Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437680 | XP_003610972.1 | 99.168 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 0.0 | 988 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437680 | sp|Q9LPR8|SCL3_ARATH | 65.914 | 487 | 155 | 7 | 1 | 481 | 1 | 482 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437680 | G7K9A5 | 99.168 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 0.0 | 988 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1437680 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001790 | Msa1437680 | 0.816169 | 6.352236e-52 | -8.615850e-47 |
| Msa0036140 | Msa1437680 | 0.839621 | 1.420242e-57 | -8.615850e-47 |
| Msa0048000 | Msa1437680 | 0.804844 | 1.777623e-49 | -8.615850e-47 |
| Msa0077450 | Msa1437680 | 0.802170 | 6.371190e-49 | -8.615850e-47 |
| Msa0084080 | Msa1437680 | 0.816437 | 5.533140e-52 | -8.615850e-47 |
| Msa0089360 | Msa1437680 | 0.820118 | 8.121601e-53 | -8.615850e-47 |
| Msa0099620 | Msa1437680 | 0.800222 | 1.594458e-48 | -8.615850e-47 |
| Msa0099650 | Msa1437680 | 0.812968 | 3.246624e-51 | -8.615850e-47 |
| Msa0102120 | Msa1437680 | 0.818272 | 2.137717e-52 | -8.615850e-47 |
| Msa0120340 | Msa1437680 | 0.801041 | 1.085683e-48 | -8.615850e-47 |
| Msa1359040 | Msa1437680 | 0.804973 | 1.670117e-49 | -8.615850e-47 |
| Msa1378230 | Msa1437680 | 0.837628 | 4.645378e-57 | -8.615850e-47 |
| Msa1379850 | Msa1437680 | 0.809934 | 1.480313e-50 | -8.615850e-47 |
| Msa1382930 | Msa1437680 | 0.849821 | 2.528003e-60 | -8.615850e-47 |
| Msa1384350 | Msa1437680 | 0.842058 | 3.261099e-58 | -8.615850e-47 |
| Msa1390050 | Msa1437680 | 0.812383 | 4.359242e-51 | -8.615850e-47 |
| Msa1392260 | Msa1437680 | 0.833502 | 5.141864e-56 | -8.615850e-47 |
| Msa1393040 | Msa1437680 | 0.806941 | 6.439890e-50 | -8.615850e-47 |
| Msa1417200 | Msa1437680 | 0.812103 | 5.015891e-51 | -8.615850e-47 |
| Msa1420140 | Msa1437680 | 0.812765 | 3.596149e-51 | -8.615850e-47 |
| Msa1424450 | Msa1437680 | 0.813183 | 2.911534e-51 | -8.615850e-47 |
| Msa1425100 | Msa1437680 | 0.807299 | 5.409996e-50 | -8.615850e-47 |
| Msa1429900 | Msa1437680 | 0.837675 | 4.519224e-57 | -8.615850e-47 |
| Msa1437680 | Msa1438910 | 0.840039 | 1.105586e-57 | -8.615850e-47 |
| Msa1437680 | Msa1444250 | -0.806769 | 7.004138e-50 | -8.615850e-47 |
| Msa1437680 | Msa1447150 | 0.825437 | 4.690521e-54 | -8.615850e-47 |
| Msa1437680 | Msa1451620 | -0.827977 | 1.161337e-54 | -8.615850e-47 |
| Msa1437680 | Msa1454120 | 0.822159 | 2.749653e-53 | -8.615850e-47 |
| Msa1437680 | Msa1454860 | 0.847577 | 1.058805e-59 | -8.615850e-47 |
| Msa1437680 | Msa1464940 | 0.828967 | 6.697933e-55 | -8.615850e-47 |
| Msa1437680 | Msa1466730 | 0.817320 | 3.505585e-52 | -8.615850e-47 |
| Msa0607540 | Msa1437680 | 0.831540 | 1.575593e-55 | -8.615850e-47 |
| Msa0610590 | Msa1437680 | 0.808023 | 3.796012e-50 | -8.615850e-47 |
| Msa0610890 | Msa1437680 | 0.824306 | 8.667762e-54 | -8.615850e-47 |
| Msa0615310 | Msa1437680 | 0.810531 | 1.100424e-50 | -8.615850e-47 |
| Msa0621750 | Msa1437680 | -0.800066 | 1.715441e-48 | -8.615850e-47 |
| Msa0628740 | Msa1437680 | 0.829881 | 4.016939e-55 | -8.615850e-47 |
| Msa0647830 | Msa1437680 | 0.824654 | 7.178610e-54 | -8.615850e-47 |
| Msa0647980 | Msa1437680 | 0.808942 | 2.416764e-50 | -8.615850e-47 |
| Msa0651190 | Msa1437680 | 0.801840 | 7.445927e-49 | -8.615850e-47 |
| Msa0651270 | Msa1437680 | 0.829774 | 4.263710e-55 | -8.615850e-47 |
| Msa0653490 | Msa1437680 | 0.801134 | 1.039000e-48 | -8.615850e-47 |
| Msa0654720 | Msa1437680 | 0.804893 | 1.736103e-49 | -8.615850e-47 |
| Msa0657970 | Msa1437680 | 0.801617 | 8.273607e-49 | -8.615850e-47 |
| Msa0666140 | Msa1437680 | 0.822341 | 2.495178e-53 | -8.615850e-47 |
| Msa0667890 | Msa1437680 | 0.821114 | 4.795886e-53 | -8.615850e-47 |
| Msa0678820 | Msa1437680 | 0.806885 | 6.619553e-50 | -8.615850e-47 |
| Msa0688070 | Msa1437680 | 0.828228 | 1.010271e-54 | -8.615850e-47 |
| Msa0688670 | Msa1437680 | 0.828913 | 6.900268e-55 | -8.615850e-47 |
| Msa0690440 | Msa1437680 | 0.824584 | 7.455896e-54 | -8.615850e-47 |
| Msa0692230 | Msa1437680 | 0.825511 | 4.505555e-54 | -8.615850e-47 |
| Msa0693600 | Msa1437680 | 0.800380 | 1.480777e-48 | -8.615850e-47 |
| Msa0698360 | Msa1437680 | 0.824715 | 6.945734e-54 | -8.615850e-47 |
| Msa0712080 | Msa1437680 | 0.959679 | 1.042453e-117 | -8.615850e-47 |
| Msa0731180 | Msa1437680 | 0.808089 | 3.675463e-50 | -8.615850e-47 |
| Msa0740510 | Msa1437680 | 0.815091 | 1.104014e-51 | -8.615850e-47 |
| Msa0749930 | Msa1437680 | 0.996288 | 1.186453e-225 | -8.615850e-47 |
| Msa0757080 | Msa1437680 | 0.800407 | 1.462430e-48 | -8.615850e-47 |
| Msa0761910 | Msa1437680 | 0.811214 | 7.830361e-51 | -8.615850e-47 |
| Msa0778520 | Msa1437680 | 0.817037 | 4.058892e-52 | -8.615850e-47 |
| Msa0790510 | Msa1437680 | 0.813547 | 2.422244e-51 | -8.615850e-47 |
| Msa0795080 | Msa1437680 | 0.812261 | 4.634007e-51 | -8.615850e-47 |
| Msa0798860 | Msa1437680 | 0.833527 | 5.067974e-56 | -8.615850e-47 |
| Msa0803590 | Msa1437680 | 0.833005 | 6.834898e-56 | -8.615850e-47 |
| Msa0807050 | Msa1437680 | 0.801555 | 8.520263e-49 | -8.615850e-47 |
| Msa0820770 | Msa1437680 | 0.823312 | 1.482207e-53 | -8.615850e-47 |
| Msa0830420 | Msa1437680 | 0.991131 | 4.724990e-186 | -8.615850e-47 |
| Msa0830530 | Msa1437680 | 0.802955 | 4.388914e-49 | -8.615850e-47 |
| Msa0832990 | Msa1437680 | 0.801496 | 8.761677e-49 | -8.615850e-47 |
| Msa0122590 | Msa1437680 | 0.819211 | 1.308288e-52 | -8.615850e-47 |
| Msa0159770 | Msa1437680 | 0.820423 | 6.912563e-53 | -8.615850e-47 |
| Msa0166870 | Msa1437680 | 0.840290 | 9.506832e-58 | -8.615850e-47 |
| Msa0170140 | Msa1437680 | 0.828261 | 9.920727e-55 | -8.615850e-47 |
| Msa0188630 | Msa1437680 | 0.808006 | 3.827776e-50 | -8.615850e-47 |
| Msa0188830 | Msa1437680 | 0.828499 | 8.688677e-55 | -8.615850e-47 |
| Msa0205510 | Msa1437680 | 0.802086 | 6.628233e-49 | -8.615850e-47 |
| Msa0206010 | Msa1437680 | 0.814463 | 1.521446e-51 | -8.615850e-47 |
| Msa0220440 | Msa1437680 | 0.831107 | 2.013616e-55 | -8.615850e-47 |
| Msa0222340 | Msa1437680 | 0.831899 | 1.284616e-55 | -8.615850e-47 |
| Msa1230830 | Msa1437680 | 0.839675 | 1.374913e-57 | -8.615850e-47 |
| Msa1233500 | Msa1437680 | 0.819843 | 9.388814e-53 | -8.615850e-47 |
| Msa1258380 | Msa1437680 | -0.812168 | 4.854892e-51 | -8.615850e-47 |
| Msa1276440 | Msa1437680 | 0.808202 | 3.477517e-50 | -8.615850e-47 |
| Msa1279210 | Msa1437680 | 0.857533 | 1.529674e-62 | -8.615850e-47 |
| Msa1294480 | Msa1437680 | 0.807507 | 4.886730e-50 | -8.615850e-47 |
| Msa1307740 | Msa1437680 | 0.807984 | 3.869721e-50 | -8.615850e-47 |
| Msa1314340 | Msa1437680 | 0.839965 | 1.155603e-57 | -8.615850e-47 |
| Msa1318990 | Msa1437680 | 0.836497 | 9.037966e-57 | -8.615850e-47 |
| Msa1322190 | Msa1437680 | 0.807199 | 5.680541e-50 | -8.615850e-47 |
