Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263840 | XP_013465355.1 | 96.376 | 607 | 5 | 2 | 1 | 607 | 1 | 590 | 0.0 | 1201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263840 | sp|Q9FJH6|AB1F_ARATH | 82.807 | 570 | 86 | 1 | 38 | 607 | 38 | 595 | 0.0 | 1004 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263840 | A0A072VMQ2 | 96.376 | 607 | 5 | 2 | 1 | 607 | 1 | 590 | 0.0 | 1201 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0086350 | Msa0263840 | 0.800803 | 1.214194e-48 | -8.615850e-47 |
| Msa0222340 | Msa0263840 | 0.964036 | 7.991668e-123 | -8.615850e-47 |
| Msa0263840 | Msa0301680 | 0.993006 | 7.698329e-197 | -8.615850e-47 |
| Msa0263840 | Msa0339070 | 0.976829 | 1.403800e-142 | -8.615850e-47 |
| Msa0263840 | Msa0344530 | 0.800736 | 1.252886e-48 | -8.615850e-47 |
| Msa0263840 | Msa0477130 | -0.812808 | 3.518409e-51 | -8.615850e-47 |
| Msa0263840 | Msa0698360 | 0.811551 | 6.616594e-51 | -8.615850e-47 |
| Msa0263840 | Msa0749930 | 0.807756 | 4.327626e-50 | -8.615850e-47 |
| Msa0263840 | Msa0807050 | 0.819017 | 1.448039e-52 | -8.615850e-47 |
| Msa0263840 | Msa0830420 | 0.807799 | 4.237593e-50 | -8.615850e-47 |
| Msa0263840 | Msa0832990 | 0.818623 | 1.779595e-52 | -8.615850e-47 |
| Msa0263840 | Msa0944550 | 0.829977 | 3.805415e-55 | -8.615850e-47 |
| Msa0263840 | Msa1031810 | 0.813675 | 2.270293e-51 | -8.615850e-47 |
| Msa0263840 | Msa1032440 | 0.800534 | 1.378051e-48 | -8.615850e-47 |
| Msa0263840 | Msa1070850 | 0.827902 | 1.210567e-54 | -8.615850e-47 |
| Msa0263840 | Msa1118110 | 0.806623 | 7.518841e-50 | -8.615850e-47 |
| Msa0263840 | Msa1118750 | 0.834170 | 3.499626e-56 | -8.615850e-47 |
| Msa0263840 | Msa1132950 | 0.822420 | 2.391272e-53 | -8.615850e-47 |
| Msa0263840 | Msa1158670 | 0.817489 | 3.211501e-52 | -8.615850e-47 |
| Msa0263840 | Msa1437680 | 0.812766 | 3.593988e-51 | -8.615850e-47 |
| Msa0263840 | Msa1454860 | 0.802774 | 4.782479e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263840 | MtrunA17_Chr2g0327291 | 96.376 | 607 | 5 | 2 | 1 | 607 | 1 | 590 | 0.0 | 1201 |
| Msa0263840 | MtrunA17_Chr4g0028471 | 87.676 | 568 | 58 | 1 | 40 | 607 | 35 | 590 | 0.0 | 1050 |
| Msa0263840 | MtrunA17_Chr3g0119921 | 42.430 | 535 | 283 | 6 | 83 | 596 | 177 | 707 | 2.00e-150 | 450 |
| Msa0263840 | MtrunA17_Chr7g0220881 | 40.472 | 551 | 287 | 6 | 83 | 596 | 156 | 702 | 2.41e-145 | 437 |
| Msa0263840 | MtrunA17_Chr1g0181461 | 42.000 | 550 | 280 | 10 | 83 | 596 | 2 | 548 | 2.60e-144 | 429 |
| Msa0263840 | MtrunA17_Chr8g0371361 | 41.530 | 549 | 282 | 7 | 83 | 596 | 156 | 700 | 3.77e-144 | 434 |
| Msa0263840 | MtrunA17_Chr3g0129301 | 30.755 | 530 | 343 | 8 | 82 | 591 | 107 | 632 | 2.65e-69 | 238 |
| Msa0263840 | MtrunA17_Chr3g0129301 | 26.531 | 245 | 147 | 4 | 83 | 323 | 435 | 650 | 3.34e-19 | 92.0 |
| Msa0263840 | MtrunA17_Chr4g0061601 | 26.122 | 245 | 128 | 9 | 396 | 605 | 391 | 617 | 6.01e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0263840 | AT5G60790.1 | 82.807 | 570 | 86 | 1 | 38 | 607 | 38 | 595 | 0.0 | 1004 |
| Msa0263840 | AT3G54540.2 | 43.447 | 557 | 269 | 10 | 83 | 600 | 165 | 714 | 1.42e-153 | 459 |
| Msa0263840 | AT3G54540.1 | 43.447 | 557 | 269 | 10 | 83 | 600 | 165 | 714 | 1.42e-153 | 459 |
| Msa0263840 | AT1G64550.1 | 43.284 | 536 | 278 | 6 | 83 | 596 | 177 | 708 | 1.49e-151 | 454 |
| Msa0263840 | AT5G64840.1 | 31.191 | 529 | 342 | 7 | 82 | 591 | 99 | 624 | 1.46e-72 | 246 |
| Msa0263840 | AT5G64840.1 | 27.586 | 232 | 137 | 5 | 83 | 311 | 427 | 630 | 3.89e-17 | 85.9 |
| Msa0263840 | AT5G09930.1 | 30.769 | 533 | 345 | 8 | 83 | 595 | 86 | 614 | 3.19e-70 | 240 |
| Msa0263840 | AT5G09930.1 | 24.268 | 239 | 136 | 4 | 83 | 311 | 413 | 616 | 4.85e-15 | 79.0 |
Find 184 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCCCAAGATTTCCTTAA+TGG | 0.133001 | 2_2:-63578329 | Msa0263840:CDS |
| ATTTATGATGCTTATCAATT+TGG | 0.178671 | 2_2:-63577128 | Msa0263840:three_prime_UTR |
| AGGTCATAATCGTGACATTT+TGG | 0.184738 | 2_2:+63577308 | None:intergenic |
| GAAGAAATTTGACCGTATTT+TGG | 0.193189 | 2_2:-63578363 | Msa0263840:CDS |
| GAACATGCGAACCTGGAATT+TGG | 0.243453 | 2_2:+63581376 | None:intergenic |
| ATCCTTTCTTCCTCATTTCC+AGG | 0.254068 | 2_2:+63577717 | None:intergenic |
| CGCCACCGCTTCATCGAAAA+AGG | 0.264820 | 2_2:-63581182 | Msa0263840:CDS |
| TCTGAGTTGGAGCTAAATTA+TGG | 0.275758 | 2_2:-63579761 | Msa0263840:CDS |
| TCCTCTCTCTAGGGATATTC+AGG | 0.283104 | 2_2:-63581071 | Msa0263840:intron |
| CTTCTCACGTTCCAAATTCC+AGG | 0.293879 | 2_2:-63581387 | Msa0263840:five_prime_UTR |
| AGAGCAGCTATTGGGAAGTT+TGG | 0.294434 | 2_2:-63577693 | Msa0263840:CDS |
| GGAGAAAGAAGCTGAAATTC+TGG | 0.295585 | 2_2:-63579447 | Msa0263840:CDS |
| CCCACCTGTTCTCCAGTTTG+TGG | 0.300584 | 2_2:-63578000 | Msa0263840:CDS |
| TGACGAGGAAAGGTTGAAAT+TGG | 0.301469 | 2_2:-63579468 | Msa0263840:CDS |
| AAGGAATACATTGCACGATT+TGG | 0.328195 | 2_2:-63578161 | Msa0263840:CDS |
| GATAGTGTTGCTAACGGAAT+TGG | 0.333903 | 2_2:-63581142 | Msa0263840:CDS |
| ATCAGGTGGCCCATGAGATA+TGG | 0.335843 | 2_2:-63577452 | Msa0263840:CDS |
| GGTGATTTGGTTCCTTTAGA+TGG | 0.339333 | 2_2:-63577846 | Msa0263840:CDS |
| GAAGCTTATGACAGGTGATT+TGG | 0.339539 | 2_2:-63577859 | Msa0263840:CDS |
| CCAACATGATACATTGATAA+TGG | 0.340708 | 2_2:-63577090 | Msa0263840:three_prime_UTR |
| TTCTTGTAGATGAGATTATC+AGG | 0.347827 | 2_2:+63577957 | None:intergenic |
| CAGATGGGAAGGTGATATTA+TGG | 0.351979 | 2_2:-63577406 | Msa0263840:CDS |
| TATTTGTGCAGACACCATTA+AGG | 0.358821 | 2_2:+63578315 | None:intergenic |
| CAGTTTGTGGAGGTGACATT+TGG | 0.361508 | 2_2:-63577987 | Msa0263840:CDS |
| GAATGGTTGGGTTCATAAAC+AGG | 0.363149 | 2_2:+63579143 | None:intergenic |
| CGTGCTCTTCCCAGCTCCAT+TGG | 0.366938 | 2_2:+63577887 | None:intergenic |
| TGTTCAGACACGTGCTGAAC+TGG | 0.372673 | 2_2:-63578237 | Msa0263840:CDS |
| TGCTTATCAATTTGGTTGCT+TGG | 0.375022 | 2_2:-63577120 | Msa0263840:three_prime_UTR |
| GGGATACCAAGGTGATTTGT+AGG | 0.378062 | 2_2:+63579106 | None:intergenic |
| ATGGGATGGTGGCATGGTTC+TGG | 0.379571 | 2_2:-63577499 | Msa0263840:CDS |
| CTCTGACATGTCTGCGTTGG+AGG | 0.384118 | 2_2:-63579504 | Msa0263840:CDS |
| AGGTTTGGTTTGGTATATAG+AGG | 0.385993 | 2_2:+63581490 | None:intergenic |
| GTGCAATGCGAAGGTGATTA+TGG | 0.388699 | 2_2:+63577811 | None:intergenic |
