Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222340 | XP_013465355.1 | 96.540 | 607 | 4 | 2 | 1 | 607 | 1 | 590 | 0.0 | 1202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222340 | sp|Q9FJH6|AB1F_ARATH | 82.982 | 570 | 85 | 1 | 38 | 607 | 38 | 595 | 0.0 | 1005 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222340 | A0A072VMQ2 | 96.540 | 607 | 4 | 2 | 1 | 607 | 1 | 590 | 0.0 | 1202 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0086350 | Msa0222340 | 0.806418 | 8.307352e-50 | -8.615850e-47 |
| Msa0112760 | Msa0222340 | 0.804200 | 2.421618e-49 | -8.615850e-47 |
| Msa0132490 | Msa0222340 | 0.824803 | 6.621055e-54 | -8.615850e-47 |
| Msa0150560 | Msa0222340 | 0.818420 | 1.978852e-52 | -8.615850e-47 |
| Msa0190250 | Msa0222340 | 0.821360 | 4.208687e-53 | -8.615850e-47 |
| Msa0201060 | Msa0222340 | 0.802074 | 6.667013e-49 | -8.615850e-47 |
| Msa0222340 | Msa0243720 | 0.811454 | 6.944227e-51 | -8.615850e-47 |
| Msa0222340 | Msa0263840 | 0.964036 | 7.991668e-123 | -8.615850e-47 |
| Msa0222340 | Msa0276770 | 0.800930 | 1.143698e-48 | -8.615850e-47 |
| Msa0222340 | Msa0301680 | 0.958218 | 4.059399e-116 | -8.615850e-47 |
| Msa0222340 | Msa0326110 | 0.805676 | 1.189976e-49 | -8.615850e-47 |
| Msa0222340 | Msa0339070 | 0.938414 | 7.002785e-99 | -8.615850e-47 |
| Msa0222340 | Msa0344530 | 0.811054 | 8.482313e-51 | -8.615850e-47 |
| Msa0222340 | Msa0358730 | 0.818216 | 2.200365e-52 | -8.615850e-47 |
| Msa0222340 | Msa0388840 | 0.858514 | 7.819973e-63 | -8.615850e-47 |
| Msa0222340 | Msa0389810 | 0.810489 | 1.123872e-50 | -8.615850e-47 |
| Msa0222340 | Msa0409080 | 0.800379 | 1.481486e-48 | -8.615850e-47 |
| Msa0222340 | Msa0477130 | -0.828064 | 1.106455e-54 | -8.615850e-47 |
| Msa0222340 | Msa0498230 | 0.817343 | 3.463202e-52 | -8.615850e-47 |
| Msa0222340 | Msa0502100 | 0.822379 | 2.444609e-53 | -8.615850e-47 |
| Msa0222340 | Msa0615310 | 0.828938 | 6.807051e-55 | -8.615850e-47 |
| Msa0222340 | Msa0621750 | -0.805404 | 1.357082e-49 | -8.615850e-47 |
| Msa0222340 | Msa0628740 | 0.825074 | 5.714882e-54 | -8.615850e-47 |
| Msa0222340 | Msa0631990 | 0.800994 | 1.109654e-48 | -8.615850e-47 |
| Msa0222340 | Msa0640380 | 0.801573 | 8.448530e-49 | -8.615850e-47 |
| Msa0222340 | Msa0663920 | 0.801765 | 7.714781e-49 | -8.615850e-47 |
| Msa0222340 | Msa0666140 | 0.820209 | 7.742323e-53 | -8.615850e-47 |
| Msa0222340 | Msa0678820 | 0.808612 | 2.843103e-50 | -8.615850e-47 |
| Msa0222340 | Msa0698360 | 0.832107 | 1.141471e-55 | -8.615850e-47 |
| Msa0222340 | Msa0712080 | 0.808955 | 2.401878e-50 | -8.615850e-47 |
| Msa0222340 | Msa0749930 | 0.826261 | 2.990033e-54 | -8.615850e-47 |
| Msa0222340 | Msa0771720 | 0.801096 | 1.058074e-48 | -8.615850e-47 |
| Msa0222340 | Msa0798860 | 0.817804 | 2.726309e-52 | -8.615850e-47 |
| Msa0222340 | Msa0801360 | 0.805548 | 1.266062e-49 | -8.615850e-47 |
| Msa0222340 | Msa0807050 | 0.830177 | 3.400540e-55 | -8.615850e-47 |
| Msa0222340 | Msa0830420 | 0.827876 | 1.228102e-54 | -8.615850e-47 |
| Msa0222340 | Msa0831590 | 0.803258 | 3.798993e-49 | -8.615850e-47 |
| Msa0222340 | Msa0832990 | 0.829631 | 4.621124e-55 | -8.615850e-47 |
| Msa0222340 | Msa0835730 | 0.815616 | 8.440593e-52 | -8.615850e-47 |
| Msa0222340 | Msa0878880 | 0.844974 | 5.422312e-59 | -8.615850e-47 |
| Msa0222340 | Msa0944550 | 0.853628 | 2.106797e-61 | -8.615850e-47 |
| Msa0222340 | Msa0982270 | 0.809059 | 2.281630e-50 | -8.615850e-47 |
| Msa0222340 | Msa1002480 | 0.813703 | 2.238583e-51 | -8.615850e-47 |
| Msa0222340 | Msa1031810 | 0.850929 | 1.235823e-60 | -8.615850e-47 |
| Msa0222340 | Msa1032440 | 0.807366 | 5.235319e-50 | -8.615850e-47 |
| Msa0222340 | Msa1070850 | 0.855502 | 6.045068e-62 | -8.615850e-47 |
| Msa0222340 | Msa1075080 | -0.804071 | 2.575348e-49 | -8.615850e-47 |
| Msa0222340 | Msa1092090 | 0.811184 | 7.949450e-51 | -8.615850e-47 |
| Msa0222340 | Msa1115020 | 0.802589 | 5.222218e-49 | -8.615850e-47 |
| Msa0222340 | Msa1118110 | 0.818535 | 1.863445e-52 | -8.615850e-47 |
| Msa0222340 | Msa1118750 | 0.855000 | 8.461028e-62 | -8.615850e-47 |
| Msa0222340 | Msa1124540 | -0.807983 | 3.871325e-50 | -8.615850e-47 |
| Msa0222340 | Msa1129210 | 0.808546 | 2.936731e-50 | -8.615850e-47 |
| Msa0222340 | Msa1132950 | 0.836102 | 1.139247e-56 | -8.615850e-47 |
| Msa0222340 | Msa1143270 | 0.834538 | 2.829479e-56 | -8.615850e-47 |
| Msa0222340 | Msa1158670 | 0.857389 | 1.687092e-62 | -8.615850e-47 |
| Msa0222340 | Msa1212170 | 0.803341 | 3.651368e-49 | -8.615850e-47 |
| Msa0222340 | Msa1212250 | 0.809355 | 1.971623e-50 | -8.615850e-47 |
| Msa0222340 | Msa1217810 | 0.809911 | 1.497133e-50 | -8.615850e-47 |
| Msa0222340 | Msa1230830 | 0.822704 | 2.054682e-53 | -8.615850e-47 |
| Msa0222340 | Msa1277440 | 0.815191 | 1.048860e-51 | -8.615850e-47 |
| Msa0222340 | Msa1279210 | 0.801005 | 1.104405e-48 | -8.615850e-47 |
| Msa0222340 | Msa1307740 | 0.804437 | 2.161488e-49 | -8.615850e-47 |
| Msa0222340 | Msa1372580 | 0.818846 | 1.583846e-52 | -8.615850e-47 |
| Msa0222340 | Msa1376760 | 0.801154 | 1.029166e-48 | -8.615850e-47 |
| Msa0222340 | Msa1378230 | 0.820349 | 7.190866e-53 | -8.615850e-47 |
| Msa0222340 | Msa1382930 | 0.808524 | 2.969053e-50 | -8.615850e-47 |
| Msa0222340 | Msa1395440 | 0.800085 | 1.700342e-48 | -8.615850e-47 |
| Msa0222340 | Msa1434240 | 0.803295 | 3.731174e-49 | -8.615850e-47 |
| Msa0222340 | Msa1437680 | 0.831899 | 1.284616e-55 | -8.615850e-47 |
| Msa0222340 | Msa1438910 | 0.804074 | 2.572187e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222340 | MtrunA17_Chr2g0327291 | 96.540 | 607 | 4 | 2 | 1 | 607 | 1 | 590 | 0.0 | 1202 |
| Msa0222340 | MtrunA17_Chr4g0028471 | 87.852 | 568 | 57 | 1 | 40 | 607 | 35 | 590 | 0.0 | 1051 |
| Msa0222340 | MtrunA17_Chr3g0119921 | 42.430 | 535 | 283 | 6 | 83 | 596 | 177 | 707 | 2.02e-150 | 450 |
| Msa0222340 | MtrunA17_Chr7g0220881 | 40.472 | 551 | 287 | 6 | 83 | 596 | 156 | 702 | 2.36e-145 | 437 |
| Msa0222340 | MtrunA17_Chr1g0181461 | 42.000 | 550 | 280 | 10 | 83 | 596 | 2 | 548 | 2.43e-144 | 429 |
| Msa0222340 | MtrunA17_Chr8g0371361 | 41.486 | 552 | 284 | 7 | 83 | 599 | 156 | 703 | 3.81e-144 | 434 |
| Msa0222340 | MtrunA17_Chr3g0129301 | 30.755 | 530 | 343 | 8 | 82 | 591 | 107 | 632 | 3.00e-69 | 237 |
| Msa0222340 | MtrunA17_Chr3g0129301 | 26.531 | 245 | 147 | 4 | 83 | 323 | 435 | 650 | 3.37e-19 | 91.7 |
| Msa0222340 | MtrunA17_Chr4g0061601 | 26.122 | 245 | 128 | 9 | 396 | 605 | 391 | 617 | 5.56e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222340 | AT5G60790.1 | 82.982 | 570 | 85 | 1 | 38 | 607 | 38 | 595 | 0.0 | 1005 |
| Msa0222340 | AT3G54540.2 | 43.447 | 557 | 269 | 10 | 83 | 600 | 165 | 714 | 1.65e-153 | 459 |
| Msa0222340 | AT3G54540.1 | 43.447 | 557 | 269 | 10 | 83 | 600 | 165 | 714 | 1.65e-153 | 459 |