| Msa1328700 | Msa1437680 | 0.826823 | 2.195734e-54 | -8.615850e-47 |
| Msa1331910 | Msa1437680 | 0.801066 | 1.073077e-48 | -8.615850e-47 |
| Msa1340650 | Msa1437680 | 0.833510 | 5.115882e-56 | -8.615850e-47 |
| Msa0373450 | Msa1437680 | 0.800232 | 1.587417e-48 | -8.615850e-47 |
| Msa0376590 | Msa1437680 | 0.835870 | 1.304350e-56 | -8.615850e-47 |
| Msa0379640 | Msa1437680 | 0.846824 | 1.704342e-59 | -8.615850e-47 |
| Msa0389340 | Msa1437680 | 0.833575 | 4.928724e-56 | -8.615850e-47 |
| Msa0389810 | Msa1437680 | 0.805758 | 1.143759e-49 | -8.615850e-47 |
| Msa0426900 | Msa1437680 | 0.819960 | 8.826509e-53 | -8.615850e-47 |
| Msa0428930 | Msa1437680 | 0.853986 | 1.662633e-61 | -8.615850e-47 |
| Msa0436370 | Msa1437680 | 0.810400 | 1.174629e-50 | -8.615850e-47 |
| Msa0444750 | Msa1437680 | -0.800543 | 1.371936e-48 | -8.615850e-47 |
| Msa0453350 | Msa1437680 | 0.807712 | 4.421978e-50 | -8.615850e-47 |
| Msa0464900 | Msa1437680 | 0.809050 | 2.291827e-50 | -8.615850e-47 |
| Msa0467930 | Msa1437680 | 0.802574 | 5.259493e-49 | -8.615850e-47 |
| Msa0468130 | Msa1437680 | 0.804613 | 1.986348e-49 | -8.615850e-47 |
| Msa0475490 | Msa1437680 | 0.833168 | 6.225244e-56 | -8.615850e-47 |
| Msa0477130 | Msa1437680 | -0.839189 | 1.838839e-57 | -8.615850e-47 |
| Msa0479970 | Msa1437680 | 0.814263 | 1.684159e-51 | -8.615850e-47 |
| Msa0482190 | Msa1437680 | -0.812357 | 4.416530e-51 | -8.615850e-47 |
| Msa0982240 | Msa1437680 | 0.836562 | 8.703901e-57 | -8.615850e-47 |
| Msa0982270 | Msa1437680 | 0.818280 | 2.128107e-52 | -8.615850e-47 |
| Msa0999040 | Msa1437680 | 0.804950 | 1.688711e-49 | -8.615850e-47 |
| Msa1002480 | Msa1437680 | 0.859271 | 4.641952e-63 | -8.615850e-47 |
| Msa1005410 | Msa1437680 | 0.805514 | 1.286977e-49 | -8.615850e-47 |
| Msa1023920 | Msa1437680 | 0.828918 | 6.881611e-55 | -8.615850e-47 |
| Msa1029210 | Msa1437680 | 0.820276 | 7.471884e-53 | -8.615850e-47 |
| Msa1030970 | Msa1437680 | 0.802779 | 4.771704e-49 | -8.615850e-47 |
| Msa1062920 | Msa1437680 | 0.807653 | 4.550481e-50 | -8.615850e-47 |
| Msa1065610 | Msa1437680 | 0.812804 | 3.526172e-51 | -8.615850e-47 |
| Msa1070850 | Msa1437680 | 0.816373 | 5.717785e-52 | -8.615850e-47 |
| Msa1075080 | Msa1437680 | -0.815451 | 9.184651e-52 | -8.615850e-47 |
| Msa1075220 | Msa1437680 | -0.805725 | 1.161882e-49 | -8.615850e-47 |
| Msa1082500 | Msa1437680 | 0.814001 | 1.923721e-51 | -8.615850e-47 |
| Msa1084260 | Msa1437680 | 0.813183 | 2.912335e-51 | -8.615850e-47 |
| Msa1090260 | Msa1437680 | 0.800746 | 1.246982e-48 | -8.615850e-47 |
| Msa1092090 | Msa1437680 | 0.837508 | 4.988887e-57 | -8.615850e-47 |
| Msa1100480 | Msa1437680 | 0.824341 | 8.505242e-54 | -8.615850e-47 |
| Msa0243720 | Msa1437680 | 0.812287 | 4.573054e-51 | -8.615850e-47 |
| Msa0245940 | Msa1437680 | 0.815145 | 1.074234e-51 | -8.615850e-47 |
| Msa0249100 | Msa1437680 | 0.803426 | 3.505545e-49 | -8.615850e-47 |
| Msa0250410 | Msa1437680 | 0.808973 | 2.380323e-50 | -8.615850e-47 |
| Msa0263840 | Msa1437680 | 0.812766 | 3.593988e-51 | -8.615850e-47 |
| Msa0270100 | Msa1437680 | 0.808388 | 3.174208e-50 | -8.615850e-47 |
| Msa0270270 | Msa1437680 | 0.811593 | 6.477210e-51 | -8.615850e-47 |
| Msa0275690 | Msa1437680 | 0.815939 | 7.148521e-52 | -8.615850e-47 |
| Msa0282250 | Msa1437680 | 0.828060 | 1.109040e-54 | -8.615850e-47 |
| Msa0284520 | Msa1437680 | 0.812684 | 3.745373e-51 | -8.615850e-47 |
| Msa0287410 | Msa1437680 | 0.836473 | 9.165912e-57 | -8.615850e-47 |
| Msa0299580 | Msa1437680 | 0.832414 | 9.581276e-56 | -8.615850e-47 |
| Msa0301680 | Msa1437680 | 0.812718 | 3.681740e-51 | -8.615850e-47 |
| Msa0319170 | Msa1437680 | 0.803897 | 2.799144e-49 | -8.615850e-47 |
| Msa0323180 | Msa1437680 | 0.804890 | 1.738735e-49 | -8.615850e-47 |
| Msa0326110 | Msa1437680 | 0.823844 | 1.112778e-53 | -8.615850e-47 |
| Msa0344530 | Msa1437680 | 0.808282 | 3.343454e-50 | -8.615850e-47 |
| Msa0351810 | Msa1437680 | 0.811623 | 6.380566e-51 | -8.615850e-47 |
| Msa1107900 | Msa1437680 | 0.828251 | 9.976375e-55 | -8.615850e-47 |
| Msa1111180 | Msa1437680 | 0.821173 | 4.646973e-53 | -8.615850e-47 |
| Msa1116130 | Msa1437680 | -0.800980 | 1.117215e-48 | -8.615850e-47 |
| Msa1118110 | Msa1437680 | 0.814660 | 1.375608e-51 | -8.615850e-47 |
| Msa1118750 | Msa1437680 | 0.818210 | 2.208018e-52 | -8.615850e-47 |
| Msa1124540 | Msa1437680 | -0.824877 | 6.361225e-54 | -8.615850e-47 |
| Msa1130110 | Msa1437680 | 0.845157 | 4.837217e-59 | -8.615850e-47 |
| Msa1132950 | Msa1437680 | 0.814248 | 1.697156e-51 | -8.615850e-47 |
| Msa1143270 | Msa1437680 | 0.838259 | 3.197360e-57 | -8.615850e-47 |
| Msa1144390 | Msa1437680 | 0.806089 | 9.741814e-50 | -8.615850e-47 |
| Msa1151720 | Msa1437680 | 0.805251 | 1.460864e-49 | -8.615850e-47 |
| Msa1154780 | Msa1437680 | 0.811350 | 7.316971e-51 | -8.615850e-47 |
| Msa1158670 | Msa1437680 | 0.859518 | 3.913120e-63 | -8.615850e-47 |
| Msa1162550 | Msa1437680 | -0.806575 | 7.696855e-50 | -8.615850e-47 |
| Msa1170800 | Msa1437680 | 0.843707 | 1.187075e-58 | -8.615850e-47 |
| Msa1174040 | Msa1437680 | 0.800552 | 1.365867e-48 | -8.615850e-47 |
| Msa1183100 | Msa1437680 | -0.811096 | 8.305807e-51 | -8.615850e-47 |
| Msa1199560 | Msa1437680 | 0.817354 | 3.443552e-52 | -8.615850e-47 |
| Msa1207380 | Msa1437680 | 0.808161 | 3.548668e-50 | -8.615850e-47 |
| Msa1214890 | Msa1437680 | 0.811316 | 7.442394e-51 | -8.615850e-47 |
| Msa1217810 | Msa1437680 | 0.826452 | 2.691426e-54 | -8.615850e-47 |
| Msa1224480 | Msa1437680 | 0.826422 | 2.737054e-54 | -8.615850e-47 |
| Msa0484780 | Msa1437680 | 0.815080 | 1.110281e-51 | -8.615850e-47 |
| Msa0485500 | Msa1437680 | -0.805481 | 1.307491e-49 | -8.615850e-47 |
| Msa0489030 | Msa1437680 | 0.808671 | 2.761963e-50 | -8.615850e-47 |
| Msa0489100 | Msa1437680 | 0.811159 | 8.047170e-51 | -8.615850e-47 |
| Msa0493630 | Msa1437680 | 0.807963 | 3.910147e-50 | -8.615850e-47 |
| Msa0501450 | Msa1437680 | 0.811129 | 8.171150e-51 | -8.615850e-47 |
| Msa0502100 | Msa1437680 | 0.819444 | 1.157569e-52 | -8.615850e-47 |
| Msa0516370 | Msa1437680 | 0.820854 | 5.504395e-53 | -8.615850e-47 |
| Msa0521430 | Msa1437680 | 0.802878 | 4.551603e-49 | -8.615850e-47 |
| Msa0536220 | Msa1437680 | 0.812289 | 4.569788e-51 | -8.615850e-47 |
| Msa0553460 | Msa1437680 | 0.821653 | 3.600293e-53 | -8.615850e-47 |
| Msa0561230 | Msa1437680 | 0.817220 | 3.691279e-52 | -8.615850e-47 |
| Msa0572480 | Msa1437680 | 0.802602 | 5.189189e-49 | -8.615850e-47 |
| Msa0575470 | Msa1437680 | 0.816008 | 6.899923e-52 | -8.615850e-47 |
| Msa0578970 | Msa1437680 | 0.806273 | 8.913589e-50 | -8.615850e-47 |
| Msa0579130 | Msa1437680 | 0.833354 | 5.596622e-56 | -8.615850e-47 |
| Msa0579200 | Msa1437680 | 0.806998 | 6.264539e-50 | -8.615850e-47 |
| Msa0599580 | Msa1437680 | 0.817639 | 2.970812e-52 | -8.615850e-47 |