| TTTGTTCCCATCCTCTCTCT+AGG | 0.391658 | 2_2:-63581081 | Msa0263840:CDS |
| CCATCCGATAAATTTCTCAT+AGG | 0.393413 | 2_2:+63577645 | None:intergenic |
| ATAGTGTTGCTAACGGAATT+GGG | 0.394864 | 2_2:-63581141 | Msa0263840:CDS |
| TGTCAGAGGCTTCAATTTCC+CGG | 0.399457 | 2_2:+63579519 | None:intergenic |
| TCGATATCTAAATGATTAGT+TGG | 0.399920 | 2_2:+63577555 | None:intergenic |
| ATTGTAGTACTTGTTTCCTC+TGG | 0.408831 | 2_2:-63577030 | Msa0263840:three_prime_UTR |
| GAAAGGATGAGAGCAGCTAT+TGG | 0.409176 | 2_2:-63577702 | Msa0263840:CDS |
| TCTACGCTACTTACAGCAAT+AGG | 0.411200 | 2_2:-63579590 | Msa0263840:CDS |
| GTGAATATAATCAAATGAAA+TGG | 0.414753 | 2_2:-63577231 | Msa0263840:three_prime_UTR |
| CTGGTTGGACCCAATGGAGC+TGG | 0.414943 | 2_2:-63577897 | Msa0263840:CDS |
| TCTACAAGAACATTGACTTC+GGG | 0.415122 | 2_2:-63577944 | Msa0263840:CDS |
| ACCTCCACAAACTGGAGAAC+AGG | 0.416071 | 2_2:+63577996 | None:intergenic |
| TTCAGACGTTATGGTTTGCT+TGG | 0.417788 | 2_2:-63579632 | Msa0263840:intron |
| CATAATATCACCTTCCCATC+TGG | 0.420837 | 2_2:+63577407 | None:intergenic |
| ATATCCATGTGGTCTGGAAT+AGG | 0.420995 | 2_2:+63579554 | None:intergenic |
| TTTGTTGAGGTGGTGAGGTT+TGG | 0.424164 | 2_2:+63581475 | None:intergenic |
| AGACACCATTAAGGAAATCT+TGG | 0.427382 | 2_2:+63578324 | None:intergenic |
| GATGCCTATGAGAAATTTAT+CGG | 0.431894 | 2_2:-63577649 | Msa0263840:CDS |
| TGGATATTTATCACCTTAGC+CGG | 0.433721 | 2_2:-63579538 | Msa0263840:CDS |
| CCCACCTGTACTGCTTCATC+TGG | 0.435159 | 2_2:+63578207 | None:intergenic |
| AATCACCTGTCATAAGCTTC+AGG | 0.435857 | 2_2:+63577862 | None:intergenic |
| TGAGGTGGTGAGGTTTGGTT+TGG | 0.436297 | 2_2:+63581480 | None:intergenic |
| ATTGGGAAGTTTGGATTGTC+GGG | 0.439397 | 2_2:-63577684 | Msa0263840:CDS |
| GGGTCCAACCAGAGCAATCC+TGG | 0.440264 | 2_2:+63577908 | None:intergenic |
| TGCAGTGGTGATGAGGAGTT+AGG | 0.448031 | 2_2:+63581425 | None:intergenic |
| ATGACCTTGTATTACAATGT+AGG | 0.448368 | 2_2:-63577292 | Msa0263840:three_prime_UTR |
| TCTTTATCAGTTACTTTCCA+TGG | 0.449572 | 2_2:-63579803 | Msa0263840:CDS |
| TCCTTTCTTCCTCATTTCCA+GGG | 0.450321 | 2_2:+63577718 | None:intergenic |
| GACTCCAGGATTGCTCTGGT+TGG | 0.450992 | 2_2:-63577912 | Msa0263840:CDS |
| CAAATGTCACCTCCACAAAC+TGG | 0.453285 | 2_2:+63577988 | None:intergenic |
| CTTGAGGTGGATTTCTCTCA+TGG | 0.456181 | 2_2:-63577253 | Msa0263840:three_prime_UTR |
| GGATTTCAAGCTGCACCTAA+AGG | 0.456483 | 2_2:-63577385 | Msa0263840:CDS |
| TATTGGGAAGTTTGGATTGT+CGG | 0.456601 | 2_2:-63577685 | Msa0263840:CDS |
| TAGCCGAGGCATTGAATGAA+TGG | 0.457369 | 2_2:-63577518 | Msa0263840:CDS |
| AAAGGATGAGAGCAGCTATT+GGG | 0.460692 | 2_2:-63577701 | Msa0263840:CDS |
| TTTCTGGTGGATGGAGAATG+AGG | 0.462028 | 2_2:-63579183 | Msa0263840:CDS |
| CAGCAAGTGAGGCTGTCTAT+AGG | 0.465288 | 2_2:+63577590 | None:intergenic |
| ACCCTGGAAATGAGGAAGAA+AGG | 0.466407 | 2_2:-63577719 | Msa0263840:CDS |
| GTGCTCTTCCCAGCTCCATT+GGG | 0.466440 | 2_2:+63577888 | None:intergenic |
| TTGTTCCCATCCTCTCTCTA+GGG | 0.473216 | 2_2:-63581080 | Msa0263840:CDS |
| GAGAAAGAAGCTGAAATTCT+GGG | 0.473580 | 2_2:-63579446 | Msa0263840:CDS |
| TTTGGTTCCTTTAGATGGCA+TGG | 0.476128 | 2_2:-63577841 | Msa0263840:CDS |
| TCAGGTGGCCCATGAGATAT+GGG | 0.476686 | 2_2:-63577451 | Msa0263840:CDS |
| AGGCTTCAATTTCCCGGCTA+AGG | 0.478428 | 2_2:+63579525 | None:intergenic |
| TGATAAATATCCATGTGGTC+TGG | 0.478691 | 2_2:+63579548 | None:intergenic |
| TCTTCTCTTTACTCTGAGCT+TGG | 0.478713 | 2_2:+63578114 | None:intergenic |
| AGCTGAAATTCTGGGAGCAC+AGG | 0.481031 | 2_2:-63579438 | Msa0263840:intron |
| AGCTATAGAACATGCGAACC+TGG | 0.483922 | 2_2:+63581369 | None:intergenic |
| TTTAGACTCCAGGATTGCTC+TGG | 0.486928 | 2_2:-63577916 | Msa0263840:CDS |
| GAATATCCCTAGAGAGAGGA+TGG | 0.495874 | 2_2:+63581074 | None:intergenic |
| CAAGCTGCACCTAAAGGAAA+AGG | 0.496432 | 2_2:-63577379 | Msa0263840:CDS |
| TCGGGGTCGATTTAGACTCC+AGG | 0.496794 | 2_2:-63577926 | Msa0263840:CDS |
| TTTGGAAGCATGTGTGTGGC+TGG | 0.497037 | 2_2:-63578396 | Msa0263840:CDS |
| TGGTTTCAACAAGCAGATGC+AGG | 0.504046 | 2_2:-63579224 | Msa0263840:CDS |
| TCCATGCAGACGATTGAAGA+TGG | 0.506940 | 2_2:-63581278 | Msa0263840:intron |
| AGAACCAGATGAAGCAGTAC+AGG | 0.507231 | 2_2:-63578211 | Msa0263840:CDS |
| TTGCTTGGATTGAACGGCTG+TGG | 0.511780 | 2_2:-63579617 | Msa0263840:CDS |
| ATTGCTCTGGTTGGACCCAA+TGG | 0.513877 | 2_2:-63577903 | Msa0263840:CDS |
| TCATTAGTTGTGACGAGGAA+AGG | 0.515894 | 2_2:-63579478 | Msa0263840:CDS |
| CGACGAACCATGCCATCTAA+AGG | 0.517489 | 2_2:+63577834 | None:intergenic |
| GTGAAATCACAACCAAAATA+CGG | 0.518081 | 2_2:+63578351 | None:intergenic |
| AGGTTCATCAAGTAGAAGAA+TGG | 0.518332 | 2_2:+63579126 | None:intergenic |
| GACACCATTAAGGAAATCTT+GGG | 0.522650 | 2_2:+63578325 | None:intergenic |
| TCTAATAGTTGATTCTGAGT+TGG | 0.522759 | 2_2:-63579774 | Msa0263840:CDS |
| CCCTCCTCTCTTTGCAGCGG+CGG | 0.522773 | 2_2:+63581213 | None:intergenic |
| ATCCCATTCATTCAATGCCT+CGG | 0.523753 | 2_2:+63577515 | None:intergenic |
| GAAATATTACCTACCTCTGA+AGG | 0.526085 | 2_2:+63579946 | None:intergenic |
| GAAGCAGTACAGGTGGGAGC+AGG | 0.526521 | 2_2:-63578201 | Msa0263840:CDS |
| TGGATTGTCGGGTAAAGCAC+AGG | 0.529724 | 2_2:-63577673 | Msa0263840:CDS |
| AGCCGAGGCATTGAATGAAT+GGG | 0.531518 | 2_2:-63577517 | Msa0263840:CDS |
| TTATTTATGTTCCAGGAGGA+TGG | 0.532051 | 2_2:-63579340 | Msa0263840:intron |
| TCATCAAGTAGAAGAATGGT+TGG | 0.533303 | 2_2:+63579130 | None:intergenic |
| GCGGGTTTATCTGACTGAAA+AGG | 0.536897 | 2_2:-63577357 | Msa0263840:exon |
| GAATTTGGAACGTGAGAAGA+AGG | 0.537560 | 2_2:+63581391 | None:intergenic |
| CAGCACACACCCATATCTCA+TGG | 0.540856 | 2_2:+63577442 | None:intergenic |
| GCCGCCGCTGCAAAGAGAGG+AGG | 0.541617 | 2_2:-63581214 | Msa0263840:CDS |
| ATCTACAAGAACATTGACTT+CGG | 0.541734 | 2_2:-63577945 | Msa0263840:CDS |
| AACAAATATTACAGAGGTGA+CGG | 0.543594 | 2_2:+63577158 | None:intergenic |
| AGCCTCTGACATGTCTGCGT+TGG | 0.547223 | 2_2:-63579507 | Msa0263840:CDS |
| CAACTATTAGATCATGTCCA+TGG | 0.547850 | 2_2:+63579786 | None:intergenic |
| AAAAGAGTACCCTGGAAATG+AGG | 0.547885 | 2_2:-63577727 | Msa0263840:CDS |
| TATGGTTTGCTTGGATTGAA+CGG | 0.549563 | 2_2:-63579623 | Msa0263840:CDS |
| ACCTGTTCTCCAGTTTGTGG+AGG | 0.551730 | 2_2:-63577997 | Msa0263840:CDS |
| CATCAAGTAGAAGAATGGTT+GGG | 0.553770 | 2_2:+63579131 | None:intergenic |