| Msa0222340 | AT1G64550.1 | 43.470 | 536 | 277 | 7 | 83 | 596 | 177 | 708 | 1.18e-151 | 454 |
| Msa0222340 | AT5G64840.1 | 31.191 | 529 | 342 | 7 | 82 | 591 | 99 | 624 | 1.31e-72 | 247 |
| Msa0222340 | AT5G64840.1 | 27.586 | 232 | 137 | 5 | 83 | 311 | 427 | 630 | 3.89e-17 | 85.9 |
| Msa0222340 | AT5G09930.1 | 30.769 | 533 | 345 | 8 | 83 | 595 | 86 | 614 | 2.62e-70 | 240 |
| Msa0222340 | AT5G09930.1 | 24.268 | 239 | 136 | 4 | 83 | 311 | 413 | 616 | 4.76e-15 | 79.0 |
Find 184 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCCCAAGATTTCCTTAA+TGG | 0.133001 | 2_1:-71555091 | Msa0222340:CDS |
| ATTTATGATGCTTATCAATT+TGG | 0.178671 | 2_1:-71553890 | Msa0222340:three_prime_UTR |
| AGGTCATAATCGTGACATTT+TGG | 0.184738 | 2_1:+71554070 | None:intergenic |
| GAAGAAATTTGACCGTATTT+TGG | 0.193189 | 2_1:-71555125 | Msa0222340:CDS |
| CGCCACCGCTTCATCGAAAA+AGG | 0.214541 | 2_1:-71557946 | Msa0222340:CDS |
| AAACATGCGAACCTGGAATT+TGG | 0.216594 | 2_1:+71558158 | None:intergenic |
| ATCCTTTCTTCCTCATTTCC+AGG | 0.254068 | 2_1:+71554479 | None:intergenic |
| ATCCTCTCTCTAGGGATATT+CGG | 0.262407 | 2_1:-71557836 | Msa0222340:CDS |
| TCTGAGTTGGAGCTAAATTA+TGG | 0.275758 | 2_1:-71556523 | Msa0222340:CDS |
| CTTCTCACGTTCCAAATTCC+AGG | 0.293879 | 2_1:-71558169 | Msa0222340:intron |
| AGAGCAGCTATTGGGAAGTT+TGG | 0.294434 | 2_1:-71554455 | Msa0222340:CDS |
| GGAGAAAGAAGCTGAAATTC+TGG | 0.295585 | 2_1:-71556209 | Msa0222340:CDS |
| CCCACCTGTTCTCCAGTTTG+TGG | 0.300584 | 2_1:-71554762 | Msa0222340:CDS |
| TGACGAGGAAAGGTTGAAAT+TGG | 0.301469 | 2_1:-71556230 | Msa0222340:CDS |
| AAGGAATACATTGCACGATT+TGG | 0.328195 | 2_1:-71554923 | Msa0222340:CDS |
| GATAGTGTTGCTAACGGAAT+TGG | 0.333903 | 2_1:-71557906 | Msa0222340:CDS |
| ATCAGGTGGCCCATGAGATA+TGG | 0.335843 | 2_1:-71554214 | Msa0222340:CDS |
| GGTGATTTGGTTCCTTTAGA+TGG | 0.339333 | 2_1:-71554608 | Msa0222340:CDS |
| GAAGCTTATGACAGGTGATT+TGG | 0.339539 | 2_1:-71554621 | Msa0222340:CDS |
| CCAACATGATACATTGATAA+TGG | 0.340708 | 2_1:-71553852 | Msa0222340:three_prime_UTR |
| TTCTTGTAGATGAGATTATC+AGG | 0.347827 | 2_1:+71554719 | None:intergenic |
| CAGATGGGAAGGTGATATTA+TGG | 0.351979 | 2_1:-71554168 | Msa0222340:CDS |
| TATTTGTGCAGACACCATTA+AGG | 0.358821 | 2_1:+71555077 | None:intergenic |
| CAGTTTGTGGAGGTGACATT+TGG | 0.361508 | 2_1:-71554749 | Msa0222340:CDS |
| GAATGGTTGGGTTCATAAAC+AGG | 0.363149 | 2_1:+71555905 | None:intergenic |
| TGAAGTGGCGATGAGGAGTT+AGG | 0.364830 | 2_1:+71558207 | None:intergenic |
| TTTGTTCCCATCCTCTCTCT+AGG | 0.366717 | 2_1:-71557845 | Msa0222340:CDS |
| CGTGCTCTTCCCAGCTCCAT+TGG | 0.366938 | 2_1:+71554649 | None:intergenic |
| TGTTCAGACACGTGCTGAAC+TGG | 0.372673 | 2_1:-71554999 | Msa0222340:CDS |
| TGCTTATCAATTTGGTTGCT+TGG | 0.375022 | 2_1:-71553882 | Msa0222340:three_prime_UTR |
| TCCTCTCTCTAGGGATATTC+GGG | 0.375863 | 2_1:-71557835 | Msa0222340:intron |
| GGGATACCAAGGTGATTTGT+AGG | 0.378062 | 2_1:+71555868 | None:intergenic |
| ATGGGATGGTGGCATGGTTC+TGG | 0.379571 | 2_1:-71554261 | Msa0222340:CDS |
| AGGTTTGGTTTGGTATATAG+AGG | 0.381908 | 2_1:+71558272 | None:intergenic |
| CTCTGACATGTCTGCGTTGG+AGG | 0.384118 | 2_1:-71556266 | Msa0222340:CDS |
| GTGCAATGCGAAGGTGATTA+TGG | 0.388699 | 2_1:+71554573 | None:intergenic |
| CCATCCGATAAATTTCTCAT+AGG | 0.393413 | 2_1:+71554407 | None:intergenic |
| ATAGTGTTGCTAACGGAATT+GGG | 0.394864 | 2_1:-71557905 | Msa0222340:CDS |
| TGTCAGAGGCTTCAATTTCC+CGG | 0.399457 | 2_1:+71556281 | None:intergenic |
| TCGATATCTAAATGATTAGT+TGG | 0.399920 | 2_1:+71554317 | None:intergenic |
| ATTGTAGTACTTGTTTCCTC+TGG | 0.408831 | 2_1:-71553792 | Msa0222340:three_prime_UTR |
| GAAAGGATGAGAGCAGCTAT+TGG | 0.409176 | 2_1:-71554464 | Msa0222340:CDS |
| TTTGTTGAGGTGGTAAGGTT+TGG | 0.410913 | 2_1:+71558257 | None:intergenic |
| TCTACGCTACTTACAGCAAT+AGG | 0.411200 | 2_1:-71556352 | Msa0222340:CDS |
| GTGAATATAATCAAATGAAA+TGG | 0.414753 | 2_1:-71553993 | Msa0222340:three_prime_UTR |
| CTGGTTGGACCCAATGGAGC+TGG | 0.414943 | 2_1:-71554659 | Msa0222340:CDS |
| TCTACAAGAACATTGACTTC+GGG | 0.415122 | 2_1:-71554706 | Msa0222340:CDS |
| ACCTCCACAAACTGGAGAAC+AGG | 0.416071 | 2_1:+71554758 | None:intergenic |
| TTCAGACGTTATGGTTTGCT+TGG | 0.417788 | 2_1:-71556394 | Msa0222340:intron |
| CATAATATCACCTTCCCATC+TGG | 0.420837 | 2_1:+71554169 | None:intergenic |
| ATATCCATGTGGTCTGGAAT+AGG | 0.420995 | 2_1:+71556316 | None:intergenic |
| AGACACCATTAAGGAAATCT+TGG | 0.427382 | 2_1:+71555086 | None:intergenic |
| GATGCCTATGAGAAATTTAT+CGG | 0.431894 | 2_1:-71554411 | Msa0222340:CDS |
| TGGATATTTATCACCTTAGC+CGG | 0.433721 | 2_1:-71556300 | Msa0222340:CDS |
| TGAGGTGGTAAGGTTTGGTT+TGG | 0.434893 | 2_1:+71558262 | None:intergenic |
| CCCACCTGTACTGCTTCATC+TGG | 0.435159 | 2_1:+71554969 | None:intergenic |
| AATCACCTGTCATAAGCTTC+AGG | 0.435857 | 2_1:+71554624 | None:intergenic |
| ATTGGGAAGTTTGGATTGTC+GGG | 0.439397 | 2_1:-71554446 | Msa0222340:CDS |
| GGGTCCAACCAGAGCAATCC+TGG | 0.440264 | 2_1:+71554670 | None:intergenic |
| ATGACCTTGTATTACAATGT+AGG | 0.448368 | 2_1:-71554054 | Msa0222340:three_prime_UTR |
| TCTTTATCAGTTACTTTCCA+TGG | 0.449572 | 2_1:-71556565 | Msa0222340:CDS |
| TCCTTTCTTCCTCATTTCCA+GGG | 0.450321 | 2_1:+71554480 | None:intergenic |
| GACTCCAGGATTGCTCTGGT+TGG | 0.450992 | 2_1:-71554674 | Msa0222340:CDS |
| CAAATGTCACCTCCACAAAC+TGG | 0.453285 | 2_1:+71554750 | None:intergenic |
| CTTGAGGTGGATTTCTCTCA+TGG | 0.456181 | 2_1:-71554015 | Msa0222340:three_prime_UTR |
| GGATTTCAAGCTGCACCTAA+AGG | 0.456483 | 2_1:-71554147 | Msa0222340:CDS |
| TATTGGGAAGTTTGGATTGT+CGG | 0.456601 | 2_1:-71554447 | Msa0222340:CDS |
| TAGCCGAGGCATTGAATGAA+TGG | 0.457369 | 2_1:-71554280 | Msa0222340:CDS |
| AAAGGATGAGAGCAGCTATT+GGG | 0.460692 | 2_1:-71554463 | Msa0222340:CDS |
| TTTCTGGTGGATGGAGAATG+AGG | 0.462028 | 2_1:-71555945 | Msa0222340:CDS |
| CAGCAAGTGAGGCTGTCTAT+AGG | 0.465288 | 2_1:+71554352 | None:intergenic |
| TTGTTCCCATCCTCTCTCTA+GGG | 0.465863 | 2_1:-71557844 | Msa0222340:CDS |
| ACCCTGGAAATGAGGAAGAA+AGG | 0.466407 | 2_1:-71554481 | Msa0222340:CDS |
| GTGCTCTTCCCAGCTCCATT+GGG | 0.466440 | 2_1:+71554650 | None:intergenic |
| GAGAAAGAAGCTGAAATTCT+GGG | 0.473580 | 2_1:-71556208 | Msa0222340:CDS |
| TTTGGTTCCTTTAGATGGCA+TGG | 0.476128 | 2_1:-71554603 | Msa0222340:CDS |
| TCAGGTGGCCCATGAGATAT+GGG | 0.476686 | 2_1:-71554213 | Msa0222340:CDS |
| AGGCTTCAATTTCCCGGCTA+AGG | 0.478428 | 2_1:+71556287 | None:intergenic |
| TGATAAATATCCATGTGGTC+TGG | 0.478691 | 2_1:+71556310 | None:intergenic |
| TCTTCTCTTTACTCTGAGCT+TGG | 0.478713 | 2_1:+71554876 | None:intergenic |
| AGCTGAAATTCTGGGAGCAC+AGG | 0.481031 | 2_1:-71556200 | Msa0222340:intron |
| TTTAGACTCCAGGATTGCTC+TGG | 0.486928 | 2_1:-71554678 | Msa0222340:CDS |
