Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749930 | sp|Q9LPR8|SCL3_ARATH | 65.914 | 487 | 155 | 7 | 1 | 481 | 1 | 482 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749930 | G7K9A5 | 99.168 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 0.0 | 988 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0749930 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001790 | Msa0749930 | 0.817722 | 2.845869e-52 | -8.615850e-47 |
| Msa0012040 | Msa0749930 | 0.801720 | 7.881528e-49 | -8.615850e-47 |
| Msa0036140 | Msa0749930 | 0.840418 | 8.799488e-58 | -8.615850e-47 |
| Msa0048000 | Msa0749930 | 0.803511 | 3.366540e-49 | -8.615850e-47 |
| Msa0077450 | Msa0749930 | 0.801550 | 8.540550e-49 | -8.615850e-47 |
| Msa0084080 | Msa0749930 | 0.823072 | 1.686292e-53 | -8.615850e-47 |
| Msa0089360 | Msa0749930 | 0.818920 | 1.523669e-52 | -8.615850e-47 |
| Msa0099650 | Msa0749930 | 0.808552 | 2.928825e-50 | -8.615850e-47 |
| Msa0102120 | Msa0749930 | 0.809657 | 1.697630e-50 | -8.615850e-47 |
| Msa0120340 | Msa0749930 | 0.806808 | 6.871040e-50 | -8.615850e-47 |
| Msa0607540 | Msa0749930 | 0.830018 | 3.719420e-55 | -8.615850e-47 |
| Msa0610430 | Msa0749930 | 0.800164 | 1.638426e-48 | -8.615850e-47 |
| Msa0610590 | Msa0749930 | 0.805901 | 1.067198e-49 | -8.615850e-47 |
| Msa0610890 | Msa0749930 | 0.822620 | 2.149060e-53 | -8.615850e-47 |
| Msa0615310 | Msa0749930 | 0.811226 | 7.783893e-51 | -8.615850e-47 |
| Msa0628740 | Msa0749930 | 0.832602 | 8.607934e-56 | -8.615850e-47 |
| Msa0647830 | Msa0749930 | 0.822200 | 2.689884e-53 | -8.615850e-47 |
| Msa0647980 | Msa0749930 | 0.811076 | 8.389759e-51 | -8.615850e-47 |
| Msa0651270 | Msa0749930 | 0.832196 | 1.084839e-55 | -8.615850e-47 |
| Msa0653490 | Msa0749930 | 0.801828 | 7.489733e-49 | -8.615850e-47 |
| Msa0654720 | Msa0749930 | 0.809796 | 1.584999e-50 | -8.615850e-47 |
| Msa0657970 | Msa0749930 | 0.800589 | 1.342509e-48 | -8.615850e-47 |
| Msa0666140 | Msa0749930 | 0.825312 | 5.021906e-54 | -8.615850e-47 |
| Msa0667890 | Msa0749930 | 0.820690 | 6.003291e-53 | -8.615850e-47 |
| Msa0678820 | Msa0749930 | 0.805970 | 1.032370e-49 | -8.615850e-47 |
| Msa0688070 | Msa0749930 | 0.825312 | 5.020332e-54 | -8.615850e-47 |
| Msa0688670 | Msa0749930 | 0.833295 | 5.788624e-56 | -8.615850e-47 |
| Msa0690440 | Msa0749930 | 0.824531 | 7.672911e-54 | -8.615850e-47 |
| Msa0692230 | Msa0749930 | 0.833685 | 4.627031e-56 | -8.615850e-47 |
| Msa0693600 | Msa0749930 | 0.807367 | 5.234049e-50 | -8.615850e-47 |
| Msa0698360 | Msa0749930 | 0.823326 | 1.471304e-53 | -8.615850e-47 |
| Msa0712080 | Msa0749930 | 0.956620 | 1.919843e-114 | -8.615850e-47 |
| Msa0731180 | Msa0749930 | 0.808673 | 2.759630e-50 | -8.615850e-47 |
| Msa0740510 | Msa0749930 | 0.811262 | 7.646406e-51 | -8.615850e-47 |
| Msa0749930 | Msa0757080 | 0.804302 | 2.306131e-49 | -8.615850e-47 |
| Msa0749930 | Msa0761910 | 0.807843 | 4.145893e-50 | -8.615850e-47 |
| Msa0749930 | Msa0778520 | 0.819808 | 9.563779e-53 | -8.615850e-47 |
| Msa0749930 | Msa0790510 | 0.814885 | 1.226920e-51 | -8.615850e-47 |
| Msa0749930 | Msa0795080 | 0.811332 | 7.381763e-51 | -8.615850e-47 |
| Msa0749930 | Msa0798860 | 0.831187 | 1.924728e-55 | -8.615850e-47 |
| Msa0749930 | Msa0803590 | 0.827699 | 1.354369e-54 | -8.615850e-47 |
| Msa0749930 | Msa0816590 | 0.801661 | 8.102607e-49 | -8.615850e-47 |
| Msa0749930 | Msa0820770 | 0.819384 | 1.194639e-52 | -8.615850e-47 |
| Msa0749930 | Msa0830420 | 0.990566 | 3.025337e-183 | -8.615850e-47 |
| Msa0749930 | Msa0830530 | 0.805197 | 1.499720e-49 | -8.615850e-47 |
| Msa0749930 | Msa0835730 | 0.800895 | 1.162800e-48 | -8.615850e-47 |
| Msa0749930 | Msa0861090 | 0.813813 | 2.116934e-51 | -8.615850e-47 |
| Msa0749930 | Msa0876850 | -0.823849 | 1.110134e-53 | -8.615850e-47 |
| Msa0749930 | Msa0877410 | 0.806886 | 6.614513e-50 | -8.615850e-47 |
| Msa0749930 | Msa0910000 | 0.824323 | 8.590911e-54 | -8.615850e-47 |
| Msa0749930 | Msa0910980 | -0.801809 | 7.557605e-49 | -8.615850e-47 |
| Msa0749930 | Msa0927670 | 0.815035 | 1.136213e-51 | -8.615850e-47 |
| Msa0749930 | Msa0933230 | 0.816809 | 4.566315e-52 | -8.615850e-47 |
| Msa0749930 | Msa0933310 | 0.819350 | 1.216592e-52 | -8.615850e-47 |
| Msa0749930 | Msa0942080 | -0.805134 | 1.545725e-49 | -8.615850e-47 |
| Msa0749930 | Msa0944550 | 0.824335 | 8.535808e-54 | -8.615850e-47 |
| Msa0749930 | Msa0971090 | 0.811109 | 8.251164e-51 | -8.615850e-47 |
| Msa0749930 | Msa0982240 | 0.836777 | 7.670413e-57 | -8.615850e-47 |
| Msa0749930 | Msa0982270 | 0.823690 | 1.209328e-53 | -8.615850e-47 |
| Msa0749930 | Msa0999040 | 0.807354 | 5.265456e-50 | -8.615850e-47 |
| Msa0749930 | Msa1002480 | 0.862941 | 3.545859e-64 | -8.615850e-47 |
| Msa0749930 | Msa1005410 | 0.806929 | 6.477523e-50 | -8.615850e-47 |
| Msa0749930 | Msa1023920 | 0.832314 | 1.014670e-55 | -8.615850e-47 |
| Msa0749930 | Msa1029210 | 0.820610 | 6.263982e-53 | -8.615850e-47 |
| Msa0749930 | Msa1030970 | 0.801169 | 1.022100e-48 | -8.615850e-47 |
| Msa0749930 | Msa1031770 | 0.806402 | 8.369733e-50 | -8.615850e-47 |
| Msa0749930 | Msa1037700 | -0.804749 | 1.860248e-49 | -8.615850e-47 |
| Msa0749930 | Msa1062920 | 0.812434 | 4.247770e-51 | -8.615850e-47 |
| Msa0749930 | Msa1065610 | 0.812674 | 3.764435e-51 | -8.615850e-47 |
| Msa0749930 | Msa1070840 | 0.800085 | 1.700337e-48 | -8.615850e-47 |
| Msa0749930 | Msa1070850 | 0.818469 | 1.929170e-52 | -8.615850e-47 |
| Msa0749930 | Msa1075080 | -0.812940 | 3.291297e-51 | -8.615850e-47 |
| Msa0749930 | Msa1075220 | -0.805801 | 1.120181e-49 | -8.615850e-47 |
| Msa0749930 | Msa1082500 | 0.813483 | 2.501389e-51 | -8.615850e-47 |
| Msa0749930 | Msa1084260 | 0.816745 | 4.720655e-52 | -8.615850e-47 |
| Msa0749930 | Msa1090260 | 0.800032 | 1.743015e-48 | -8.615850e-47 |
| Msa0749930 | Msa1092090 | 0.841402 | 4.855559e-58 | -8.615850e-47 |
| Msa0749930 | Msa1100480 | 0.821453 | 4.005622e-53 | -8.615850e-47 |
| Msa0749930 | Msa1107900 | 0.830528 | 2.791876e-55 | -8.615850e-47 |
| Msa0749930 | Msa1111180 | 0.821435 | 4.043325e-53 | -8.615850e-47 |
| Msa0749930 | Msa1116130 | -0.803698 | 3.078822e-49 | -8.615850e-47 |
| Msa0749930 | Msa1118110 | 0.815487 | 9.017265e-52 | -8.615850e-47 |
| Msa0749930 | Msa1118750 | 0.820161 | 7.939551e-53 | -8.615850e-47 |
| Msa0749930 | Msa1124540 | -0.824076 | 9.818601e-54 | -8.615850e-47 |
| Msa0749930 | Msa1130110 | 0.850221 | 1.953760e-60 | -8.615850e-47 |
| Msa0749930 | Msa1132950 | 0.807828 | 4.176919e-50 | -8.615850e-47 |
| Msa0749930 | Msa1143270 | 0.834584 | 2.754351e-56 | -8.615850e-47 |
| Msa0749930 | Msa1144390 | 0.804399 | 2.200963e-49 | -8.615850e-47 |
| Msa0749930 | Msa1154780 | 0.810738 | 9.930398e-51 | -8.615850e-47 |
| Msa0749930 | Msa1158670 | 0.856736 | 2.629332e-62 | -8.615850e-47 |
| Msa0749930 | Msa1162550 | -0.806344 | 8.608445e-50 | -8.615850e-47 |
