic 35.0%
GACATGACCATGGTATATAA+TGG + chr8_4:4594134-4594153 Msa1308330:intron 35.0%
AACAAACAATCAAGTCTCAG+AGG - chr8_4:4594167-4594186 None:intergenic 35.0%
! TACAGGACTATTTCTCAAAG+TGG + chr8_4:4594263-4594282 Msa1308330:intron 35.0%
! ACAGGACTATTTCTCAAAGT+GGG + chr8_4:4594264-4594283 Msa1308330:intron 35.0%
!! AAAAAGTGCTGACAAATCAG+AGG + chr8_4:4594537-4594556 Msa1308330:CDS 35.0%
AAGAACTTGATGGAGAAACA+CGG + chr8_4:4594748-4594767 Msa1308330:CDS 35.0%
! TAGAGTGGATCATGATGTTT+TGG + chr8_4:4594774-4594793 Msa1308330:CDS 35.0%
CTTCTCAGCAACATAATTAG+TGG - chr8_4:4594853-4594872 None:intergenic 35.0%
! TAAAGAGTATGACATTCCGA+AGG + chr8_4:4594909-4594928 Msa1308330:CDS 35.0%
! AAAGAGTATGACATTCCGAA+GGG + chr8_4:4594910-4594929 Msa1308330:CDS 35.0%
CTATCAGGATCATACTTATC+AGG - chr8_4:4594994-4595013 None:intergenic 35.0%
CTGATAAGTATGATCCTGAT+AGG + chr8_4:4594992-4595011 Msa1308330:CDS 35.0%
CAATTTGGACTCATCTTCTA+AGG + chr8_4:4595127-4595146 Msa1308330:CDS 35.0%
! TCTTCTAAGGAACTTTGAAC+TGG + chr8_4:4595140-4595159 Msa1308330:CDS 35.0%
AATGAATCAGATGATTGGAG+TGG + chr8_4:4595467-4595486 Msa1308330:three_prime_UTR 35.0%
CTATACACACACATGTTAAG+AGG - chr8_4:4595548-4595567 None:intergenic 35.0%
! TTCCCTTGTGTTACTAGGAT+AGG + chr8_4:4591779-4591798 Msa1308330:five_prime_UTR 40.0%
CGGCAATTAAGGTTGTGATT+AGG - chr8_4:4591989-4592008 None:intergenic 40.0%
GATGAGTTTAGCGGCAATTA+AGG - chr8_4:4592000-4592019 None:intergenic 40.0%
CGAAGAAGTCCTCCAATAAT+GGG - chr8_4:4592080-4592099 None:intergenic 40.0%
ACGAAGAAGTCCTCCAATAA+TGG - chr8_4:4592081-4592100 None:intergenic 40.0%
CGTGAAGAATACCCAAAACT+TGG + chr8_4:4592128-4592147 Msa1308330:CDS 40.0%
GAAGAATACCCAAAACTTGG+TGG + chr8_4:4592131-4592150 Msa1308330:CDS 40.0%
!! TACCTTTTTGATTGGTCCTG+AGG + chr8_4:4592187-4592206 Msa1308330:CDS 40.0%
AACCTCAGGACCAATCAAAA+AGG - chr8_4:4592192-4592211 None:intergenic 40.0%
AAGAAATGTGCTGAAACCTC+AGG - chr8_4:4592206-4592225 None:intergenic 40.0%
TTGACTAAGATCGGATTCAG+GGG - chr8_4:4592234-4592253 None:intergenic 40.0%
GTTGACTAAGATCGGATTCA+GGG - chr8_4:4592235-4592254 None:intergenic 40.0%
! TGTTGACTAAGATCGGATTC+AGG - chr8_4:4592236-4592255 None:intergenic 40.0%
ATCCGATCTTAGTCAACAAG+AGG + chr8_4:4592238-4592257 Msa1308330:CDS 40.0%
!! AATGTTCCTACTTTTGGTCC+TGG + chr8_4:4592272-4592291 Msa1308330:CDS 40.0%
!! TGTCTTCGATAAGAAGTGTC+GGG - chr8_4:4592483-4592502 None:intergenic 40.0%