| GCTGCCGCCGCTGCAAAGAG+AGG | 0.556803 | 2_2:-63581217 | Msa0263840:CDS |
| ATATCTGATCGGACATGCAC+GGG | 0.557255 | 2_2:-63581109 | Msa0263840:CDS |
| GGAGCAGATTGCCTCAATGA+AGG | 0.557274 | 2_2:-63578180 | Msa0263840:CDS |
| TGGTTGGACCCAATGGAGCT+GGG | 0.558985 | 2_2:-63577896 | Msa0263840:CDS |
| TGCAATGTATTCCTTCATTG+AGG | 0.559633 | 2_2:+63578169 | None:intergenic |
| CCATTATCAATGTATCATGT+TGG | 0.560306 | 2_2:+63577090 | None:intergenic |
| GTGTTGCTAGCTGCTTGAGG+TGG | 0.560811 | 2_2:-63577266 | Msa0263840:three_prime_UTR |
| CCAACCTACATTGTAATACA+AGG | 0.560880 | 2_2:+63577288 | None:intergenic |
| CCGCCGCTGCAAAGAGAGGA+GGG | 0.562371 | 2_2:-63581213 | Msa0263840:CDS |
| AAAGGCGTCGGAGAAGGCGG+TGG | 0.562809 | 2_2:-63581164 | Msa0263840:CDS |
| AGTTGGAGCTAAATTATGGA+AGG | 0.564374 | 2_2:-63579757 | Msa0263840:intron |
| ACCAGATGAAGCAGTACAGG+TGG | 0.568916 | 2_2:-63578208 | Msa0263840:CDS |
| ACGTTCCTGAAGCTTATGAC+AGG | 0.572055 | 2_2:-63577867 | Msa0263840:CDS |
| CGCTGCAAAGAGAGGAGGGA+AGG | 0.574075 | 2_2:-63581209 | Msa0263840:CDS |
| CTGATCAAACAGTGACCAGA+TGG | 0.574106 | 2_2:-63577422 | Msa0263840:CDS |
| CCTATGAGAAATTTATCGGA+TGG | 0.574573 | 2_2:-63577645 | Msa0263840:CDS |
| GGATATTTATCACCTTAGCC+GGG | 0.580006 | 2_2:-63579537 | Msa0263840:CDS |
| GATATCTGATCGGACATGCA+CGG | 0.582650 | 2_2:-63581110 | Msa0263840:CDS |
| CACAAACTGGAGAACAGGTG+GGG | 0.584349 | 2_2:+63578001 | None:intergenic |
| TCCACAAACTGGAGAACAGG+TGG | 0.586563 | 2_2:+63577999 | None:intergenic |
| ATGTTCCAGGAGGATGGTGG+TGG | 0.591374 | 2_2:-63579334 | Msa0263840:intron |
| TACATTGCACGATTTGGCCA+TGG | 0.600697 | 2_2:-63578155 | Msa0263840:CDS |
| TTTATGTTCCAGGAGGATGG+TGG | 0.602285 | 2_2:-63579337 | Msa0263840:intron |
| TCTGTTTATGAATCCTTCAG+AGG | 0.604197 | 2_2:-63579959 | Msa0263840:intron |
| CCACAAACTGGAGAACAGGT+GGG | 0.611917 | 2_2:+63578000 | None:intergenic |
| GAATGAATGGGATGGTGGCA+TGG | 0.612616 | 2_2:-63577505 | Msa0263840:CDS |
| CTGCACCTAAAGGAAAAGGC+GGG | 0.612988 | 2_2:-63577375 | Msa0263840:CDS |
| GAAATTTATCGGATGGACAA+AGG | 0.614374 | 2_2:-63577638 | Msa0263840:CDS |
| CCTTGTATTACAATGTAGGT+TGG | 0.614457 | 2_2:-63577288 | Msa0263840:three_prime_UTR |
| TCATCTAATAGCAGCAAGTG+AGG | 0.614956 | 2_2:+63577579 | None:intergenic |
| GCGCGGTGGACTTACAGAGA+AGG | 0.616834 | 2_2:-63578075 | Msa0263840:CDS |
| TAGATTTGGAAGCATGTGTG+TGG | 0.617264 | 2_2:-63578400 | Msa0263840:CDS |
| TAGTGTTGCTAACGGAATTG+GGG | 0.617899 | 2_2:-63581140 | Msa0263840:CDS |
| ATAAAGAGTAAAGGAGCCAG+AGG | 0.619651 | 2_2:+63577014 | None:intergenic |
| GAATCAGACATAGAAATCAC+CGG | 0.620043 | 2_2:-63577207 | Msa0263840:three_prime_UTR |
| TTGGTGTTGCTAGCTGCTTG+AGG | 0.622629 | 2_2:-63577269 | Msa0263840:three_prime_UTR |
| GCTTCCTATTCCAGACCACA+TGG | 0.623990 | 2_2:-63579558 | Msa0263840:CDS |
| GCTGCACCTAAAGGAAAAGG+CGG | 0.625202 | 2_2:-63577376 | Msa0263840:CDS |
| ACAAACTGGAGAACAGGTGG+GGG | 0.628419 | 2_2:+63578002 | None:intergenic |
| AGCACACACCCATATCTCAT+GGG | 0.630239 | 2_2:+63577443 | None:intergenic |
| CAAACAGTGACCAGATGGGA+AGG | 0.631024 | 2_2:-63577417 | Msa0263840:CDS |
| AATATCCCTAGAGAGAGGAT+GGG | 0.632152 | 2_2:+63581075 | None:intergenic |
| GACAATTGACTCGTTAGCCG+AGG | 0.636847 | 2_2:-63577532 | Msa0263840:CDS |
| CGGTGGACTTACAGAGAAGG+TGG | 0.640373 | 2_2:-63578072 | Msa0263840:CDS |
| GGGATATTCAGATATCTGAT+CGG | 0.640506 | 2_2:-63581120 | Msa0263840:CDS |
| GATGAACCTACAAATCACCT+TGG | 0.641091 | 2_2:-63579112 | Msa0263840:intron |
| GGAGTCGCGTGATCTTTGCA+TGG | 0.644084 | 2_2:-63577617 | Msa0263840:CDS |
| GGTGAAATTGTGCAATGCGA+AGG | 0.646343 | 2_2:+63577802 | None:intergenic |
| GATCTTGTGCAGTGGTGATG+AGG | 0.647357 | 2_2:+63581418 | None:intergenic |
| TGATCAAACAGTGACCAGAT+GGG | 0.653848 | 2_2:-63577421 | Msa0263840:CDS |
| CTACAAGAACATTGACTTCG+GGG | 0.653950 | 2_2:-63577943 | Msa0263840:CDS |
| CTTCCCTCCTCTCTTTGCAG+CGG | 0.655854 | 2_2:+63581210 | None:intergenic |
| ACCTGAATATCCCTAGAGAG+AGG | 0.657445 | 2_2:+63581070 | None:intergenic |
| GGCTGTCATTAGTTGTGACG+AGG | 0.658773 | 2_2:-63579483 | Msa0263840:CDS |
| CCAGATGAAGCAGTACAGGT+GGG | 0.659061 | 2_2:-63578207 | Msa0263840:CDS |
| GCGGTGGATAGTGTTGCTAA+CGG | 0.662681 | 2_2:-63581148 | Msa0263840:CDS |
| AAGGCAGCGTCTGTGATGCG+CGG | 0.666375 | 2_2:-63577338 | Msa0263840:three_prime_UTR |
| AAGGTATAGATCTTGTGCAG+TGG | 0.669933 | 2_2:+63581410 | None:intergenic |
| CTCCAACGCAGACATGTCAG+AGG | 0.671580 | 2_2:+63579505 | None:intergenic |
| GCATTGAATGAATGGGATGG+TGG | 0.687430 | 2_2:-63577510 | Msa0263840:CDS |
| TTTATGATAAAAGAGTACCC+TGG | 0.697631 | 2_2:-63577735 | Msa0263840:CDS |
| GAGGCATTGAATGAATGGGA+TGG | 0.699572 | 2_2:-63577513 | Msa0263840:CDS |
| GGAAGCATGTGTGTGGCTGG+AGG | 0.706083 | 2_2:-63578393 | Msa0263840:CDS |
| AATGGTTGGGTTCATAAACA+GGG | 0.707136 | 2_2:+63579144 | None:intergenic |
| TAAGGTGATAAATATCCATG+TGG | 0.717137 | 2_2:+63579543 | None:intergenic |
| GGTCTGGAATAGGAAGCTCA+CGG | 0.726335 | 2_2:+63579564 | None:intergenic |
| GTTTCCCCACATCAACAAAG+CGG | 0.731629 | 2_2:+63578027 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTTAATTAATTGTTATT+CGG | - | chr2_2:63577557-63577576 | Msa0263840:CDS | 10.0% |
| !! | ATAATAAATATTTGTAGATT+TGG | - | chr2_2:63580143-63580162 | Msa0263840:intron | 10.0% |
| !!! | GTTATTGATTAGTTTAATTT+TGG | - | chr2_2:63577527-63577546 | Msa0263840:CDS | 15.0% |
| !!! | AAAAAAACTAACACAATTTT+TGG | + | chr2_2:63577798-63577817 | None:intergenic | 15.0% |
| !!! | GACTTTTATTAACAAAATTA+CGG | - | chr2_2:63577865-63577884 | Msa0263840:CDS | 15.0% |
| !!! | ACTTTTATTAACAAAATTAC+GGG | - | chr2_2:63577866-63577885 | Msa0263840:CDS | 15.0% |
| !!! | TCAAAATCAATTTTTGTATT+AGG | - | chr2_2:63578232-63578251 | Msa0263840:CDS | 15.0% |
| !! | TAATAATTAATTGAGAATCT+GGG | + | chr2_2:63578417-63578436 | None:intergenic | 15.0% |
| !! | TTAATAATTAATTGAGAATC+TGG | + | chr2_2:63578418-63578437 | None:intergenic | 15.0% |
| !!! | AATTATTAATCCCATATTTT+CGG | - | chr2_2:63578429-63578448 | Msa0263840:intron | 15.0% |
| !! | TTCAATATTGAACAATAAAA+AGG | - | chr2_2:63578631-63578650 | Msa0263840:intron | 15.0% |
| !! | GACAATTAAATGTATTTATA+TGG | + | chr2_2:63578666-63578685 | None:intergenic | 15.0% |
| !! | TTTCTTACTATAATATTTGT+TGG | - | chr2_2:63578878-63578897 | Msa0263840:intron | 15.0% |