| Msa0599890 | Msa1437680 | 0.826036 | 3.381972e-54 | -8.615850e-47 |
| Msa0861090 | Msa1437680 | 0.817992 | 2.472348e-52 | -8.615850e-47 |
| Msa0876850 | Msa1437680 | -0.824687 | 7.050748e-54 | -8.615850e-47 |
| Msa0877410 | Msa1437680 | 0.800814 | 1.207800e-48 | -8.615850e-47 |
| Msa0910000 | Msa1437680 | 0.822412 | 2.402464e-53 | -8.615850e-47 |
| Msa0927670 | Msa1437680 | 0.812358 | 4.413567e-51 | -8.615850e-47 |
| Msa0933230 | Msa1437680 | 0.818491 | 1.907118e-52 | -8.615850e-47 |
| Msa0933310 | Msa1437680 | 0.818868 | 1.565401e-52 | -8.615850e-47 |
| Msa0942080 | Msa1437680 | -0.803728 | 3.034661e-49 | -8.615850e-47 |
| Msa0944550 | Msa1437680 | 0.817558 | 3.097760e-52 | -8.615850e-47 |
| Msa0971090 | Msa1437680 | 0.811785 | 5.883127e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437680 | MtrunA17_Chr5g0396491 | 99.168 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 0.0 | 988 |
| Msa1437680 | MtrunA17_Chr4g0038851 | 75.783 | 479 | 108 | 6 | 4 | 481 | 1 | 472 | 0.0 | 741 |
| Msa1437680 | MtrunA17_Chr3g0085681 | 54.139 | 447 | 193 | 5 | 34 | 480 | 4 | 438 | 4.38e-170 | 486 |
| Msa1437680 | MtrunA17_Chr3g0085361 | 55.056 | 356 | 148 | 5 | 125 | 480 | 9 | 352 | 5.06e-134 | 391 |
| Msa1437680 | MtrunA17_Chr7g0224271 | 34.658 | 453 | 209 | 7 | 45 | 478 | 289 | 673 | 4.84e-83 | 270 |
| Msa1437680 | MtrunA17_Chr8g0357601 | 30.682 | 440 | 235 | 10 | 49 | 479 | 175 | 553 | 3.18e-60 | 207 |
| Msa1437680 | MtrunA17_Chr5g0447691 | 30.254 | 433 | 233 | 8 | 53 | 478 | 174 | 544 | 1.82e-59 | 204 |
| Msa1437680 | MtrunA17_Chr4g0057291 | 27.790 | 439 | 245 | 8 | 49 | 477 | 285 | 661 | 2.10e-56 | 199 |
| Msa1437680 | MtrunA17_Chr1g0159461 | 28.605 | 430 | 240 | 7 | 55 | 478 | 224 | 592 | 7.84e-54 | 190 |
| Msa1437680 | MtrunA17_Chr3g0125811 | 28.302 | 424 | 249 | 6 | 55 | 478 | 202 | 570 | 4.35e-52 | 185 |
| Msa1437680 | MtrunA17_Chr4g0031721 | 28.009 | 432 | 237 | 7 | 56 | 477 | 316 | 683 | 6.33e-47 | 172 |
| Msa1437680 | MtrunA17_Chr4g0031701 | 25.959 | 443 | 260 | 6 | 42 | 475 | 240 | 623 | 5.68e-46 | 169 |
| Msa1437680 | MtrunA17_Chr4g0031711 | 27.189 | 434 | 248 | 7 | 53 | 477 | 358 | 732 | 9.28e-46 | 170 |
| Msa1437680 | MtrunA17_Chr4g0057891 | 28.409 | 440 | 244 | 13 | 50 | 479 | 143 | 521 | 1.18e-45 | 166 |
| Msa1437680 | MtrunA17_Chr4g0031741 | 26.620 | 432 | 247 | 7 | 53 | 477 | 281 | 649 | 2.48e-45 | 167 |
| Msa1437680 | MtrunA17_Chr1g0207361 | 91.089 | 101 | 9 | 0 | 282 | 382 | 64 | 164 | 3.65e-44 | 152 |
| Msa1437680 | MtrunA17_Chr1g0207361 | 90.741 | 54 | 5 | 0 | 90 | 143 | 1 | 54 | 2.49e-27 | 107 |
| Msa1437680 | MtrunA17_Chr4g0031731 | 25.734 | 443 | 261 | 7 | 42 | 475 | 240 | 623 | 2.89e-43 | 161 |
| Msa1437680 | MtrunA17_Chr1g0183641 | 29.062 | 437 | 234 | 12 | 48 | 480 | 115 | 479 | 8.06e-43 | 158 |
| Msa1437680 | MtrunA17_Chr2g0328341 | 26.531 | 441 | 258 | 9 | 42 | 477 | 258 | 637 | 1.95e-42 | 159 |
| Msa1437680 | MtrunA17_Chr4g0076091 | 26.512 | 430 | 246 | 10 | 56 | 477 | 175 | 542 | 2.73e-42 | 157 |
| Msa1437680 | MtrunA17_Chr7g0238891 | 27.021 | 433 | 242 | 8 | 56 | 478 | 372 | 740 | 3.42e-42 | 159 |
| Msa1437680 | MtrunA17_Chr2g0328381 | 25.792 | 442 | 262 | 9 | 41 | 477 | 260 | 640 | 2.93e-41 | 156 |
| Msa1437680 | MtrunA17_Chr7g0245601 | 41.146 | 192 | 108 | 2 | 60 | 249 | 442 | 630 | 2.22e-39 | 152 |
| Msa1437680 | MtrunA17_Chr7g0245601 | 38.255 | 149 | 87 | 3 | 333 | 478 | 646 | 792 | 2.45e-23 | 103 |
| Msa1437680 | MtrunA17_Chr2g0294471 | 26.840 | 462 | 257 | 11 | 33 | 478 | 180 | 576 | 2.75e-37 | 144 |
| Msa1437680 | MtrunA17_Chr3g0110971 | 34.685 | 222 | 131 | 3 | 44 | 260 | 207 | 419 | 2.01e-36 | 142 |
| Msa1437680 | MtrunA17_Chr3g0110971 | 37.805 | 164 | 89 | 3 | 328 | 478 | 424 | 587 | 7.25e-30 | 122 |
| Msa1437680 | MtrunA17_Chr2g0306641 | 34.498 | 229 | 132 | 5 | 47 | 266 | 116 | 335 | 6.01e-34 | 134 |
| Msa1437680 | MtrunA17_Chr2g0306641 | 37.423 | 163 | 97 | 2 | 318 | 479 | 330 | 488 | 1.69e-25 | 109 |
| Msa1437680 | MtrunA17_Chr8g0376381 | 34.375 | 224 | 128 | 5 | 44 | 260 | 157 | 368 | 1.48e-33 | 133 |
| Msa1437680 | MtrunA17_Chr8g0376381 | 35.526 | 152 | 95 | 2 | 328 | 478 | 373 | 522 | 9.53e-29 | 119 |
| Msa1437680 | MtrunA17_Chr2g0328401 | 28.457 | 376 | 212 | 9 | 56 | 431 | 290 | 608 | 2.48e-33 | 133 |
| Msa1437680 | MtrunA17_Chr2g0319091 | 35.238 | 210 | 129 | 2 | 53 | 256 | 209 | 417 | 9.25e-32 | 128 |
| Msa1437680 | MtrunA17_Chr2g0319091 | 41.611 | 149 | 86 | 1 | 329 | 477 | 431 | 578 | 2.35e-29 | 121 |
| Msa1437680 | MtrunA17_Chr5g0424131 | 26.096 | 456 | 255 | 11 | 41 | 477 | 106 | 498 | 1.75e-31 | 126 |
| Msa1437680 | MtrunA17_Chr4g0039661 | 25.688 | 436 | 244 | 12 | 53 | 478 | 190 | 555 | 2.67e-29 | 120 |
| Msa1437680 | MtrunA17_Chr5g0445331 | 28.972 | 214 | 144 | 3 | 53 | 258 | 158 | 371 | 2.80e-29 | 120 |
| Msa1437680 | MtrunA17_Chr5g0445331 | 36.879 | 141 | 88 | 1 | 338 | 478 | 393 | 532 | 5.98e-24 | 104 |
| Msa1437680 | MtrunA17_Chr4g0038761 | 28.839 | 267 | 168 | 4 | 60 | 304 | 88 | 354 | 5.08e-29 | 119 |
| Msa1437680 | MtrunA17_Chr4g0038761 | 39.456 | 147 | 87 | 2 | 332 | 478 | 298 | 442 | 3.19e-21 | 96.3 |
| Msa1437680 | MtrunA17_Chr2g0328371 | 25.597 | 293 | 156 | 6 | 139 | 428 | 13 | 246 | 3.33e-28 | 112 |
| Msa1437680 | MtrunA17_Chr2g0328361 | 23.409 | 440 | 248 | 10 | 42 | 477 | 260 | 614 | 1.08e-27 | 116 |
| Msa1437680 | MtrunA17_Chr2g0290241 | 27.178 | 287 | 189 | 7 | 57 | 329 | 58 | 338 | 5.11e-27 | 112 |
| Msa1437680 | MtrunA17_Chr2g0290241 | 34.507 | 142 | 92 | 1 | 338 | 479 | 286 | 426 | 3.43e-21 | 95.9 |
| Msa1437680 | MtrunA17_Chr2g0328391 | 29.048 | 210 | 142 | 2 | 56 | 258 | 299 | 508 | 1.63e-26 | 113 |
| Msa1437680 | MtrunA17_Chr2g0328391 | 28.188 | 149 | 107 | 0 | 329 | 477 | 520 | 668 | 1.98e-18 | 88.6 |
| Msa1437680 | MtrunA17_Chr3g0101141 | 28.302 | 212 | 145 | 2 | 53 | 258 | 172 | 382 | 2.30e-26 | 112 |
| Msa1437680 | MtrunA17_Chr3g0101141 | 36.170 | 141 | 89 | 1 | 338 | 478 | 403 | 542 | 2.54e-25 | 108 |
| Msa1437680 | MtrunA17_Chr1g0194621 | 26.134 | 463 | 254 | 18 | 36 | 478 | 124 | 518 | 4.42e-26 | 111 |
| Msa1437680 | MtrunA17_Chr7g0270031 | 25.877 | 456 | 256 | 13 | 36 | 478 | 168 | 554 | 1.48e-25 | 109 |
| Msa1437680 | MtrunA17_Chr5g0401421 | 24.658 | 438 | 287 | 11 | 56 | 477 | 35 | 445 | 1.53e-25 | 108 |
| Msa1437680 | MtrunA17_Chr4g0053901 | 23.729 | 472 | 285 | 12 | 38 | 477 | 39 | 467 | 2.06e-25 | 108 |
| Msa1437680 | MtrunA17_Chr2g0328411 | 31.100 | 209 | 134 | 2 | 56 | 258 | 289 | 493 | 5.58e-25 | 108 |
| Msa1437680 | MtrunA17_Chr2g0328411 | 30.201 | 149 | 104 | 0 | 329 | 477 | 505 | 653 | 9.51e-18 | 86.3 |
| Msa1437680 | MtrunA17_Chr2g0328431 | 31.100 | 209 | 134 | 2 | 56 | 258 | 289 | 493 | 1.29e-24 | 107 |
| Msa1437680 | MtrunA17_Chr2g0328431 | 29.530 | 149 | 105 | 0 | 329 | 477 | 505 | 653 | 1.87e-16 | 82.4 |