GTCAGCATTAATGTCATGTC+CGG + chr8_4:4592595-4592614 Msa1308330:intron 40.0%
TTTATGAAGCACACTGACAC+CGG - chr8_4:4592617-4592636 None:intergenic 40.0%
! GGATTGTCTGTTTTACGACT+AGG + chr8_4:4592672-4592691 Msa1308330:intron 40.0%
CAACATTACATTGGTGTGAG+TGG + chr8_4:4592815-4592834 Msa1308330:intron 40.0%
GGATCCCTTAAGCAAGATAT+TGG + chr8_4:4592848-4592867 Msa1308330:intron 40.0%
!! ATCAATTCTAGTTGGTGGTC+TGG + chr8_4:4593473-4593492 Msa1308330:intron 40.0%
!! AGTGTGGAGTTGATAACCAT+TGG - chr8_4:4594003-4594022 None:intergenic 40.0%
GTTTGAACTTGACATGACCA+TGG + chr8_4:4594124-4594143 Msa1308330:intron 40.0%
GCAAAAGAAAGTTGCAAGAG+AGG - chr8_4:4594214-4594233 None:intergenic 40.0%
! CAGGACTATTTCTCAAAGTG+GGG + chr8_4:4594265-4594284 Msa1308330:intron 40.0%
TTGTTCCACGATCTCGATAA+CGG + chr8_4:4594403-4594422 Msa1308330:CDS 40.0%
TATGGGAAGAGAACACTGAT+TGG - chr8_4:4594436-4594455 None:intergenic 40.0%
CTTCAGATTCTGTTGTTGGT+CGG - chr8_4:4594606-4594625 None:intergenic 40.0%
GTGACTTCAGATTCTGTTGT+TGG - chr8_4:4594610-4594629 None:intergenic 40.0%
! ACAACAGAATCTGAAGTCAC+AGG + chr8_4:4594610-4594629 Msa1308330:CDS 40.0%
GTTACACAGAAGATATGCTC+CGG - chr8_4:4594695-4594714 None:intergenic 40.0%
!!! TCATGATGTTTTGGCTGAGA+TGG + chr8_4:4594783-4594802 Msa1308330:CDS 40.0%
CTGAGATGGATGTCTTGTAT+AGG + chr8_4:4594797-4594816 Msa1308330:CDS 40.0%
GCAACATAATTAGTGGAGGA+TGG - chr8_4:4594846-4594865 None:intergenic 40.0%
CTCAGCAACATAATTAGTGG+AGG - chr8_4:4594850-4594869 None:intergenic 40.0%
GTAGCAACTATATGACCCTT+CGG - chr8_4:4594928-4594947 None:intergenic 40.0%
TAACCTGTTTGCAAATGCAG+GGG - chr8_4:4594953-4594972 None:intergenic 40.0%
GTAACCTGTTTGCAAATGCA+GGG - chr8_4:4594954-4594973 None:intergenic 40.0%
TCAGGGTCATTGAAAATGTG+TGG - chr8_4:4594976-4594995 None:intergenic 40.0%
!! ATCCTGATAGGTTTGCTGTT+GGG + chr8_4:4595004-4595023 Msa1308330:CDS 40.0%
GCATTCTCGTACATTTCCTT+TGG + chr8_4:4595051-4595070 Msa1308330:CDS 40.0%
TTCTCGTACATTTCCTTTGG+AGG + chr8_4:4595054-4595073 Msa1308330:CDS 40.0%
TTCCAATCAATCTCAGGGAA+AGG - chr8_4:4595177-4595196 None:intergenic 40.0%
TGGCATTCCAATCAATCTCA+GGG - chr8_4:4595182-4595201 None:intergenic 40.0%
ATGGCATTCCAATCAATCTC+AGG - chr8_4:4595183-4595202 None:intergenic 40.0%
TGAGATTGATTGGAATGCCA+TGG + chr8_4:4595182-4595201 Msa1308330:CDS 40.0%
CAGTACACTGAAGCATATCA+TGG - chr8_4:4595275-4595294 None:intergenic 40.0%