| !!! | TACATTAACATCTAATTTTA+TGG | - | chr2_2:63579896-63579915 | Msa0263840:intron | 15.0% |
| !! | ATTAAAAACAAATATTACAG+AGG | + | chr2_2:63581408-63581427 | None:intergenic | 15.0% |
| !! | TTTGTTCTTTATGTTATGTA+TGG | - | chr2_2:63577597-63577616 | Msa0263840:CDS | 20.0% |
| !!! | AGCTTTTTTTTTTTTTGGAA+TGG | + | chr2_2:63577990-63578009 | None:intergenic | 20.0% |
| !!! | AGAGAAGCTTTTTTTTTTTT+TGG | + | chr2_2:63577995-63578014 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGCTTCTCTTTTA+AGG | - | chr2_2:63577999-63578018 | Msa0263840:CDS | 20.0% |
| !!! | ACACTTCAAATTATTTTTCA+TGG | + | chr2_2:63578207-63578226 | None:intergenic | 20.0% |
| !! | AGAATTATGTTGAAATTTGA+AGG | + | chr2_2:63578297-63578316 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTGAAAATGATC+TGG | - | chr2_2:63578325-63578344 | Msa0263840:CDS | 20.0% |
| !! | TAAGTCAGAAGATATAAATA+TGG | + | chr2_2:63578841-63578860 | None:intergenic | 20.0% |
| !! | GAACATAAATAAATAAAGTG+TGG | + | chr2_2:63579209-63579228 | None:intergenic | 20.0% |
| !!! | ACTTTATTTATTTATGTTCC+AGG | - | chr2_2:63579210-63579229 | Msa0263840:CDS | 20.0% |
| !!! | ATTAACATCTAATTTTATGG+AGG | - | chr2_2:63579899-63579918 | Msa0263840:intron | 20.0% |
| !! | GTGAATATAATCAAATGAAA+TGG | - | chr2_2:63581326-63581345 | Msa0263840:intron | 20.0% |
| !! | ATTTATGATGCTTATCAATT+TGG | - | chr2_2:63581429-63581448 | Msa0263840:five_prime_UTR | 20.0% |
| ! | TTTCAACTTAATGATCATGT+AGG | + | chr2_2:63577250-63577269 | None:intergenic | 25.0% |
| ! | TCTATGACTTGAGTTTATAA+AGG | + | chr2_2:63577847-63577866 | None:intergenic | 25.0% |
| !! | ACTGTTTTCATAATCTATTC+TGG | - | chr2_2:63578027-63578046 | Msa0263840:CDS | 25.0% |
| ! | CAGTCATAATAATCAGAATT+AGG | + | chr2_2:63578176-63578195 | None:intergenic | 25.0% |
| ! | TTTCAACATAATTCTTGTCT+TGG | - | chr2_2:63578302-63578321 | Msa0263840:CDS | 25.0% |
| !!! | ATAAACAGAGATTTTGACAT+GGG | + | chr2_2:63578587-63578606 | None:intergenic | 25.0% |
| !! | GTTGTATTCTATTGACATTT+TGG | - | chr2_2:63578707-63578726 | Msa0263840:intron | 25.0% |
| ! | ATATCTTCTGACTTATGAAT+AGG | - | chr2_2:63578846-63578865 | Msa0263840:intron | 25.0% |
| !!! | TAACTTATTTTCAGACGTTA+TGG | - | chr2_2:63578916-63578935 | Msa0263840:intron | 25.0% |
| ! | TTATTTATTTATGTTCCAGG+AGG | - | chr2_2:63579213-63579232 | Msa0263840:CDS | 25.0% |
| !! | AATGAAAGAGTTACTCTTTT+CGG | + | chr2_2:63579483-63579502 | None:intergenic | 25.0% |
| !!! | TTTTTTAATTGAAGGTCACA+TGG | - | chr2_2:63579585-63579604 | Msa0263840:CDS | 25.0% |
| !!! | TTTTTAATTGAAGGTCACAT+GGG | - | chr2_2:63579586-63579605 | Msa0263840:CDS | 25.0% |
| ! | GTATGCTTTGATAAAACATT+TGG | - | chr2_2:63579731-63579750 | Msa0263840:intron | 25.0% |
| !! | AAAGCATCATCATAACTAAA+AGG | + | chr2_2:63579982-63580001 | None:intergenic | 25.0% |
| ! | TCAGACTAAATTCAATGTAT+TGG | - | chr2_2:63580001-63580020 | Msa0263840:intron | 25.0% |
| ! | AAAACATTGCAAGATATGAA+GGG | + | chr2_2:63580039-63580058 | None:intergenic | 25.0% |
| ! | AAAAACATTGCAAGATATGA+AGG | + | chr2_2:63580040-63580059 | None:intergenic | 25.0% |
| ! | TCGATATCTAAATGATTAGT+TGG | + | chr2_2:63581005-63581024 | None:intergenic | 25.0% |
| ! | AGCTCAAAAAATAATTAAGC+CGG | + | chr2_2:63581372-63581391 | None:intergenic | 25.0% |
| !! | TGGATGATTAGTTCTTTTGT+AGG | - | chr2_2:63577617-63577636 | Msa0263840:CDS | 30.0% |
| !! | GGATGATTAGTTCTTTTGTA+GGG | - | chr2_2:63577618-63577637 | Msa0263840:CDS | 30.0% |
| ! | AACAATGAACAGAGTTGATT+TGG | - | chr2_2:63577688-63577707 | Msa0263840:CDS | 30.0% |
| !!! | AATTTTTGGTGCTGAAAAAC+GGG | + | chr2_2:63577784-63577803 | None:intergenic | 30.0% |
| !!! | CAATTTTTGGTGCTGAAAAA+CGG | + | chr2_2:63577785-63577804 | None:intergenic | 30.0% |
| TAAGTGCTTATGCTATAATC+TGG | + | chr2_2:63577915-63577934 | None:intergenic | 30.0% | |
| TTTCATAAGTTCTTACCGAA+CGG | - | chr2_2:63578077-63578096 | Msa0263840:CDS | 30.0% | |
| GTTTGAAAAATTACCACCAA+GGG | + | chr2_2:63578154-63578173 | None:intergenic | 30.0% | |
| CATATATTGCATTGTATCTC+TGG | - | chr2_2:63578365-63578384 | Msa0263840:CDS | 30.0% | |
| TAAATTATTGTAGCTAGCGT+GGG | - | chr2_2:63578495-63578514 | Msa0263840:intron | 30.0% | |
| !! | CATAAACAGAGATTTTGACA+TGG | + | chr2_2:63578588-63578607 | None:intergenic | 30.0% |
| ! | TCTTTATCAGTTACTTTCCA+TGG | - | chr2_2:63578754-63578773 | Msa0263840:intron | 30.0% |
| ! | TCTAATAGTTGATTCTGAGT+TGG | - | chr2_2:63578783-63578802 | Msa0263840:intron | 30.0% |
| TAAGGTGATAAATATCCATG+TGG | + | chr2_2:63579017-63579036 | None:intergenic | 30.0% | |
| !! | GCTGAAATTTTATTTGGTCT+TGG | - | chr2_2:63579313-63579332 | Msa0263840:CDS | 30.0% |
| ! | ATGAAAGAGTTACTCTTTTC+GGG | + | chr2_2:63579482-63579501 | None:intergenic | 30.0% |
| TCAATGCATAAAACATGACA+AGG | + | chr2_2:63579528-63579547 | None:intergenic | 30.0% | |
| !!! | GACTCGTGTTTTTTAATTGA+AGG | - | chr2_2:63579577-63579596 | Msa0263840:CDS | 30.0% |
| ATCCATGTCTTATACTTGAT+AGG | + | chr2_2:63579637-63579656 | None:intergenic | 30.0% | |
| !! | TGCTTTGAGTAAAGTTTTCT+TGG | - | chr2_2:63579707-63579726 | Msa0263840:intron | 30.0% |
| TTTGATGCTTTGTATCATCA+TGG | - | chr2_2:63579785-63579804 | Msa0263840:CDS | 30.0% | |
| TTGATGCTTTGTATCATCAT+GGG | - | chr2_2:63579786-63579805 | Msa0263840:CDS | 30.0% | |
| AAATAGAAGATGCAAGTGAA+TGG | + | chr2_2:63579842-63579861 | None:intergenic | 30.0% | |
| ! | ATATAGTCTTGGGTAGTTAT+CGG | - | chr2_2:63579951-63579970 | Msa0263840:intron | 30.0% |
| TGTCCTTATAGTCTAATCTT+TGG | - | chr2_2:63580082-63580101 | Msa0263840:intron | 30.0% | |
| ! | GAAGAAATTTGACCGTATTT+TGG | - | chr2_2:63580194-63580213 | Msa0263840:intron | 30.0% |
| GTGAAATCACAACCAAAATA+CGG | + | chr2_2:63580209-63580228 | None:intergenic | 30.0% | |
| AAAAAGCTGAAGTTCTATAC+TGG | - | chr2_2:63580282-63580301 | Msa0263840:intron | 30.0% | |
| TTCTTGTAGATGAGATTATC+AGG | + | chr2_2:63580603-63580622 | None:intergenic | 30.0% | |
| !! | ATCTACAAGAACATTGACTT+CGG | - | chr2_2:63580612-63580631 | Msa0263840:intron | 30.0% |
| ! | GGTACTCTTTTATCATAAAC+TGG | + | chr2_2:63580821-63580840 | None:intergenic | 30.0% |
| !! | TTTATGATAAAAGAGTACCC+TGG | - | chr2_2:63580822-63580841 | Msa0263840:intron | 30.0% |
| GATGCCTATGAGAAATTTAT+CGG | - | chr2_2:63580908-63580927 | Msa0263840:intron | 30.0% | |