| CAAGCTGCACCTAAAGGAAA+AGG | 0.496432 | 2_1:-71554141 | Msa0222340:CDS |
| TCGGGGTCGATTTAGACTCC+AGG | 0.496794 | 2_1:-71554688 | Msa0222340:CDS |
| TTTGGAAGCATGTGTGTGGC+TGG | 0.497037 | 2_1:-71555158 | Msa0222340:CDS |
| TGGTTTCAACAAGCAGATGC+AGG | 0.504046 | 2_1:-71555986 | Msa0222340:CDS |
| AGAACCAGATGAAGCAGTAC+AGG | 0.507231 | 2_1:-71554973 | Msa0222340:CDS |
| GAATATCCCTAGAGAGAGGA+TGG | 0.511159 | 2_1:+71557838 | None:intergenic |
| GAGATATTAGGAATTGAAGA+TGG | 0.511577 | 2_1:-71558042 | Msa0222340:exon |
| TTGCTTGGATTGAACGGCTG+TGG | 0.511780 | 2_1:-71556379 | Msa0222340:CDS |
| ATTGCTCTGGTTGGACCCAA+TGG | 0.513877 | 2_1:-71554665 | Msa0222340:CDS |
| TCATTAGTTGTGACGAGGAA+AGG | 0.515894 | 2_1:-71556240 | Msa0222340:CDS |
| CGACGAACCATGCCATCTAA+AGG | 0.517489 | 2_1:+71554596 | None:intergenic |
| GTGAAATCACAACCAAAATA+CGG | 0.518081 | 2_1:+71555113 | None:intergenic |
| AGGTTCATCAAGTAGAAGAA+TGG | 0.518332 | 2_1:+71555888 | None:intergenic |
| AAAGGCTTCGGAGAAGGCGG+TGG | 0.518552 | 2_1:-71557928 | Msa0222340:CDS |
| GACACCATTAAGGAAATCTT+GGG | 0.522650 | 2_1:+71555087 | None:intergenic |
| TCTAATAGTTGATTCTGAGT+TGG | 0.522759 | 2_1:-71556536 | Msa0222340:CDS |
| CCCTCCTCTCTTTGCAGCGG+CGG | 0.522773 | 2_1:+71557977 | None:intergenic |
| ATCCCATTCATTCAATGCCT+CGG | 0.523753 | 2_1:+71554277 | None:intergenic |
| GAAATATTACCTACCTCTGA+AGG | 0.526085 | 2_1:+71556708 | None:intergenic |
| GAAGCAGTACAGGTGGGAGC+AGG | 0.526521 | 2_1:-71554963 | Msa0222340:CDS |
| TGGATTGTCGGGTAAAGCAC+AGG | 0.529724 | 2_1:-71554435 | Msa0222340:CDS |
| AGCCGAGGCATTGAATGAAT+GGG | 0.531518 | 2_1:-71554279 | Msa0222340:CDS |
| TTATTTATGTTCCAGGAGGA+TGG | 0.532051 | 2_1:-71556102 | Msa0222340:intron |
| TCATCAAGTAGAAGAATGGT+TGG | 0.533303 | 2_1:+71555892 | None:intergenic |
| GCGGGTTTATCTGACTGAAA+AGG | 0.536897 | 2_1:-71554119 | Msa0222340:exon |
| GAATTTGGAACGTGAGAAGA+AGG | 0.537560 | 2_1:+71558173 | None:intergenic |
| CAGCACACACCCATATCTCA+TGG | 0.540856 | 2_1:+71554204 | None:intergenic |
| GCCGCCGCTGCAAAGAGAGG+AGG | 0.541617 | 2_1:-71557978 | Msa0222340:CDS |
| ATCTACAAGAACATTGACTT+CGG | 0.541734 | 2_1:-71554707 | Msa0222340:CDS |
| AACAAATATTACAGAGGTGA+CGG | 0.543594 | 2_1:+71553920 | None:intergenic |
| AGCCTCTGACATGTCTGCGT+TGG | 0.547223 | 2_1:-71556269 | Msa0222340:CDS |
| CAACTATTAGATCATGTCCA+TGG | 0.547850 | 2_1:+71556548 | None:intergenic |
| AAAAGAGTACCCTGGAAATG+AGG | 0.547885 | 2_1:-71554489 | Msa0222340:CDS |
| TATGGTTTGCTTGGATTGAA+CGG | 0.549563 | 2_1:-71556385 | Msa0222340:CDS |
| ACCTGTTCTCCAGTTTGTGG+AGG | 0.551730 | 2_1:-71554759 | Msa0222340:CDS |
| CATCAAGTAGAAGAATGGTT+GGG | 0.553770 | 2_1:+71555893 | None:intergenic |
| GCTGCCGCCGCTGCAAAGAG+AGG | 0.556803 | 2_1:-71557981 | Msa0222340:CDS |
| ATATCTGATCGGACATGCAC+GGG | 0.557255 | 2_1:-71557873 | Msa0222340:CDS |
| GGAGCAGATTGCCTCAATGA+AGG | 0.557274 | 2_1:-71554942 | Msa0222340:CDS |
| TGGTTGGACCCAATGGAGCT+GGG | 0.558985 | 2_1:-71554658 | Msa0222340:CDS |
| TGCAATGTATTCCTTCATTG+AGG | 0.559633 | 2_1:+71554931 | None:intergenic |
| CGCTGCAAAGAGAGGAGGGA+AGG | 0.560162 | 2_1:-71557973 | Msa0222340:CDS |
| CCATTATCAATGTATCATGT+TGG | 0.560306 | 2_1:+71553852 | None:intergenic |
| GTGTTGCTAGCTGCTTGAGG+TGG | 0.560811 | 2_1:-71554028 | Msa0222340:three_prime_UTR |
| CCAACCTACATTGTAATACA+AGG | 0.560880 | 2_1:+71554050 | None:intergenic |
| CCGCCGCTGCAAAGAGAGGA+GGG | 0.562371 | 2_1:-71557977 | Msa0222340:CDS |
| AGTTGGAGCTAAATTATGGA+AGG | 0.564374 | 2_1:-71556519 | Msa0222340:intron |
| ACCAGATGAAGCAGTACAGG+TGG | 0.568916 | 2_1:-71554970 | Msa0222340:CDS |
| ACGTTCCTGAAGCTTATGAC+AGG | 0.572055 | 2_1:-71554629 | Msa0222340:CDS |
| CTGATCAAACAGTGACCAGA+TGG | 0.574106 | 2_1:-71554184 | Msa0222340:CDS |
| CCTATGAGAAATTTATCGGA+TGG | 0.574573 | 2_1:-71554407 | Msa0222340:CDS |
| GGATATTTATCACCTTAGCC+GGG | 0.580006 | 2_1:-71556299 | Msa0222340:CDS |
| GATATCTGATCGGACATGCA+CGG | 0.582650 | 2_1:-71557874 | Msa0222340:CDS |
| CACAAACTGGAGAACAGGTG+GGG | 0.584349 | 2_1:+71554763 | None:intergenic |
| TCCACAAACTGGAGAACAGG+TGG | 0.586563 | 2_1:+71554761 | None:intergenic |
| ATGTTCCAGGAGGATGGTGG+TGG | 0.591374 | 2_1:-71556096 | Msa0222340:intron |
| TACATTGCACGATTTGGCCA+TGG | 0.600697 | 2_1:-71554917 | Msa0222340:CDS |
| TTTATGTTCCAGGAGGATGG+TGG | 0.602285 | 2_1:-71556099 | Msa0222340:intron |
| TCTGTTTATGAATCCTTCAG+AGG | 0.604197 | 2_1:-71556721 | Msa0222340:intron |
| CCACAAACTGGAGAACAGGT+GGG | 0.611917 | 2_1:+71554762 | None:intergenic |
| CTTCCCTCCTCTCTTTGCAG+CGG | 0.612014 | 2_1:+71557974 | None:intergenic |
| GAATGAATGGGATGGTGGCA+TGG | 0.612616 | 2_1:-71554267 | Msa0222340:CDS |
| CTGCACCTAAAGGAAAAGGC+GGG | 0.612988 | 2_1:-71554137 | Msa0222340:CDS |
| GAAATTTATCGGATGGACAA+AGG | 0.614374 | 2_1:-71554400 | Msa0222340:CDS |
| CCTTGTATTACAATGTAGGT+TGG | 0.614457 | 2_1:-71554050 | Msa0222340:three_prime_UTR |
| TCATCTAATAGCAGCAAGTG+AGG | 0.614956 | 2_1:+71554341 | None:intergenic |
| GCGCGGTGGACTTACAGAGA+AGG | 0.616834 | 2_1:-71554837 | Msa0222340:CDS |
| TAGATTTGGAAGCATGTGTG+TGG | 0.617264 | 2_1:-71555162 | Msa0222340:CDS |
| TAGTGTTGCTAACGGAATTG+GGG | 0.617899 | 2_1:-71557904 | Msa0222340:CDS |
| ATAAAGAGTAAAGGAGCCAG+AGG | 0.619651 | 2_1:+71553776 | None:intergenic |
| GAATCAGACATAGAAATCAC+CGG | 0.620043 | 2_1:-71553969 | Msa0222340:three_prime_UTR |
| TTGGTGTTGCTAGCTGCTTG+AGG | 0.622629 | 2_1:-71554031 | Msa0222340:three_prime_UTR |
| GCTTCCTATTCCAGACCACA+TGG | 0.623990 | 2_1:-71556320 | Msa0222340:CDS |
| GCTGCACCTAAAGGAAAAGG+CGG | 0.625202 | 2_1:-71554138 | Msa0222340:CDS |
| AAGGTATAGATCTTGTGAAG+TGG | 0.626321 | 2_1:+71558192 | None:intergenic |
| ACAAACTGGAGAACAGGTGG+GGG | 0.628419 | 2_1:+71554764 | None:intergenic |
| AGCACACACCCATATCTCAT+GGG | 0.630239 | 2_1:+71554205 | None:intergenic |
| CAAACAGTGACCAGATGGGA+AGG | 0.631024 | 2_1:-71554179 | Msa0222340:CDS |
| AATATCCCTAGAGAGAGGAT+GGG | 0.634635 | 2_1:+71557839 | None:intergenic |
| GACAATTGACTCGTTAGCCG+AGG | 0.636847 | 2_1:-71554294 | Msa0222340:CDS |
| CGGTGGACTTACAGAGAAGG+TGG | 0.640373 | 2_1:-71554834 | Msa0222340:CDS |
| GGGATATTCAGATATCTGAT+CGG | 0.640506 | 2_1:-71557884 | Msa0222340:CDS |
| GATGAACCTACAAATCACCT+TGG | 0.641091 | 2_1:-71555874 | Msa0222340:intron |
| GGAGTCGCGTGATCTTTGCA+TGG | 0.644084 | 2_1:-71554379 | Msa0222340:CDS |
| GGTGAAATTGTGCAATGCGA+AGG | 0.646343 | 2_1:+71554564 | None:intergenic |
| TGATCAAACAGTGACCAGAT+GGG | 0.653848 | 2_1:-71554183 | Msa0222340:CDS |
| CTACAAGAACATTGACTTCG+GGG | 0.653950 | 2_1:-71554705 | Msa0222340:CDS |
| GGCTGTCATTAGTTGTGACG+AGG | 0.658773 | 2_1:-71556245 | Msa0222340:CDS |
| CCAGATGAAGCAGTACAGGT+GGG | 0.659061 | 2_1:-71554969 | Msa0222340:CDS |
| GCGGTGGATAGTGTTGCTAA+CGG | 0.662681 | 2_1:-71557912 | Msa0222340:CDS |