GGTCAAATGAACAGTCAACA+TGG - chr8_4:4595354-4595373 None:intergenic 40.0%
GTTGACTGTTCATTTGACCA+TGG + chr8_4:4595355-4595374 Msa1308330:three_prime_UTR 40.0%
! GGTTAGAGTAAGTTGCTGTT+TGG + chr8_4:4595514-4595533 Msa1308330:three_prime_UTR 40.0%
! GGAGATTCCCTTGTGTTACT+AGG + chr8_4:4591774-4591793 Msa1308330:five_prime_UTR 45.0%
GGTTGTGATTAGGAGGAGAA+GGG - chr8_4:4591979-4591998 None:intergenic 45.0%
AGGTTGTGATTAGGAGGAGA+AGG - chr8_4:4591980-4591999 None:intergenic 45.0%
CGTTTACCCCCAATTCTTCA+AGG + chr8_4:4592050-4592069 Msa1308330:CDS 45.0%
TACCCCCAATTCTTCAAGGA+TGG + chr8_4:4592054-4592073 Msa1308330:CDS 45.0%
TGGGCCATCCTTGAAGAATT+GGG - chr8_4:4592061-4592080 None:intergenic 45.0%
ATGGGCCATCCTTGAAGAAT+TGG - chr8_4:4592062-4592081 None:intergenic 45.0%
CTTCAAGGATGGCCCATTAT+TGG + chr8_4:4592065-4592084 Msa1308330:CDS 45.0%
ACAACACCAGGACCAAAAGT+AGG - chr8_4:4592281-4592300 None:intergenic 45.0%
!! TCAGATGGTTTCTGAAGCTG+AGG + chr8_4:4592388-4592407 Msa1308330:CDS 45.0%
!! GTCTTCGATAAGAAGTGTCG+GGG - chr8_4:4592482-4592501 None:intergenic 45.0%
CAATATAATCACGTGTCCGG+TGG - chr8_4:4592532-4592551 None:intergenic 45.0%
GGTGTGAGTGGAATTTGACT+CGG + chr8_4:4592827-4592846 Msa1308330:intron 45.0%
ATGTAATCGGGACCCACTTA+AGG + chr8_4:4592896-4592915 Msa1308330:intron 45.0%
CCTAACTGGACACCTTAAGT+GGG - chr8_4:4592911-4592930 None:intergenic 45.0%
ACCTAACTGGACACCTTAAG+TGG - chr8_4:4592912-4592931 None:intergenic 45.0%
GTGGTAACTGGAAATACCTG+TGG + chr8_4:4593183-4593202 Msa1308330:intron 45.0%
GCAGTCATGTTTGCATCCAA+TGG + chr8_4:4593984-4594003 Msa1308330:intron 45.0%
TTCTCAAAGTGGGGATCAAG+CGG + chr8_4:4594274-4594293 Msa1308330:CDS 45.0%
ACAGCCAGTAGATGTCTTCT+GGG + chr8_4:4594340-4594359 Msa1308330:CDS 45.0%
CTGCAAAAAGAGCAGCAATG+AGG - chr8_4:4594639-4594658 None:intergenic 45.0%
! CTCATTGCTGCTCTTTTTGC+AGG + chr8_4:4594637-4594656 Msa1308330:CDS 45.0%
CAAACAGTACCTTTCTGCTG+TGG + chr8_4:4594714-4594733 Msa1308330:CDS 45.0%
GGAGGAGCAAAAGAACTTGA+TGG + chr8_4:4594738-4594757 Msa1308330:CDS 45.0%
TTTCAGCGTCACAACAAGAG+AGG + chr8_4:4594885-4594904 Msa1308330:CDS 45.0%
TTCAGCGTCACAACAAGAGA+GGG + chr8_4:4594886-4594905 Msa1308330:CDS 45.0%
GGTAACCTGTTTGCAAATGC+AGG - chr8_4:4594955-4594974 None:intergenic 45.0%
!! GATCCTGATAGGTTTGCTGT+TGG + chr8_4:4595003-4595022 Msa1308330:CDS 45.0%
!! TGATAGGTTTGCTGTTGGGA+GGG + chr8_4:4595008-4595027 Msa1308330:CDS 45.0%