| !! | TTCTGGTTAGTCATGATTTT+AGG | - | chr2_2:63581075-63581094 | Msa0263840:CDS | 30.0% |
| ! | TGATTTTAGGCTCATAAATC+AGG | - | chr2_2:63581088-63581107 | Msa0263840:CDS | 30.0% |
| ATGACCTTGTATTACAATGT+AGG | - | chr2_2:63581265-63581284 | Msa0263840:exon | 30.0% | |
| AACAAATATTACAGAGGTGA+CGG | + | chr2_2:63581402-63581421 | None:intergenic | 30.0% | |
| CCATTATCAATGTATCATGT+TGG | + | chr2_2:63581470-63581489 | None:intergenic | 30.0% | |
| CCAACATGATACATTGATAA+TGG | - | chr2_2:63581467-63581486 | Msa0263840:five_prime_UTR | 30.0% | |
| !! | AGGTTTGGTTTGGTATATAG+AGG | + | chr2_2:63577070-63577089 | None:intergenic | 35.0% |
| !! | TTTCTTCGTTTTTGTTGAGG+TGG | + | chr2_2:63577095-63577114 | None:intergenic | 35.0% |
| !! | CGATTTCTTCGTTTTTGTTG+AGG | + | chr2_2:63577098-63577117 | None:intergenic | 35.0% |
| AAACGCGCGTTTAAATTAAG+CGG | + | chr2_2:63577220-63577239 | None:intergenic | 35.0% | |
| ! | ATAGTGTTGCTAACGGAATT+GGG | - | chr2_2:63577416-63577435 | Msa0263840:CDS | 35.0% |
| GGGATATTCAGATATCTGAT+CGG | - | chr2_2:63577437-63577456 | Msa0263840:CDS | 35.0% | |
| ! | TCCGAAGAGTGAAATCATTT+TGG | - | chr2_2:63577735-63577754 | Msa0263840:CDS | 35.0% |
| GCCAAAATGATTTCACTCTT+CGG | + | chr2_2:63577739-63577758 | None:intergenic | 35.0% | |
| GCGTTACATTTATCCAATCA+GGG | + | chr2_2:63577761-63577780 | None:intergenic | 35.0% | |
| !!! | ATTTTTGGTGCTGAAAAACG+GGG | + | chr2_2:63577783-63577802 | None:intergenic | 35.0% |
| TTCATAAGTTCTTACCGAAC+GGG | - | chr2_2:63578078-63578097 | Msa0263840:CDS | 35.0% | |
| TAAGCACTTATAAACCCGTT+CGG | + | chr2_2:63578095-63578114 | None:intergenic | 35.0% | |
| GGTTTGAAAAATTACCACCA+AGG | + | chr2_2:63578155-63578174 | None:intergenic | 35.0% | |
| GTTGAAATTTGAAGGACACA+AGG | + | chr2_2:63578289-63578308 | None:intergenic | 35.0% | |
| TCTGGAAAAAAAGAGAGAAC+TGG | - | chr2_2:63578383-63578402 | Msa0263840:CDS | 35.0% | |
| CTAAATTATTGTAGCTAGCG+TGG | - | chr2_2:63578494-63578513 | Msa0263840:intron | 35.0% | |
| TCTGTTTATGAATCCTTCAG+AGG | - | chr2_2:63578598-63578617 | Msa0263840:intron | 35.0% | |
| TTTATGAATCCTTCAGAGGT+AGG | - | chr2_2:63578602-63578621 | Msa0263840:intron | 35.0% | |
| GAAATATTACCTACCTCTGA+AGG | + | chr2_2:63578614-63578633 | None:intergenic | 35.0% | |
| CAACTATTAGATCATGTCCA+TGG | + | chr2_2:63578774-63578793 | None:intergenic | 35.0% | |
| ! | TCTGAGTTGGAGCTAAATTA+TGG | - | chr2_2:63578796-63578815 | Msa0263840:intron | 35.0% |
| AGTTGGAGCTAAATTATGGA+AGG | - | chr2_2:63578800-63578819 | Msa0263840:intron | 35.0% | |
| !! | TATGGTTTGCTTGGATTGAA+CGG | - | chr2_2:63578934-63578953 | Msa0263840:intron | 35.0% |
| TGATAAATATCCATGTGGTC+TGG | + | chr2_2:63579012-63579031 | None:intergenic | 35.0% | |
| TGGATATTTATCACCTTAGC+CGG | - | chr2_2:63579019-63579038 | Msa0263840:intron | 35.0% | |
| GAGAAAGAAGCTGAAATTCT+GGG | - | chr2_2:63579111-63579130 | Msa0263840:intron | 35.0% | |
| CCGTAAAAGCAAAACAACTT+GGG | + | chr2_2:63579180-63579199 | None:intergenic | 35.0% | |
| !! | CCCAAGTTGTTTTGCTTTTA+CGG | - | chr2_2:63579177-63579196 | Msa0263840:CDS | 35.0% |
| TCCGTAAAAGCAAAACAACT+TGG | + | chr2_2:63579181-63579200 | None:intergenic | 35.0% | |
| TTATTTATGTTCCAGGAGGA+TGG | - | chr2_2:63579217-63579236 | Msa0263840:CDS | 35.0% | |
| ! | CACTTGAACGAGTTTTTGAA+CGG | - | chr2_2:63579251-63579270 | Msa0263840:CDS | 35.0% |
| !! | CGTGCTGCTGAAATTTTATT+TGG | - | chr2_2:63579307-63579326 | Msa0263840:CDS | 35.0% |
| ! | AAGAAGACACGTGATTTTTC+TGG | - | chr2_2:63579358-63579377 | Msa0263840:intron | 35.0% |
| AATGGTTGGGTTCATAAACA+GGG | + | chr2_2:63579416-63579435 | None:intergenic | 35.0% | |
| CATCAAGTAGAAGAATGGTT+GGG | + | chr2_2:63579429-63579448 | None:intergenic | 35.0% | |
| TCATCAAGTAGAAGAATGGT+TGG | + | chr2_2:63579430-63579449 | None:intergenic | 35.0% | |
| AGGTTCATCAAGTAGAAGAA+TGG | + | chr2_2:63579434-63579453 | None:intergenic | 35.0% | |
| ! | TGAAAGAGTTACTCTTTTCG+GGG | + | chr2_2:63579481-63579500 | None:intergenic | 35.0% |
| TGCCTATCAAGTATAAGACA+TGG | - | chr2_2:63579632-63579651 | Msa0263840:intron | 35.0% | |
| CGAACAAACTAGAACTAGAA+GGG | + | chr2_2:63579669-63579688 | None:intergenic | 35.0% | |
| ACGAACAAACTAGAACTAGA+AGG | + | chr2_2:63579670-63579689 | None:intergenic | 35.0% | |
| !! | TCTAGTTCTAGTTTGTTCGT+TGG | - | chr2_2:63579670-63579689 | Msa0263840:intron | 35.0% |
| !! | CTAGTTCTAGTTTGTTCGTT+GGG | - | chr2_2:63579671-63579690 | Msa0263840:intron | 35.0% |
| CTTTACTCAAAGCAACATAG+AGG | + | chr2_2:63579701-63579720 | None:intergenic | 35.0% | |
| GCTTTGATAAAACATTTGGC+AGG | - | chr2_2:63579735-63579754 | Msa0263840:intron | 35.0% | |
| TTCGTACTCTGATATAGTCT+TGG | - | chr2_2:63579940-63579959 | Msa0263840:intron | 35.0% | |
| TCGTACTCTGATATAGTCTT+GGG | - | chr2_2:63579941-63579960 | Msa0263840:intron | 35.0% | |
| CGACCAAAGATTAGACTATA+AGG | + | chr2_2:63580088-63580107 | None:intergenic | 35.0% | |
| TTTGGTCGTATATCATAGCT+GGG | - | chr2_2:63580100-63580119 | Msa0263840:intron | 35.0% | |
| GACACCATTAAGGAAATCTT+GGG | + | chr2_2:63580235-63580254 | None:intergenic | 35.0% | |
| AGACACCATTAAGGAAATCT+TGG | + | chr2_2:63580236-63580255 | None:intergenic | 35.0% | |
| TATTTGTGCAGACACCATTA+AGG | + | chr2_2:63580245-63580264 | None:intergenic | 35.0% | |
| !!! | TCAGCTTTTTGTTTTGCATG+TGG | + | chr2_2:63580272-63580291 | None:intergenic | 35.0% |
| TGCAATGTATTCCTTCATTG+AGG | + | chr2_2:63580391-63580410 | None:intergenic | 35.0% | |
| AAGGAATACATTGCACGATT+TGG | - | chr2_2:63580396-63580415 | Msa0263840:intron | 35.0% | |
| AGAGAAGACTCTTGCAAAAA+TGG | - | chr2_2:63580458-63580477 | Msa0263840:intron | 35.0% | |
| !! | TCTACAAGAACATTGACTTC+GGG | - | chr2_2:63580613-63580632 | Msa0263840:intron | 35.0% |
| CTTGACTGAAAAACTAGACT+TGG | - | chr2_2:63580782-63580801 | Msa0263840:intron | 35.0% | |
| TATTGGGAAGTTTGGATTGT+CGG | - | chr2_2:63580872-63580891 | Msa0263840:intron | 35.0% | |
| CCATCCGATAAATTTCTCAT+AGG | + | chr2_2:63580915-63580934 | None:intergenic | 35.0% | |
| CCTATGAGAAATTTATCGGA+TGG | - | chr2_2:63580912-63580931 | Msa0263840:intron | 35.0% | |
| GAAATTTATCGGATGGACAA+AGG | - | chr2_2:63580919-63580938 | Msa0263840:intron | 35.0% | |
| ! | TTTTAGGCTCATAAATCAGG+TGG | - | chr2_2:63581091-63581110 | Msa0263840:CDS | 35.0% |
| ! | GGTCATAATCGTGACATTTT+GGG | + | chr2_2:63581251-63581270 | None:intergenic | 35.0% |