| AAGGCAGCGTCTGTGATGCG+CGG | 0.666375 | 2_1:-71554100 | Msa0222340:three_prime_UTR |
| ACCCGAATATCCCTAGAGAG+AGG | 0.667222 | 2_1:+71557834 | None:intergenic |
| GATCTTGTGAAGTGGCGATG+AGG | 0.671338 | 2_1:+71558200 | None:intergenic |
| CTCCAACGCAGACATGTCAG+AGG | 0.671580 | 2_1:+71556267 | None:intergenic |
| GCATTGAATGAATGGGATGG+TGG | 0.687430 | 2_1:-71554272 | Msa0222340:CDS |
| TTTATGATAAAAGAGTACCC+TGG | 0.697631 | 2_1:-71554497 | Msa0222340:CDS |
| GAGGCATTGAATGAATGGGA+TGG | 0.699572 | 2_1:-71554275 | Msa0222340:CDS |
| GGAAGCATGTGTGTGGCTGG+AGG | 0.706083 | 2_1:-71555155 | Msa0222340:CDS |
| AATGGTTGGGTTCATAAACA+GGG | 0.707136 | 2_1:+71555906 | None:intergenic |
| TAAGGTGATAAATATCCATG+TGG | 0.717137 | 2_1:+71556305 | None:intergenic |
| GGTCTGGAATAGGAAGCTCA+CGG | 0.726335 | 2_1:+71556326 | None:intergenic |
| GTTTCCCCACATCAACAAAG+CGG | 0.731629 | 2_1:+71554789 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTTAATTAATTGTTATT+CGG | - | chr2_1:71554337-71554356 | Msa0222340:CDS | 10.0% |
| !! | ATAATAAATATTTGTAGATT+TGG | - | chr2_1:71556925-71556944 | Msa0222340:intron | 10.0% |
| !!! | GTTATTGATTAGTTTAATTT+TGG | - | chr2_1:71554307-71554326 | Msa0222340:CDS | 15.0% |
| !!! | AAAAAAACTAACACAATTTT+TGG | + | chr2_1:71554578-71554597 | None:intergenic | 15.0% |
| !!! | GACTTTTATTAACAAAATTA+CGG | - | chr2_1:71554644-71554663 | Msa0222340:CDS | 15.0% |
| !!! | ACTTTTATTAACAAAATTAC+GGG | - | chr2_1:71554645-71554664 | Msa0222340:CDS | 15.0% |
| !!! | TCAAAATCAATTTTTGTATT+AGG | - | chr2_1:71555014-71555033 | Msa0222340:CDS | 15.0% |
| !! | TAATAATTAATTGAGAATCT+GGG | + | chr2_1:71555199-71555218 | None:intergenic | 15.0% |
| !! | TTAATAATTAATTGAGAATC+TGG | + | chr2_1:71555200-71555219 | None:intergenic | 15.0% |
| !!! | AATTATTAATCCCATATTTT+CGG | - | chr2_1:71555211-71555230 | Msa0222340:intron | 15.0% |
| !! | TTCAATATTGAACAATAAAA+AGG | - | chr2_1:71555413-71555432 | Msa0222340:intron | 15.0% |
| !! | GACAATTAAATGTATTTATA+TGG | + | chr2_1:71555448-71555467 | None:intergenic | 15.0% |
| !! | TTTCTTACTATAATATTTGT+TGG | - | chr2_1:71555660-71555679 | Msa0222340:intron | 15.0% |
| !!! | TACATTAACATCTAATTTTA+TGG | - | chr2_1:71556678-71556697 | Msa0222340:intron | 15.0% |
| !! | ATTAAAAACAAATATTACAG+AGG | + | chr2_1:71558190-71558209 | None:intergenic | 15.0% |
| !! | TTTGTTCTTTATGTTATGTA+TGG | - | chr2_1:71554377-71554396 | Msa0222340:CDS | 20.0% |
| !!! | AAAGAGAAGCTTTTTTTTTT+TGG | + | chr2_1:71554779-71554798 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGCTTCTCTTTTA+AGG | - | chr2_1:71554781-71554800 | Msa0222340:CDS | 20.0% |
| !!! | ACACTTCAAATTATTTTTCA+TGG | + | chr2_1:71554989-71555008 | None:intergenic | 20.0% |
| !! | AGAATTATGTTGAAATTTGA+AGG | + | chr2_1:71555079-71555098 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTGAAAATGATC+TGG | - | chr2_1:71555107-71555126 | Msa0222340:CDS | 20.0% |
| !! | TAAGTCAGAAGATATAAATA+TGG | + | chr2_1:71555623-71555642 | None:intergenic | 20.0% |
| !! | GAACATAAATAAATAAAGTG+TGG | + | chr2_1:71555991-71556010 | None:intergenic | 20.0% |
| !!! | ACTTTATTTATTTATGTTCC+AGG | - | chr2_1:71555992-71556011 | Msa0222340:CDS | 20.0% |
| !!! | ATTAACATCTAATTTTATGG+AGG | - | chr2_1:71556681-71556700 | Msa0222340:intron | 20.0% |
| !! | GTGAATATAATCAAATGAAA+TGG | - | chr2_1:71558108-71558127 | Msa0222340:intron | 20.0% |
| !! | ATTTATGATGCTTATCAATT+TGG | - | chr2_1:71558211-71558230 | Msa0222340:five_prime_UTR | 20.0% |
| !!! | AGAGTGATTTTAGAGATATT+AGG | - | chr2_1:71554047-71554066 | Msa0222340:three_prime_UTR | 25.0% |
| ! | TCTATGACTTGAGTTTATAA+AGG | + | chr2_1:71554626-71554645 | None:intergenic | 25.0% |
| !!! | GAAGCTTTTTTTTTTTGGAA+TGG | + | chr2_1:71554774-71554793 | None:intergenic | 25.0% |
| !! | ACTGTTTTCATAATCTATTC+TGG | - | chr2_1:71554809-71554828 | Msa0222340:CDS | 25.0% |
| ! | CAGTCATAATAATCAGAATT+AGG | + | chr2_1:71554958-71554977 | None:intergenic | 25.0% |
| ! | TTTCAACATAATTCTTGTCT+TGG | - | chr2_1:71555084-71555103 | Msa0222340:CDS | 25.0% |
| !!! | ATAAACAGAGATTTTGACAT+GGG | + | chr2_1:71555369-71555388 | None:intergenic | 25.0% |
| !! | GTTGTATTCTATTGACATTT+TGG | - | chr2_1:71555489-71555508 | Msa0222340:intron | 25.0% |
| ! | ATATCTTCTGACTTATGAAT+AGG | - | chr2_1:71555628-71555647 | Msa0222340:intron | 25.0% |
| !!! | TAACTTATTTTCAGACGTTA+TGG | - | chr2_1:71555698-71555717 | Msa0222340:intron | 25.0% |
| ! | TTATTTATTTATGTTCCAGG+AGG | - | chr2_1:71555995-71556014 | Msa0222340:CDS | 25.0% |
| !! | AATGAAAGAGTTACTCTTTT+CGG | + | chr2_1:71556265-71556284 | None:intergenic | 25.0% |
| !!! | TTTTTTAATTGAAGGTCACA+TGG | - | chr2_1:71556367-71556386 | Msa0222340:CDS | 25.0% |
| !!! | TTTTTAATTGAAGGTCACAT+GGG | - | chr2_1:71556368-71556387 | Msa0222340:CDS | 25.0% |
| ! | GTATGCTTTGATAAAACATT+TGG | - | chr2_1:71556513-71556532 | Msa0222340:intron | 25.0% |
| !! | AAAGCATCATCATAACTAAA+AGG | + | chr2_1:71556764-71556783 | None:intergenic | 25.0% |
| ! | TCAGACTAAATTCAATGTAT+TGG | - | chr2_1:71556783-71556802 | Msa0222340:intron | 25.0% |
| ! | AAAACATTGCAAGATATGAA+GGG | + | chr2_1:71556821-71556840 | None:intergenic | 25.0% |
| ! | AAAAACATTGCAAGATATGA+AGG | + | chr2_1:71556822-71556841 | None:intergenic | 25.0% |
| ! | TCGATATCTAAATGATTAGT+TGG | + | chr2_1:71557787-71557806 | None:intergenic | 25.0% |
| ! | AGCTCAAAAAATAATTAAGC+CGG | + | chr2_1:71558154-71558173 | None:intergenic | 25.0% |
| TTTCAACTTAACGATCATGT+AGG | + | chr2_1:71554011-71554030 | None:intergenic | 30.0% | |
| GAGATATTAGGAATTGAAGA+TGG | - | chr2_1:71554059-71554078 | Msa0222340:three_prime_UTR | 30.0% | |
| !! | TGGATGATTAGTTCTTTTGT+AGG | - | chr2_1:71554397-71554416 | Msa0222340:CDS | 30.0% |
| !! | GGATGATTAGTTCTTTTGTA+GGG | - | chr2_1:71554398-71554417 | Msa0222340:CDS | 30.0% |
| ! | AACAATGAACAGAGTTGATT+TGG | - | chr2_1:71554468-71554487 | Msa0222340:CDS | 30.0% |
| !!! | AATTTTTGGTGCTGAAAAAC+GGG | + | chr2_1:71554564-71554583 | None:intergenic | 30.0% |
| !!! | CAATTTTTGGTGCTGAAAAA+CGG | + | chr2_1:71554565-71554584 | None:intergenic | 30.0% |
| TAAGTGCTTATGCTATAATC+TGG | + | chr2_1:71554694-71554713 | None:intergenic | 30.0% | |
| TTTCATAAGTACTTACCGAA+CGG | - | chr2_1:71554859-71554878 | Msa0222340:CDS | 30.0% | |
| GTTTGAAAAATTACCACCAA+GGG | + | chr2_1:71554936-71554955 | None:intergenic | 30.0% | |
| CATATATTGCATTGTATCTC+TGG | - | chr2_1:71555147-71555166 | Msa0222340:CDS | 30.0% | |
| TAAATTATTGTAGCTAGCGT+GGG | - | chr2_1:71555277-71555296 | Msa0222340:intron | 30.0% | |
| !! | CATAAACAGAGATTTTGACA+TGG | + | chr2_1:71555370-71555389 | None:intergenic | 30.0% |
| ! | TCTTTATCAGTTACTTTCCA+TGG | - | chr2_1:71555536-71555555 | Msa0222340:intron | 30.0% |
| ! | TCTAATAGTTGATTCTGAGT+TGG | - | chr2_1:71555565-71555584 | Msa0222340:intron | 30.0% |