| Msa0749930 | Msa1170800 | 0.843675 | 1.211263e-58 | -8.615850e-47 |
| Msa0749930 | Msa1174040 | 0.801069 | 1.071488e-48 | -8.615850e-47 |
| Msa0749930 | Msa1183100 | -0.811149 | 8.089360e-51 | -8.615850e-47 |
| Msa0749930 | Msa1199560 | 0.825415 | 4.745591e-54 | -8.615850e-47 |
| Msa0749930 | Msa1207380 | 0.804670 | 1.932199e-49 | -8.615850e-47 |
| Msa0749930 | Msa1214890 | 0.817081 | 3.968446e-52 | -8.615850e-47 |
| Msa0749930 | Msa1217810 | 0.833436 | 5.337710e-56 | -8.615850e-47 |
| Msa0749930 | Msa1224480 | 0.823781 | 1.151632e-53 | -8.615850e-47 |
| Msa0749930 | Msa1230830 | 0.838670 | 2.505266e-57 | -8.615850e-47 |
| Msa0749930 | Msa1233500 | 0.821276 | 4.400524e-53 | -8.615850e-47 |
| Msa0749930 | Msa1258380 | -0.816190 | 6.283315e-52 | -8.615850e-47 |
| Msa0749930 | Msa1276440 | 0.809619 | 1.730356e-50 | -8.615850e-47 |
| Msa0749930 | Msa1279210 | 0.860711 | 1.707249e-63 | -8.615850e-47 |
| Msa0749930 | Msa1294480 | 0.804952 | 1.687179e-49 | -8.615850e-47 |
| Msa0749930 | Msa1306750 | 0.802075 | 6.664682e-49 | -8.615850e-47 |
| Msa0749930 | Msa1307740 | 0.814196 | 1.742193e-51 | -8.615850e-47 |
| Msa0749930 | Msa1314340 | 0.840450 | 8.634048e-58 | -8.615850e-47 |
| Msa0749930 | Msa1318990 | 0.834055 | 3.738858e-56 | -8.615850e-47 |
| Msa0749930 | Msa1322190 | 0.813928 | 1.997026e-51 | -8.615850e-47 |
| Msa0749930 | Msa1327550 | 0.804642 | 1.958444e-49 | -8.615850e-47 |
| Msa0749930 | Msa1328700 | 0.833297 | 5.783048e-56 | -8.615850e-47 |
| Msa0749930 | Msa1331910 | 0.808370 | 3.202807e-50 | -8.615850e-47 |
| Msa0749930 | Msa1340650 | 0.833698 | 4.592620e-56 | -8.615850e-47 |
| Msa0749930 | Msa1359040 | 0.806641 | 7.453977e-50 | -8.615850e-47 |
| Msa0749930 | Msa1378230 | 0.836534 | 8.846483e-57 | -8.615850e-47 |
| Msa0749930 | Msa1379850 | 0.808569 | 2.904444e-50 | -8.615850e-47 |
| Msa0749930 | Msa1382930 | 0.853583 | 2.170676e-61 | -8.615850e-47 |
| Msa0749930 | Msa1384350 | 0.848870 | 4.652454e-60 | -8.615850e-47 |
| Msa0749930 | Msa1390050 | 0.812270 | 4.613491e-51 | -8.615850e-47 |
| Msa0749930 | Msa1392260 | 0.837684 | 4.494068e-57 | -8.615850e-47 |
| Msa0749930 | Msa1393040 | 0.807116 | 5.913329e-50 | -8.615850e-47 |
| Msa0749930 | Msa1398890 | 0.803172 | 3.956637e-49 | -8.615850e-47 |
| Msa0749930 | Msa1417200 | 0.812198 | 4.783245e-51 | -8.615850e-47 |
| Msa0749930 | Msa1420140 | 0.808910 | 2.455557e-50 | -8.615850e-47 |
| Msa0749930 | Msa1424450 | 0.812937 | 3.296324e-51 | -8.615850e-47 |
| Msa0749930 | Msa1425010 | 0.801781 | 7.656903e-49 | -8.615850e-47 |
| Msa0749930 | Msa1425100 | 0.803750 | 3.003290e-49 | -8.615850e-47 |
| Msa0749930 | Msa1429900 | 0.843024 | 1.806546e-58 | -8.615850e-47 |
| Msa0749930 | Msa1437680 | 0.996288 | 1.186453e-225 | -8.615850e-47 |
| Msa0749930 | Msa1438910 | 0.843672 | 1.213020e-58 | -8.615850e-47 |
| Msa0749930 | Msa1444250 | -0.811605 | 6.438529e-51 | -8.615850e-47 |
| Msa0749930 | Msa1444740 | 0.801347 | 9.400756e-49 | -8.615850e-47 |
| Msa0749930 | Msa1447150 | 0.825214 | 5.296236e-54 | -8.615850e-47 |
| Msa0749930 | Msa1451620 | -0.828834 | 7.210491e-55 | -8.615850e-47 |
| Msa0749930 | Msa1454120 | 0.822416 | 2.396856e-53 | -8.615850e-47 |
| Msa0749930 | Msa1454860 | 0.846631 | 1.923344e-59 | -8.615850e-47 |
| Msa0749930 | Msa1464940 | 0.820049 | 8.421503e-53 | -8.615850e-47 |
| Msa0749930 | Msa1466730 | 0.820080 | 8.287225e-53 | -8.615850e-47 |
| Msa0122590 | Msa0749930 | 0.818172 | 2.251211e-52 | -8.615850e-47 |
| Msa0159770 | Msa0749930 | 0.819413 | 1.176650e-52 | -8.615850e-47 |
| Msa0166870 | Msa0749930 | 0.836242 | 1.049801e-56 | -8.615850e-47 |
| Msa0170140 | Msa0749930 | 0.826839 | 2.176801e-54 | -8.615850e-47 |
| Msa0188630 | Msa0749930 | 0.815982 | 6.994374e-52 | -8.615850e-47 |
| Msa0188830 | Msa0749930 | 0.832304 | 1.020149e-55 | -8.615850e-47 |
| Msa0206010 | Msa0749930 | 0.812236 | 4.693290e-51 | -8.615850e-47 |
| Msa0210450 | Msa0749930 | 0.804040 | 2.614809e-49 | -8.615850e-47 |
| Msa0220440 | Msa0749930 | 0.832132 | 1.125406e-55 | -8.615850e-47 |
| Msa0222340 | Msa0749930 | 0.826261 | 2.990033e-54 | -8.615850e-47 |
| Msa0226890 | Msa0749930 | 0.801473 | 8.858544e-49 | -8.615850e-47 |
| Msa0376590 | Msa0749930 | 0.839804 | 1.272844e-57 | -8.615850e-47 |
| Msa0379640 | Msa0749930 | 0.846119 | 2.652460e-59 | -8.615850e-47 |
| Msa0389340 | Msa0749930 | 0.837731 | 4.371690e-57 | -8.615850e-47 |
| Msa0389810 | Msa0749930 | 0.811905 | 5.540009e-51 | -8.615850e-47 |
| Msa0409080 | Msa0749930 | 0.806607 | 7.576412e-50 | -8.615850e-47 |
| Msa0426900 | Msa0749930 | 0.818548 | 1.850795e-52 | -8.615850e-47 |
| Msa0428930 | Msa0749930 | 0.848839 | 4.744614e-60 | -8.615850e-47 |
| Msa0436370 | Msa0749930 | 0.809108 | 2.227272e-50 | -8.615850e-47 |
| Msa0442200 | Msa0749930 | 0.802025 | 6.821478e-49 | -8.615850e-47 |
| Msa0453350 | Msa0749930 | 0.807577 | 4.723210e-50 | -8.615850e-47 |
| Msa0464900 | Msa0749930 | 0.813412 | 2.594102e-51 | -8.615850e-47 |
| Msa0465670 | Msa0749930 | -0.805755 | 1.145369e-49 | -8.615850e-47 |
| Msa0466390 | Msa0749930 | 0.800746 | 1.246946e-48 | -8.615850e-47 |
| Msa0467930 | Msa0749930 | 0.800367 | 1.489808e-48 | -8.615850e-47 |
| Msa0468130 | Msa0749930 | 0.811742 | 6.012217e-51 | -8.615850e-47 |
| Msa0475490 | Msa0749930 | 0.835840 | 1.327640e-56 | -8.615850e-47 |
| Msa0477130 | Msa0749930 | -0.835357 | 1.758527e-56 | -8.615850e-47 |
| Msa0479970 | Msa0749930 | 0.817183 | 3.764322e-52 | -8.615850e-47 |
| Msa0482190 | Msa0749930 | -0.816886 | 4.388587e-52 | -8.615850e-47 |
| Msa0243710 | Msa0749930 | 0.806637 | 7.469406e-50 | -8.615850e-47 |
| Msa0243720 | Msa0749930 | 0.806495 | 8.001817e-50 | -8.615850e-47 |
| Msa0245940 | Msa0749930 | 0.813046 | 3.120136e-51 | -8.615850e-47 |
| Msa0250410 | Msa0749930 | 0.803203 | 3.899576e-49 | -8.615850e-47 |
| Msa0261720 | Msa0749930 | 0.802190 | 6.310612e-49 | -8.615850e-47 |
| Msa0263840 | Msa0749930 | 0.807756 | 4.327626e-50 | -8.615850e-47 |
| Msa0270100 | Msa0749930 | 0.810549 | 1.090611e-50 | -8.615850e-47 |
| Msa0270270 | Msa0749930 | 0.819712 | 1.005515e-52 | -8.615850e-47 |
| Msa0275690 | Msa0749930 | 0.806185 | 9.299336e-50 | -8.615850e-47 |
| Msa0282250 | Msa0749930 | 0.826368 | 2.818612e-54 | -8.615850e-47 |
| Msa0284520 | Msa0749930 | 0.810396 | 1.177206e-50 | -8.615850e-47 |
| Msa0287410 | Msa0749930 | 0.832694 | 8.166765e-56 | -8.615850e-47 |
| Msa0287650 | Msa0749930 | 0.806071 | 9.829943e-50 | -8.615850e-47 |
| Msa0299580 | Msa0749930 | 0.828837 | 7.198716e-55 | -8.615850e-47 |
| Msa0301680 | Msa0749930 | 0.807603 | 4.662533e-50 | -8.615850e-47 |
| Msa0319170 | Msa0749930 | 0.803449 | 3.467870e-49 | -8.615850e-47 |
| Msa0323180 | Msa0749930 | 0.802707 | 4.937782e-49 | -8.615850e-47 |
| Msa0326110 | Msa0749930 | 0.821394 | 4.132259e-53 | -8.615850e-47 |
| Msa0344530 | Msa0749930 | 0.802485 | 5.487569e-49 | -8.615850e-47 |