! TCGTACATTTCCTTTGGAGG+TGG + chr8_4:4595057-4595076 Msa1308330:CDS 45.0%
GATATGCAAAAGGCTCTCCA+AGG - chr8_4:4595095-4595114 None:intergenic 45.0%
CACCTTTCCCTGAGATTGAT+TGG + chr8_4:4595172-4595191 Msa1308330:CDS 45.0%
GATTGGAATGCCATGGTTGT+CGG + chr8_4:4595189-4595208 Msa1308330:CDS 45.0%
CGGAGTGAAAGGAAAAGTCA+TGG + chr8_4:4595209-4595228 Msa1308330:CDS 45.0%
AAGTCATGGTCCGATACAAG+CGG + chr8_4:4595223-4595242 Msa1308330:CDS 45.0%
GAATCAGATGATTGGAGTGG+TGG + chr8_4:4595470-4595489 Msa1308330:three_prime_UTR 45.0%
!! TTAGGAGGAGAAGGGTGTTG+AGG - chr8_4:4591971-4591990 None:intergenic 50.0%
GGCCATCCTTGAAGAATTGG+GGG - chr8_4:4592059-4592078 None:intergenic 50.0%
GGGCCATCCTTGAAGAATTG+GGG - chr8_4:4592060-4592079 None:intergenic 50.0%
CAAGGATGGCCCATTATTGG+AGG + chr8_4:4592068-4592087 Msa1308330:CDS 50.0%
! CCCACTTAAGGTGTCCAGTT+AGG + chr8_4:4592908-4592927 Msa1308330:intron 50.0%
AGGTGTCCAGTTAGGTTTCC+CGG + chr8_4:4592916-4592935 Msa1308330:intron 50.0%
! AAGTCGATGACTGACTCAGC+CGG - chr8_4:4592938-4592957 None:intergenic 50.0%
CAGTATGCACAGATCACCAC+AGG - chr8_4:4593202-4593221 None:intergenic 50.0%
CAGTTTACCAGAGACAGCAC+AGG - chr8_4:4593504-4593523 None:intergenic 50.0%
GACAGCCAGTAGATGTCTTC+TGG + chr8_4:4594339-4594358 Msa1308330:CDS 50.0%
ACGACCCAGAAGACATCTAC+TGG - chr8_4:4594347-4594366 None:intergenic 50.0%
GCATTCCGTTATCGAGATCG+TGG - chr8_4:4594411-4594430 None:intergenic 50.0%
CTTCCCATACCTGCCAATTC+CGG + chr8_4:4594447-4594466 Msa1308330:CDS 50.0%
GCTTCTTACGTGCGTTGTCA+CGG - chr8_4:4594483-4594502 None:intergenic 50.0%
CCAAGTGGAGGTGATTGAAC+TGG - chr8_4:4594671-4594690 None:intergenic 50.0%
CCAGTTCAATCACCTCCACT+TGG + chr8_4:4594668-4594687 Msa1308330:CDS 50.0%
TCAATCACCTCCACTTGGAC+CGG + chr8_4:4594673-4594692 Msa1308330:CDS 50.0%
AAGATATGCTCCGGTCCAAG+TGG - chr8_4:4594686-4594705 None:intergenic 50.0%
ACAGTACCTTTCTGCTGTGG+AGG + chr8_4:4594717-4594736 Msa1308330:CDS 50.0%
GGAGAAACACGGAGATAGAG+TGG + chr8_4:4594759-4594778 Msa1308330:CDS 50.0%
TAGTGGAGGATGGAGTCTCA+AGG - chr8_4:4594836-4594855 None:intergenic 50.0%
CATCCCCTGCATTTGCAAAC+AGG + chr8_4:4594947-4594966 Msa1308330:CDS 50.0%
CTCCCAACAGCAAACCTATC+AGG - chr8_4:4595009-4595028 None:intergenic 50.0%
!! CTGATAGGTTTGCTGTTGGG+AGG + chr8_4:4595007-4595026 Msa1308330:CDS 50.0%
TGTTGGGAGGGAAGAAGACA+AGG + chr8_4:4595020-4595039 Msa1308330:CDS 50.0%