| ! | AGGTCATAATCGTGACATTT+TGG | + | chr2_2:63581252-63581271 | None:intergenic | 35.0% |
| CCAACCTACATTGTAATACA+AGG | + | chr2_2:63581272-63581291 | None:intergenic | 35.0% | |
| CCTTGTATTACAATGTAGGT+TGG | - | chr2_2:63581269-63581288 | Msa0263840:exon | 35.0% | |
| GAATCAGACATAGAAATCAC+CGG | - | chr2_2:63581350-63581369 | Msa0263840:intron | 35.0% | |
| TGCTTATCAATTTGGTTGCT+TGG | - | chr2_2:63581437-63581456 | Msa0263840:five_prime_UTR | 35.0% | |
| ATTGTAGTACTTGTTTCCTC+TGG | - | chr2_2:63581527-63581546 | Msa0263840:five_prime_UTR | 35.0% | |
| AAGGTATAGATCTTGTGCAG+TGG | + | chr2_2:63577150-63577169 | None:intergenic | 40.0% | |
| ! | GAATTTGGAACGTGAGAAGA+AGG | + | chr2_2:63577169-63577188 | None:intergenic | 40.0% |
| GAAAAAAGCTGCTCAGAAGA+AGG | - | chr2_2:63577318-63577337 | Msa0263840:three_prime_UTR | 40.0% | |
| ! | GATAGTGTTGCTAACGGAAT+TGG | - | chr2_2:63577415-63577434 | Msa0263840:CDS | 40.0% |
| ! | TAGTGTTGCTAACGGAATTG+GGG | - | chr2_2:63577417-63577436 | Msa0263840:CDS | 40.0% |
| AATATCCCTAGAGAGAGGAT+GGG | + | chr2_2:63577485-63577504 | None:intergenic | 40.0% | |
| !! | GAAATCATTTTGGCCCTGAT+TGG | - | chr2_2:63577745-63577764 | Msa0263840:CDS | 40.0% |
| GGCGTTACATTTATCCAATC+AGG | + | chr2_2:63577762-63577781 | None:intergenic | 40.0% | |
| ! | AATCCCATATTTTCGGACAC+TGG | - | chr2_2:63578436-63578455 | Msa0263840:intron | 40.0% |
| ATGCCAGTGTCCGAAAATAT+GGG | + | chr2_2:63578442-63578461 | None:intergenic | 40.0% | |
| TATGCCAGTGTCCGAAAATA+TGG | + | chr2_2:63578443-63578462 | None:intergenic | 40.0% | |
| !! | AGATTTTGACATGGGCTACA+TGG | + | chr2_2:63578579-63578598 | None:intergenic | 40.0% |
| !! | TTCAGACGTTATGGTTTGCT+TGG | - | chr2_2:63578925-63578944 | Msa0263840:intron | 40.0% |
| TCTACGCTACTTACAGCAAT+AGG | - | chr2_2:63578967-63578986 | Msa0263840:intron | 40.0% | |
| ! | ATATCCATGTGGTCTGGAAT+AGG | + | chr2_2:63579006-63579025 | None:intergenic | 40.0% |
| GGATATTTATCACCTTAGCC+GGG | - | chr2_2:63579020-63579039 | Msa0263840:intron | 40.0% | |
| TCATTAGTTGTGACGAGGAA+AGG | - | chr2_2:63579079-63579098 | Msa0263840:intron | 40.0% | |
| TGACGAGGAAAGGTTGAAAT+TGG | - | chr2_2:63579089-63579108 | Msa0263840:intron | 40.0% | |
| GGAGAAAGAAGCTGAAATTC+TGG | - | chr2_2:63579110-63579129 | Msa0263840:intron | 40.0% | |
| ! | AATTTCAGCAGCACGCTTTT+CGG | + | chr2_2:63579302-63579321 | None:intergenic | 40.0% |
| ! | AAGACACGTGATTTTTCTGG+TGG | - | chr2_2:63579361-63579380 | Msa0263840:intron | 40.0% |
| GAATGGTTGGGTTCATAAAC+AGG | + | chr2_2:63579417-63579436 | None:intergenic | 40.0% | |
| GATGAACCTACAAATCACCT+TGG | - | chr2_2:63579445-63579464 | Msa0263840:CDS | 40.0% | |
| CTTTGGTCGTATATCATAGC+TGG | - | chr2_2:63580099-63580118 | Msa0263840:intron | 40.0% | |
| ! | TAGATTTGGAAGCATGTGTG+TGG | - | chr2_2:63580157-63580176 | Msa0263840:intron | 40.0% |
| CACTCCCAAGATTTCCTTAA+TGG | - | chr2_2:63580228-63580247 | Msa0263840:intron | 40.0% | |
| TCTTCTCTTTACTCTGAGCT+TGG | + | chr2_2:63580446-63580465 | None:intergenic | 40.0% | |
| !! | AGTTTTCCGCTTTGTTGATG+TGG | - | chr2_2:63580524-63580543 | Msa0263840:intron | 40.0% |
| !! | GTTTTCCGCTTTGTTGATGT+GGG | - | chr2_2:63580525-63580544 | Msa0263840:intron | 40.0% |
| !! | TTTTCCGCTTTGTTGATGTG+GGG | - | chr2_2:63580526-63580545 | Msa0263840:intron | 40.0% |
| !! | CTACAAGAACATTGACTTCG+GGG | - | chr2_2:63580614-63580633 | Msa0263840:intron | 40.0% |
| AATCACCTGTCATAAGCTTC+AGG | + | chr2_2:63580698-63580717 | None:intergenic | 40.0% | |
| GAAGCTTATGACAGGTGATT+TGG | - | chr2_2:63580698-63580717 | Msa0263840:intron | 40.0% | |
| !! | GGTGATTTGGTTCCTTTAGA+TGG | - | chr2_2:63580711-63580730 | Msa0263840:intron | 40.0% |
| ! | TTTGGTTCCTTTAGATGGCA+TGG | - | chr2_2:63580716-63580735 | Msa0263840:intron | 40.0% |
| !! | CTAGTTTTTCAGTCAAGTGC+TGG | + | chr2_2:63580779-63580798 | None:intergenic | 40.0% |
| !! | AAAAGAGTACCCTGGAAATG+AGG | - | chr2_2:63580830-63580849 | Msa0263840:intron | 40.0% |
| TCCTTTCTTCCTCATTTCCA+GGG | + | chr2_2:63580842-63580861 | None:intergenic | 40.0% | |
| ATCCTTTCTTCCTCATTTCC+AGG | + | chr2_2:63580843-63580862 | None:intergenic | 40.0% | |
| AAAGGATGAGAGCAGCTATT+GGG | - | chr2_2:63580856-63580875 | Msa0263840:intron | 40.0% | |
| ATTGGGAAGTTTGGATTGTC+GGG | - | chr2_2:63580873-63580892 | Msa0263840:intron | 40.0% | |
| TCATCTAATAGCAGCAAGTG+AGG | + | chr2_2:63580981-63581000 | None:intergenic | 40.0% | |
| ATCCCATTCATTCAATGCCT+CGG | + | chr2_2:63581045-63581064 | None:intergenic | 40.0% | |
| TGATCAAACAGTGACCAGAT+GGG | - | chr2_2:63581136-63581155 | Msa0263840:CDS | 40.0% | |
| CATAATATCACCTTCCCATC+TGG | + | chr2_2:63581153-63581172 | None:intergenic | 40.0% | |
| CAGATGGGAAGGTGATATTA+TGG | - | chr2_2:63581151-63581170 | Msa0263840:CDS | 40.0% | |
| ! | ATAAACCCGCCTTTTCCTTT+AGG | + | chr2_2:63581190-63581209 | None:intergenic | 40.0% |
| TTTGTTGAGGTGGTGAGGTT+TGG | + | chr2_2:63577085-63577104 | None:intergenic | 45.0% | |
| !! | TCGTTTTTGTTGAGGTGGTG+AGG | + | chr2_2:63577090-63577109 | None:intergenic | 45.0% |
| CTTCTCACGTTCCAAATTCC+AGG | - | chr2_2:63577170-63577189 | Msa0263840:three_prime_UTR | 45.0% | |
| GAACATGCGAACCTGGAATT+TGG | + | chr2_2:63577184-63577203 | None:intergenic | 45.0% | |
| AGCTATAGAACATGCGAACC+TGG | + | chr2_2:63577191-63577210 | None:intergenic | 45.0% | |
| TCCATGCAGACGATTGAAGA+TGG | - | chr2_2:63577279-63577298 | Msa0263840:three_prime_UTR | 45.0% | |
| ACCATCTTCAATCGTCTGCA+TGG | + | chr2_2:63577283-63577302 | None:intergenic | 45.0% | |
| !!! | CTGAGCAGCTTTTTTCTTGC+TGG | + | chr2_2:63577314-63577333 | None:intergenic | 45.0% |
| GATATCTGATCGGACATGCA+CGG | - | chr2_2:63577447-63577466 | Msa0263840:CDS | 45.0% | |
| ATATCTGATCGGACATGCAC+GGG | - | chr2_2:63577448-63577467 | Msa0263840:CDS | 45.0% | |
| TTTGTTCCCATCCTCTCTCT+AGG | - | chr2_2:63577476-63577495 | Msa0263840:CDS | 45.0% | |
| TTGTTCCCATCCTCTCTCTA+GGG | - | chr2_2:63577477-63577496 | Msa0263840:CDS | 45.0% | |
| GAATATCCCTAGAGAGAGGA+TGG | + | chr2_2:63577486-63577505 | None:intergenic | 45.0% | |
| ! | TCCTCTCTCTAGGGATATTC+AGG | - | chr2_2:63577486-63577505 | Msa0263840:CDS | 45.0% |
| ACCTGAATATCCCTAGAGAG+AGG | + | chr2_2:63577490-63577509 | None:intergenic | 45.0% | |
| AAGTGAATCCATCAGACCCT+TGG | - | chr2_2:63578135-63578154 | Msa0263840:CDS | 45.0% | |