| Msa0351810 | Msa0749930 | 0.810740 | 9.917385e-51 | -8.615850e-47 |
| Msa0484780 | Msa0749930 | 0.815058 | 1.123093e-51 | -8.615850e-47 |
| Msa0485500 | Msa0749930 | -0.809186 | 2.142432e-50 | -8.615850e-47 |
| Msa0489030 | Msa0749930 | 0.813455 | 2.537345e-51 | -8.615850e-47 |
| Msa0489100 | Msa0749930 | 0.811521 | 6.717084e-51 | -8.615850e-47 |
| Msa0493630 | Msa0749930 | 0.805579 | 1.247278e-49 | -8.615850e-47 |
| Msa0501450 | Msa0749930 | 0.815728 | 7.965566e-52 | -8.615850e-47 |
| Msa0502100 | Msa0749930 | 0.822283 | 2.573333e-53 | -8.615850e-47 |
| Msa0516370 | Msa0749930 | 0.824530 | 7.679522e-54 | -8.615850e-47 |
| Msa0521430 | Msa0749930 | 0.801474 | 8.853281e-49 | -8.615850e-47 |
| Msa0532710 | Msa0749930 | 0.800922 | 1.148084e-48 | -8.615850e-47 |
| Msa0536220 | Msa0749930 | 0.815753 | 7.864361e-52 | -8.615850e-47 |
| Msa0553460 | Msa0749930 | 0.819201 | 1.315275e-52 | -8.615850e-47 |
| Msa0561230 | Msa0749930 | 0.822488 | 2.305855e-53 | -8.615850e-47 |
| Msa0572480 | Msa0749930 | 0.803765 | 2.982133e-49 | -8.615850e-47 |
| Msa0575470 | Msa0749930 | 0.810073 | 1.381601e-50 | -8.615850e-47 |
| Msa0578970 | Msa0749930 | 0.803837 | 2.881493e-49 | -8.615850e-47 |
| Msa0579130 | Msa0749930 | 0.836541 | 8.811687e-57 | -8.615850e-47 |
| Msa0579200 | Msa0749930 | 0.806113 | 9.632430e-50 | -8.615850e-47 |
| Msa0599580 | Msa0749930 | 0.818881 | 1.555120e-52 | -8.615850e-47 |
| Msa0599890 | Msa0749930 | 0.816024 | 6.842615e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749930 | MtrunA17_Chr5g0396491 | 99.168 | 481 | 4 | 0 | 1 | 481 | 1 | 481 | 0.0 | 988 |
| Msa0749930 | MtrunA17_Chr4g0038851 | 75.783 | 479 | 108 | 6 | 4 | 481 | 1 | 472 | 0.0 | 741 |
| Msa0749930 | MtrunA17_Chr3g0085681 | 54.139 | 447 | 193 | 5 | 34 | 480 | 4 | 438 | 4.38e-170 | 486 |
| Msa0749930 | MtrunA17_Chr3g0085361 | 55.056 | 356 | 148 | 5 | 125 | 480 | 9 | 352 | 5.06e-134 | 391 |
| Msa0749930 | MtrunA17_Chr7g0224271 | 34.658 | 453 | 209 | 7 | 45 | 478 | 289 | 673 | 4.84e-83 | 270 |
| Msa0749930 | MtrunA17_Chr8g0357601 | 30.682 | 440 | 235 | 10 | 49 | 479 | 175 | 553 | 3.18e-60 | 207 |
| Msa0749930 | MtrunA17_Chr5g0447691 | 30.254 | 433 | 233 | 8 | 53 | 478 | 174 | 544 | 1.82e-59 | 204 |
| Msa0749930 | MtrunA17_Chr4g0057291 | 27.790 | 439 | 245 | 8 | 49 | 477 | 285 | 661 | 2.10e-56 | 199 |
| Msa0749930 | MtrunA17_Chr1g0159461 | 28.605 | 430 | 240 | 7 | 55 | 478 | 224 | 592 | 7.84e-54 | 190 |
| Msa0749930 | MtrunA17_Chr3g0125811 | 28.302 | 424 | 249 | 6 | 55 | 478 | 202 | 570 | 4.35e-52 | 185 |
| Msa0749930 | MtrunA17_Chr4g0031721 | 28.009 | 432 | 237 | 7 | 56 | 477 | 316 | 683 | 6.33e-47 | 172 |
| Msa0749930 | MtrunA17_Chr4g0031701 | 25.959 | 443 | 260 | 6 | 42 | 475 | 240 | 623 | 5.68e-46 | 169 |
| Msa0749930 | MtrunA17_Chr4g0031711 | 27.189 | 434 | 248 | 7 | 53 | 477 | 358 | 732 | 9.28e-46 | 170 |
| Msa0749930 | MtrunA17_Chr4g0057891 | 28.409 | 440 | 244 | 13 | 50 | 479 | 143 | 521 | 1.18e-45 | 166 |
| Msa0749930 | MtrunA17_Chr4g0031741 | 26.620 | 432 | 247 | 7 | 53 | 477 | 281 | 649 | 2.48e-45 | 167 |
| Msa0749930 | MtrunA17_Chr1g0207361 | 91.089 | 101 | 9 | 0 | 282 | 382 | 64 | 164 | 3.65e-44 | 152 |
| Msa0749930 | MtrunA17_Chr1g0207361 | 90.741 | 54 | 5 | 0 | 90 | 143 | 1 | 54 | 2.49e-27 | 107 |
| Msa0749930 | MtrunA17_Chr4g0031731 | 25.734 | 443 | 261 | 7 | 42 | 475 | 240 | 623 | 2.89e-43 | 161 |
| Msa0749930 | MtrunA17_Chr1g0183641 | 29.062 | 437 | 234 | 12 | 48 | 480 | 115 | 479 | 8.06e-43 | 158 |
| Msa0749930 | MtrunA17_Chr2g0328341 | 26.531 | 441 | 258 | 9 | 42 | 477 | 258 | 637 | 1.95e-42 | 159 |
| Msa0749930 | MtrunA17_Chr4g0076091 | 26.512 | 430 | 246 | 10 | 56 | 477 | 175 | 542 | 2.73e-42 | 157 |
| Msa0749930 | MtrunA17_Chr7g0238891 | 27.021 | 433 | 242 | 8 | 56 | 478 | 372 | 740 | 3.42e-42 | 159 |
| Msa0749930 | MtrunA17_Chr2g0328381 | 25.792 | 442 | 262 | 9 | 41 | 477 | 260 | 640 | 2.93e-41 | 156 |
| Msa0749930 | MtrunA17_Chr7g0245601 | 41.146 | 192 | 108 | 2 | 60 | 249 | 442 | 630 | 2.22e-39 | 152 |
| Msa0749930 | MtrunA17_Chr7g0245601 | 38.255 | 149 | 87 | 3 | 333 | 478 | 646 | 792 | 2.45e-23 | 103 |
| Msa0749930 | MtrunA17_Chr2g0294471 | 26.840 | 462 | 257 | 11 | 33 | 478 | 180 | 576 | 2.75e-37 | 144 |
| Msa0749930 | MtrunA17_Chr3g0110971 | 34.685 | 222 | 131 | 3 | 44 | 260 | 207 | 419 | 2.01e-36 | 142 |
| Msa0749930 | MtrunA17_Chr3g0110971 | 37.805 | 164 | 89 | 3 | 328 | 478 | 424 | 587 | 7.25e-30 | 122 |
| Msa0749930 | MtrunA17_Chr2g0306641 | 34.498 | 229 | 132 | 5 | 47 | 266 | 116 | 335 | 6.01e-34 | 134 |
| Msa0749930 | MtrunA17_Chr2g0306641 | 37.423 | 163 | 97 | 2 | 318 | 479 | 330 | 488 | 1.69e-25 | 109 |
| Msa0749930 | MtrunA17_Chr8g0376381 | 34.375 | 224 | 128 | 5 | 44 | 260 | 157 | 368 | 1.48e-33 | 133 |
| Msa0749930 | MtrunA17_Chr8g0376381 | 35.526 | 152 | 95 | 2 | 328 | 478 | 373 | 522 | 9.53e-29 | 119 |
| Msa0749930 | MtrunA17_Chr2g0328401 | 28.457 | 376 | 212 | 9 | 56 | 431 | 290 | 608 | 2.48e-33 | 133 |
| Msa0749930 | MtrunA17_Chr2g0319091 | 35.238 | 210 | 129 | 2 | 53 | 256 | 209 | 417 | 9.25e-32 | 128 |
| Msa0749930 | MtrunA17_Chr2g0319091 | 41.611 | 149 | 86 | 1 | 329 | 477 | 431 | 578 | 2.35e-29 | 121 |
| Msa0749930 | MtrunA17_Chr5g0424131 | 26.096 | 456 | 255 | 11 | 41 | 477 | 106 | 498 | 1.75e-31 | 126 |
| Msa0749930 | MtrunA17_Chr4g0039661 | 25.688 | 436 | 244 | 12 | 53 | 478 | 190 | 555 | 2.67e-29 | 120 |
| Msa0749930 | MtrunA17_Chr5g0445331 | 28.972 | 214 | 144 | 3 | 53 | 258 | 158 | 371 | 2.80e-29 | 120 |
| Msa0749930 | MtrunA17_Chr5g0445331 | 36.879 | 141 | 88 | 1 | 338 | 478 | 393 | 532 | 5.98e-24 | 104 |
| Msa0749930 | MtrunA17_Chr4g0038761 | 28.839 | 267 | 168 | 4 | 60 | 304 | 88 | 354 | 5.08e-29 | 119 |
| Msa0749930 | MtrunA17_Chr4g0038761 | 39.456 | 147 | 87 | 2 | 332 | 478 | 298 | 442 | 3.19e-21 | 96.3 |
| Msa0749930 | MtrunA17_Chr2g0328371 | 25.597 | 293 | 156 | 6 | 139 | 428 | 13 | 246 | 3.33e-28 | 112 |
| Msa0749930 | MtrunA17_Chr2g0328361 | 23.409 | 440 | 248 | 10 | 42 | 477 | 260 | 614 | 1.08e-27 | 116 |
| Msa0749930 | MtrunA17_Chr2g0290241 | 27.178 | 287 | 189 | 7 | 57 | 329 | 58 | 338 | 5.11e-27 | 112 |
| Msa0749930 | MtrunA17_Chr2g0290241 | 34.507 | 142 | 92 | 1 | 338 | 479 | 286 | 426 | 3.43e-21 | 95.9 |
| Msa0749930 | MtrunA17_Chr2g0328391 | 29.048 | 210 | 142 | 2 | 56 | 258 | 299 | 508 | 1.63e-26 | 113 |
| Msa0749930 | MtrunA17_Chr2g0328391 | 28.188 | 149 | 107 | 0 | 329 | 477 | 520 | 668 | 1.98e-18 | 88.6 |
| Msa0749930 | MtrunA17_Chr3g0101141 | 28.302 | 212 | 145 | 2 | 53 | 258 | 172 | 382 | 2.30e-26 | 112 |
| Msa0749930 | MtrunA17_Chr3g0101141 | 36.170 | 141 | 89 | 1 | 338 | 478 | 403 | 542 | 2.54e-25 | 108 |
| Msa0749930 | MtrunA17_Chr1g0194621 | 26.134 | 463 | 254 | 18 | 36 | 478 | 124 | 518 | 4.42e-26 | 111 |
| Msa0749930 | MtrunA17_Chr7g0270031 | 25.877 | 456 | 256 | 13 | 36 | 478 | 168 | 554 | 1.48e-25 | 109 |