| Msa1437680 | MtrunA17_Chr7g0236851 | 27.586 | 348 | 176 | 10 | 141 | 477 | 374 | 656 | 6.52e-24 | 105 |
| Msa1437680 | MtrunA17_Chr5g0401131 | 29.493 | 217 | 145 | 3 | 50 | 258 | 108 | 324 | 8.92e-24 | 103 |
| Msa1437680 | MtrunA17_Chr5g0401131 | 29.032 | 155 | 103 | 4 | 329 | 478 | 338 | 490 | 3.78e-11 | 65.1 |
| Msa1437680 | MtrunA17_Chr2g0294461 | 34.615 | 156 | 93 | 4 | 328 | 478 | 434 | 585 | 2.98e-22 | 100 |
| Msa1437680 | MtrunA17_Chr2g0294461 | 29.032 | 248 | 160 | 6 | 33 | 264 | 186 | 433 | 2.71e-20 | 94.0 |
| Msa1437680 | MtrunA17_Chr2g0329591 | 26.512 | 215 | 148 | 4 | 47 | 252 | 65 | 278 | 1.14e-20 | 94.4 |
| Msa1437680 | MtrunA17_Chr1g0200401 | 28.205 | 273 | 158 | 9 | 47 | 288 | 71 | 336 | 2.19e-20 | 93.6 |
| Msa1437680 | MtrunA17_Chr1g0200401 | 29.143 | 175 | 106 | 4 | 323 | 479 | 286 | 460 | 5.71e-19 | 89.4 |
| Msa1437680 | MtrunA17_Chr4g0012071 | 22.897 | 428 | 253 | 11 | 57 | 479 | 197 | 552 | 6.48e-20 | 92.8 |
| Msa1437680 | MtrunA17_Chr6g0468561 | 23.570 | 437 | 249 | 12 | 57 | 478 | 296 | 662 | 1.13e-19 | 92.4 |
| Msa1437680 | MtrunA17_Chr3g0114841 | 28.163 | 245 | 136 | 8 | 41 | 255 | 105 | 339 | 2.16e-18 | 87.8 |
| Msa1437680 | MtrunA17_Chr3g0114841 | 31.707 | 164 | 98 | 5 | 321 | 477 | 343 | 499 | 8.02e-14 | 73.6 |
| Msa1437680 | MtrunA17_Chr8g0383981 | 27.536 | 207 | 136 | 8 | 53 | 254 | 136 | 333 | 4.27e-14 | 74.3 |
| Msa1437680 | MtrunA17_Chr3g0087711 | 52.542 | 59 | 28 | 0 | 207 | 265 | 1 | 59 | 8.50e-14 | 65.9 |
| Msa1437680 | MtrunA17_Chr2g0323111 | 26.846 | 149 | 107 | 2 | 329 | 477 | 159 | 305 | 1.05e-13 | 72.0 |
| Msa1437680 | MtrunA17_Chr7g0230731 | 28.205 | 195 | 134 | 2 | 33 | 223 | 349 | 541 | 3.28e-13 | 72.0 |
| Msa1437680 | MtrunA17_Chr7g0230771 | 30.303 | 165 | 113 | 1 | 33 | 197 | 352 | 514 | 5.05e-13 | 71.6 |
| Msa1437680 | MtrunA17_Chr8g0344101 | 23.409 | 440 | 245 | 16 | 50 | 466 | 217 | 587 | 8.53e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437680 | AT1G50420.1 | 65.914 | 487 | 155 | 7 | 1 | 481 | 1 | 482 | 0.0 | 650 |
| Msa1437680 | AT3G54220.1 | 33.484 | 442 | 217 | 10 | 45 | 480 | 282 | 652 | 2.99e-62 | 214 |
| Msa1437680 | AT1G50600.3 | 29.476 | 458 | 251 | 10 | 31 | 478 | 131 | 526 | 5.67e-55 | 192 |
| Msa1437680 | AT1G50600.2 | 29.476 | 458 | 251 | 10 | 31 | 478 | 206 | 601 | 1.76e-54 | 192 |
| Msa1437680 | AT1G50600.1 | 29.476 | 458 | 251 | 10 | 31 | 478 | 202 | 597 | 1.94e-54 | 192 |
| Msa1437680 | AT1G21450.1 | 29.002 | 431 | 238 | 5 | 55 | 478 | 224 | 593 | 4.71e-54 | 191 |
| Msa1437680 | AT4G17230.1 | 26.174 | 447 | 261 | 7 | 39 | 478 | 141 | 525 | 2.78e-46 | 169 |
| Msa1437680 | AT4G17230.2 | 26.174 | 447 | 261 | 7 | 39 | 478 | 141 | 525 | 2.78e-46 | 169 |
| Msa1437680 | AT1G07520.2 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 9.31e-44 | 162 |
| Msa1437680 | AT1G07520.4 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 9.31e-44 | 162 |
| Msa1437680 | AT1G07520.3 | 24.099 | 444 | 268 | 6 | 45 | 477 | 308 | 693 | 4.55e-43 | 162 |
| Msa1437680 | AT1G07520.1 | 24.099 | 444 | 268 | 6 | 45 | 477 | 307 | 692 | 4.56e-43 | 162 |
| Msa1437680 | AT3G46600.2 | 26.097 | 433 | 253 | 6 | 55 | 481 | 3 | 374 | 3.82e-41 | 151 |
| Msa1437680 | AT3G46600.3 | 26.097 | 433 | 253 | 6 | 55 | 481 | 179 | 550 | 4.68e-40 | 152 |
| Msa1437680 | AT3G46600.1 | 26.097 | 433 | 253 | 6 | 55 | 481 | 211 | 582 | 8.58e-40 | 151 |
| Msa1437680 | AT2G29065.1 | 25.513 | 439 | 247 | 10 | 56 | 477 | 252 | 627 | 7.63e-39 | 149 |
| Msa1437680 | AT1G55580.1 | 26.271 | 472 | 237 | 11 | 52 | 478 | 40 | 445 | 7.27e-38 | 144 |
| Msa1437680 | AT1G66350.1 | 35.616 | 219 | 132 | 4 | 44 | 260 | 143 | 354 | 3.05e-36 | 140 |
| Msa1437680 | AT1G66350.1 | 37.179 | 156 | 93 | 2 | 327 | 481 | 358 | 509 | 4.64e-31 | 125 |
| Msa1437680 | AT1G14920.1 | 33.333 | 273 | 147 | 7 | 44 | 288 | 160 | 425 | 9.48e-35 | 137 |
| Msa1437680 | AT1G14920.1 | 34.868 | 152 | 95 | 2 | 328 | 478 | 381 | 529 | 9.23e-27 | 113 |
| Msa1437680 | AT2G01570.1 | 35.683 | 227 | 126 | 5 | 44 | 260 | 212 | 428 | 1.87e-34 | 136 |
| Msa1437680 | AT2G01570.1 | 37.500 | 152 | 91 | 3 | 328 | 478 | 433 | 581 | 5.15e-27 | 114 |
| Msa1437680 | AT5G17490.1 | 34.404 | 218 | 132 | 4 | 47 | 260 | 151 | 361 | 2.46e-34 | 135 |
| Msa1437680 | AT5G17490.1 | 38.562 | 153 | 92 | 2 | 327 | 478 | 365 | 516 | 2.06e-27 | 115 |
| Msa1437680 | AT2G29060.2 | 24.485 | 437 | 249 | 11 | 56 | 477 | 284 | 654 | 8.29e-34 | 135 |
| Msa1437680 | AT2G29060.1 | 24.485 | 437 | 249 | 11 | 56 | 477 | 321 | 691 | 8.52e-34 | 135 |
| Msa1437680 | AT5G48150.1 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.78e-33 | 132 |
| Msa1437680 | AT5G48150.1 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.02e-26 | 113 |
| Msa1437680 | AT5G48150.4 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.78e-33 | 132 |
| Msa1437680 | AT5G48150.4 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.02e-26 | 113 |
| Msa1437680 | AT5G48150.2 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.78e-33 | 132 |
| Msa1437680 | AT5G48150.2 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.02e-26 | 113 |
| Msa1437680 | AT5G48150.3 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.78e-33 | 132 |
| Msa1437680 | AT5G48150.3 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.02e-26 | 113 |
| Msa1437680 | AT5G59450.1 | 26.376 | 436 | 250 | 12 | 53 | 478 | 224 | 598 | 5.03e-33 | 132 |
| Msa1437680 | AT3G03450.1 | 32.287 | 223 | 142 | 4 | 44 | 260 | 171 | 390 | 1.44e-32 | 130 |
| Msa1437680 | AT3G03450.1 | 39.355 | 155 | 92 | 2 | 325 | 478 | 392 | 545 | 2.74e-31 | 127 |
| Msa1437680 | AT1G63100.1 | 32.110 | 218 | 139 | 3 | 48 | 259 | 244 | 458 | 2.78e-32 | 130 |
| Msa1437680 | AT1G63100.1 | 36.196 | 163 | 91 | 3 | 328 | 477 | 466 | 628 | 9.66e-25 | 108 |
| Msa1437680 | AT1G63100.2 | 32.110 | 218 | 139 | 3 | 48 | 259 | 269 | 483 | 2.94e-32 | 130 |
| Msa1437680 | AT1G63100.2 | 36.196 | 163 | 91 | 3 | 328 | 477 | 491 | 653 | 1.29e-24 | 107 |
| Msa1437680 | AT5G41920.1 | 32.020 | 203 | 134 | 3 | 51 | 249 | 38 | 240 | 1.73e-31 | 125 |
| Msa1437680 | AT5G41920.1 | 36.774 | 155 | 91 | 3 | 327 | 480 | 254 | 402 | 1.98e-20 | 93.6 |
| Msa1437680 | AT2G37650.1 | 24.709 | 429 | 255 | 8 | 56 | 478 | 347 | 713 | 4.71e-31 | 127 |
| Msa1437680 | AT2G37650.2 | 24.709 | 429 | 255 | 8 | 56 | 478 | 335 | 701 | 4.92e-31 | 127 |
| Msa1437680 | AT2G04890.1 | 33.491 | 212 | 136 | 3 | 56 | 267 | 53 | 259 | 9.92e-31 | 123 |
| Msa1437680 | AT2G04890.1 | 40.000 | 150 | 89 | 1 | 329 | 478 | 265 | 413 | 9.41e-28 | 115 |
| Msa1437680 | AT5G52510.1 | 25.986 | 431 | 243 | 12 | 61 | 478 | 273 | 640 | 3.64e-29 | 121 |
| Msa1437680 | AT1G07530.1 | 29.858 | 211 | 140 | 3 | 56 | 259 | 396 | 605 | 1.07e-27 | 117 |
| Msa1437680 | AT1G07530.1 | 28.859 | 149 | 106 | 0 | 329 | 477 | 616 | 764 | 7.61e-18 | 87.0 |