! TCCTTTGGAGGTGGTAGACA+TGG + chr8_4:4595066-4595085 Msa1308330:CDS 50.0%
TCCATGTCTACCACCTCCAA+AGG - chr8_4:4595070-4595089 None:intergenic 50.0%
TCCTTTCACTCCGACAACCA+TGG - chr8_4:4595202-4595221 None:intergenic 50.0%
TAAGCTCCCTCCGCTTGTAT+CGG - chr8_4:4595236-4595255 None:intergenic 50.0%
CTGACGTGTCAGACAGACAC+AGG - chr8_4:4592509-4592528 None:intergenic 55.0%
ACTCAGCCGGGAAACCTAAC+TGG - chr8_4:4592925-4592944 None:intergenic 55.0%
! AGTCGATGACTGACTCAGCC+GGG - chr8_4:4592937-4592956 None:intergenic 55.0%
GAGCCGGAATTGGCAGGTAT+GGG - chr8_4:4594453-4594472 None:intergenic 55.0%
TGAGCCGGAATTGGCAGGTA+TGG - chr8_4:4594454-4594473 None:intergenic 55.0%
ATATGCTCCGGTCCAAGTGG+AGG - chr8_4:4594683-4594702 None:intergenic 55.0%
GTACCTTTCTGCTGTGGAGG+AGG + chr8_4:4594720-4594739 Msa1308330:CDS 55.0%
AGGGAAGAAGACAAGGCAGC+AGG + chr8_4:4595027-4595046 Msa1308330:CDS 55.0%
GGGAAGAAGACAAGGCAGCA+GGG + chr8_4:4595028-4595047 Msa1308330:CDS 55.0%
GGAAGAAGACAAGGCAGCAG+GGG + chr8_4:4595029-4595048 Msa1308330:CDS 55.0%
GGTGGTAGACATGGATGCCT+TGG + chr8_4:4595075-4595094 Msa1308330:CDS 55.0%
GCCATGGTTGTCGGAGTGAA+AGG + chr8_4:4595198-4595217 Msa1308330:CDS 55.0%
TCATGGTCCGATACAAGCGG+AGG + chr8_4:4595226-4595245 Msa1308330:CDS 55.0%
CATGGTCCGATACAAGCGGA+GGG + chr8_4:4595227-4595246 Msa1308330:CDS 55.0%
CTGTCTGACACGTCAGCCAC+CGG + chr8_4:4592513-4592532 Msa1308330:intron 60.0%
GGCAACACCTGTGCTGTCTC+TGG + chr8_4:4593494-4593513 Msa1308330:intron 60.0%
ACCTGCCAATTCCGGCTCAC+AGG + chr8_4:4594455-4594474 Msa1308330:CDS 60.0%
GCTCCTCCTCCACAGCAGAA+AGG - chr8_4:4594726-4594745 None:intergenic 60.0%
GCCTGTGAGCCGGAATTGGC+AGG - chr8_4:4594459-4594478 None:intergenic 65.0%
TTGTCACGGCGCCTGTGAGC+CGG - chr8_4:4594469-4594488 None:intergenic 65.0%
CGGCGCCTGTGAGCCGGAAT+TGG - chr8_4:4594463-4594482 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 4591734 4595579 4591734 ID=Msa1308330;Name=Msa1308330
chr8_4 mRNA 4591734 4595579 4591734 ID=Msa1308330-mRNA-1;Parent=Msa1308330;Name=Msa1308330-mRNA-1;_AED=0.21;_eAED=0.21;_QI=208|1|1|1|1|1|2|310|489
chr8_4 exon 4591734 4592409 4591734 ID=Msa1308330-mRNA-1:exon:1394;Parent=Msa1308330-mRNA-1
chr8_4 exon 4594268 4595579 4594268 ID=Msa1308330-mRNA-1:exon:1395;Parent=Msa1308330-mRNA-1
chr8_4 five_prime_UTR 4591734 4591941 4591734 ID=Msa1308330-mRNA-1:five_prime_utr;Parent=Msa1308330-mRNA-1