| Msa0749930 | MtrunA17_Chr5g0401421 | 24.658 | 438 | 287 | 11 | 56 | 477 | 35 | 445 | 1.53e-25 | 108 |
| Msa0749930 | MtrunA17_Chr4g0053901 | 23.729 | 472 | 285 | 12 | 38 | 477 | 39 | 467 | 2.06e-25 | 108 |
| Msa0749930 | MtrunA17_Chr2g0328411 | 31.100 | 209 | 134 | 2 | 56 | 258 | 289 | 493 | 5.58e-25 | 108 |
| Msa0749930 | MtrunA17_Chr2g0328411 | 30.201 | 149 | 104 | 0 | 329 | 477 | 505 | 653 | 9.51e-18 | 86.3 |
| Msa0749930 | MtrunA17_Chr2g0328431 | 31.100 | 209 | 134 | 2 | 56 | 258 | 289 | 493 | 1.29e-24 | 107 |
| Msa0749930 | MtrunA17_Chr2g0328431 | 29.530 | 149 | 105 | 0 | 329 | 477 | 505 | 653 | 1.87e-16 | 82.4 |
| Msa0749930 | MtrunA17_Chr7g0236851 | 27.586 | 348 | 176 | 10 | 141 | 477 | 374 | 656 | 6.52e-24 | 105 |
| Msa0749930 | MtrunA17_Chr5g0401131 | 29.493 | 217 | 145 | 3 | 50 | 258 | 108 | 324 | 8.92e-24 | 103 |
| Msa0749930 | MtrunA17_Chr5g0401131 | 29.032 | 155 | 103 | 4 | 329 | 478 | 338 | 490 | 3.78e-11 | 65.1 |
| Msa0749930 | MtrunA17_Chr2g0294461 | 34.615 | 156 | 93 | 4 | 328 | 478 | 434 | 585 | 2.98e-22 | 100 |
| Msa0749930 | MtrunA17_Chr2g0294461 | 29.032 | 248 | 160 | 6 | 33 | 264 | 186 | 433 | 2.71e-20 | 94.0 |
| Msa0749930 | MtrunA17_Chr2g0329591 | 26.512 | 215 | 148 | 4 | 47 | 252 | 65 | 278 | 1.14e-20 | 94.4 |
| Msa0749930 | MtrunA17_Chr1g0200401 | 28.205 | 273 | 158 | 9 | 47 | 288 | 71 | 336 | 2.19e-20 | 93.6 |
| Msa0749930 | MtrunA17_Chr1g0200401 | 29.143 | 175 | 106 | 4 | 323 | 479 | 286 | 460 | 5.71e-19 | 89.4 |
| Msa0749930 | MtrunA17_Chr4g0012071 | 22.897 | 428 | 253 | 11 | 57 | 479 | 197 | 552 | 6.48e-20 | 92.8 |
| Msa0749930 | MtrunA17_Chr6g0468561 | 23.570 | 437 | 249 | 12 | 57 | 478 | 296 | 662 | 1.13e-19 | 92.4 |
| Msa0749930 | MtrunA17_Chr3g0114841 | 28.163 | 245 | 136 | 8 | 41 | 255 | 105 | 339 | 2.16e-18 | 87.8 |
| Msa0749930 | MtrunA17_Chr3g0114841 | 31.707 | 164 | 98 | 5 | 321 | 477 | 343 | 499 | 8.02e-14 | 73.6 |
| Msa0749930 | MtrunA17_Chr8g0383981 | 27.536 | 207 | 136 | 8 | 53 | 254 | 136 | 333 | 4.27e-14 | 74.3 |
| Msa0749930 | MtrunA17_Chr3g0087711 | 52.542 | 59 | 28 | 0 | 207 | 265 | 1 | 59 | 8.50e-14 | 65.9 |
| Msa0749930 | MtrunA17_Chr2g0323111 | 26.846 | 149 | 107 | 2 | 329 | 477 | 159 | 305 | 1.05e-13 | 72.0 |
| Msa0749930 | MtrunA17_Chr7g0230731 | 28.205 | 195 | 134 | 2 | 33 | 223 | 349 | 541 | 3.28e-13 | 72.0 |
| Msa0749930 | MtrunA17_Chr7g0230771 | 30.303 | 165 | 113 | 1 | 33 | 197 | 352 | 514 | 5.05e-13 | 71.6 |
| Msa0749930 | MtrunA17_Chr8g0344101 | 23.409 | 440 | 245 | 16 | 50 | 466 | 217 | 587 | 8.53e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749930 | AT1G50420.1 | 65.914 | 487 | 155 | 7 | 1 | 481 | 1 | 482 | 0.0 | 650 |
| Msa0749930 | AT3G54220.1 | 33.484 | 442 | 217 | 10 | 45 | 480 | 282 | 652 | 2.99e-62 | 214 |
| Msa0749930 | AT1G50600.3 | 29.476 | 458 | 251 | 10 | 31 | 478 | 131 | 526 | 5.67e-55 | 192 |
| Msa0749930 | AT1G50600.2 | 29.476 | 458 | 251 | 10 | 31 | 478 | 206 | 601 | 1.76e-54 | 192 |
| Msa0749930 | AT1G50600.1 | 29.476 | 458 | 251 | 10 | 31 | 478 | 202 | 597 | 1.94e-54 | 192 |
| Msa0749930 | AT1G21450.1 | 29.002 | 431 | 238 | 5 | 55 | 478 | 224 | 593 | 4.71e-54 | 191 |
| Msa0749930 | AT4G17230.1 | 26.174 | 447 | 261 | 7 | 39 | 478 | 141 | 525 | 2.78e-46 | 169 |
| Msa0749930 | AT4G17230.2 | 26.174 | 447 | 261 | 7 | 39 | 478 | 141 | 525 | 2.78e-46 | 169 |
| Msa0749930 | AT1G07520.2 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 9.31e-44 | 162 |
| Msa0749930 | AT1G07520.4 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 9.31e-44 | 162 |
| Msa0749930 | AT1G07520.3 | 24.099 | 444 | 268 | 6 | 45 | 477 | 308 | 693 | 4.55e-43 | 162 |
| Msa0749930 | AT1G07520.1 | 24.099 | 444 | 268 | 6 | 45 | 477 | 307 | 692 | 4.56e-43 | 162 |
| Msa0749930 | AT3G46600.2 | 26.097 | 433 | 253 | 6 | 55 | 481 | 3 | 374 | 3.82e-41 | 151 |
| Msa0749930 | AT3G46600.3 | 26.097 | 433 | 253 | 6 | 55 | 481 | 179 | 550 | 4.68e-40 | 152 |
| Msa0749930 | AT3G46600.1 | 26.097 | 433 | 253 | 6 | 55 | 481 | 211 | 582 | 8.58e-40 | 151 |
| Msa0749930 | AT2G29065.1 | 25.513 | 439 | 247 | 10 | 56 | 477 | 252 | 627 | 7.63e-39 | 149 |
| Msa0749930 | AT1G55580.1 | 26.271 | 472 | 237 | 11 | 52 | 478 | 40 | 445 | 7.27e-38 | 144 |
| Msa0749930 | AT1G66350.1 | 35.616 | 219 | 132 | 4 | 44 | 260 | 143 | 354 | 3.05e-36 | 140 |
| Msa0749930 | AT1G66350.1 | 37.179 | 156 | 93 | 2 | 327 | 481 | 358 | 509 | 4.64e-31 | 125 |
| Msa0749930 | AT1G14920.1 | 33.333 | 273 | 147 | 7 | 44 | 288 | 160 | 425 | 9.48e-35 | 137 |
| Msa0749930 | AT1G14920.1 | 34.868 | 152 | 95 | 2 | 328 | 478 | 381 | 529 | 9.23e-27 | 113 |
| Msa0749930 | AT2G01570.1 | 35.683 | 227 | 126 | 5 | 44 | 260 | 212 | 428 | 1.87e-34 | 136 |
| Msa0749930 | AT2G01570.1 | 37.500 | 152 | 91 | 3 | 328 | 478 | 433 | 581 | 5.15e-27 | 114 |
| Msa0749930 | AT5G17490.1 | 34.404 | 218 | 132 | 4 | 47 | 260 | 151 | 361 | 2.46e-34 | 135 |
| Msa0749930 | AT5G17490.1 | 38.562 | 153 | 92 | 2 | 327 | 478 | 365 | 516 | 2.06e-27 | 115 |
| Msa0749930 | AT2G29060.2 | 24.485 | 437 | 249 | 11 | 56 | 477 | 284 | 654 | 8.29e-34 | 135 |
| Msa0749930 | AT2G29060.1 | 24.485 | 437 | 249 | 11 | 56 | 477 | 321 | 691 | 8.52e-34 | 135 |
| Msa0749930 | AT5G48150.1 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.78e-33 | 132 |
| Msa0749930 | AT5G48150.1 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.02e-26 | 113 |
| Msa0749930 | AT5G48150.4 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.78e-33 | 132 |
| Msa0749930 | AT5G48150.4 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.02e-26 | 113 |
| Msa0749930 | AT5G48150.2 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.78e-33 | 132 |
| Msa0749930 | AT5G48150.2 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.02e-26 | 113 |
| Msa0749930 | AT5G48150.3 | 28.622 | 283 | 190 | 4 | 57 | 329 | 123 | 403 | 2.78e-33 | 132 |
| Msa0749930 | AT5G48150.3 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 1.02e-26 | 113 |
| Msa0749930 | AT5G59450.1 | 26.376 | 436 | 250 | 12 | 53 | 478 | 224 | 598 | 5.03e-33 | 132 |
| Msa0749930 | AT3G03450.1 | 32.287 | 223 | 142 | 4 | 44 | 260 | 171 | 390 | 1.44e-32 | 130 |
| Msa0749930 | AT3G03450.1 | 39.355 | 155 | 92 | 2 | 325 | 478 | 392 | 545 | 2.74e-31 | 127 |
| Msa0749930 | AT1G63100.1 | 32.110 | 218 | 139 | 3 | 48 | 259 | 244 | 458 | 2.78e-32 | 130 |
| Msa0749930 | AT1G63100.1 | 36.196 | 163 | 91 | 3 | 328 | 477 | 466 | 628 | 9.66e-25 | 108 |
| Msa0749930 | AT1G63100.2 | 32.110 | 218 | 139 | 3 | 48 | 259 | 269 | 483 | 2.94e-32 | 130 |
| Msa0749930 | AT1G63100.2 | 36.196 | 163 | 91 | 3 | 328 | 477 | 491 | 653 | 1.29e-24 | 107 |
| Msa0749930 | AT5G41920.1 | 32.020 | 203 | 134 | 3 | 51 | 249 | 38 | 240 | 1.73e-31 | 125 |
| Msa0749930 | AT5G41920.1 | 36.774 | 155 | 91 | 3 | 327 | 480 | 254 | 402 | 1.98e-20 | 93.6 |
| Msa0749930 | AT2G37650.1 | 24.709 | 429 | 255 | 8 | 56 | 478 | 347 | 713 | 4.71e-31 | 127 |