| Msa1437680 | AT5G66770.1 | 33.178 | 214 | 130 | 4 | 53 | 259 | 217 | 424 | 1.32e-23 | 104 |
| Msa1437680 | AT5G66770.1 | 32.468 | 154 | 101 | 3 | 328 | 478 | 431 | 584 | 1.68e-16 | 82.8 |
| Msa1437680 | AT4G37650.1 | 26.432 | 227 | 135 | 4 | 56 | 258 | 146 | 364 | 1.54e-22 | 100 |
| Msa1437680 | AT4G37650.1 | 26.415 | 159 | 107 | 3 | 329 | 478 | 372 | 529 | 6.17e-11 | 65.1 |
| Msa1437680 | AT4G08250.1 | 29.596 | 223 | 139 | 7 | 47 | 255 | 98 | 316 | 3.05e-20 | 94.0 |
| Msa1437680 | AT3G50650.1 | 30.876 | 217 | 133 | 4 | 58 | 267 | 177 | 383 | 5.63e-20 | 93.2 |
| Msa1437680 | AT3G50650.1 | 28.859 | 149 | 99 | 3 | 337 | 478 | 394 | 542 | 1.74e-13 | 73.2 |
| Msa1437680 | AT3G49950.1 | 27.461 | 193 | 120 | 4 | 52 | 229 | 26 | 213 | 6.62e-13 | 70.9 |
| Msa1437680 | AT3G49950.1 | 27.517 | 149 | 101 | 3 | 331 | 477 | 264 | 407 | 2.62e-11 | 65.9 |
Find 92 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATTCTTGTGGAATTTA+AGG | 0.089377 | tig0028351:-43742 | None:intergenic |
| TATGCTTTCTGAAGAAATTA+TGG | 0.230947 | tig0028351:+43764 | Msa1437680:CDS |
| TTTGAGTTTCTTGACATAAT+AGG | 0.254589 | tig0028351:-44212 | None:intergenic |
| TGCAGCATTGTTTGATTGTT+TGG | 0.259936 | tig0028351:+44502 | Msa1437680:CDS |
| CAGCTTCTTCAGAAAGCTTA+TGG | 0.264058 | tig0028351:-44022 | None:intergenic |
| TCATCAGCAGAAAGAGGTTT+TGG | 0.271986 | tig0028351:+43989 | Msa1437680:CDS |
| AACATACCATAATAGCTTAA+AGG | 0.277960 | tig0028351:-44692 | None:intergenic |
| ACAATGCTGCATAAGAATAT+AGG | 0.281076 | tig0028351:-44490 | None:intergenic |
| TCAAGCTATTGTTGAATCTA+TGG | 0.285430 | tig0028351:+43845 | Msa1437680:CDS |
| TGCTAAGAACAGGGTTGAAT+TGG | 0.312189 | tig0028351:-44064 | None:intergenic |
| CTCAAATGAGGAGGACCTTC+AGG | 0.312197 | tig0028351:-43954 | None:intergenic |
| TTGTGGAATTTAAGGCTCTA+TGG | 0.321651 | tig0028351:-43734 | None:intergenic |
| ATGAACCAAAACACATCATT+AGG | 0.327281 | tig0028351:+44263 | Msa1437680:CDS |
| ATCTATGGAAGGTGAGAAAA+TGG | 0.335503 | tig0028351:+43860 | Msa1437680:CDS |
| TCTGCAGTTACATTCCCTTT+TGG | 0.339325 | tig0028351:+44154 | Msa1437680:CDS |
| AACATCCCTAGAGAGATTAA+AGG | 0.354098 | tig0028351:+44541 | Msa1437680:CDS |
| AAGCTATTATGGTATGTTGC+AGG | 0.357915 | tig0028351:+44697 | Msa1437680:CDS |
| AATCACCTAATGATGTGTTT+TGG | 0.364016 | tig0028351:-44268 | None:intergenic |
| TAGTAACTTGCTGGCAAGAT+AGG | 0.366004 | tig0028351:+44783 | Msa1437680:CDS |
| CAATGCTGCATAAGAATATA+GGG | 0.366018 | tig0028351:-44489 | None:intergenic |
| GACAAACTTCGTGTGAAAAC+CGG | 0.371883 | tig0028351:+44107 | Msa1437680:CDS |
| AATGTGCCTTTAAGCTATTA+TGG | 0.377946 | tig0028351:+44686 | Msa1437680:CDS |
| AGACTTGATTCGTGTGGATT+TGG | 0.381293 | tig0028351:+44662 | Msa1437680:CDS |
| TGTGCAAATCATGTAGCTTC+TGG | 0.411195 | tig0028351:+43576 | Msa1437680:CDS |
| TCACCTAGCATAGGAGGAAT+AGG | 0.416008 | tig0028351:+43477 | Msa1437680:CDS |
| TATAGAATGAGAGAAGAAAA+TGG | 0.416830 | tig0028351:+44755 | Msa1437680:CDS |
| CTGATAGGATACTTAAAACT+TGG | 0.427400 | tig0028351:+43703 | Msa1437680:CDS |
| AGAAGGTTTCTACAGAGTTA+TGG | 0.432910 | tig0028351:+44722 | Msa1437680:CDS |
| TCACTGAAGCACTTGCTGAT+AGG | 0.433040 | tig0028351:+43688 | Msa1437680:CDS |
| ATGGTTGTGTAGTAACTTGC+TGG | 0.448692 | tig0028351:+44774 | Msa1437680:CDS |
| TCGGTTACAACCATGACTTT+TGG | 0.460163 | tig0028351:-44416 | None:intergenic |
| TCACAACGGTTCAACATTGA+TGG | 0.461983 | tig0028351:+44451 | Msa1437680:CDS |
| TTGCACAAGTGATTAACAAA+TGG | 0.462673 | tig0028351:-43560 | None:intergenic |
| CAACAACAGCTTGGAGAGCT+AGG | 0.464849 | tig0028351:+44816 | Msa1437680:CDS |
| TCTCAACCTTTAATCTCTCT+AGG | 0.466126 | tig0028351:-44547 | None:intergenic |
| ATTCATCATCCAAGGCCAAA+AGG | 0.470579 | tig0028351:-44169 | None:intergenic |
| GATGATGTTGAATCGGGACT+TGG | 0.470973 | tig0028351:-44323 | None:intergenic |
| GTTGTGATTCGAGTCCTGTT+CGG | 0.477667 | tig0028351:-44435 | None:intergenic |
| GAATCTATGTTACAAGAAGA+AGG | 0.480629 | tig0028351:+43402 | Msa1437680:CDS |
| AGAATTGAAATCTGAGGAAA+GGG | 0.483022 | tig0028351:+43524 | Msa1437680:CDS |
| ATATATGCCACCTTCAAGAA+AGG | 0.483743 | tig0028351:-43813 | None:intergenic |
| ATTATGTCAAGAAACTCAAA+TGG | 0.483850 | tig0028351:+44215 | Msa1437680:CDS |
| CCTCCTCATTTGAGAATCAC+AGG | 0.490720 | tig0028351:+43963 | Msa1437680:CDS |
| AAGGTTGAGAAGATGCTGTT+TGG | 0.498109 | tig0028351:+44560 | Msa1437680:CDS |
| AGAAAGCATAATAATTCTTG+TGG | 0.500494 | tig0028351:-43751 | None:intergenic |
| CTCTGCATAGTGTCTCCATC+AGG | 0.502156 | tig0028351:-43651 | None:intergenic |
| AGTCATGGTTGTAACCGAAC+AGG | 0.503090 | tig0028351:+44421 | Msa1437680:CDS |
| CGACGATGATGATGTTGAAT+CGG | 0.503259 | tig0028351:-44330 | None:intergenic |
| GCTAGGTGAAACTGACATCA+TGG | 0.505670 | tig0028351:-43463 | None:intergenic |
| GAGAATTGAAATCTGAGGAA+AGG | 0.506938 | tig0028351:+43523 | Msa1437680:CDS |
| TCTCTACTAAGCCATGGATA+AGG | 0.507017 | tig0028351:-43504 | None:intergenic |
| AGGATACTTAAAACTTGGCC+TGG | 0.515401 | tig0028351:+43708 | Msa1437680:CDS |
| CTACAGAGTTATGGTTGTGA+GGG | 0.516522 | tig0028351:+44731 | Msa1437680:CDS |
| TCACAGCTTGCAACTCCTGA+TGG | 0.516747 | tig0028351:+43636 | Msa1437680:CDS |
| TTCATCATCCAAGGCCAAAA+GGG | 0.519127 | tig0028351:-44168 | None:intergenic |
| TTCAATTCTCTACTAAGCCA+TGG | 0.520245 | tig0028351:-43510 | None:intergenic |
| CTCAACCTTTAATCTCTCTA+GGG | 0.522051 | tig0028351:-44546 | None:intergenic |
| TATATGCCACCTTCAAGAAA+GGG | 0.525767 | tig0028351:-43812 | None:intergenic |
| TTGTGAAGGAGCTGAAAGAA+AGG | 0.532875 | tig0028351:+44607 | Msa1437680:CDS |
| AAAAGAGCAATCCATTGTGC+AGG | 0.535750 | tig0028351:-43912 | None:intergenic |
| AGGGATTCATCAGCAGAAAG+AGG | 0.542783 | tig0028351:+43983 | Msa1437680:CDS |
| TTCATCTGCTTCAATGAATG+TGG | 0.545313 | tig0028351:+44361 | Msa1437680:CDS |
| TTTAAGGCTCTATGGAGTCC+AGG | 0.546774 | tig0028351:-43726 | None:intergenic |
| ACTAATTGCAAGCGCCTCGC+CGG | 0.552940 | tig0028351:-44126 | None:intergenic |
| GACGATGATGATGTTGAATC+GGG | 0.555408 | tig0028351:-44329 | None:intergenic |
| ATGGTATGTTGCAGGCAAGA+AGG | 0.557823 | tig0028351:+44705 | Msa1437680:CDS |
| GATCCTATTCCTCCTATGCT+AGG | 0.562234 | tig0028351:-43480 | None:intergenic |
| TCAGTTTCACCTAGCATAGG+AGG | 0.562988 | tig0028351:+43471 | Msa1437680:CDS |
| AGAACAGGGTTGAATTGGAA+TGG | 0.565131 | tig0028351:-44059 | None:intergenic |
| TCTACAGAGTTATGGTTGTG+AGG | 0.567967 | tig0028351:+44730 | Msa1437680:CDS |
| ATTGAAGCAGATGAAGATGC+TGG | 0.572949 | tig0028351:-44353 | None:intergenic |
| GAGTTTGTCACCAAAAGTCA+TGG | 0.575658 | tig0028351:+44406 | Msa1437680:CDS |
| AAGAACATAATTGCTTGTGA+AGG | 0.580873 | tig0028351:+44593 | Msa1437680:CDS |
| ATCCCTGTGATTCTCAAATG+AGG | 0.584689 | tig0028351:-43966 | None:intergenic |
| TGAGGATGATTCATCATCCA+AGG | 0.589137 | tig0028351:-44177 | None:intergenic |
| AATCTATGTTACAAGAAGAA+GGG | 0.598643 | tig0028351:+43403 | Msa1437680:CDS |