chr8_4 CDS 4591942 4592409 4591942 ID=Msa1308330-mRNA-1:cds;Parent=Msa1308330-mRNA-1
chr8_4 CDS 4594268 4595269 4594268 ID=Msa1308330-mRNA-1:cds;Parent=Msa1308330-mRNA-1
chr8_4 three_prime_UTR 4595270 4595579 4595270 ID=Msa1308330-mRNA-1:three_prime_utr;Parent=Msa1308330-mRNA-1
Gene Sequence

>Msa1308330

ATGGATGTTTTTGATGGAAACAAGTTCCTCAACACCCTTCTCCTCCTAATCACAACCTTAATTGCCGCTAAACTCATCTCATCATTCATAATACCCAAATCCAAAAAACGTTTACCCCCAATTCTTCAAGGATGGCCCATTATTGGAGGACTTCTTCGTTTTCTTAAAGGTCCAATTTTTATGCTTCGTGAAGAATACCCAAAACTTGGTGGTGTTTTTACATTGAAAATCTTTCATAAAAATATTACCTTTTTGATTGGTCCTGAGGTTTCAGCACATTTCTTTAAGGCCCCTGAATCCGATCTTAGTCAACAAGAGGTTTATCAGTTTAATGTTCCTACTTTTGGTCCTGGTGTTGTTTTTGATGTTGATTATTCTGTTAGACAGGAACAGTTTCGCTTTTTTACTGAAGCTCTTAGGGTTAATAAACTCAAGAGTTATGTTAATCAGATGGTTTCTGAAGCTGAGGACTATTTCTCAAAGTGGGGATCAAGCGGTGAAGTTGATCTGAAGTATGAGCTTGAGCATCTGATCATCTTGACAGCCAGTAGATGTCTTCTGGGTCGTGAAGTTCGTGACAAGCTCTTCGATGATGTCTCTGCATTGTTCCACGATCTCGATAACGGAATGCTTCCAATCAGTGTTCTCTTCCCATACCTGCCAATTCCGGCTCACAGGCGCCGTGACAACGCACGTAAGAAGCTTGCTGAAATCTTTGCAAACATCATATCTTCACGAAAAAGTGCTGACAAATCAGAGGACGACATGCTGCAGTGCTTCATTGACTCAAAATACAAAGACGGCCGACCAACAACAGAATCTGAAGTCACAGGACTCCTCATTGCTGCTCTTTTTGCAGGACAGCACACCAGTTCAATCACCTCCACTTGGACCGGAGCATATCTTCTGTGTAACAAACAGTACCTTTCTGCTGTGGAGGAGGAGCAAAAGAACTTGATGGAGAAACACGGAGATAGAGTGGATCATGATGTTTTGGCTGAGATGGATGTCTTGTATAGGTGCATTAAAGAAGCCTTGAGACTCCATCCTCCACTAATTATGTTGCTGAGAAGCTCACACAGCGATTTCAGCGTCACAACAAGAGAGGGTAAAGAGTATGACATTCCGAAGGGTCATATAGTTGCTACATCCCCTGCATTTGCAAACAGGTTACCACACATTTTCAATGACCCTGATAAGTATGATCCTGATAGGTTTGCTGTTGGGAGGGAAGAAGACAAGGCAGCAGGGGCATTCTCGTACATTTCCTTTGGAGGTGGTAGACATGGATGCCTTGGAGAGCCTTTTGCATATCTGCAGATAAAAGCAATTTGGACTCATCTTCTAAGGAACTTTGAACTGGAGCTTGTGTCACCTTTCCCTGAGATTGATTGGAATGCCATGGTTGTCGGAGTGAAAGGAAAAGTCATGGTCCGATACAAGCGGAGGGAGCTTACTGTTAATCAGTAG

Protein sequence

>Msa1308330

MDVFDGNKFLNTLLLLITTLIAAKLISSFIIPKSKKRLPPILQGWPIIGGLLRFLKGPIFMLREEYPKLGGVFTLKIFHKNITFLIGPEVSAHFFKAPESDLSQQEVYQFNVPTFGPGVVFDVDYSVRQEQFRFFTEALRVNKLKSYVNQMVSEAEDYFSKWGSSGEVDLKYELEHLIILTASRCLLGREVRDKLFDDVSALFHDLDNGMLPISVLFPYLPIPAHRRRDNARKKLAEIFANIISSRKSADKSEDDMLQCFIDSKYKDGRPTTESEVTGLLIAALFAGQHTSSITSTWTGAYLLCNKQYLSAVEEEQKNLMEKHGDRVDHDVLAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFSVTTREGKEYDIPKGHIVATSPAFANRLPHIFNDPDKYDPDRFAVGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFELELVSPFPEIDWNAMVVGVKGKVMVRYKRRELTVNQ*