| Msa0749930 | AT2G37650.2 | 24.709 | 429 | 255 | 8 | 56 | 478 | 335 | 701 | 4.92e-31 | 127 |
| Msa0749930 | AT2G04890.1 | 33.491 | 212 | 136 | 3 | 56 | 267 | 53 | 259 | 9.92e-31 | 123 |
| Msa0749930 | AT2G04890.1 | 40.000 | 150 | 89 | 1 | 329 | 478 | 265 | 413 | 9.41e-28 | 115 |
| Msa0749930 | AT5G52510.1 | 25.986 | 431 | 243 | 12 | 61 | 478 | 273 | 640 | 3.64e-29 | 121 |
| Msa0749930 | AT1G07530.1 | 29.858 | 211 | 140 | 3 | 56 | 259 | 396 | 605 | 1.07e-27 | 117 |
| Msa0749930 | AT1G07530.1 | 28.859 | 149 | 106 | 0 | 329 | 477 | 616 | 764 | 7.61e-18 | 87.0 |
| Msa0749930 | AT5G66770.1 | 33.178 | 214 | 130 | 4 | 53 | 259 | 217 | 424 | 1.32e-23 | 104 |
| Msa0749930 | AT5G66770.1 | 32.468 | 154 | 101 | 3 | 328 | 478 | 431 | 584 | 1.68e-16 | 82.8 |
| Msa0749930 | AT4G37650.1 | 26.432 | 227 | 135 | 4 | 56 | 258 | 146 | 364 | 1.54e-22 | 100 |
| Msa0749930 | AT4G37650.1 | 26.415 | 159 | 107 | 3 | 329 | 478 | 372 | 529 | 6.17e-11 | 65.1 |
| Msa0749930 | AT4G08250.1 | 29.596 | 223 | 139 | 7 | 47 | 255 | 98 | 316 | 3.05e-20 | 94.0 |
| Msa0749930 | AT3G50650.1 | 30.876 | 217 | 133 | 4 | 58 | 267 | 177 | 383 | 5.63e-20 | 93.2 |
| Msa0749930 | AT3G50650.1 | 28.859 | 149 | 99 | 3 | 337 | 478 | 394 | 542 | 1.74e-13 | 73.2 |
| Msa0749930 | AT3G49950.1 | 27.461 | 193 | 120 | 4 | 52 | 229 | 26 | 213 | 6.62e-13 | 70.9 |
| Msa0749930 | AT3G49950.1 | 27.517 | 149 | 101 | 3 | 331 | 477 | 264 | 407 | 2.62e-11 | 65.9 |
Find 92 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATTCTTGTGGAATTTA+AGG | 0.089377 | 5_2:-3402653 | None:intergenic |
| TATGCTTTCTGAAGAAATTA+TGG | 0.230947 | 5_2:+3402675 | Msa0749930:CDS |
| TTTGAGTTTCTTGACATAAT+AGG | 0.254589 | 5_2:-3403123 | None:intergenic |
| TGCAGCATTGTTTGATTGTT+TGG | 0.259936 | 5_2:+3403413 | Msa0749930:CDS |
| CAGCTTCTTCAGAAAGCTTA+TGG | 0.264058 | 5_2:-3402933 | None:intergenic |
| TCATCAGCAGAAAGAGGTTT+TGG | 0.271986 | 5_2:+3402900 | Msa0749930:CDS |
| AACATACCATAATAGCTTAA+AGG | 0.277960 | 5_2:-3403603 | None:intergenic |
| ACAATGCTGCATAAGAATAT+AGG | 0.281076 | 5_2:-3403401 | None:intergenic |
| TCAAGCTATTGTTGAATCTA+TGG | 0.285430 | 5_2:+3402756 | Msa0749930:CDS |
| TGCTAAGAACAGGGTTGAAT+TGG | 0.312189 | 5_2:-3402975 | None:intergenic |
| CTCAAATGAGGAGGACCTTC+AGG | 0.312197 | 5_2:-3402865 | None:intergenic |
| TTGTGGAATTTAAGGCTCTA+TGG | 0.321651 | 5_2:-3402645 | None:intergenic |
| ATGAACCAAAACACATCATT+AGG | 0.327281 | 5_2:+3403174 | Msa0749930:CDS |
| ATCTATGGAAGGTGAGAAAA+TGG | 0.335503 | 5_2:+3402771 | Msa0749930:CDS |
| TCTGCAGTTACATTCCCTTT+TGG | 0.339325 | 5_2:+3403065 | Msa0749930:CDS |
| AACATCCCTAGAGAGATTAA+AGG | 0.354098 | 5_2:+3403452 | Msa0749930:CDS |
| AAGCTATTATGGTATGTTGC+AGG | 0.357915 | 5_2:+3403608 | Msa0749930:CDS |
| AATCACCTAATGATGTGTTT+TGG | 0.364016 | 5_2:-3403179 | None:intergenic |
| TAGTAACTTGCTGGCAAGAT+AGG | 0.366004 | 5_2:+3403694 | Msa0749930:CDS |
| CAATGCTGCATAAGAATATA+GGG | 0.366018 | 5_2:-3403400 | None:intergenic |
| GACAAACTTCGTGTGAAAAC+CGG | 0.371883 | 5_2:+3403018 | Msa0749930:CDS |
| AATGTGCCTTTAAGCTATTA+TGG | 0.377946 | 5_2:+3403597 | Msa0749930:CDS |
| AGACTTGATTCGTGTGGATT+TGG | 0.381293 | 5_2:+3403573 | Msa0749930:CDS |
| TGTGCAAATCATGTAGCTTC+TGG | 0.411195 | 5_2:+3402487 | Msa0749930:CDS |
| TCACCTAGCATAGGAGGAAT+AGG | 0.416008 | 5_2:+3402388 | Msa0749930:CDS |
| TATAGAATGAGAGAAGAAAA+TGG | 0.416830 | 5_2:+3403666 | Msa0749930:CDS |
| CTGATAGGATACTTAAAACT+TGG | 0.427400 | 5_2:+3402614 | Msa0749930:CDS |
| AGAAGGTTTCTACAGAGTTA+TGG | 0.432910 | 5_2:+3403633 | Msa0749930:CDS |
| TCACTGAAGCACTTGCTGAT+AGG | 0.433040 | 5_2:+3402599 | Msa0749930:CDS |
| ATGGTTGTGTAGTAACTTGC+TGG | 0.448692 | 5_2:+3403685 | Msa0749930:CDS |
| TCGGTTACAACCATGACTTT+TGG | 0.460163 | 5_2:-3403327 | None:intergenic |
| TCACAACGGTTCAACATTGA+TGG | 0.461983 | 5_2:+3403362 | Msa0749930:CDS |
| TTGCACAAGTGATTAACAAA+TGG | 0.462673 | 5_2:-3402471 | None:intergenic |
| CAACAACAGCTTGGAGAGCT+AGG | 0.464849 | 5_2:+3403727 | Msa0749930:CDS |
| TCTCAACCTTTAATCTCTCT+AGG | 0.466126 | 5_2:-3403458 | None:intergenic |
| ATTCATCATCCAAGGCCAAA+AGG | 0.470579 | 5_2:-3403080 | None:intergenic |
| GATGATGTTGAATCGGGACT+TGG | 0.470973 | 5_2:-3403234 | None:intergenic |
| GTTGTGATTCGAGTCCTGTT+CGG | 0.477667 | 5_2:-3403346 | None:intergenic |
| GAATCTATGTTACAAGAAGA+AGG | 0.480629 | 5_2:+3402313 | Msa0749930:CDS |
| AGAATTGAAATCTGAGGAAA+GGG | 0.483022 | 5_2:+3402435 | Msa0749930:CDS |
| ATATATGCCACCTTCAAGAA+AGG | 0.483743 | 5_2:-3402724 | None:intergenic |
| ATTATGTCAAGAAACTCAAA+TGG | 0.483850 | 5_2:+3403126 | Msa0749930:CDS |
| CCTCCTCATTTGAGAATCAC+AGG | 0.490720 | 5_2:+3402874 | Msa0749930:CDS |
| AAGGTTGAGAAGATGCTGTT+TGG | 0.498109 | 5_2:+3403471 | Msa0749930:CDS |
| AGAAAGCATAATAATTCTTG+TGG | 0.500494 | 5_2:-3402662 | None:intergenic |
| CTCTGCATAGTGTCTCCATC+AGG | 0.502156 | 5_2:-3402562 | None:intergenic |
| AGTCATGGTTGTAACCGAAC+AGG | 0.503090 | 5_2:+3403332 | Msa0749930:CDS |
| CGACGATGATGATGTTGAAT+CGG | 0.503259 | 5_2:-3403241 | None:intergenic |
| GCTAGGTGAAACTGACATCA+TGG | 0.505670 | 5_2:-3402374 | None:intergenic |
| GAGAATTGAAATCTGAGGAA+AGG | 0.506938 | 5_2:+3402434 | Msa0749930:CDS |
| TCTCTACTAAGCCATGGATA+AGG | 0.507017 | 5_2:-3402415 | None:intergenic |
| AGGATACTTAAAACTTGGCC+TGG | 0.515401 | 5_2:+3402619 | Msa0749930:CDS |
| CTACAGAGTTATGGTTGTGA+GGG | 0.516522 | 5_2:+3403642 | Msa0749930:CDS |
| TCACAGCTTGCAACTCCTGA+TGG | 0.516747 | 5_2:+3402547 | Msa0749930:CDS |
| TTCATCATCCAAGGCCAAAA+GGG | 0.519127 | 5_2:-3403079 | None:intergenic |
| TTCAATTCTCTACTAAGCCA+TGG | 0.520245 | 5_2:-3402421 | None:intergenic |
| CTCAACCTTTAATCTCTCTA+GGG | 0.522051 | 5_2:-3403457 | None:intergenic |
| TATATGCCACCTTCAAGAAA+GGG | 0.525767 | 5_2:-3402723 | None:intergenic |
| TTGTGAAGGAGCTGAAAGAA+AGG | 0.532875 | 5_2:+3403518 | Msa0749930:CDS |
| AAAAGAGCAATCCATTGTGC+AGG | 0.535750 | 5_2:-3402823 | None:intergenic |
| AGGGATTCATCAGCAGAAAG+AGG | 0.542783 | 5_2:+3402894 | Msa0749930:CDS |
| TTCATCTGCTTCAATGAATG+TGG | 0.545313 | 5_2:+3403272 | Msa0749930:CDS |
| TTTAAGGCTCTATGGAGTCC+AGG | 0.546774 | 5_2:-3402637 | None:intergenic |
| ACTAATTGCAAGCGCCTCGC+CGG | 0.552940 | 5_2:-3403037 | None:intergenic |
| GACGATGATGATGTTGAATC+GGG | 0.555408 | 5_2:-3403240 | None:intergenic |
| ATGGTATGTTGCAGGCAAGA+AGG | 0.557823 | 5_2:+3403616 | Msa0749930:CDS |
| GATCCTATTCCTCCTATGCT+AGG | 0.562234 | 5_2:-3402391 | None:intergenic |
| TCAGTTTCACCTAGCATAGG+AGG | 0.562988 | 5_2:+3402382 | Msa0749930:CDS |
| AGAACAGGGTTGAATTGGAA+TGG | 0.565131 | 5_2:-3402970 | None:intergenic |
| TCTACAGAGTTATGGTTGTG+AGG | 0.567967 | 5_2:+3403641 | Msa0749930:CDS |
| ATTGAAGCAGATGAAGATGC+TGG | 0.572949 | 5_2:-3403264 | None:intergenic |
| GAGTTTGTCACCAAAAGTCA+TGG | 0.575658 | 5_2:+3403317 | Msa0749930:CDS |
| AAGAACATAATTGCTTGTGA+AGG | 0.580873 | 5_2:+3403504 | Msa0749930:CDS |