| GAATAGGATCACCTTATCCA+TGG | 0.599511 | tig0028351:+43493 | Msa1437680:CDS |
| GCTATTGTTGAATCTATGGA+AGG | 0.607832 | tig0028351:+43849 | Msa1437680:CDS |
| TGAGAAGATGCTGTTTGGTG+AGG | 0.611876 | tig0028351:+44565 | Msa1437680:CDS |
| ATGTCAGTTTCACCTAGCAT+AGG | 0.614550 | tig0028351:+43468 | Msa1437680:CDS |
| ATCATGGAAAATAACTGTAG+AGG | 0.617197 | tig0028351:-43447 | None:intergenic |
| CTCCTCATTTGAGAATCACA+GGG | 0.617281 | tig0028351:+43964 | Msa1437680:CDS |
| TTTCTAGCTTGCTAAGAACA+GGG | 0.622441 | tig0028351:-44073 | None:intergenic |
| ACGGTTCAACATTGATGGAG+AGG | 0.639461 | tig0028351:+44456 | Msa1437680:CDS |
| TAGTAGAGAATTGAAATCTG+AGG | 0.644490 | tig0028351:+43518 | Msa1437680:CDS |
| TGGATGATGAATCATCCTCA+AGG | 0.648643 | tig0028351:+44180 | Msa1437680:CDS |
| ATGCTGCTGAACCTGCACAA+TGG | 0.650823 | tig0028351:+43901 | Msa1437680:CDS |
| GAATTGAAATCTGAGGAAAG+GGG | 0.651416 | tig0028351:+43525 | Msa1437680:CDS |
| TTTATGAGACTTGATTCGTG+TGG | 0.658284 | tig0028351:+44656 | Msa1437680:CDS |
| CCTGTGATTCTCAAATGAGG+AGG | 0.663636 | tig0028351:-43963 | None:intergenic |
| ACTTCGTGTGAAAACCGGCG+AGG | 0.733150 | tig0028351:+44112 | Msa1437680:CDS |
| GAACAGGACTCGAATCACAA+CGG | 0.767714 | tig0028351:+44437 | Msa1437680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTCTTGTGGAATTTA+AGG | - | tig0028351:43745-43764 | None:intergenic | 20.0% |
| !! | TGATTTACTTGAAAAAGATA+TGG | + | tig0028351:44286-44305 | Msa1437680:CDS | 20.0% |
| !! | AATAATTCTTGTGGAATTTA+AGG | - | tig0028351:43745-43764 | None:intergenic | 20.0% |
| !! | TGATTTACTTGAAAAAGATA+TGG | + | tig0028351:44286-44305 | Msa1437680:CDS | 20.0% |
| ! | AATCTATGTTACAAGAAGAA+GGG | + | tig0028351:43403-43422 | Msa1437680:CDS | 25.0% |
| !! | AGAAAGCATAATAATTCTTG+TGG | - | tig0028351:43754-43773 | None:intergenic | 25.0% |
| !! | TATGCTTTCTGAAGAAATTA+TGG | + | tig0028351:43764-43783 | Msa1437680:CDS | 25.0% |
| !! | TTTGAGTTTCTTGACATAAT+AGG | - | tig0028351:44215-44234 | None:intergenic | 25.0% |
| ! | ATTATGTCAAGAAACTCAAA+TGG | + | tig0028351:44215-44234 | Msa1437680:CDS | 25.0% |
| ! | CTTGAAAAAGATATGGTTAA+TGG | + | tig0028351:44293-44312 | Msa1437680:CDS | 25.0% |
| ! | GACATGAAAAACTTGATAAA+TGG | + | tig0028351:44633-44652 | Msa1437680:CDS | 25.0% |
| ! | AACATACCATAATAGCTTAA+AGG | - | tig0028351:44695-44714 | None:intergenic | 25.0% |
| ! | TATAGAATGAGAGAAGAAAA+TGG | + | tig0028351:44755-44774 | Msa1437680:CDS | 25.0% |
| ! | AATCTATGTTACAAGAAGAA+GGG | + | tig0028351:43403-43422 | Msa1437680:CDS | 25.0% |
| !! | AGAAAGCATAATAATTCTTG+TGG | - | tig0028351:43754-43773 | None:intergenic | 25.0% |
| !! | TATGCTTTCTGAAGAAATTA+TGG | + | tig0028351:43764-43783 | Msa1437680:CDS | 25.0% |
| !! | TTTGAGTTTCTTGACATAAT+AGG | - | tig0028351:44215-44234 | None:intergenic | 25.0% |
| ! | ATTATGTCAAGAAACTCAAA+TGG | + | tig0028351:44215-44234 | Msa1437680:CDS | 25.0% |
| ! | CTTGAAAAAGATATGGTTAA+TGG | + | tig0028351:44293-44312 | Msa1437680:CDS | 25.0% |
| ! | GACATGAAAAACTTGATAAA+TGG | + | tig0028351:44633-44652 | Msa1437680:CDS | 25.0% |
| ! | AACATACCATAATAGCTTAA+AGG | - | tig0028351:44695-44714 | None:intergenic | 25.0% |
| ! | TATAGAATGAGAGAAGAAAA+TGG | + | tig0028351:44755-44774 | Msa1437680:CDS | 25.0% |
| GAATCTATGTTACAAGAAGA+AGG | + | tig0028351:43402-43421 | Msa1437680:CDS | 30.0% | |
| ATCATGGAAAATAACTGTAG+AGG | - | tig0028351:43450-43469 | None:intergenic | 30.0% | |
| TAGTAGAGAATTGAAATCTG+AGG | + | tig0028351:43518-43537 | Msa1437680:CDS | 30.0% | |
| AGAATTGAAATCTGAGGAAA+GGG | + | tig0028351:43524-43543 | Msa1437680:CDS | 30.0% | |
| TTGCACAAGTGATTAACAAA+TGG | - | tig0028351:43563-43582 | None:intergenic | 30.0% | |
| CTGATAGGATACTTAAAACT+TGG | + | tig0028351:43703-43722 | Msa1437680:CDS | 30.0% | |
| TCAAGCTATTGTTGAATCTA+TGG | + | tig0028351:43845-43864 | Msa1437680:CDS | 30.0% | |
| !!! | TGTGTTTTGGTTCATAAACA+TGG | - | tig0028351:44258-44277 | None:intergenic | 30.0% |
| ATGAACCAAAACACATCATT+AGG | + | tig0028351:44263-44282 | Msa1437680:CDS | 30.0% | |
| ! | AATCACCTAATGATGTGTTT+TGG | - | tig0028351:44271-44290 | None:intergenic | 30.0% |
| ! | AGAGTTTTCTCAATGCTTTA+TGG | + | tig0028351:44384-44403 | Msa1437680:CDS | 30.0% |
| CAATGCTGCATAAGAATATA+GGG | - | tig0028351:44492-44511 | None:intergenic | 30.0% | |
| ACAATGCTGCATAAGAATAT+AGG | - | tig0028351:44493-44512 | None:intergenic | 30.0% | |
| AAGAACATAATTGCTTGTGA+AGG | + | tig0028351:44593-44612 | Msa1437680:CDS | 30.0% | |
| AATGTGCCTTTAAGCTATTA+TGG | + | tig0028351:44686-44705 | Msa1437680:CDS | 30.0% | |
| GAATCTATGTTACAAGAAGA+AGG | + | tig0028351:43402-43421 | Msa1437680:CDS | 30.0% | |
| ATCATGGAAAATAACTGTAG+AGG | - | tig0028351:43450-43469 | None:intergenic | 30.0% | |
| TAGTAGAGAATTGAAATCTG+AGG | + | tig0028351:43518-43537 | Msa1437680:CDS | 30.0% | |
| AGAATTGAAATCTGAGGAAA+GGG | + | tig0028351:43524-43543 | Msa1437680:CDS | 30.0% | |
| TTGCACAAGTGATTAACAAA+TGG | - | tig0028351:43563-43582 | None:intergenic | 30.0% | |
| CTGATAGGATACTTAAAACT+TGG | + | tig0028351:43703-43722 | Msa1437680:CDS | 30.0% | |
| TCAAGCTATTGTTGAATCTA+TGG | + | tig0028351:43845-43864 | Msa1437680:CDS | 30.0% | |
| !!! | TGTGTTTTGGTTCATAAACA+TGG | - | tig0028351:44258-44277 | None:intergenic | 30.0% |
| ATGAACCAAAACACATCATT+AGG | + | tig0028351:44263-44282 | Msa1437680:CDS | 30.0% | |
| ! | AATCACCTAATGATGTGTTT+TGG | - | tig0028351:44271-44290 | None:intergenic | 30.0% |
| ! | AGAGTTTTCTCAATGCTTTA+TGG | + | tig0028351:44384-44403 | Msa1437680:CDS | 30.0% |
| CAATGCTGCATAAGAATATA+GGG | - | tig0028351:44492-44511 | None:intergenic | 30.0% | |
| ACAATGCTGCATAAGAATAT+AGG | - | tig0028351:44493-44512 | None:intergenic | 30.0% | |
| AAGAACATAATTGCTTGTGA+AGG | + | tig0028351:44593-44612 | Msa1437680:CDS | 30.0% | |
| AATGTGCCTTTAAGCTATTA+TGG | + | tig0028351:44686-44705 | Msa1437680:CDS | 30.0% | |
| TTCAATTCTCTACTAAGCCA+TGG | - | tig0028351:43513-43532 | None:intergenic | 35.0% | |
| GAGAATTGAAATCTGAGGAA+AGG | + | tig0028351:43523-43542 | Msa1437680:CDS | 35.0% | |
| GAATTGAAATCTGAGGAAAG+GGG | + | tig0028351:43525-43544 | Msa1437680:CDS | 35.0% | |
| ! | TTGTGGAATTTAAGGCTCTA+TGG | - | tig0028351:43737-43756 | None:intergenic | 35.0% |
| TATATGCCACCTTCAAGAAA+GGG | - | tig0028351:43815-43834 | None:intergenic | 35.0% | |
| ATATATGCCACCTTCAAGAA+AGG | - | tig0028351:43816-43835 | None:intergenic | 35.0% | |
| GCTATTGTTGAATCTATGGA+AGG | + | tig0028351:43849-43868 | Msa1437680:CDS | 35.0% | |
| ATCTATGGAAGGTGAGAAAA+TGG | + | tig0028351:43860-43879 | Msa1437680:CDS | 35.0% | |
| !!! | AAAGAGGTTTTGGAGCAAAT+GGG | + | tig0028351:43999-44018 | Msa1437680:CDS | 35.0% |
| !! | TTTCTAGCTTGCTAAGAACA+GGG | - | tig0028351:44076-44095 | None:intergenic | 35.0% |
| !!! | TTTTCTAGCTTGCTAAGAAC+AGG | - | tig0028351:44077-44096 | None:intergenic | 35.0% |