| TAAGGTGATAAATATCCATG+TGG | + | chr2_1:71555799-71555818 | None:intergenic | 30.0% | |
| !! | GCTGAAATTTTATTTGGTCT+TGG | - | chr2_1:71556095-71556114 | Msa0222340:intron | 30.0% |
| ! | ATGAAAGAGTTACTCTTTTC+GGG | + | chr2_1:71556264-71556283 | None:intergenic | 30.0% |
| TCAATGCATAAAACATGACA+AGG | + | chr2_1:71556310-71556329 | None:intergenic | 30.0% | |
| !!! | GACTCGTGTTTTTTAATTGA+AGG | - | chr2_1:71556359-71556378 | Msa0222340:CDS | 30.0% |
| ATCCATGTCTTATACTTGAT+AGG | + | chr2_1:71556419-71556438 | None:intergenic | 30.0% | |
| !! | TGCTTTGAGTAAAGTTTTCT+TGG | - | chr2_1:71556489-71556508 | Msa0222340:intron | 30.0% |
| TTTGATGCTTTGTATCATCA+TGG | - | chr2_1:71556567-71556586 | Msa0222340:CDS | 30.0% | |
| TTGATGCTTTGTATCATCAT+GGG | - | chr2_1:71556568-71556587 | Msa0222340:CDS | 30.0% | |
| AAATAGAAGATGCAAGTGAA+TGG | + | chr2_1:71556624-71556643 | None:intergenic | 30.0% | |
| ! | ATATAGTCTTGGGTAGTTAT+CGG | - | chr2_1:71556733-71556752 | Msa0222340:CDS | 30.0% |
| TGTCCTTATAGTCTAATCTT+TGG | - | chr2_1:71556864-71556883 | Msa0222340:intron | 30.0% | |
| ! | GAAGAAATTTGACCGTATTT+TGG | - | chr2_1:71556976-71556995 | Msa0222340:intron | 30.0% |
| GTGAAATCACAACCAAAATA+CGG | + | chr2_1:71556991-71557010 | None:intergenic | 30.0% | |
| AAAAAGCTGAAGTTCTATAC+TGG | - | chr2_1:71557064-71557083 | Msa0222340:intron | 30.0% | |
| TTCTTGTAGATGAGATTATC+AGG | + | chr2_1:71557385-71557404 | None:intergenic | 30.0% | |
| !! | ATCTACAAGAACATTGACTT+CGG | - | chr2_1:71557394-71557413 | Msa0222340:intron | 30.0% |
| ! | GGTACTCTTTTATCATAAAC+TGG | + | chr2_1:71557603-71557622 | None:intergenic | 30.0% |
| !! | TTTATGATAAAAGAGTACCC+TGG | - | chr2_1:71557604-71557623 | Msa0222340:intron | 30.0% |
| GATGCCTATGAGAAATTTAT+CGG | - | chr2_1:71557690-71557709 | Msa0222340:intron | 30.0% | |
| !! | TTCTGGTTAGTCATGATTTT+AGG | - | chr2_1:71557857-71557876 | Msa0222340:CDS | 30.0% |
| ! | TGATTTTAGGCTCATAAATC+AGG | - | chr2_1:71557870-71557889 | Msa0222340:CDS | 30.0% |
| ATGACCTTGTATTACAATGT+AGG | - | chr2_1:71558047-71558066 | Msa0222340:five_prime_UTR | 30.0% | |
| AACAAATATTACAGAGGTGA+CGG | + | chr2_1:71558184-71558203 | None:intergenic | 30.0% | |
| CCATTATCAATGTATCATGT+TGG | + | chr2_1:71558252-71558271 | None:intergenic | 30.0% | |
| CCAACATGATACATTGATAA+TGG | - | chr2_1:71558249-71558268 | Msa0222340:five_prime_UTR | 30.0% | |
| !! | AGGTTTGGTTTGGTATATAG+AGG | + | chr2_1:71553832-71553851 | None:intergenic | 35.0% |
| !! | TTTCTTCGTTTTTGTTGAGG+TGG | + | chr2_1:71553857-71553876 | None:intergenic | 35.0% |
| !! | CGATTTCTTCGTTTTTGTTG+AGG | + | chr2_1:71553860-71553879 | None:intergenic | 35.0% |
| AAGGTATAGATCTTGTGAAG+TGG | + | chr2_1:71553912-71553931 | None:intergenic | 35.0% | |
| !! | ATCTCTAAAATCACTCTGCA+TGG | + | chr2_1:71554044-71554063 | None:intergenic | 35.0% |
| ! | ATAGTGTTGCTAACGGAATT+GGG | - | chr2_1:71554196-71554215 | Msa0222340:CDS | 35.0% |
| GGGATATTCAGATATCTGAT+CGG | - | chr2_1:71554217-71554236 | Msa0222340:CDS | 35.0% | |
| ! | TCCGAAGAGTGAAATCATTT+TGG | - | chr2_1:71554515-71554534 | Msa0222340:CDS | 35.0% |
| GCCAAAATGATTTCACTCTT+CGG | + | chr2_1:71554519-71554538 | None:intergenic | 35.0% | |
| GCGTTACATTTATCCAATCA+GGG | + | chr2_1:71554541-71554560 | None:intergenic | 35.0% | |
| !!! | ATTTTTGGTGCTGAAAAACG+GGG | + | chr2_1:71554563-71554582 | None:intergenic | 35.0% |
| TTCATAAGTACTTACCGAAC+GGG | - | chr2_1:71554860-71554879 | Msa0222340:CDS | 35.0% | |
| TAAGCACTTATAAACCCGTT+CGG | + | chr2_1:71554877-71554896 | None:intergenic | 35.0% | |
| GGTTTGAAAAATTACCACCA+AGG | + | chr2_1:71554937-71554956 | None:intergenic | 35.0% | |
| GTTGAAATTTGAAGGACACA+AGG | + | chr2_1:71555071-71555090 | None:intergenic | 35.0% | |
| TCTGGAAAAAAAGAGAGAAC+TGG | - | chr2_1:71555165-71555184 | Msa0222340:intron | 35.0% | |
| CTAAATTATTGTAGCTAGCG+TGG | - | chr2_1:71555276-71555295 | Msa0222340:intron | 35.0% | |
| TCTGTTTATGAATCCTTCAG+AGG | - | chr2_1:71555380-71555399 | Msa0222340:intron | 35.0% | |
| TTTATGAATCCTTCAGAGGT+AGG | - | chr2_1:71555384-71555403 | Msa0222340:intron | 35.0% | |
| GAAATATTACCTACCTCTGA+AGG | + | chr2_1:71555396-71555415 | None:intergenic | 35.0% | |
| CAACTATTAGATCATGTCCA+TGG | + | chr2_1:71555556-71555575 | None:intergenic | 35.0% | |
| ! | TCTGAGTTGGAGCTAAATTA+TGG | - | chr2_1:71555578-71555597 | Msa0222340:intron | 35.0% |
| AGTTGGAGCTAAATTATGGA+AGG | - | chr2_1:71555582-71555601 | Msa0222340:intron | 35.0% | |
| !! | TATGGTTTGCTTGGATTGAA+CGG | - | chr2_1:71555716-71555735 | Msa0222340:intron | 35.0% |
| TGATAAATATCCATGTGGTC+TGG | + | chr2_1:71555794-71555813 | None:intergenic | 35.0% | |
| TGGATATTTATCACCTTAGC+CGG | - | chr2_1:71555801-71555820 | Msa0222340:intron | 35.0% | |
| GAGAAAGAAGCTGAAATTCT+GGG | - | chr2_1:71555893-71555912 | Msa0222340:CDS | 35.0% | |
| CCGTAAAAGCAAAACAACTT+GGG | + | chr2_1:71555962-71555981 | None:intergenic | 35.0% | |
| !! | CCCAAGTTGTTTTGCTTTTA+CGG | - | chr2_1:71555959-71555978 | Msa0222340:CDS | 35.0% |
| TCCGTAAAAGCAAAACAACT+TGG | + | chr2_1:71555963-71555982 | None:intergenic | 35.0% | |
| TTATTTATGTTCCAGGAGGA+TGG | - | chr2_1:71555999-71556018 | Msa0222340:CDS | 35.0% | |
| ! | CACTTGAACGAGTTTTTGAA+CGG | - | chr2_1:71556033-71556052 | Msa0222340:CDS | 35.0% |
| !! | CGTGCTGCTGAAATTTTATT+TGG | - | chr2_1:71556089-71556108 | Msa0222340:CDS | 35.0% |
| ! | AAGAAGACACGTGATTTTTC+TGG | - | chr2_1:71556140-71556159 | Msa0222340:intron | 35.0% |
| AATGGTTGGGTTCATAAACA+GGG | + | chr2_1:71556198-71556217 | None:intergenic | 35.0% | |
| CATCAAGTAGAAGAATGGTT+GGG | + | chr2_1:71556211-71556230 | None:intergenic | 35.0% | |
| TCATCAAGTAGAAGAATGGT+TGG | + | chr2_1:71556212-71556231 | None:intergenic | 35.0% | |
| AGGTTCATCAAGTAGAAGAA+TGG | + | chr2_1:71556216-71556235 | None:intergenic | 35.0% | |
| ! | TGAAAGAGTTACTCTTTTCG+GGG | + | chr2_1:71556263-71556282 | None:intergenic | 35.0% |
| TGCCTATCAAGTATAAGACA+TGG | - | chr2_1:71556414-71556433 | Msa0222340:intron | 35.0% | |
| CGAACAAACTAGAACTAGAA+GGG | + | chr2_1:71556451-71556470 | None:intergenic | 35.0% | |
| ACGAACAAACTAGAACTAGA+AGG | + | chr2_1:71556452-71556471 | None:intergenic | 35.0% | |
| !! | TCTAGTTCTAGTTTGTTCGT+TGG | - | chr2_1:71556452-71556471 | Msa0222340:intron | 35.0% |
| !! | CTAGTTCTAGTTTGTTCGTT+GGG | - | chr2_1:71556453-71556472 | Msa0222340:intron | 35.0% |
| CTTTACTCAAAGCAACATAG+AGG | + | chr2_1:71556483-71556502 | None:intergenic | 35.0% | |
| GCTTTGATAAAACATTTGGC+AGG | - | chr2_1:71556517-71556536 | Msa0222340:intron | 35.0% | |
| TTCGTACTCTGATATAGTCT+TGG | - | chr2_1:71556722-71556741 | Msa0222340:CDS | 35.0% | |
| TCGTACTCTGATATAGTCTT+GGG | - | chr2_1:71556723-71556742 | Msa0222340:CDS | 35.0% | |