| ATCCCTGTGATTCTCAAATG+AGG | 0.584689 | 5_2:-3402877 | None:intergenic |
| TGAGGATGATTCATCATCCA+AGG | 0.589137 | 5_2:-3403088 | None:intergenic |
| AATCTATGTTACAAGAAGAA+GGG | 0.598643 | 5_2:+3402314 | Msa0749930:CDS |
| GAATAGGATCACCTTATCCA+TGG | 0.599511 | 5_2:+3402404 | Msa0749930:CDS |
| GCTATTGTTGAATCTATGGA+AGG | 0.607832 | 5_2:+3402760 | Msa0749930:CDS |
| TGAGAAGATGCTGTTTGGTG+AGG | 0.611876 | 5_2:+3403476 | Msa0749930:CDS |
| ATGTCAGTTTCACCTAGCAT+AGG | 0.614550 | 5_2:+3402379 | Msa0749930:CDS |
| ATCATGGAAAATAACTGTAG+AGG | 0.617197 | 5_2:-3402358 | None:intergenic |
| CTCCTCATTTGAGAATCACA+GGG | 0.617281 | 5_2:+3402875 | Msa0749930:CDS |
| TTTCTAGCTTGCTAAGAACA+GGG | 0.622441 | 5_2:-3402984 | None:intergenic |
| ACGGTTCAACATTGATGGAG+AGG | 0.639461 | 5_2:+3403367 | Msa0749930:CDS |
| TAGTAGAGAATTGAAATCTG+AGG | 0.644490 | 5_2:+3402429 | Msa0749930:CDS |
| TGGATGATGAATCATCCTCA+AGG | 0.648643 | 5_2:+3403091 | Msa0749930:CDS |
| ATGCTGCTGAACCTGCACAA+TGG | 0.650823 | 5_2:+3402812 | Msa0749930:CDS |
| GAATTGAAATCTGAGGAAAG+GGG | 0.651416 | 5_2:+3402436 | Msa0749930:CDS |
| TTTATGAGACTTGATTCGTG+TGG | 0.658284 | 5_2:+3403567 | Msa0749930:CDS |
| CCTGTGATTCTCAAATGAGG+AGG | 0.663636 | 5_2:-3402874 | None:intergenic |
| ACTTCGTGTGAAAACCGGCG+AGG | 0.733150 | 5_2:+3403023 | Msa0749930:CDS |
| GAACAGGACTCGAATCACAA+CGG | 0.767714 | 5_2:+3403348 | Msa0749930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTCTTGTGGAATTTA+AGG | - | chr5_2:3402656-3402675 | None:intergenic | 20.0% |
| !! | TGATTTACTTGAAAAAGATA+TGG | + | chr5_2:3403197-3403216 | Msa0749930:CDS | 20.0% |
| !! | AATAATTCTTGTGGAATTTA+AGG | - | chr5_2:3402656-3402675 | None:intergenic | 20.0% |
| !! | TGATTTACTTGAAAAAGATA+TGG | + | chr5_2:3403197-3403216 | Msa0749930:CDS | 20.0% |
| ! | AATCTATGTTACAAGAAGAA+GGG | + | chr5_2:3402314-3402333 | Msa0749930:CDS | 25.0% |
| !! | AGAAAGCATAATAATTCTTG+TGG | - | chr5_2:3402665-3402684 | None:intergenic | 25.0% |
| !! | TATGCTTTCTGAAGAAATTA+TGG | + | chr5_2:3402675-3402694 | Msa0749930:CDS | 25.0% |
| !! | TTTGAGTTTCTTGACATAAT+AGG | - | chr5_2:3403126-3403145 | None:intergenic | 25.0% |
| ! | ATTATGTCAAGAAACTCAAA+TGG | + | chr5_2:3403126-3403145 | Msa0749930:CDS | 25.0% |
| ! | CTTGAAAAAGATATGGTTAA+TGG | + | chr5_2:3403204-3403223 | Msa0749930:CDS | 25.0% |
| ! | GACATGAAAAACTTGATAAA+TGG | + | chr5_2:3403544-3403563 | Msa0749930:CDS | 25.0% |
| ! | AACATACCATAATAGCTTAA+AGG | - | chr5_2:3403606-3403625 | None:intergenic | 25.0% |
| ! | TATAGAATGAGAGAAGAAAA+TGG | + | chr5_2:3403666-3403685 | Msa0749930:CDS | 25.0% |
| ! | AATCTATGTTACAAGAAGAA+GGG | + | chr5_2:3402314-3402333 | Msa0749930:CDS | 25.0% |
| !! | AGAAAGCATAATAATTCTTG+TGG | - | chr5_2:3402665-3402684 | None:intergenic | 25.0% |
| !! | TATGCTTTCTGAAGAAATTA+TGG | + | chr5_2:3402675-3402694 | Msa0749930:CDS | 25.0% |
| !! | TTTGAGTTTCTTGACATAAT+AGG | - | chr5_2:3403126-3403145 | None:intergenic | 25.0% |
| ! | ATTATGTCAAGAAACTCAAA+TGG | + | chr5_2:3403126-3403145 | Msa0749930:CDS | 25.0% |
| ! | CTTGAAAAAGATATGGTTAA+TGG | + | chr5_2:3403204-3403223 | Msa0749930:CDS | 25.0% |
| ! | GACATGAAAAACTTGATAAA+TGG | + | chr5_2:3403544-3403563 | Msa0749930:CDS | 25.0% |
| ! | AACATACCATAATAGCTTAA+AGG | - | chr5_2:3403606-3403625 | None:intergenic | 25.0% |
| ! | TATAGAATGAGAGAAGAAAA+TGG | + | chr5_2:3403666-3403685 | Msa0749930:CDS | 25.0% |
| GAATCTATGTTACAAGAAGA+AGG | + | chr5_2:3402313-3402332 | Msa0749930:CDS | 30.0% | |
| ATCATGGAAAATAACTGTAG+AGG | - | chr5_2:3402361-3402380 | None:intergenic | 30.0% | |
| TAGTAGAGAATTGAAATCTG+AGG | + | chr5_2:3402429-3402448 | Msa0749930:CDS | 30.0% | |
| AGAATTGAAATCTGAGGAAA+GGG | + | chr5_2:3402435-3402454 | Msa0749930:CDS | 30.0% | |
| TTGCACAAGTGATTAACAAA+TGG | - | chr5_2:3402474-3402493 | None:intergenic | 30.0% | |
| CTGATAGGATACTTAAAACT+TGG | + | chr5_2:3402614-3402633 | Msa0749930:CDS | 30.0% | |
| TCAAGCTATTGTTGAATCTA+TGG | + | chr5_2:3402756-3402775 | Msa0749930:CDS | 30.0% | |
| !!! | TGTGTTTTGGTTCATAAACA+TGG | - | chr5_2:3403169-3403188 | None:intergenic | 30.0% |
| ATGAACCAAAACACATCATT+AGG | + | chr5_2:3403174-3403193 | Msa0749930:CDS | 30.0% | |
| ! | AATCACCTAATGATGTGTTT+TGG | - | chr5_2:3403182-3403201 | None:intergenic | 30.0% |
| ! | AGAGTTTTCTCAATGCTTTA+TGG | + | chr5_2:3403295-3403314 | Msa0749930:CDS | 30.0% |
| CAATGCTGCATAAGAATATA+GGG | - | chr5_2:3403403-3403422 | None:intergenic | 30.0% | |
| ACAATGCTGCATAAGAATAT+AGG | - | chr5_2:3403404-3403423 | None:intergenic | 30.0% | |
| AAGAACATAATTGCTTGTGA+AGG | + | chr5_2:3403504-3403523 | Msa0749930:CDS | 30.0% | |
| AATGTGCCTTTAAGCTATTA+TGG | + | chr5_2:3403597-3403616 | Msa0749930:CDS | 30.0% | |
| GAATCTATGTTACAAGAAGA+AGG | + | chr5_2:3402313-3402332 | Msa0749930:CDS | 30.0% | |
| ATCATGGAAAATAACTGTAG+AGG | - | chr5_2:3402361-3402380 | None:intergenic | 30.0% | |
| TAGTAGAGAATTGAAATCTG+AGG | + | chr5_2:3402429-3402448 | Msa0749930:CDS | 30.0% | |
| AGAATTGAAATCTGAGGAAA+GGG | + | chr5_2:3402435-3402454 | Msa0749930:CDS | 30.0% | |
| TTGCACAAGTGATTAACAAA+TGG | - | chr5_2:3402474-3402493 | None:intergenic | 30.0% | |
| CTGATAGGATACTTAAAACT+TGG | + | chr5_2:3402614-3402633 | Msa0749930:CDS | 30.0% | |
| TCAAGCTATTGTTGAATCTA+TGG | + | chr5_2:3402756-3402775 | Msa0749930:CDS | 30.0% | |
| !!! | TGTGTTTTGGTTCATAAACA+TGG | - | chr5_2:3403169-3403188 | None:intergenic | 30.0% |
| ATGAACCAAAACACATCATT+AGG | + | chr5_2:3403174-3403193 | Msa0749930:CDS | 30.0% | |
| ! | AATCACCTAATGATGTGTTT+TGG | - | chr5_2:3403182-3403201 | None:intergenic | 30.0% |
| ! | AGAGTTTTCTCAATGCTTTA+TGG | + | chr5_2:3403295-3403314 | Msa0749930:CDS | 30.0% |
| CAATGCTGCATAAGAATATA+GGG | - | chr5_2:3403403-3403422 | None:intergenic | 30.0% | |
| ACAATGCTGCATAAGAATAT+AGG | - | chr5_2:3403404-3403423 | None:intergenic | 30.0% | |
| AAGAACATAATTGCTTGTGA+AGG | + | chr5_2:3403504-3403523 | Msa0749930:CDS | 30.0% | |
| AATGTGCCTTTAAGCTATTA+TGG | + | chr5_2:3403597-3403616 | Msa0749930:CDS | 30.0% | |
| TTCAATTCTCTACTAAGCCA+TGG | - | chr5_2:3402424-3402443 | None:intergenic | 35.0% | |
| GAGAATTGAAATCTGAGGAA+AGG | + | chr5_2:3402434-3402453 | Msa0749930:CDS | 35.0% | |
| GAATTGAAATCTGAGGAAAG+GGG | + | chr5_2:3402436-3402455 | Msa0749930:CDS | 35.0% | |
| ! | TTGTGGAATTTAAGGCTCTA+TGG | - | chr5_2:3402648-3402667 | None:intergenic | 35.0% |
| TATATGCCACCTTCAAGAAA+GGG | - | chr5_2:3402726-3402745 | None:intergenic | 35.0% | |
| ATATATGCCACCTTCAAGAA+AGG | - | chr5_2:3402727-3402746 | None:intergenic | 35.0% | |
| GCTATTGTTGAATCTATGGA+AGG | + | chr5_2:3402760-3402779 | Msa0749930:CDS | 35.0% | |
| ATCTATGGAAGGTGAGAAAA+TGG | + | chr5_2:3402771-3402790 | Msa0749930:CDS | 35.0% | |
| !!! | AAAGAGGTTTTGGAGCAAAT+GGG | + | chr5_2:3402910-3402929 | Msa0749930:CDS | 35.0% |
| !! | TTTCTAGCTTGCTAAGAACA+GGG | - | chr5_2:3402987-3403006 | None:intergenic | 35.0% |