| AATTACCACCAAGGGTCTGA+TGG | + | chr2_2:63578146-63578165 | None:intergenic | 45.0% | |
| TGAACACCTAGTCAAGCAGT+TGG | - | chr2_2:63578532-63578551 | Msa0263840:intron | 45.0% | |
| GAACACCTAGTCAAGCAGTT+GGG | - | chr2_2:63578533-63578552 | Msa0263840:intron | 45.0% | |
| TGTCAGAGGCTTCAATTTCC+CGG | + | chr2_2:63579041-63579060 | None:intergenic | 45.0% | |
| TTTATGTTCCAGGAGGATGG+TGG | - | chr2_2:63579220-63579239 | Msa0263840:CDS | 45.0% | |
| ! | TGAACGAGTTTTTGAACGGC+TGG | - | chr2_2:63579255-63579274 | Msa0263840:CDS | 45.0% |
| ! | TTTTGAACGGCTGGAAGCTA+TGG | - | chr2_2:63579264-63579283 | Msa0263840:CDS | 45.0% |
| TGGTTTCAACAAGCAGATGC+AGG | - | chr2_2:63579333-63579352 | Msa0263840:intron | 45.0% | |
| !! | CACGTGATTTTTCTGGTGGA+TGG | - | chr2_2:63579365-63579384 | Msa0263840:intron | 45.0% |
| ! | TTTCTGGTGGATGGAGAATG+AGG | - | chr2_2:63579374-63579393 | Msa0263840:intron | 45.0% |
| ! | GGGATACCAAGGTGATTTGT+AGG | + | chr2_2:63579454-63579473 | None:intergenic | 45.0% |
| !! | GTTACTCTTTTCGGGGAAGA+GGG | + | chr2_2:63579474-63579493 | None:intergenic | 45.0% |
| !! | AGTTACTCTTTTCGGGGAAG+AGG | + | chr2_2:63579475-63579494 | None:intergenic | 45.0% |
| !! | TTCTAGTTTGTTCGTTGGGC+AGG | - | chr2_2:63579675-63579694 | Msa0263840:intron | 45.0% |
| AGAACCAGATGAAGCAGTAC+AGG | - | chr2_2:63580346-63580365 | Msa0263840:intron | 45.0% | |
| ! | TACATTGCACGATTTGGCCA+TGG | - | chr2_2:63580402-63580421 | Msa0263840:intron | 45.0% |
| !!! | GAGCTAGTTTTGCTGATCCA+TGG | + | chr2_2:63580422-63580441 | None:intergenic | 45.0% |
| ACTCTTGCAAAAATGGAGCG+CGG | - | chr2_2:63580465-63580484 | Msa0263840:intron | 45.0% | |
| GTTTCCCCACATCAACAAAG+CGG | + | chr2_2:63580533-63580552 | None:intergenic | 45.0% | |
| CAAATGTCACCTCCACAAAC+TGG | + | chr2_2:63580572-63580591 | None:intergenic | 45.0% | |
| CAGTTTGTGGAGGTGACATT+TGG | - | chr2_2:63580570-63580589 | Msa0263840:intron | 45.0% | |
| TTTAGACTCCAGGATTGCTC+TGG | - | chr2_2:63580641-63580660 | Msa0263840:intron | 45.0% | |
| ACGTTCCTGAAGCTTATGAC+AGG | - | chr2_2:63580690-63580709 | Msa0263840:intron | 45.0% | |
| GTGCAATGCGAAGGTGATTA+TGG | + | chr2_2:63580749-63580768 | None:intergenic | 45.0% | |
| GGTGAAATTGTGCAATGCGA+AGG | + | chr2_2:63580758-63580777 | None:intergenic | 45.0% | |
| ACCCTGGAAATGAGGAAGAA+AGG | - | chr2_2:63580838-63580857 | Msa0263840:intron | 45.0% | |
| GAAAGGATGAGAGCAGCTAT+TGG | - | chr2_2:63580855-63580874 | Msa0263840:intron | 45.0% | |
| AGAGCAGCTATTGGGAAGTT+TGG | - | chr2_2:63580864-63580883 | Msa0263840:intron | 45.0% | |
| !! | TAGCCGAGGCATTGAATGAA+TGG | - | chr2_2:63581039-63581058 | Msa0263840:intron | 45.0% |
| !! | AGCCGAGGCATTGAATGAAT+GGG | - | chr2_2:63581040-63581059 | Msa0263840:intron | 45.0% |
| !! | GAGGCATTGAATGAATGGGA+TGG | - | chr2_2:63581044-63581063 | Msa0263840:intron | 45.0% |
| GCATTGAATGAATGGGATGG+TGG | - | chr2_2:63581047-63581066 | Msa0263840:intron | 45.0% | |
| AGCACACACCCATATCTCAT+GGG | + | chr2_2:63581117-63581136 | None:intergenic | 45.0% | |
| CTGATCAAACAGTGACCAGA+TGG | - | chr2_2:63581135-63581154 | Msa0263840:CDS | 45.0% | |
| GGATTTCAAGCTGCACCTAA+AGG | - | chr2_2:63581172-63581191 | Msa0263840:CDS | 45.0% | |
| CAAGCTGCACCTAAAGGAAA+AGG | - | chr2_2:63581178-63581197 | Msa0263840:CDS | 45.0% | |
| GCGGGTTTATCTGACTGAAA+AGG | - | chr2_2:63581200-63581219 | Msa0263840:CDS | 45.0% | |
| ! | CTTGAGGTGGATTTCTCTCA+TGG | - | chr2_2:63581304-63581323 | Msa0263840:intron | 45.0% |
| ! | TGAGGTGGTGAGGTTTGGTT+TGG | + | chr2_2:63577080-63577099 | None:intergenic | 50.0% |
| ! | TGCAGTGGTGATGAGGAGTT+AGG | + | chr2_2:63577135-63577154 | None:intergenic | 50.0% |
| ! | GATCTTGTGCAGTGGTGATG+AGG | + | chr2_2:63577142-63577161 | None:intergenic | 50.0% |
| !!! | CTTTTTCGATGAAGCGGTGG+CGG | + | chr2_2:63577377-63577396 | None:intergenic | 50.0% |
| !!! | CGACGCCTTTTTCGATGAAG+CGG | + | chr2_2:63577383-63577402 | None:intergenic | 50.0% |
| ! | CGCTTCATCGAAAAAGGCGT+CGG | - | chr2_2:63577381-63577400 | Msa0263840:CDS | 50.0% |
| !! | ATCGAAAAAGGCGTCGGAGA+AGG | - | chr2_2:63577387-63577406 | Msa0263840:CDS | 50.0% |
| ! | GCGGTGGATAGTGTTGCTAA+CGG | - | chr2_2:63577409-63577428 | Msa0263840:CDS | 50.0% |
| TGAATCCATCAGACCCTTGG+TGG | - | chr2_2:63578138-63578157 | Msa0263840:CDS | 50.0% | |
| TTGCTTGGATTGAACGGCTG+TGG | - | chr2_2:63578940-63578959 | Msa0263840:intron | 50.0% | |
| ! | GGTCTGGAATAGGAAGCTCA+CGG | + | chr2_2:63578996-63579015 | None:intergenic | 50.0% |
| GCTTCCTATTCCAGACCACA+TGG | - | chr2_2:63578999-63579018 | Msa0263840:intron | 50.0% | |
| AGGCTTCAATTTCCCGGCTA+AGG | + | chr2_2:63579035-63579054 | None:intergenic | 50.0% | |
| GGCTGTCATTAGTTGTGACG+AGG | - | chr2_2:63579074-63579093 | Msa0263840:intron | 50.0% | |
| ! | AGCTGAAATTCTGGGAGCAC+AGG | - | chr2_2:63579119-63579138 | Msa0263840:CDS | 50.0% |
| GGCTGTGCTGTATTGTGCTT+TGG | - | chr2_2:63579807-63579826 | Msa0263840:CDS | 50.0% | |
| ! | TTTGGAAGCATGTGTGTGGC+TGG | - | chr2_2:63580161-63580180 | Msa0263840:intron | 50.0% |
| TGTTCAGACACGTGCTGAAC+TGG | - | chr2_2:63580320-63580339 | Msa0263840:intron | 50.0% | |
| ACCAGATGAAGCAGTACAGG+TGG | - | chr2_2:63580349-63580368 | Msa0263840:intron | 50.0% | |
| CCAGATGAAGCAGTACAGGT+GGG | - | chr2_2:63580350-63580369 | Msa0263840:intron | 50.0% | |
| GGAGCAGATTGCCTCAATGA+AGG | - | chr2_2:63580377-63580396 | Msa0263840:intron | 50.0% | |
| ACAAACTGGAGAACAGGTGG+GGG | + | chr2_2:63580558-63580577 | None:intergenic | 50.0% | |
| CACAAACTGGAGAACAGGTG+GGG | + | chr2_2:63580559-63580578 | None:intergenic | 50.0% | |
| CCACAAACTGGAGAACAGGT+GGG | + | chr2_2:63580560-63580579 | None:intergenic | 50.0% | |
| TCCACAAACTGGAGAACAGG+TGG | + | chr2_2:63580561-63580580 | None:intergenic | 50.0% | |
| ACCTGTTCTCCAGTTTGTGG+AGG | - | chr2_2:63580560-63580579 | Msa0263840:intron | 50.0% | |
| ACCTCCACAAACTGGAGAAC+AGG | + | chr2_2:63580564-63580583 | None:intergenic | 50.0% | |
| ATTGCTCTGGTTGGACCCAA+TGG | - | chr2_2:63580654-63580673 | Msa0263840:intron | 50.0% | |
| CGACGAACCATGCCATCTAA+AGG | + | chr2_2:63580726-63580745 | None:intergenic | 50.0% | |
| TGGATTGTCGGGTAAAGCAC+AGG | - | chr2_2:63580884-63580903 | Msa0263840:intron | 50.0% | |
| CAGCAAGTGAGGCTGTCTAT+AGG | + | chr2_2:63580970-63580989 | None:intergenic | 50.0% | |