| CGACCAAAGATTAGACTATA+AGG | + | chr2_1:71556870-71556889 | None:intergenic | 35.0% | |
| TTTGGTCGTATATCATAGCT+GGG | - | chr2_1:71556882-71556901 | Msa0222340:intron | 35.0% | |
| GACACCATTAAGGAAATCTT+GGG | + | chr2_1:71557017-71557036 | None:intergenic | 35.0% | |
| AGACACCATTAAGGAAATCT+TGG | + | chr2_1:71557018-71557037 | None:intergenic | 35.0% | |
| TATTTGTGCAGACACCATTA+AGG | + | chr2_1:71557027-71557046 | None:intergenic | 35.0% | |
| !!! | TCAGCTTTTTGTTTTGCATG+TGG | + | chr2_1:71557054-71557073 | None:intergenic | 35.0% |
| TGCAATGTATTCCTTCATTG+AGG | + | chr2_1:71557173-71557192 | None:intergenic | 35.0% | |
| AAGGAATACATTGCACGATT+TGG | - | chr2_1:71557178-71557197 | Msa0222340:intron | 35.0% | |
| AGAGAAGACTCTTGCAAAAA+TGG | - | chr2_1:71557240-71557259 | Msa0222340:intron | 35.0% | |
| !! | TCTACAAGAACATTGACTTC+GGG | - | chr2_1:71557395-71557414 | Msa0222340:intron | 35.0% |
| CTTGACTGAAAAACTAGACT+TGG | - | chr2_1:71557564-71557583 | Msa0222340:intron | 35.0% | |
| TATTGGGAAGTTTGGATTGT+CGG | - | chr2_1:71557654-71557673 | Msa0222340:intron | 35.0% | |
| CCATCCGATAAATTTCTCAT+AGG | + | chr2_1:71557697-71557716 | None:intergenic | 35.0% | |
| CCTATGAGAAATTTATCGGA+TGG | - | chr2_1:71557694-71557713 | Msa0222340:intron | 35.0% | |
| GAAATTTATCGGATGGACAA+AGG | - | chr2_1:71557701-71557720 | Msa0222340:intron | 35.0% | |
| ! | TTTTAGGCTCATAAATCAGG+TGG | - | chr2_1:71557873-71557892 | Msa0222340:CDS | 35.0% |
| ! | GGTCATAATCGTGACATTTT+GGG | + | chr2_1:71558033-71558052 | None:intergenic | 35.0% |
| ! | AGGTCATAATCGTGACATTT+TGG | + | chr2_1:71558034-71558053 | None:intergenic | 35.0% |
| CCAACCTACATTGTAATACA+AGG | + | chr2_1:71558054-71558073 | None:intergenic | 35.0% | |
| CCTTGTATTACAATGTAGGT+TGG | - | chr2_1:71558051-71558070 | Msa0222340:five_prime_UTR | 35.0% | |
| GAATCAGACATAGAAATCAC+CGG | - | chr2_1:71558132-71558151 | Msa0222340:intron | 35.0% | |
| TGCTTATCAATTTGGTTGCT+TGG | - | chr2_1:71558219-71558238 | Msa0222340:five_prime_UTR | 35.0% | |
| ATTGTAGTACTTGTTTCCTC+TGG | - | chr2_1:71558309-71558328 | Msa0222340:five_prime_UTR | 35.0% | |
| TTTGTTGAGGTGGTAAGGTT+TGG | + | chr2_1:71553847-71553866 | None:intergenic | 40.0% | |
| !! | TCGTTTTTGTTGAGGTGGTA+AGG | + | chr2_1:71553852-71553871 | None:intergenic | 40.0% |
| ! | GAATTTGGAACGTGAGAAGA+AGG | + | chr2_1:71553931-71553950 | None:intergenic | 40.0% |
| AAACATGCGAACCTGGAATT+TGG | + | chr2_1:71553946-71553965 | None:intergenic | 40.0% | |
| AGCTATAAAACATGCGAACC+TGG | + | chr2_1:71553953-71553972 | None:intergenic | 40.0% | |
| AAACGCGCGTTTGAATTAAG+CGG | + | chr2_1:71553981-71554000 | None:intergenic | 40.0% | |
| GAAAAAAGCTGCTCAGAAGA+AGG | - | chr2_1:71554098-71554117 | Msa0222340:three_prime_UTR | 40.0% | |
| ! | GATAGTGTTGCTAACGGAAT+TGG | - | chr2_1:71554195-71554214 | Msa0222340:CDS | 40.0% |
| ! | TAGTGTTGCTAACGGAATTG+GGG | - | chr2_1:71554197-71554216 | Msa0222340:CDS | 40.0% |
| AATATCCCTAGAGAGAGGAT+GGG | + | chr2_1:71554265-71554284 | None:intergenic | 40.0% | |
| ! | ATCCTCTCTCTAGGGATATT+CGG | - | chr2_1:71554265-71554284 | Msa0222340:CDS | 40.0% |
| !! | GAAATCATTTTGGCCCTGAT+TGG | - | chr2_1:71554525-71554544 | Msa0222340:CDS | 40.0% |
| GGCGTTACATTTATCCAATC+AGG | + | chr2_1:71554542-71554561 | None:intergenic | 40.0% | |
| ! | AATCCCATATTTTCGGACAC+TGG | - | chr2_1:71555218-71555237 | Msa0222340:intron | 40.0% |
| ATGCCAGTGTCCGAAAATAT+GGG | + | chr2_1:71555224-71555243 | None:intergenic | 40.0% | |
| TATGCCAGTGTCCGAAAATA+TGG | + | chr2_1:71555225-71555244 | None:intergenic | 40.0% | |
| !! | AGATTTTGACATGGGCTACA+TGG | + | chr2_1:71555361-71555380 | None:intergenic | 40.0% |
| !! | TTCAGACGTTATGGTTTGCT+TGG | - | chr2_1:71555707-71555726 | Msa0222340:intron | 40.0% |
| TCTACGCTACTTACAGCAAT+AGG | - | chr2_1:71555749-71555768 | Msa0222340:intron | 40.0% | |
| ! | ATATCCATGTGGTCTGGAAT+AGG | + | chr2_1:71555788-71555807 | None:intergenic | 40.0% |
| GGATATTTATCACCTTAGCC+GGG | - | chr2_1:71555802-71555821 | Msa0222340:intron | 40.0% | |
| TCATTAGTTGTGACGAGGAA+AGG | - | chr2_1:71555861-71555880 | Msa0222340:intron | 40.0% | |
| TGACGAGGAAAGGTTGAAAT+TGG | - | chr2_1:71555871-71555890 | Msa0222340:intron | 40.0% | |
| GGAGAAAGAAGCTGAAATTC+TGG | - | chr2_1:71555892-71555911 | Msa0222340:CDS | 40.0% | |
| ! | AATTTCAGCAGCACGCTTTT+CGG | + | chr2_1:71556084-71556103 | None:intergenic | 40.0% |
| ! | AAGACACGTGATTTTTCTGG+TGG | - | chr2_1:71556143-71556162 | Msa0222340:intron | 40.0% |
| GAATGGTTGGGTTCATAAAC+AGG | + | chr2_1:71556199-71556218 | None:intergenic | 40.0% | |
| GATGAACCTACAAATCACCT+TGG | - | chr2_1:71556227-71556246 | Msa0222340:CDS | 40.0% | |
| CTTTGGTCGTATATCATAGC+TGG | - | chr2_1:71556881-71556900 | Msa0222340:intron | 40.0% | |
| ! | TAGATTTGGAAGCATGTGTG+TGG | - | chr2_1:71556939-71556958 | Msa0222340:intron | 40.0% |
| CACTCCCAAGATTTCCTTAA+TGG | - | chr2_1:71557010-71557029 | Msa0222340:intron | 40.0% | |
| TCTTCTCTTTACTCTGAGCT+TGG | + | chr2_1:71557228-71557247 | None:intergenic | 40.0% | |
| !! | AGTTTTCCGCTTTGTTGATG+TGG | - | chr2_1:71557306-71557325 | Msa0222340:intron | 40.0% |
| !! | GTTTTCCGCTTTGTTGATGT+GGG | - | chr2_1:71557307-71557326 | Msa0222340:intron | 40.0% |
| !! | TTTTCCGCTTTGTTGATGTG+GGG | - | chr2_1:71557308-71557327 | Msa0222340:intron | 40.0% |
| !! | CTACAAGAACATTGACTTCG+GGG | - | chr2_1:71557396-71557415 | Msa0222340:intron | 40.0% |
| AATCACCTGTCATAAGCTTC+AGG | + | chr2_1:71557480-71557499 | None:intergenic | 40.0% | |
| GAAGCTTATGACAGGTGATT+TGG | - | chr2_1:71557480-71557499 | Msa0222340:intron | 40.0% | |
| !! | GGTGATTTGGTTCCTTTAGA+TGG | - | chr2_1:71557493-71557512 | Msa0222340:intron | 40.0% |
| ! | TTTGGTTCCTTTAGATGGCA+TGG | - | chr2_1:71557498-71557517 | Msa0222340:intron | 40.0% |
| !! | CTAGTTTTTCAGTCAAGTGC+TGG | + | chr2_1:71557561-71557580 | None:intergenic | 40.0% |
| !! | AAAAGAGTACCCTGGAAATG+AGG | - | chr2_1:71557612-71557631 | Msa0222340:intron | 40.0% |
| TCCTTTCTTCCTCATTTCCA+GGG | + | chr2_1:71557624-71557643 | None:intergenic | 40.0% | |
| ATCCTTTCTTCCTCATTTCC+AGG | + | chr2_1:71557625-71557644 | None:intergenic | 40.0% | |
| AAAGGATGAGAGCAGCTATT+GGG | - | chr2_1:71557638-71557657 | Msa0222340:intron | 40.0% | |
| ATTGGGAAGTTTGGATTGTC+GGG | - | chr2_1:71557655-71557674 | Msa0222340:intron | 40.0% | |
| TCATCTAATAGCAGCAAGTG+AGG | + | chr2_1:71557763-71557782 | None:intergenic | 40.0% | |
| ATCCCATTCATTCAATGCCT+CGG | + | chr2_1:71557827-71557846 | None:intergenic | 40.0% | |
| TGATCAAACAGTGACCAGAT+GGG | - | chr2_1:71557918-71557937 | Msa0222340:CDS | 40.0% | |
| CATAATATCACCTTCCCATC+TGG | + | chr2_1:71557935-71557954 | None:intergenic | 40.0% | |
| CAGATGGGAAGGTGATATTA+TGG | - | chr2_1:71557933-71557952 | Msa0222340:CDS | 40.0% | |