| !!! | TTTTCTAGCTTGCTAAGAAC+AGG | - | chr5_2:3402988-3403007 | None:intergenic | 35.0% |
| ! | AATAGGAGTTTTTCTCCTTG+AGG | - | chr5_2:3403109-3403128 | None:intergenic | 35.0% |
| ! | TCATAAACATGGCTTTTTGC+AGG | - | chr5_2:3403158-3403177 | None:intergenic | 35.0% |
| TTCATCTGCTTCAATGAATG+TGG | + | chr5_2:3403272-3403291 | Msa0749930:CDS | 35.0% | |
| TGCAGCATTGTTTGATTGTT+TGG | + | chr5_2:3403413-3403432 | Msa0749930:CDS | 35.0% | |
| AACATCCCTAGAGAGATTAA+AGG | + | chr5_2:3403452-3403471 | Msa0749930:CDS | 35.0% | |
| CTCAACCTTTAATCTCTCTA+GGG | - | chr5_2:3403460-3403479 | None:intergenic | 35.0% | |
| TCTCAACCTTTAATCTCTCT+AGG | - | chr5_2:3403461-3403480 | None:intergenic | 35.0% | |
| ! | TTTATGAGACTTGATTCGTG+TGG | + | chr5_2:3403567-3403586 | Msa0749930:CDS | 35.0% |
| AAGCTATTATGGTATGTTGC+AGG | + | chr5_2:3403608-3403627 | Msa0749930:CDS | 35.0% | |
| AGAAGGTTTCTACAGAGTTA+TGG | + | chr5_2:3403633-3403652 | Msa0749930:CDS | 35.0% | |
| !!! | CTTTGTTTTCAACAACAGCT+TGG | + | chr5_2:3403718-3403737 | Msa0749930:CDS | 35.0% |
| TTCAATTCTCTACTAAGCCA+TGG | - | chr5_2:3402424-3402443 | None:intergenic | 35.0% | |
| GAGAATTGAAATCTGAGGAA+AGG | + | chr5_2:3402434-3402453 | Msa0749930:CDS | 35.0% | |
| GAATTGAAATCTGAGGAAAG+GGG | + | chr5_2:3402436-3402455 | Msa0749930:CDS | 35.0% | |
| ! | TTGTGGAATTTAAGGCTCTA+TGG | - | chr5_2:3402648-3402667 | None:intergenic | 35.0% |
| TATATGCCACCTTCAAGAAA+GGG | - | chr5_2:3402726-3402745 | None:intergenic | 35.0% | |
| ATATATGCCACCTTCAAGAA+AGG | - | chr5_2:3402727-3402746 | None:intergenic | 35.0% | |
| GCTATTGTTGAATCTATGGA+AGG | + | chr5_2:3402760-3402779 | Msa0749930:CDS | 35.0% | |
| ATCTATGGAAGGTGAGAAAA+TGG | + | chr5_2:3402771-3402790 | Msa0749930:CDS | 35.0% | |
| !!! | AAAGAGGTTTTGGAGCAAAT+GGG | + | chr5_2:3402910-3402929 | Msa0749930:CDS | 35.0% |
| !! | TTTCTAGCTTGCTAAGAACA+GGG | - | chr5_2:3402987-3403006 | None:intergenic | 35.0% |
| !!! | TTTTCTAGCTTGCTAAGAAC+AGG | - | chr5_2:3402988-3403007 | None:intergenic | 35.0% |
| ! | AATAGGAGTTTTTCTCCTTG+AGG | - | chr5_2:3403109-3403128 | None:intergenic | 35.0% |
| ! | TCATAAACATGGCTTTTTGC+AGG | - | chr5_2:3403158-3403177 | None:intergenic | 35.0% |
| TTCATCTGCTTCAATGAATG+TGG | + | chr5_2:3403272-3403291 | Msa0749930:CDS | 35.0% | |
| TGCAGCATTGTTTGATTGTT+TGG | + | chr5_2:3403413-3403432 | Msa0749930:CDS | 35.0% | |
| AACATCCCTAGAGAGATTAA+AGG | + | chr5_2:3403452-3403471 | Msa0749930:CDS | 35.0% | |
| CTCAACCTTTAATCTCTCTA+GGG | - | chr5_2:3403460-3403479 | None:intergenic | 35.0% | |
| TCTCAACCTTTAATCTCTCT+AGG | - | chr5_2:3403461-3403480 | None:intergenic | 35.0% | |
| ! | TTTATGAGACTTGATTCGTG+TGG | + | chr5_2:3403567-3403586 | Msa0749930:CDS | 35.0% |
| AAGCTATTATGGTATGTTGC+AGG | + | chr5_2:3403608-3403627 | Msa0749930:CDS | 35.0% | |
| AGAAGGTTTCTACAGAGTTA+TGG | + | chr5_2:3403633-3403652 | Msa0749930:CDS | 35.0% | |
| !!! | CTTTGTTTTCAACAACAGCT+TGG | + | chr5_2:3403718-3403737 | Msa0749930:CDS | 35.0% |
| ATGTCAGTTTCACCTAGCAT+AGG | + | chr5_2:3402379-3402398 | Msa0749930:CDS | 40.0% | |
| GAATAGGATCACCTTATCCA+TGG | + | chr5_2:3402404-3402423 | Msa0749930:CDS | 40.0% | |
| TCTCTACTAAGCCATGGATA+AGG | - | chr5_2:3402418-3402437 | None:intergenic | 40.0% | |
| TGTGCAAATCATGTAGCTTC+TGG | + | chr5_2:3402487-3402506 | Msa0749930:CDS | 40.0% | |
| AGGATACTTAAAACTTGGCC+TGG | + | chr5_2:3402619-3402638 | Msa0749930:CDS | 40.0% | |
| ! | TGAGCTTTTCCCTTTCTTGA+AGG | + | chr5_2:3402714-3402733 | Msa0749930:CDS | 40.0% |
| AAAAGAGCAATCCATTGTGC+AGG | - | chr5_2:3402826-3402845 | None:intergenic | 40.0% | |
| CTCCTCATTTGAGAATCACA+GGG | + | chr5_2:3402875-3402894 | Msa0749930:CDS | 40.0% | |
| ATCCCTGTGATTCTCAAATG+AGG | - | chr5_2:3402880-3402899 | None:intergenic | 40.0% | |
| ! | TCATCAGCAGAAAGAGGTTT+TGG | + | chr5_2:3402900-3402919 | Msa0749930:CDS | 40.0% |
| !!! | GAAAGAGGTTTTGGAGCAAA+TGG | + | chr5_2:3402909-3402928 | Msa0749930:CDS | 40.0% |
| CAGCTTCTTCAGAAAGCTTA+TGG | - | chr5_2:3402936-3402955 | None:intergenic | 40.0% | |
| AGAACAGGGTTGAATTGGAA+TGG | - | chr5_2:3402973-3402992 | None:intergenic | 40.0% | |
| TGCTAAGAACAGGGTTGAAT+TGG | - | chr5_2:3402978-3402997 | None:intergenic | 40.0% | |
| GACAAACTTCGTGTGAAAAC+CGG | + | chr5_2:3403018-3403037 | Msa0749930:CDS | 40.0% | |
| ! | TCTGCAGTTACATTCCCTTT+TGG | + | chr5_2:3403065-3403084 | Msa0749930:CDS | 40.0% |
| TTCATCATCCAAGGCCAAAA+GGG | - | chr5_2:3403082-3403101 | None:intergenic | 40.0% | |
| ATTCATCATCCAAGGCCAAA+AGG | - | chr5_2:3403083-3403102 | None:intergenic | 40.0% | |
| TGAGGATGATTCATCATCCA+AGG | - | chr5_2:3403091-3403110 | None:intergenic | 40.0% | |
| TGGATGATGAATCATCCTCA+AGG | + | chr5_2:3403091-3403110 | Msa0749930:CDS | 40.0% | |
| ! | GACGATGATGATGTTGAATC+GGG | - | chr5_2:3403243-3403262 | None:intergenic | 40.0% |
| ! | CGACGATGATGATGTTGAAT+CGG | - | chr5_2:3403244-3403263 | None:intergenic | 40.0% |
| ATTGAAGCAGATGAAGATGC+TGG | - | chr5_2:3403267-3403286 | None:intergenic | 40.0% | |
| GAGTTTGTCACCAAAAGTCA+TGG | + | chr5_2:3403317-3403336 | Msa0749930:CDS | 40.0% | |
| ! | TCGGTTACAACCATGACTTT+TGG | - | chr5_2:3403330-3403349 | None:intergenic | 40.0% |
| TCACAACGGTTCAACATTGA+TGG | + | chr5_2:3403362-3403381 | Msa0749930:CDS | 40.0% | |
| AAGGTTGAGAAGATGCTGTT+TGG | + | chr5_2:3403471-3403490 | Msa0749930:CDS | 40.0% | |
| TTGTGAAGGAGCTGAAAGAA+AGG | + | chr5_2:3403518-3403537 | Msa0749930:CDS | 40.0% | |
| ! | AGACTTGATTCGTGTGGATT+TGG | + | chr5_2:3403573-3403592 | Msa0749930:CDS | 40.0% |
| TCTACAGAGTTATGGTTGTG+AGG | + | chr5_2:3403641-3403660 | Msa0749930:CDS | 40.0% | |
| CTACAGAGTTATGGTTGTGA+GGG | + | chr5_2:3403642-3403661 | Msa0749930:CDS | 40.0% | |
| ! | ATGGTTGTGTAGTAACTTGC+TGG | + | chr5_2:3403685-3403704 | Msa0749930:CDS | 40.0% |
| !! | TAGTAACTTGCTGGCAAGAT+AGG | + | chr5_2:3403694-3403713 | Msa0749930:CDS | 40.0% |
| ATGTCAGTTTCACCTAGCAT+AGG | + | chr5_2:3402379-3402398 | Msa0749930:CDS | 40.0% | |
| GAATAGGATCACCTTATCCA+TGG | + | chr5_2:3402404-3402423 | Msa0749930:CDS | 40.0% | |
| TCTCTACTAAGCCATGGATA+AGG | - | chr5_2:3402418-3402437 | None:intergenic | 40.0% | |
| TGTGCAAATCATGTAGCTTC+TGG | + | chr5_2:3402487-3402506 | Msa0749930:CDS | 40.0% | |
| AGGATACTTAAAACTTGGCC+TGG | + | chr5_2:3402619-3402638 | Msa0749930:CDS | 40.0% | |
| ! | TGAGCTTTTCCCTTTCTTGA+AGG | + | chr5_2:3402714-3402733 | Msa0749930:CDS | 40.0% |
| AAAAGAGCAATCCATTGTGC+AGG | - | chr5_2:3402826-3402845 | None:intergenic | 40.0% | |
| CTCCTCATTTGAGAATCACA+GGG | + | chr5_2:3402875-3402894 | Msa0749930:CDS | 40.0% | |
| ATCCCTGTGATTCTCAAATG+AGG | - | chr5_2:3402880-3402899 | None:intergenic | 40.0% | |
| ! | TCATCAGCAGAAAGAGGTTT+TGG | + | chr5_2:3402900-3402919 | Msa0749930:CDS | 40.0% |
| !!! | GAAAGAGGTTTTGGAGCAAA+TGG | + | chr5_2:3402909-3402928 | Msa0749930:CDS | 40.0% |
| CAGCTTCTTCAGAAAGCTTA+TGG | - | chr5_2:3402936-3402955 | None:intergenic | 40.0% | |