| !! | GACAATTGACTCGTTAGCCG+AGG | - | chr2_2:63581025-63581044 | Msa0263840:intron | 50.0% |
| ! | GAATGAATGGGATGGTGGCA+TGG | - | chr2_2:63581052-63581071 | Msa0263840:intron | 50.0% |
| ATCAGGTGGCCCATGAGATA+TGG | - | chr2_2:63581105-63581124 | Msa0263840:CDS | 50.0% | |
| TCAGGTGGCCCATGAGATAT+GGG | - | chr2_2:63581106-63581125 | Msa0263840:CDS | 50.0% | |
| CAGCACACACCCATATCTCA+TGG | + | chr2_2:63581118-63581137 | None:intergenic | 50.0% | |
| CAAACAGTGACCAGATGGGA+AGG | - | chr2_2:63581140-63581159 | Msa0263840:CDS | 50.0% | |
| GCTGCACCTAAAGGAAAAGG+CGG | - | chr2_2:63581181-63581200 | Msa0263840:CDS | 50.0% | |
| CTGCACCTAAAGGAAAAGGC+GGG | - | chr2_2:63581182-63581201 | Msa0263840:CDS | 50.0% | |
| !! | TTGGTGTTGCTAGCTGCTTG+AGG | - | chr2_2:63581288-63581307 | Msa0263840:intron | 50.0% |
| CTTCCCTCCTCTCTTTGCAG+CGG | + | chr2_2:63577350-63577369 | None:intergenic | 55.0% | |
| CGCCACCGCTTCATCGAAAA+AGG | - | chr2_2:63577375-63577394 | Msa0263840:CDS | 55.0% | |
| !!! | CGCCTTTTTCGATGAAGCGG+TGG | + | chr2_2:63577380-63577399 | None:intergenic | 55.0% |
| !! | GAAAAAGGCGTCGGAGAAGG+CGG | - | chr2_2:63577390-63577409 | Msa0263840:CDS | 55.0% |
| ACCTAGTCAAGCAGTTGGGC+TGG | - | chr2_2:63578537-63578556 | Msa0263840:intron | 55.0% | |
| ACCAGCCCAACTGCTTGACT+AGG | + | chr2_2:63578541-63578560 | None:intergenic | 55.0% | |
| !! | AGCAGTTGGGCTGGTAGCAA+TGG | - | chr2_2:63578546-63578565 | Msa0263840:intron | 55.0% |
| AGCCTCTGACATGTCTGCGT+TGG | - | chr2_2:63579050-63579069 | Msa0263840:intron | 55.0% | |
| CTCCAACGCAGACATGTCAG+AGG | + | chr2_2:63579055-63579074 | None:intergenic | 55.0% | |
| CTCTGACATGTCTGCGTTGG+AGG | - | chr2_2:63579053-63579072 | Msa0263840:intron | 55.0% | |
| ! | ATGTTCCAGGAGGATGGTGG+TGG | - | chr2_2:63579223-63579242 | Msa0263840:CDS | 55.0% |
| TTCGGGGAAGAGGGATACCA+AGG | + | chr2_2:63579465-63579484 | None:intergenic | 55.0% | |
| CCCACCTGTACTGCTTCATC+TGG | + | chr2_2:63580353-63580372 | None:intergenic | 55.0% | |
| CTTGCAAAAATGGAGCGCGG+TGG | - | chr2_2:63580468-63580487 | Msa0263840:intron | 55.0% | |
| ! | CGGTGGACTTACAGAGAAGG+TGG | - | chr2_2:63580485-63580504 | Msa0263840:intron | 55.0% |
| CCCACCTGTTCTCCAGTTTG+TGG | - | chr2_2:63580557-63580576 | Msa0263840:intron | 55.0% | |
| ! | TCGGGGTCGATTTAGACTCC+AGG | - | chr2_2:63580631-63580650 | Msa0263840:intron | 55.0% |
| GACTCCAGGATTGCTCTGGT+TGG | - | chr2_2:63580645-63580664 | Msa0263840:intron | 55.0% | |
| TGGTTGGACCCAATGGAGCT+GGG | - | chr2_2:63580661-63580680 | Msa0263840:intron | 55.0% | |
| GTGCTCTTCCCAGCTCCATT+GGG | + | chr2_2:63580672-63580691 | None:intergenic | 55.0% | |
| GGAGTCGCGTGATCTTTGCA+TGG | - | chr2_2:63580940-63580959 | Msa0263840:intron | 55.0% | |
| ! | ATGGGATGGTGGCATGGTTC+TGG | - | chr2_2:63581058-63581077 | Msa0263840:intron | 55.0% |
| ! | GTGTTGCTAGCTGCTTGAGG+TGG | - | chr2_2:63581291-63581310 | Msa0263840:intron | 55.0% |
| CGCTGCAAAGAGAGGAGGGA+AGG | - | chr2_2:63577348-63577367 | Msa0263840:exon | 60.0% | |
| CTTCACCACCACCATCCTCC+TGG | + | chr2_2:63579231-63579250 | None:intergenic | 60.0% | |
| ! | GGAAGCATGTGTGTGGCTGG+AGG | - | chr2_2:63580164-63580183 | Msa0263840:intron | 60.0% |
| GAAGCAGTACAGGTGGGAGC+AGG | - | chr2_2:63580356-63580375 | Msa0263840:intron | 60.0% | |
| ! | GCGCGGTGGACTTACAGAGA+AGG | - | chr2_2:63580482-63580501 | Msa0263840:intron | 60.0% |
| GGGTCCAACCAGAGCAATCC+TGG | + | chr2_2:63580652-63580671 | None:intergenic | 60.0% | |
| CTGGTTGGACCCAATGGAGC+TGG | - | chr2_2:63580660-63580679 | Msa0263840:intron | 60.0% | |
| CGTGCTCTTCCCAGCTCCAT+TGG | + | chr2_2:63580673-63580692 | None:intergenic | 60.0% | |
| AAGGCAGCGTCTGTGATGCG+CGG | - | chr2_2:63581219-63581238 | Msa0263840:CDS | 60.0% | |
| CCCTCCTCTCTTTGCAGCGG+CGG | + | chr2_2:63577347-63577366 | None:intergenic | 65.0% | |
| CCGCCGCTGCAAAGAGAGGA+GGG | - | chr2_2:63577344-63577363 | Msa0263840:exon | 65.0% | |
| !! | AAAGGCGTCGGAGAAGGCGG+TGG | - | chr2_2:63577393-63577412 | Msa0263840:CDS | 65.0% |
| GCTGCCGCCGCTGCAAAGAG+AGG | - | chr2_2:63577340-63577359 | Msa0263840:three_prime_UTR | 70.0% | |
| GCCGCCGCTGCAAAGAGAGG+AGG | - | chr2_2:63577343-63577362 | Msa0263840:exon | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 63577029 | 63581550 | 63577029 | ID=Msa0263840;Name=Msa0263840 |
| chr2_2 | mRNA | 63577029 | 63581550 | 63577029 | ID=Msa0263840-mRNA-1;Parent=Msa0263840;Name=Msa0263840-mRNA-1;_AED=0.18;_eAED=0.18;_QI=195|0.83|0.85|1|0.83|0.85|7|333|607 |
| chr2_2 | exon | 63577029 | 63578419 | 63577029 | ID=Msa0263840-mRNA-1:exon:19745;Parent=Msa0263840-mRNA-1 |
| chr2_2 | exon | 63579113 | 63579347 | 63579113 | ID=Msa0263840-mRNA-1:exon:19744;Parent=Msa0263840-mRNA-1 |
| chr2_2 | exon | 63579439 | 63579649 | 63579439 | ID=Msa0263840-mRNA-1:exon:19743;Parent=Msa0263840-mRNA-1 |
| chr2_2 | exon | 63579758 | 63579831 | 63579758 | ID=Msa0263840-mRNA-1:exon:19742;Parent=Msa0263840-mRNA-1 |
| chr2_2 | exon | 63579960 | 63579995 | 63579960 | ID=Msa0263840-mRNA-1:exon:19741;Parent=Msa0263840-mRNA-1 |
| chr2_2 | exon | 63581072 | 63581291 | 63581072 | ID=Msa0263840-mRNA-1:exon:19740;Parent=Msa0263840-mRNA-1 |
| chr2_2 | exon | 63581366 | 63581550 | 63581366 | ID=Msa0263840-mRNA-1:exon:19739;Parent=Msa0263840-mRNA-1 |
| chr2_2 | five_prime_UTR | 63581366 | 63581550 | 63581366 | ID=Msa0263840-mRNA-1:five_prime_utr;Parent=Msa0263840-mRNA-1 |
| chr2_2 | five_prime_UTR | 63581282 | 63581291 | 63581282 | ID=Msa0263840-mRNA-1:five_prime_utr;Parent=Msa0263840-mRNA-1 |
| chr2_2 | CDS | 63581072 | 63581281 | 63581072 | ID=Msa0263840-mRNA-1:cds;Parent=Msa0263840-mRNA-1 |
| chr2_2 | CDS | 63579960 | 63579995 | 63579960 | ID=Msa0263840-mRNA-1:cds;Parent=Msa0263840-mRNA-1 |
| chr2_2 | CDS | 63579758 | 63579831 | 63579758 | ID=Msa0263840-mRNA-1:cds;Parent=Msa0263840-mRNA-1 |
| chr2_2 | CDS | 63579439 | 63579649 | 63579439 | ID=Msa0263840-mRNA-1:cds;Parent=Msa0263840-mRNA-1 |
| chr2_2 | CDS | 63579113 | 63579347 | 63579113 | ID=Msa0263840-mRNA-1:cds;Parent=Msa0263840-mRNA-1 |
| chr2_2 | CDS | 63577362 | 63578419 | 63577362 | ID=Msa0263840-mRNA-1:cds;Parent=Msa0263840-mRNA-1 |
| chr2_2 | three_prime_UTR | 63577029 | 63577361 | 63577029 | ID=Msa0263840-mRNA-1:three_prime_utr;Parent=Msa0263840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