| ! | ATAAACCCGCCTTTTCCTTT+AGG | + | chr2_1:71557972-71557991 | None:intergenic | 40.0% |
| ! | TGAGGTGGTAAGGTTTGGTT+TGG | + | chr2_1:71553842-71553861 | None:intergenic | 45.0% |
| CTTCTCACGTTCCAAATTCC+AGG | - | chr2_1:71553932-71553951 | Msa0222340:three_prime_UTR | 45.0% | |
| !!! | CTGAGCAGCTTTTTTCTTGC+TGG | + | chr2_1:71554094-71554113 | None:intergenic | 45.0% |
| !!! | CGAAGCCTTTTTCGATGAAG+CGG | + | chr2_1:71554163-71554182 | None:intergenic | 45.0% |
| CGCTTCATCGAAAAAGGCTT+CGG | - | chr2_1:71554161-71554180 | Msa0222340:CDS | 45.0% | |
| ATCGAAAAAGGCTTCGGAGA+AGG | - | chr2_1:71554167-71554186 | Msa0222340:CDS | 45.0% | |
| GATATCTGATCGGACATGCA+CGG | - | chr2_1:71554227-71554246 | Msa0222340:CDS | 45.0% | |
| ATATCTGATCGGACATGCAC+GGG | - | chr2_1:71554228-71554247 | Msa0222340:CDS | 45.0% | |
| TTTGTTCCCATCCTCTCTCT+AGG | - | chr2_1:71554256-71554275 | Msa0222340:CDS | 45.0% | |
| TTGTTCCCATCCTCTCTCTA+GGG | - | chr2_1:71554257-71554276 | Msa0222340:CDS | 45.0% | |
| GAATATCCCTAGAGAGAGGA+TGG | + | chr2_1:71554266-71554285 | None:intergenic | 45.0% | |
| ! | TCCTCTCTCTAGGGATATTC+GGG | - | chr2_1:71554266-71554285 | Msa0222340:CDS | 45.0% |
| AAGTGAATCCATCAGACCCT+TGG | - | chr2_1:71554917-71554936 | Msa0222340:CDS | 45.0% | |
| AATTACCACCAAGGGTCTGA+TGG | + | chr2_1:71554928-71554947 | None:intergenic | 45.0% | |
| TGAACACCTAGTCAAGCAGT+TGG | - | chr2_1:71555314-71555333 | Msa0222340:intron | 45.0% | |
| GAACACCTAGTCAAGCAGTT+GGG | - | chr2_1:71555315-71555334 | Msa0222340:intron | 45.0% | |
| TGTCAGAGGCTTCAATTTCC+CGG | + | chr2_1:71555823-71555842 | None:intergenic | 45.0% | |
| TTTATGTTCCAGGAGGATGG+TGG | - | chr2_1:71556002-71556021 | Msa0222340:CDS | 45.0% | |
| ! | TGAACGAGTTTTTGAACGGC+TGG | - | chr2_1:71556037-71556056 | Msa0222340:CDS | 45.0% |
| ! | TTTTGAACGGCTGGAAGCTA+TGG | - | chr2_1:71556046-71556065 | Msa0222340:CDS | 45.0% |
| TGGTTTCAACAAGCAGATGC+AGG | - | chr2_1:71556115-71556134 | Msa0222340:intron | 45.0% | |
| !! | CACGTGATTTTTCTGGTGGA+TGG | - | chr2_1:71556147-71556166 | Msa0222340:intron | 45.0% |
| ! | TTTCTGGTGGATGGAGAATG+AGG | - | chr2_1:71556156-71556175 | Msa0222340:intron | 45.0% |
| ! | GGGATACCAAGGTGATTTGT+AGG | + | chr2_1:71556236-71556255 | None:intergenic | 45.0% |
| !! | GTTACTCTTTTCGGGGAAGA+GGG | + | chr2_1:71556256-71556275 | None:intergenic | 45.0% |
| !! | AGTTACTCTTTTCGGGGAAG+AGG | + | chr2_1:71556257-71556276 | None:intergenic | 45.0% |
| !! | TTCTAGTTTGTTCGTTGGGC+AGG | - | chr2_1:71556457-71556476 | Msa0222340:intron | 45.0% |
| AGAACCAGATGAAGCAGTAC+AGG | - | chr2_1:71557128-71557147 | Msa0222340:intron | 45.0% | |
| ! | TACATTGCACGATTTGGCCA+TGG | - | chr2_1:71557184-71557203 | Msa0222340:intron | 45.0% |
| !!! | GAGCTAGTTTTGCTGATCCA+TGG | + | chr2_1:71557204-71557223 | None:intergenic | 45.0% |
| ACTCTTGCAAAAATGGAGCG+CGG | - | chr2_1:71557247-71557266 | Msa0222340:intron | 45.0% | |
| GTTTCCCCACATCAACAAAG+CGG | + | chr2_1:71557315-71557334 | None:intergenic | 45.0% | |
| CAAATGTCACCTCCACAAAC+TGG | + | chr2_1:71557354-71557373 | None:intergenic | 45.0% | |
| CAGTTTGTGGAGGTGACATT+TGG | - | chr2_1:71557352-71557371 | Msa0222340:intron | 45.0% | |
| TTTAGACTCCAGGATTGCTC+TGG | - | chr2_1:71557423-71557442 | Msa0222340:intron | 45.0% | |
| ACGTTCCTGAAGCTTATGAC+AGG | - | chr2_1:71557472-71557491 | Msa0222340:intron | 45.0% | |
| GTGCAATGCGAAGGTGATTA+TGG | + | chr2_1:71557531-71557550 | None:intergenic | 45.0% | |
| GGTGAAATTGTGCAATGCGA+AGG | + | chr2_1:71557540-71557559 | None:intergenic | 45.0% | |
| ACCCTGGAAATGAGGAAGAA+AGG | - | chr2_1:71557620-71557639 | Msa0222340:intron | 45.0% | |
| GAAAGGATGAGAGCAGCTAT+TGG | - | chr2_1:71557637-71557656 | Msa0222340:intron | 45.0% | |
| AGAGCAGCTATTGGGAAGTT+TGG | - | chr2_1:71557646-71557665 | Msa0222340:intron | 45.0% | |
| !! | TAGCCGAGGCATTGAATGAA+TGG | - | chr2_1:71557821-71557840 | Msa0222340:intron | 45.0% |
| !! | AGCCGAGGCATTGAATGAAT+GGG | - | chr2_1:71557822-71557841 | Msa0222340:intron | 45.0% |
| !! | GAGGCATTGAATGAATGGGA+TGG | - | chr2_1:71557826-71557845 | Msa0222340:intron | 45.0% |
| GCATTGAATGAATGGGATGG+TGG | - | chr2_1:71557829-71557848 | Msa0222340:intron | 45.0% | |
| AGCACACACCCATATCTCAT+GGG | + | chr2_1:71557899-71557918 | None:intergenic | 45.0% | |
| CTGATCAAACAGTGACCAGA+TGG | - | chr2_1:71557917-71557936 | Msa0222340:CDS | 45.0% | |
| GGATTTCAAGCTGCACCTAA+AGG | - | chr2_1:71557954-71557973 | Msa0222340:CDS | 45.0% | |
| CAAGCTGCACCTAAAGGAAA+AGG | - | chr2_1:71557960-71557979 | Msa0222340:CDS | 45.0% | |
| GCGGGTTTATCTGACTGAAA+AGG | - | chr2_1:71557982-71558001 | Msa0222340:CDS | 45.0% | |
| ! | CTTGAGGTGGATTTCTCTCA+TGG | - | chr2_1:71558086-71558105 | Msa0222340:intron | 45.0% |
| TGAAGTGGCGATGAGGAGTT+AGG | + | chr2_1:71553897-71553916 | None:intergenic | 50.0% | |
| GATCTTGTGAAGTGGCGATG+AGG | + | chr2_1:71553904-71553923 | None:intergenic | 50.0% | |
| !!! | CTTTTTCGATGAAGCGGTGG+CGG | + | chr2_1:71554157-71554176 | None:intergenic | 50.0% |
| !!! | AGCCTTTTTCGATGAAGCGG+TGG | + | chr2_1:71554160-71554179 | None:intergenic | 50.0% |
| GAAAAAGGCTTCGGAGAAGG+CGG | - | chr2_1:71554170-71554189 | Msa0222340:CDS | 50.0% | |
| ! | GCGGTGGATAGTGTTGCTAA+CGG | - | chr2_1:71554189-71554208 | Msa0222340:CDS | 50.0% |
| ACCCGAATATCCCTAGAGAG+AGG | + | chr2_1:71554270-71554289 | None:intergenic | 50.0% | |
| TGAATCCATCAGACCCTTGG+TGG | - | chr2_1:71554920-71554939 | Msa0222340:CDS | 50.0% | |
| TTGCTTGGATTGAACGGCTG+TGG | - | chr2_1:71555722-71555741 | Msa0222340:intron | 50.0% | |
| ! | GGTCTGGAATAGGAAGCTCA+CGG | + | chr2_1:71555778-71555797 | None:intergenic | 50.0% |
| GCTTCCTATTCCAGACCACA+TGG | - | chr2_1:71555781-71555800 | Msa0222340:intron | 50.0% | |
| AGGCTTCAATTTCCCGGCTA+AGG | + | chr2_1:71555817-71555836 | None:intergenic | 50.0% | |
| GGCTGTCATTAGTTGTGACG+AGG | - | chr2_1:71555856-71555875 | Msa0222340:intron | 50.0% | |
| ! | AGCTGAAATTCTGGGAGCAC+AGG | - | chr2_1:71555901-71555920 | Msa0222340:CDS | 50.0% |
| GGCTGTGCTGTATTGTGCTT+TGG | - | chr2_1:71556589-71556608 | Msa0222340:intron | 50.0% | |
| ! | TTTGGAAGCATGTGTGTGGC+TGG | - | chr2_1:71556943-71556962 | Msa0222340:intron | 50.0% |
| TGTTCAGACACGTGCTGAAC+TGG | - | chr2_1:71557102-71557121 | Msa0222340:intron | 50.0% | |
| ACCAGATGAAGCAGTACAGG+TGG | - | chr2_1:71557131-71557150 | Msa0222340:intron | 50.0% | |
| CCAGATGAAGCAGTACAGGT+GGG | - | chr2_1:71557132-71557151 | Msa0222340:intron | 50.0% | |
| GGAGCAGATTGCCTCAATGA+AGG | - | chr2_1:71557159-71557178 | Msa0222340:intron | 50.0% | |
| ACAAACTGGAGAACAGGTGG+GGG | + | chr2_1:71557340-71557359 | None:intergenic | 50.0% | |
| CACAAACTGGAGAACAGGTG+GGG | + | chr2_1:71557341-71557360 | None:intergenic | 50.0% | |
| CCACAAACTGGAGAACAGGT+GGG | + | chr2_1:71557342-71557361 | None:intergenic | 50.0% | |