| AGAACAGGGTTGAATTGGAA+TGG | - | chr5_2:3402973-3402992 | None:intergenic | 40.0% | |
| TGCTAAGAACAGGGTTGAAT+TGG | - | chr5_2:3402978-3402997 | None:intergenic | 40.0% | |
| GACAAACTTCGTGTGAAAAC+CGG | + | chr5_2:3403018-3403037 | Msa0749930:CDS | 40.0% | |
| ! | TCTGCAGTTACATTCCCTTT+TGG | + | chr5_2:3403065-3403084 | Msa0749930:CDS | 40.0% |
| TTCATCATCCAAGGCCAAAA+GGG | - | chr5_2:3403082-3403101 | None:intergenic | 40.0% | |
| ATTCATCATCCAAGGCCAAA+AGG | - | chr5_2:3403083-3403102 | None:intergenic | 40.0% | |
| TGAGGATGATTCATCATCCA+AGG | - | chr5_2:3403091-3403110 | None:intergenic | 40.0% | |
| TGGATGATGAATCATCCTCA+AGG | + | chr5_2:3403091-3403110 | Msa0749930:CDS | 40.0% | |
| ! | GACGATGATGATGTTGAATC+GGG | - | chr5_2:3403243-3403262 | None:intergenic | 40.0% |
| ! | CGACGATGATGATGTTGAAT+CGG | - | chr5_2:3403244-3403263 | None:intergenic | 40.0% |
| ATTGAAGCAGATGAAGATGC+TGG | - | chr5_2:3403267-3403286 | None:intergenic | 40.0% | |
| GAGTTTGTCACCAAAAGTCA+TGG | + | chr5_2:3403317-3403336 | Msa0749930:CDS | 40.0% | |
| ! | TCGGTTACAACCATGACTTT+TGG | - | chr5_2:3403330-3403349 | None:intergenic | 40.0% |
| TCACAACGGTTCAACATTGA+TGG | + | chr5_2:3403362-3403381 | Msa0749930:CDS | 40.0% | |
| AAGGTTGAGAAGATGCTGTT+TGG | + | chr5_2:3403471-3403490 | Msa0749930:CDS | 40.0% | |
| TTGTGAAGGAGCTGAAAGAA+AGG | + | chr5_2:3403518-3403537 | Msa0749930:CDS | 40.0% | |
| ! | AGACTTGATTCGTGTGGATT+TGG | + | chr5_2:3403573-3403592 | Msa0749930:CDS | 40.0% |
| TCTACAGAGTTATGGTTGTG+AGG | + | chr5_2:3403641-3403660 | Msa0749930:CDS | 40.0% | |
| CTACAGAGTTATGGTTGTGA+GGG | + | chr5_2:3403642-3403661 | Msa0749930:CDS | 40.0% | |
| ! | ATGGTTGTGTAGTAACTTGC+TGG | + | chr5_2:3403685-3403704 | Msa0749930:CDS | 40.0% |
| !! | TAGTAACTTGCTGGCAAGAT+AGG | + | chr5_2:3403694-3403713 | Msa0749930:CDS | 40.0% |
| GCTAGGTGAAACTGACATCA+TGG | - | chr5_2:3402377-3402396 | None:intergenic | 45.0% | |
| TCAGTTTCACCTAGCATAGG+AGG | + | chr5_2:3402382-3402401 | Msa0749930:CDS | 45.0% | |
| TCACCTAGCATAGGAGGAAT+AGG | + | chr5_2:3402388-3402407 | Msa0749930:CDS | 45.0% | |
| GATCCTATTCCTCCTATGCT+AGG | - | chr5_2:3402394-3402413 | None:intergenic | 45.0% | |
| ! | TCACTGAAGCACTTGCTGAT+AGG | + | chr5_2:3402599-3402618 | Msa0749930:CDS | 45.0% |
| ! | TTTAAGGCTCTATGGAGTCC+AGG | - | chr5_2:3402640-3402659 | None:intergenic | 45.0% |
| ! | GCTTTTCCCTTTCTTGAAGG+TGG | + | chr5_2:3402717-3402736 | Msa0749930:CDS | 45.0% |
| !! | GTTTTGAGTGCAAGACCTGA+AGG | + | chr5_2:3402850-3402869 | Msa0749930:CDS | 45.0% |
| CCTGTGATTCTCAAATGAGG+AGG | - | chr5_2:3402877-3402896 | None:intergenic | 45.0% | |
| CCTCCTCATTTGAGAATCAC+AGG | + | chr5_2:3402874-3402893 | Msa0749930:CDS | 45.0% | |
| AGGGATTCATCAGCAGAAAG+AGG | + | chr5_2:3402894-3402913 | Msa0749930:CDS | 45.0% | |
| ! | GTTACATTCCCTTTTGGCCT+TGG | + | chr5_2:3403071-3403090 | Msa0749930:CDS | 45.0% |
| GATGATGTTGAATCGGGACT+TGG | - | chr5_2:3403237-3403256 | None:intergenic | 45.0% | |
| AGTCATGGTTGTAACCGAAC+AGG | + | chr5_2:3403332-3403351 | Msa0749930:CDS | 45.0% | |
| GTTGTGATTCGAGTCCTGTT+CGG | - | chr5_2:3403349-3403368 | None:intergenic | 45.0% | |
| GAACAGGACTCGAATCACAA+CGG | + | chr5_2:3403348-3403367 | Msa0749930:CDS | 45.0% | |
| ACGGTTCAACATTGATGGAG+AGG | + | chr5_2:3403367-3403386 | Msa0749930:CDS | 45.0% | |
| ! | TGAGAAGATGCTGTTTGGTG+AGG | + | chr5_2:3403476-3403495 | Msa0749930:CDS | 45.0% |
| ATGGTATGTTGCAGGCAAGA+AGG | + | chr5_2:3403616-3403635 | Msa0749930:CDS | 45.0% | |
| GCTAGGTGAAACTGACATCA+TGG | - | chr5_2:3402377-3402396 | None:intergenic | 45.0% | |
| TCAGTTTCACCTAGCATAGG+AGG | + | chr5_2:3402382-3402401 | Msa0749930:CDS | 45.0% | |
| TCACCTAGCATAGGAGGAAT+AGG | + | chr5_2:3402388-3402407 | Msa0749930:CDS | 45.0% | |
| GATCCTATTCCTCCTATGCT+AGG | - | chr5_2:3402394-3402413 | None:intergenic | 45.0% | |
| ! | TCACTGAAGCACTTGCTGAT+AGG | + | chr5_2:3402599-3402618 | Msa0749930:CDS | 45.0% |
| ! | TTTAAGGCTCTATGGAGTCC+AGG | - | chr5_2:3402640-3402659 | None:intergenic | 45.0% |
| ! | GCTTTTCCCTTTCTTGAAGG+TGG | + | chr5_2:3402717-3402736 | Msa0749930:CDS | 45.0% |
| !! | GTTTTGAGTGCAAGACCTGA+AGG | + | chr5_2:3402850-3402869 | Msa0749930:CDS | 45.0% |
| CCTGTGATTCTCAAATGAGG+AGG | - | chr5_2:3402877-3402896 | None:intergenic | 45.0% | |
| CCTCCTCATTTGAGAATCAC+AGG | + | chr5_2:3402874-3402893 | Msa0749930:CDS | 45.0% | |
| AGGGATTCATCAGCAGAAAG+AGG | + | chr5_2:3402894-3402913 | Msa0749930:CDS | 45.0% | |
| ! | GTTACATTCCCTTTTGGCCT+TGG | + | chr5_2:3403071-3403090 | Msa0749930:CDS | 45.0% |
| GATGATGTTGAATCGGGACT+TGG | - | chr5_2:3403237-3403256 | None:intergenic | 45.0% | |
| AGTCATGGTTGTAACCGAAC+AGG | + | chr5_2:3403332-3403351 | Msa0749930:CDS | 45.0% | |
| GTTGTGATTCGAGTCCTGTT+CGG | - | chr5_2:3403349-3403368 | None:intergenic | 45.0% | |
| GAACAGGACTCGAATCACAA+CGG | + | chr5_2:3403348-3403367 | Msa0749930:CDS | 45.0% | |
| ACGGTTCAACATTGATGGAG+AGG | + | chr5_2:3403367-3403386 | Msa0749930:CDS | 45.0% | |
| ! | TGAGAAGATGCTGTTTGGTG+AGG | + | chr5_2:3403476-3403495 | Msa0749930:CDS | 45.0% |
| ATGGTATGTTGCAGGCAAGA+AGG | + | chr5_2:3403616-3403635 | Msa0749930:CDS | 45.0% | |
| TCACAGCTTGCAACTCCTGA+TGG | + | chr5_2:3402547-3402566 | Msa0749930:CDS | 50.0% | |
| CTCTGCATAGTGTCTCCATC+AGG | - | chr5_2:3402565-3402584 | None:intergenic | 50.0% | |
| ATGCTGCTGAACCTGCACAA+TGG | + | chr5_2:3402812-3402831 | Msa0749930:CDS | 50.0% | |
| CTCAAATGAGGAGGACCTTC+AGG | - | chr5_2:3402868-3402887 | None:intergenic | 50.0% | |
| CAACAACAGCTTGGAGAGCT+AGG | + | chr5_2:3403727-3403746 | Msa0749930:CDS | 50.0% | |
| TCACAGCTTGCAACTCCTGA+TGG | + | chr5_2:3402547-3402566 | Msa0749930:CDS | 50.0% | |
| CTCTGCATAGTGTCTCCATC+AGG | - | chr5_2:3402565-3402584 | None:intergenic | 50.0% | |
| ATGCTGCTGAACCTGCACAA+TGG | + | chr5_2:3402812-3402831 | Msa0749930:CDS | 50.0% | |
| CTCAAATGAGGAGGACCTTC+AGG | - | chr5_2:3402868-3402887 | None:intergenic | 50.0% | |
| CAACAACAGCTTGGAGAGCT+AGG | + | chr5_2:3403727-3403746 | Msa0749930:CDS | 50.0% | |
| ACTTCGTGTGAAAACCGGCG+AGG | + | chr5_2:3403023-3403042 | Msa0749930:CDS | 55.0% | |
| ACTAATTGCAAGCGCCTCGC+CGG | - | chr5_2:3403040-3403059 | None:intergenic | 55.0% | |
| ACTTCGTGTGAAAACCGGCG+AGG | + | chr5_2:3403023-3403042 | Msa0749930:CDS | 55.0% | |
| ACTAATTGCAAGCGCCTCGC+CGG | - | chr5_2:3403040-3403059 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 3402310 | 3403755 | 3402310 | ID=Msa0749930;Name=Msa0749930 |
| chr5_2 | mRNA | 3402310 | 3403755 | 3402310 | ID=Msa0749930-mRNA-1;Parent=Msa0749930;Name=Msa0749930-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|481 |
| chr5_2 | exon | 3402310 | 3403755 | 3402310 | ID=Msa0749930-mRNA-1:exon:1191;Parent=Msa0749930-mRNA-1 |
| chr5_2 | CDS | 3402310 | 3403755 | 3402310 | ID=Msa0749930-mRNA-1:cds;Parent=Msa0749930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