| ! | AATAGGAGTTTTTCTCCTTG+AGG | - | tig0028351:44198-44217 | None:intergenic | 35.0% |
| ! | TCATAAACATGGCTTTTTGC+AGG | - | tig0028351:44247-44266 | None:intergenic | 35.0% |
| TTCATCTGCTTCAATGAATG+TGG | + | tig0028351:44361-44380 | Msa1437680:CDS | 35.0% | |
| TGCAGCATTGTTTGATTGTT+TGG | + | tig0028351:44502-44521 | Msa1437680:CDS | 35.0% | |
| AACATCCCTAGAGAGATTAA+AGG | + | tig0028351:44541-44560 | Msa1437680:CDS | 35.0% | |
| CTCAACCTTTAATCTCTCTA+GGG | - | tig0028351:44549-44568 | None:intergenic | 35.0% | |
| TCTCAACCTTTAATCTCTCT+AGG | - | tig0028351:44550-44569 | None:intergenic | 35.0% | |
| ! | TTTATGAGACTTGATTCGTG+TGG | + | tig0028351:44656-44675 | Msa1437680:CDS | 35.0% |
| AAGCTATTATGGTATGTTGC+AGG | + | tig0028351:44697-44716 | Msa1437680:CDS | 35.0% | |
| AGAAGGTTTCTACAGAGTTA+TGG | + | tig0028351:44722-44741 | Msa1437680:CDS | 35.0% | |
| !!! | CTTTGTTTTCAACAACAGCT+TGG | + | tig0028351:44807-44826 | Msa1437680:CDS | 35.0% |
| TTCAATTCTCTACTAAGCCA+TGG | - | tig0028351:43513-43532 | None:intergenic | 35.0% | |
| GAGAATTGAAATCTGAGGAA+AGG | + | tig0028351:43523-43542 | Msa1437680:CDS | 35.0% | |
| GAATTGAAATCTGAGGAAAG+GGG | + | tig0028351:43525-43544 | Msa1437680:CDS | 35.0% | |
| ! | TTGTGGAATTTAAGGCTCTA+TGG | - | tig0028351:43737-43756 | None:intergenic | 35.0% |
| TATATGCCACCTTCAAGAAA+GGG | - | tig0028351:43815-43834 | None:intergenic | 35.0% | |
| ATATATGCCACCTTCAAGAA+AGG | - | tig0028351:43816-43835 | None:intergenic | 35.0% | |
| GCTATTGTTGAATCTATGGA+AGG | + | tig0028351:43849-43868 | Msa1437680:CDS | 35.0% | |
| ATCTATGGAAGGTGAGAAAA+TGG | + | tig0028351:43860-43879 | Msa1437680:CDS | 35.0% | |
| !!! | AAAGAGGTTTTGGAGCAAAT+GGG | + | tig0028351:43999-44018 | Msa1437680:CDS | 35.0% |
| !! | TTTCTAGCTTGCTAAGAACA+GGG | - | tig0028351:44076-44095 | None:intergenic | 35.0% |
| !!! | TTTTCTAGCTTGCTAAGAAC+AGG | - | tig0028351:44077-44096 | None:intergenic | 35.0% |
| ! | AATAGGAGTTTTTCTCCTTG+AGG | - | tig0028351:44198-44217 | None:intergenic | 35.0% |
| ! | TCATAAACATGGCTTTTTGC+AGG | - | tig0028351:44247-44266 | None:intergenic | 35.0% |
| TTCATCTGCTTCAATGAATG+TGG | + | tig0028351:44361-44380 | Msa1437680:CDS | 35.0% | |
| TGCAGCATTGTTTGATTGTT+TGG | + | tig0028351:44502-44521 | Msa1437680:CDS | 35.0% | |
| AACATCCCTAGAGAGATTAA+AGG | + | tig0028351:44541-44560 | Msa1437680:CDS | 35.0% | |
| CTCAACCTTTAATCTCTCTA+GGG | - | tig0028351:44549-44568 | None:intergenic | 35.0% | |
| TCTCAACCTTTAATCTCTCT+AGG | - | tig0028351:44550-44569 | None:intergenic | 35.0% | |
| ! | TTTATGAGACTTGATTCGTG+TGG | + | tig0028351:44656-44675 | Msa1437680:CDS | 35.0% |
| AAGCTATTATGGTATGTTGC+AGG | + | tig0028351:44697-44716 | Msa1437680:CDS | 35.0% | |
| AGAAGGTTTCTACAGAGTTA+TGG | + | tig0028351:44722-44741 | Msa1437680:CDS | 35.0% | |
| !!! | CTTTGTTTTCAACAACAGCT+TGG | + | tig0028351:44807-44826 | Msa1437680:CDS | 35.0% |
| ATGTCAGTTTCACCTAGCAT+AGG | + | tig0028351:43468-43487 | Msa1437680:CDS | 40.0% | |
| GAATAGGATCACCTTATCCA+TGG | + | tig0028351:43493-43512 | Msa1437680:CDS | 40.0% | |
| TCTCTACTAAGCCATGGATA+AGG | - | tig0028351:43507-43526 | None:intergenic | 40.0% | |
| TGTGCAAATCATGTAGCTTC+TGG | + | tig0028351:43576-43595 | Msa1437680:CDS | 40.0% | |
| AGGATACTTAAAACTTGGCC+TGG | + | tig0028351:43708-43727 | Msa1437680:CDS | 40.0% | |
| ! | TGAGCTTTTCCCTTTCTTGA+AGG | + | tig0028351:43803-43822 | Msa1437680:CDS | 40.0% |
| AAAAGAGCAATCCATTGTGC+AGG | - | tig0028351:43915-43934 | None:intergenic | 40.0% | |
| CTCCTCATTTGAGAATCACA+GGG | + | tig0028351:43964-43983 | Msa1437680:CDS | 40.0% | |
| ATCCCTGTGATTCTCAAATG+AGG | - | tig0028351:43969-43988 | None:intergenic | 40.0% | |
| ! | TCATCAGCAGAAAGAGGTTT+TGG | + | tig0028351:43989-44008 | Msa1437680:CDS | 40.0% |
| !!! | GAAAGAGGTTTTGGAGCAAA+TGG | + | tig0028351:43998-44017 | Msa1437680:CDS | 40.0% |
| CAGCTTCTTCAGAAAGCTTA+TGG | - | tig0028351:44025-44044 | None:intergenic | 40.0% | |
| AGAACAGGGTTGAATTGGAA+TGG | - | tig0028351:44062-44081 | None:intergenic | 40.0% | |
| TGCTAAGAACAGGGTTGAAT+TGG | - | tig0028351:44067-44086 | None:intergenic | 40.0% | |
| GACAAACTTCGTGTGAAAAC+CGG | + | tig0028351:44107-44126 | Msa1437680:CDS | 40.0% | |
| ! | TCTGCAGTTACATTCCCTTT+TGG | + | tig0028351:44154-44173 | Msa1437680:CDS | 40.0% |
| TTCATCATCCAAGGCCAAAA+GGG | - | tig0028351:44171-44190 | None:intergenic | 40.0% | |
| ATTCATCATCCAAGGCCAAA+AGG | - | tig0028351:44172-44191 | None:intergenic | 40.0% | |
| TGAGGATGATTCATCATCCA+AGG | - | tig0028351:44180-44199 | None:intergenic | 40.0% | |
| TGGATGATGAATCATCCTCA+AGG | + | tig0028351:44180-44199 | Msa1437680:CDS | 40.0% | |
| ! | GACGATGATGATGTTGAATC+GGG | - | tig0028351:44332-44351 | None:intergenic | 40.0% |
| ! | CGACGATGATGATGTTGAAT+CGG | - | tig0028351:44333-44352 | None:intergenic | 40.0% |
| ATTGAAGCAGATGAAGATGC+TGG | - | tig0028351:44356-44375 | None:intergenic | 40.0% | |
| GAGTTTGTCACCAAAAGTCA+TGG | + | tig0028351:44406-44425 | Msa1437680:CDS | 40.0% | |
| ! | TCGGTTACAACCATGACTTT+TGG | - | tig0028351:44419-44438 | None:intergenic | 40.0% |
| TCACAACGGTTCAACATTGA+TGG | + | tig0028351:44451-44470 | Msa1437680:CDS | 40.0% | |
| AAGGTTGAGAAGATGCTGTT+TGG | + | tig0028351:44560-44579 | Msa1437680:CDS | 40.0% | |
| TTGTGAAGGAGCTGAAAGAA+AGG | + | tig0028351:44607-44626 | Msa1437680:CDS | 40.0% | |
| ! | AGACTTGATTCGTGTGGATT+TGG | + | tig0028351:44662-44681 | Msa1437680:CDS | 40.0% |
| TCTACAGAGTTATGGTTGTG+AGG | + | tig0028351:44730-44749 | Msa1437680:CDS | 40.0% | |
| CTACAGAGTTATGGTTGTGA+GGG | + | tig0028351:44731-44750 | Msa1437680:CDS | 40.0% | |
| ! | ATGGTTGTGTAGTAACTTGC+TGG | + | tig0028351:44774-44793 | Msa1437680:CDS | 40.0% |
| !! | TAGTAACTTGCTGGCAAGAT+AGG | + | tig0028351:44783-44802 | Msa1437680:CDS | 40.0% |
| ATGTCAGTTTCACCTAGCAT+AGG | + | tig0028351:43468-43487 | Msa1437680:CDS | 40.0% | |
| GAATAGGATCACCTTATCCA+TGG | + | tig0028351:43493-43512 | Msa1437680:CDS | 40.0% | |
| TCTCTACTAAGCCATGGATA+AGG | - | tig0028351:43507-43526 | None:intergenic | 40.0% | |
| TGTGCAAATCATGTAGCTTC+TGG | + | tig0028351:43576-43595 | Msa1437680:CDS | 40.0% | |
| AGGATACTTAAAACTTGGCC+TGG | + | tig0028351:43708-43727 | Msa1437680:CDS | 40.0% | |
| ! | TGAGCTTTTCCCTTTCTTGA+AGG | + | tig0028351:43803-43822 | Msa1437680:CDS | 40.0% |
| AAAAGAGCAATCCATTGTGC+AGG | - | tig0028351:43915-43934 | None:intergenic | 40.0% | |
| CTCCTCATTTGAGAATCACA+GGG | + | tig0028351:43964-43983 | Msa1437680:CDS | 40.0% | |
| ATCCCTGTGATTCTCAAATG+AGG | - | tig0028351:43969-43988 | None:intergenic | 40.0% | |
| ! | TCATCAGCAGAAAGAGGTTT+TGG | + | tig0028351:43989-44008 | Msa1437680:CDS | 40.0% |
| !!! | GAAAGAGGTTTTGGAGCAAA+TGG | + | tig0028351:43998-44017 | Msa1437680:CDS | 40.0% |
| CAGCTTCTTCAGAAAGCTTA+TGG | - | tig0028351:44025-44044 | None:intergenic | 40.0% | |