| TCCACAAACTGGAGAACAGG+TGG | + | chr2_1:71557343-71557362 | None:intergenic | 50.0% | |
| ACCTGTTCTCCAGTTTGTGG+AGG | - | chr2_1:71557342-71557361 | Msa0222340:intron | 50.0% | |
| ACCTCCACAAACTGGAGAAC+AGG | + | chr2_1:71557346-71557365 | None:intergenic | 50.0% | |
| ATTGCTCTGGTTGGACCCAA+TGG | - | chr2_1:71557436-71557455 | Msa0222340:intron | 50.0% | |
| CGACGAACCATGCCATCTAA+AGG | + | chr2_1:71557508-71557527 | None:intergenic | 50.0% | |
| TGGATTGTCGGGTAAAGCAC+AGG | - | chr2_1:71557666-71557685 | Msa0222340:intron | 50.0% | |
| CAGCAAGTGAGGCTGTCTAT+AGG | + | chr2_1:71557752-71557771 | None:intergenic | 50.0% | |
| !! | GACAATTGACTCGTTAGCCG+AGG | - | chr2_1:71557807-71557826 | Msa0222340:intron | 50.0% |
| ! | GAATGAATGGGATGGTGGCA+TGG | - | chr2_1:71557834-71557853 | Msa0222340:intron | 50.0% |
| ATCAGGTGGCCCATGAGATA+TGG | - | chr2_1:71557887-71557906 | Msa0222340:CDS | 50.0% | |
| TCAGGTGGCCCATGAGATAT+GGG | - | chr2_1:71557888-71557907 | Msa0222340:CDS | 50.0% | |
| CAGCACACACCCATATCTCA+TGG | + | chr2_1:71557900-71557919 | None:intergenic | 50.0% | |
| CAAACAGTGACCAGATGGGA+AGG | - | chr2_1:71557922-71557941 | Msa0222340:CDS | 50.0% | |
| GCTGCACCTAAAGGAAAAGG+CGG | - | chr2_1:71557963-71557982 | Msa0222340:CDS | 50.0% | |
| CTGCACCTAAAGGAAAAGGC+GGG | - | chr2_1:71557964-71557983 | Msa0222340:CDS | 50.0% | |
| !! | TTGGTGTTGCTAGCTGCTTG+AGG | - | chr2_1:71558070-71558089 | Msa0222340:intron | 50.0% |
| CTTCCCTCCTCTCTTTGCAG+CGG | + | chr2_1:71554130-71554149 | None:intergenic | 55.0% | |
| CGCCACCGCTTCATCGAAAA+AGG | - | chr2_1:71554155-71554174 | Msa0222340:CDS | 55.0% | |
| ACCTAGTCAAGCAGTTGGGC+TGG | - | chr2_1:71555319-71555338 | Msa0222340:intron | 55.0% | |
| ACCAGCCCAACTGCTTGACT+AGG | + | chr2_1:71555323-71555342 | None:intergenic | 55.0% | |
| !! | AGCAGTTGGGCTGGTAGCAA+TGG | - | chr2_1:71555328-71555347 | Msa0222340:intron | 55.0% |
| AGCCTCTGACATGTCTGCGT+TGG | - | chr2_1:71555832-71555851 | Msa0222340:intron | 55.0% | |
| CTCCAACGCAGACATGTCAG+AGG | + | chr2_1:71555837-71555856 | None:intergenic | 55.0% | |
| CTCTGACATGTCTGCGTTGG+AGG | - | chr2_1:71555835-71555854 | Msa0222340:intron | 55.0% | |
| ! | ATGTTCCAGGAGGATGGTGG+TGG | - | chr2_1:71556005-71556024 | Msa0222340:CDS | 55.0% |
| TTCGGGGAAGAGGGATACCA+AGG | + | chr2_1:71556247-71556266 | None:intergenic | 55.0% | |
| CCCACCTGTACTGCTTCATC+TGG | + | chr2_1:71557135-71557154 | None:intergenic | 55.0% | |
| CTTGCAAAAATGGAGCGCGG+TGG | - | chr2_1:71557250-71557269 | Msa0222340:intron | 55.0% | |
| ! | CGGTGGACTTACAGAGAAGG+TGG | - | chr2_1:71557267-71557286 | Msa0222340:intron | 55.0% |
| CCCACCTGTTCTCCAGTTTG+TGG | - | chr2_1:71557339-71557358 | Msa0222340:intron | 55.0% | |
| ! | TCGGGGTCGATTTAGACTCC+AGG | - | chr2_1:71557413-71557432 | Msa0222340:intron | 55.0% |
| GACTCCAGGATTGCTCTGGT+TGG | - | chr2_1:71557427-71557446 | Msa0222340:intron | 55.0% | |
| TGGTTGGACCCAATGGAGCT+GGG | - | chr2_1:71557443-71557462 | Msa0222340:intron | 55.0% | |
| GTGCTCTTCCCAGCTCCATT+GGG | + | chr2_1:71557454-71557473 | None:intergenic | 55.0% | |
| GGAGTCGCGTGATCTTTGCA+TGG | - | chr2_1:71557722-71557741 | Msa0222340:intron | 55.0% | |
| ! | ATGGGATGGTGGCATGGTTC+TGG | - | chr2_1:71557840-71557859 | Msa0222340:CDS | 55.0% |
| ! | GTGTTGCTAGCTGCTTGAGG+TGG | - | chr2_1:71558073-71558092 | Msa0222340:intron | 55.0% |
| CGCTGCAAAGAGAGGAGGGA+AGG | - | chr2_1:71554128-71554147 | Msa0222340:CDS | 60.0% | |
| AAAGGCTTCGGAGAAGGCGG+TGG | - | chr2_1:71554173-71554192 | Msa0222340:CDS | 60.0% | |
| CTTCACCACCACCATCCTCC+TGG | + | chr2_1:71556013-71556032 | None:intergenic | 60.0% | |
| ! | GGAAGCATGTGTGTGGCTGG+AGG | - | chr2_1:71556946-71556965 | Msa0222340:intron | 60.0% |
| GAAGCAGTACAGGTGGGAGC+AGG | - | chr2_1:71557138-71557157 | Msa0222340:intron | 60.0% | |
| ! | GCGCGGTGGACTTACAGAGA+AGG | - | chr2_1:71557264-71557283 | Msa0222340:intron | 60.0% |
| GGGTCCAACCAGAGCAATCC+TGG | + | chr2_1:71557434-71557453 | None:intergenic | 60.0% | |
| CTGGTTGGACCCAATGGAGC+TGG | - | chr2_1:71557442-71557461 | Msa0222340:intron | 60.0% | |
| CGTGCTCTTCCCAGCTCCAT+TGG | + | chr2_1:71557455-71557474 | None:intergenic | 60.0% | |
| AAGGCAGCGTCTGTGATGCG+CGG | - | chr2_1:71558001-71558020 | Msa0222340:CDS | 60.0% | |
| CCCTCCTCTCTTTGCAGCGG+CGG | + | chr2_1:71554127-71554146 | None:intergenic | 65.0% | |
| CCGCCGCTGCAAAGAGAGGA+GGG | - | chr2_1:71554124-71554143 | Msa0222340:CDS | 65.0% | |
| GCTGCCGCCGCTGCAAAGAG+AGG | - | chr2_1:71554120-71554139 | Msa0222340:exon | 70.0% | |
| GCCGCCGCTGCAAAGAGAGG+AGG | - | chr2_1:71554123-71554142 | Msa0222340:exon | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 71553791 | 71558332 | 71553791 | ID=Msa0222340;Name=Msa0222340 |
| chr2_1 | mRNA | 71553791 | 71558332 | 71553791 | ID=Msa0222340-mRNA-1;Parent=Msa0222340;Name=Msa0222340-mRNA-1;_AED=0.18;_eAED=0.18;_QI=192|0.83|0.85|1|0.83|0.71|7|333|607 |
| chr2_1 | exon | 71553791 | 71555181 | 71553791 | ID=Msa0222340-mRNA-1:exon:20582;Parent=Msa0222340-mRNA-1 |
| chr2_1 | exon | 71555875 | 71556109 | 71555875 | ID=Msa0222340-mRNA-1:exon:20581;Parent=Msa0222340-mRNA-1 |
| chr2_1 | exon | 71556201 | 71556411 | 71556201 | ID=Msa0222340-mRNA-1:exon:20580;Parent=Msa0222340-mRNA-1 |
| chr2_1 | exon | 71556520 | 71556593 | 71556520 | ID=Msa0222340-mRNA-1:exon:20579;Parent=Msa0222340-mRNA-1 |
| chr2_1 | exon | 71556722 | 71556757 | 71556722 | ID=Msa0222340-mRNA-1:exon:20578;Parent=Msa0222340-mRNA-1 |
| chr2_1 | exon | 71557836 | 71558074 | 71557836 | ID=Msa0222340-mRNA-1:exon:20577;Parent=Msa0222340-mRNA-1 |
| chr2_1 | exon | 71558170 | 71558332 | 71558170 | ID=Msa0222340-mRNA-1:exon:20576;Parent=Msa0222340-mRNA-1 |
| chr2_1 | five_prime_UTR | 71558170 | 71558332 | 71558170 | ID=Msa0222340-mRNA-1:five_prime_utr;Parent=Msa0222340-mRNA-1 |
| chr2_1 | five_prime_UTR | 71558046 | 71558074 | 71558046 | ID=Msa0222340-mRNA-1:five_prime_utr;Parent=Msa0222340-mRNA-1 |
| chr2_1 | CDS | 71557836 | 71558045 | 71557836 | ID=Msa0222340-mRNA-1:cds;Parent=Msa0222340-mRNA-1 |
| chr2_1 | CDS | 71556722 | 71556757 | 71556722 | ID=Msa0222340-mRNA-1:cds;Parent=Msa0222340-mRNA-1 |
| chr2_1 | CDS | 71556520 | 71556593 | 71556520 | ID=Msa0222340-mRNA-1:cds;Parent=Msa0222340-mRNA-1 |
| chr2_1 | CDS | 71556201 | 71556411 | 71556201 | ID=Msa0222340-mRNA-1:cds;Parent=Msa0222340-mRNA-1 |
| chr2_1 | CDS | 71555875 | 71556109 | 71555875 | ID=Msa0222340-mRNA-1:cds;Parent=Msa0222340-mRNA-1 |
| chr2_1 | CDS | 71554124 | 71555181 | 71554124 | ID=Msa0222340-mRNA-1:cds;Parent=Msa0222340-mRNA-1 |
| chr2_1 | three_prime_UTR | 71553791 | 71554123 | 71553791 | ID=Msa0222340-mRNA-1:three_prime_utr;Parent=Msa0222340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