| AGAACAGGGTTGAATTGGAA+TGG | - | tig0028351:44062-44081 | None:intergenic | 40.0% | |
| TGCTAAGAACAGGGTTGAAT+TGG | - | tig0028351:44067-44086 | None:intergenic | 40.0% | |
| GACAAACTTCGTGTGAAAAC+CGG | + | tig0028351:44107-44126 | Msa1437680:CDS | 40.0% | |
| ! | TCTGCAGTTACATTCCCTTT+TGG | + | tig0028351:44154-44173 | Msa1437680:CDS | 40.0% |
| TTCATCATCCAAGGCCAAAA+GGG | - | tig0028351:44171-44190 | None:intergenic | 40.0% | |
| ATTCATCATCCAAGGCCAAA+AGG | - | tig0028351:44172-44191 | None:intergenic | 40.0% | |
| TGAGGATGATTCATCATCCA+AGG | - | tig0028351:44180-44199 | None:intergenic | 40.0% | |
| TGGATGATGAATCATCCTCA+AGG | + | tig0028351:44180-44199 | Msa1437680:CDS | 40.0% | |
| ! | GACGATGATGATGTTGAATC+GGG | - | tig0028351:44332-44351 | None:intergenic | 40.0% |
| ! | CGACGATGATGATGTTGAAT+CGG | - | tig0028351:44333-44352 | None:intergenic | 40.0% |
| ATTGAAGCAGATGAAGATGC+TGG | - | tig0028351:44356-44375 | None:intergenic | 40.0% | |
| GAGTTTGTCACCAAAAGTCA+TGG | + | tig0028351:44406-44425 | Msa1437680:CDS | 40.0% | |
| ! | TCGGTTACAACCATGACTTT+TGG | - | tig0028351:44419-44438 | None:intergenic | 40.0% |
| TCACAACGGTTCAACATTGA+TGG | + | tig0028351:44451-44470 | Msa1437680:CDS | 40.0% | |
| AAGGTTGAGAAGATGCTGTT+TGG | + | tig0028351:44560-44579 | Msa1437680:CDS | 40.0% | |
| TTGTGAAGGAGCTGAAAGAA+AGG | + | tig0028351:44607-44626 | Msa1437680:CDS | 40.0% | |
| ! | AGACTTGATTCGTGTGGATT+TGG | + | tig0028351:44662-44681 | Msa1437680:CDS | 40.0% |
| TCTACAGAGTTATGGTTGTG+AGG | + | tig0028351:44730-44749 | Msa1437680:CDS | 40.0% | |
| CTACAGAGTTATGGTTGTGA+GGG | + | tig0028351:44731-44750 | Msa1437680:CDS | 40.0% | |
| ! | ATGGTTGTGTAGTAACTTGC+TGG | + | tig0028351:44774-44793 | Msa1437680:CDS | 40.0% |
| !! | TAGTAACTTGCTGGCAAGAT+AGG | + | tig0028351:44783-44802 | Msa1437680:CDS | 40.0% |
| GCTAGGTGAAACTGACATCA+TGG | - | tig0028351:43466-43485 | None:intergenic | 45.0% | |
| TCAGTTTCACCTAGCATAGG+AGG | + | tig0028351:43471-43490 | Msa1437680:CDS | 45.0% | |
| TCACCTAGCATAGGAGGAAT+AGG | + | tig0028351:43477-43496 | Msa1437680:CDS | 45.0% | |
| GATCCTATTCCTCCTATGCT+AGG | - | tig0028351:43483-43502 | None:intergenic | 45.0% | |
| ! | TCACTGAAGCACTTGCTGAT+AGG | + | tig0028351:43688-43707 | Msa1437680:CDS | 45.0% |
| ! | TTTAAGGCTCTATGGAGTCC+AGG | - | tig0028351:43729-43748 | None:intergenic | 45.0% |
| ! | GCTTTTCCCTTTCTTGAAGG+TGG | + | tig0028351:43806-43825 | Msa1437680:CDS | 45.0% |
| !! | GTTTTGAGTGCAAGACCTGA+AGG | + | tig0028351:43939-43958 | Msa1437680:CDS | 45.0% |
| CCTGTGATTCTCAAATGAGG+AGG | - | tig0028351:43966-43985 | None:intergenic | 45.0% | |
| CCTCCTCATTTGAGAATCAC+AGG | + | tig0028351:43963-43982 | Msa1437680:CDS | 45.0% | |
| AGGGATTCATCAGCAGAAAG+AGG | + | tig0028351:43983-44002 | Msa1437680:CDS | 45.0% | |
| ! | GTTACATTCCCTTTTGGCCT+TGG | + | tig0028351:44160-44179 | Msa1437680:CDS | 45.0% |
| GATGATGTTGAATCGGGACT+TGG | - | tig0028351:44326-44345 | None:intergenic | 45.0% | |
| AGTCATGGTTGTAACCGAAC+AGG | + | tig0028351:44421-44440 | Msa1437680:CDS | 45.0% | |
| GTTGTGATTCGAGTCCTGTT+CGG | - | tig0028351:44438-44457 | None:intergenic | 45.0% | |
| GAACAGGACTCGAATCACAA+CGG | + | tig0028351:44437-44456 | Msa1437680:CDS | 45.0% | |
| ACGGTTCAACATTGATGGAG+AGG | + | tig0028351:44456-44475 | Msa1437680:CDS | 45.0% | |
| ! | TGAGAAGATGCTGTTTGGTG+AGG | + | tig0028351:44565-44584 | Msa1437680:CDS | 45.0% |
| ATGGTATGTTGCAGGCAAGA+AGG | + | tig0028351:44705-44724 | Msa1437680:CDS | 45.0% | |
| GCTAGGTGAAACTGACATCA+TGG | - | tig0028351:43466-43485 | None:intergenic | 45.0% | |
| TCAGTTTCACCTAGCATAGG+AGG | + | tig0028351:43471-43490 | Msa1437680:CDS | 45.0% | |
| TCACCTAGCATAGGAGGAAT+AGG | + | tig0028351:43477-43496 | Msa1437680:CDS | 45.0% | |
| GATCCTATTCCTCCTATGCT+AGG | - | tig0028351:43483-43502 | None:intergenic | 45.0% | |
| ! | TCACTGAAGCACTTGCTGAT+AGG | + | tig0028351:43688-43707 | Msa1437680:CDS | 45.0% |
| ! | TTTAAGGCTCTATGGAGTCC+AGG | - | tig0028351:43729-43748 | None:intergenic | 45.0% |
| ! | GCTTTTCCCTTTCTTGAAGG+TGG | + | tig0028351:43806-43825 | Msa1437680:CDS | 45.0% |
| !! | GTTTTGAGTGCAAGACCTGA+AGG | + | tig0028351:43939-43958 | Msa1437680:CDS | 45.0% |
| CCTGTGATTCTCAAATGAGG+AGG | - | tig0028351:43966-43985 | None:intergenic | 45.0% | |
| CCTCCTCATTTGAGAATCAC+AGG | + | tig0028351:43963-43982 | Msa1437680:CDS | 45.0% | |
| AGGGATTCATCAGCAGAAAG+AGG | + | tig0028351:43983-44002 | Msa1437680:CDS | 45.0% | |
| ! | GTTACATTCCCTTTTGGCCT+TGG | + | tig0028351:44160-44179 | Msa1437680:CDS | 45.0% |
| GATGATGTTGAATCGGGACT+TGG | - | tig0028351:44326-44345 | None:intergenic | 45.0% | |
| AGTCATGGTTGTAACCGAAC+AGG | + | tig0028351:44421-44440 | Msa1437680:CDS | 45.0% | |
| GTTGTGATTCGAGTCCTGTT+CGG | - | tig0028351:44438-44457 | None:intergenic | 45.0% | |
| GAACAGGACTCGAATCACAA+CGG | + | tig0028351:44437-44456 | Msa1437680:CDS | 45.0% | |
| ACGGTTCAACATTGATGGAG+AGG | + | tig0028351:44456-44475 | Msa1437680:CDS | 45.0% | |
| ! | TGAGAAGATGCTGTTTGGTG+AGG | + | tig0028351:44565-44584 | Msa1437680:CDS | 45.0% |
| ATGGTATGTTGCAGGCAAGA+AGG | + | tig0028351:44705-44724 | Msa1437680:CDS | 45.0% | |
| TCACAGCTTGCAACTCCTGA+TGG | + | tig0028351:43636-43655 | Msa1437680:CDS | 50.0% | |
| CTCTGCATAGTGTCTCCATC+AGG | - | tig0028351:43654-43673 | None:intergenic | 50.0% | |
| ATGCTGCTGAACCTGCACAA+TGG | + | tig0028351:43901-43920 | Msa1437680:CDS | 50.0% | |
| CTCAAATGAGGAGGACCTTC+AGG | - | tig0028351:43957-43976 | None:intergenic | 50.0% | |
| CAACAACAGCTTGGAGAGCT+AGG | + | tig0028351:44816-44835 | Msa1437680:CDS | 50.0% | |
| TCACAGCTTGCAACTCCTGA+TGG | + | tig0028351:43636-43655 | Msa1437680:CDS | 50.0% | |
| CTCTGCATAGTGTCTCCATC+AGG | - | tig0028351:43654-43673 | None:intergenic | 50.0% | |
| ATGCTGCTGAACCTGCACAA+TGG | + | tig0028351:43901-43920 | Msa1437680:CDS | 50.0% | |
| CTCAAATGAGGAGGACCTTC+AGG | - | tig0028351:43957-43976 | None:intergenic | 50.0% | |
| CAACAACAGCTTGGAGAGCT+AGG | + | tig0028351:44816-44835 | Msa1437680:CDS | 50.0% | |
| ACTTCGTGTGAAAACCGGCG+AGG | + | tig0028351:44112-44131 | Msa1437680:CDS | 55.0% | |
| ACTAATTGCAAGCGCCTCGC+CGG | - | tig0028351:44129-44148 | None:intergenic | 55.0% | |
| ACTTCGTGTGAAAACCGGCG+AGG | + | tig0028351:44112-44131 | Msa1437680:CDS | 55.0% | |
| ACTAATTGCAAGCGCCTCGC+CGG | - | tig0028351:44129-44148 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028351 | gene | 43399 | 44844 | 43399 | ID=Msa1437680;Name=Msa1437680 |
| tig0028351 | mRNA | 43399 | 44844 | 43399 | ID=Msa1437680-mRNA-1;Parent=Msa1437680;Name=Msa1437680-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|481 |
| tig0028351 | exon | 43399 | 44844 | 43399 | ID=Msa1437680-mRNA-1:exon:10809;Parent=Msa1437680-mRNA-1 |
| tig0028351 | CDS | 43399 | 44844 | 43399 | ID=Msa1437680-mRNA-1:cds;Parent=Msa1437680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
