AlfalfaGEDB | Msa1158670

M. sativa cultivar zhongmu-4 / Msa1158670

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1158670	XP_003624631.1	95.349	258	6	3	1	258	1	252	1.30e-177	498

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1158670	A2Q5V9	95.349	258	6	3	1	258	1	252	6.22e-178	498

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0012040	Msa1158670	0.816519	5.302974e-52	-8.615850e-47
Msa0018210	Msa1158670	0.814912	1.209848e-51	-8.615850e-47
Msa0042980	Msa1158670	-0.814498	1.494246e-51	-8.615850e-47
Msa0051200	Msa1158670	0.806829	6.800926e-50	-8.615850e-47
Msa0051460	Msa1158670	0.813294	2.753097e-51	-8.615850e-47
Msa0052030	Msa1158670	0.828875	7.050860e-55	-8.615850e-47
Msa0055240	Msa1158670	0.811883	5.601937e-51	-8.615850e-47
Msa0061150	Msa1158670	0.808151	3.566443e-50	-8.615850e-47
Msa0102120	Msa1158670	0.808161	3.548595e-50	-8.615850e-47
Msa0105700	Msa1158670	0.844060	9.550449e-59	-8.615850e-47
Msa0607540	Msa1158670	0.855148	7.659949e-62	-8.615850e-47
Msa0608710	Msa1158670	0.836126	1.123586e-56	-8.615850e-47
Msa0621750	Msa1158670	-0.833131	6.361071e-56	-8.615850e-47
Msa0628740	Msa1158670	0.804174	2.452062e-49	-8.615850e-47
Msa0631990	Msa1158670	0.810934	9.005956e-51	-8.615850e-47
Msa0640380	Msa1158670	0.847263	1.291859e-59	-8.615850e-47
Msa0647830	Msa1158670	0.853771	1.917410e-61	-8.615850e-47
Msa0660300	Msa1158670	0.828081	1.096276e-54	-8.615850e-47
Msa0663920	Msa1158670	0.802901	4.502880e-49	-8.615850e-47
Msa0667890	Msa1158670	0.814912	1.209626e-51	-8.615850e-47
Msa0670660	Msa1158670	0.819227	1.297518e-52	-8.615850e-47
Msa0678820	Msa1158670	0.862871	3.728534e-64	-8.615850e-47
Msa0688070	Msa1158670	0.802918	4.466584e-49	-8.615850e-47
Msa0688670	Msa1158670	0.809311	2.014433e-50	-8.615850e-47
Msa0690440	Msa1158670	0.844507	7.244760e-59	-8.615850e-47
Msa0704730	Msa1158670	0.814050	1.876792e-51	-8.615850e-47
Msa0712080	Msa1158670	0.840100	1.065709e-57	-8.615850e-47
Msa0714340	Msa1158670	0.810796	9.644076e-51	-8.615850e-47
Msa0722930	Msa1158670	0.810804	9.607817e-51	-8.615850e-47
Msa0723110	Msa1158670	0.806037	9.990407e-50	-8.615850e-47
Msa0723140	Msa1158670	0.806950	6.411946e-50	-8.615850e-47
Msa0724560	Msa1158670	0.819196	1.318691e-52	-8.615850e-47
Msa0731180	Msa1158670	0.837694	4.468889e-57	-8.615850e-47
Msa0749930	Msa1158670	0.856736	2.629332e-62	-8.615850e-47
Msa0751210	Msa1158670	0.802398	5.717681e-49	-8.615850e-47
Msa0756310	Msa1158670	0.851496	8.547658e-61	-8.615850e-47
Msa0795080	Msa1158670	0.803386	3.573503e-49	-8.615850e-47
Msa0795920	Msa1158670	0.801140	1.036146e-48	-8.615850e-47
Msa0798860	Msa1158670	0.839315	1.705467e-57	-8.615850e-47
Msa0801360	Msa1158670	0.832305	1.019809e-55	-8.615850e-47
Msa0807050	Msa1158670	0.825579	4.339967e-54	-8.615850e-47
Msa0812760	Msa1158670	0.800699	1.274865e-48	-8.615850e-47
Msa0830420	Msa1158670	0.859193	4.899011e-63	-8.615850e-47
Msa0832990	Msa1158670	0.825038	5.828130e-54	-8.615850e-47
Msa0835730	Msa1158670	0.855173	7.535757e-62	-8.615850e-47
Msa0839830	Msa1158670	0.825095	5.649200e-54	-8.615850e-47
Msa0143920	Msa1158670	0.811172	7.994364e-51	-8.615850e-47
Msa0152170	Msa1158670	0.828747	7.568987e-55	-8.615850e-47
Msa0178860	Msa1158670	-0.813838	2.089624e-51	-8.615850e-47
Msa0190250	Msa1158670	0.804563	2.034420e-49	-8.615850e-47
Msa0197130	Msa1158670	0.817963	2.509949e-52	-8.615850e-47
Msa0206010	Msa1158670	0.800207	1.606374e-48	-8.615850e-47
Msa0222340	Msa1158670	0.857389	1.687092e-62	-8.615850e-47
Msa0379640	Msa1158670	0.824691	7.037681e-54	-8.615850e-47
Msa0388840	Msa1158670	0.897316	1.582887e-76	-8.615850e-47
Msa0389340	Msa1158670	0.800042	1.735036e-48	-8.615850e-47
Msa0389360	Msa1158670	0.805495	1.298562e-49	-8.615850e-47
Msa0389810	Msa1158670	0.871179	8.321158e-67	-8.615850e-47
Msa0394340	Msa1158670	0.841662	4.147779e-58	-8.615850e-47
Msa0409080	Msa1158670	0.811500	6.786711e-51	-8.615850e-47
Msa0412840	Msa1158670	0.814051	1.875482e-51	-8.615850e-47
Msa0428930	Msa1158670	0.813160	2.946523e-51	-8.615850e-47
Msa0433410	Msa1158670	-0.804053	2.598607e-49	-8.615850e-47
Msa0438050	Msa1158670	0.833511	5.114932e-56	-8.615850e-47
Msa0442200	Msa1158670	0.843988	9.983221e-59	-8.615850e-47
Msa0442850	Msa1158670	0.801578	8.428704e-49	-8.615850e-47
Msa0465680	Msa1158670	-0.805619	1.223182e-49	-8.615850e-47
Msa0468130	Msa1158670	0.868633	5.649064e-66	-8.615850e-47
Msa0475490	Msa1158670	0.837940	3.864695e-57	-8.615850e-47
Msa0477130	Msa1158670	-0.824758	6.784835e-54	-8.615850e-47
Msa0477260	Msa1158670	0.811216	7.822674e-51	-8.615850e-47
Msa0482190	Msa1158670	-0.837284	5.693297e-57	-8.615850e-47
Msa0982270	Msa1158670	0.880541	5.041473e-70	-8.615850e-47
Msa0992490	Msa1158670	-0.817330	3.487078e-52	-8.615850e-47
Msa1002480	Msa1158670	0.832714	8.074634e-56	-8.615850e-47
Msa1012830	Msa1158670	0.800371	1.487393e-48	-8.615850e-47
Msa1031810	Msa1158670	0.906007	2.347814e-80	-8.615850e-47
Msa1034710	Msa1158670	0.812518	4.071615e-51	-8.615850e-47
Msa1054410	Msa1158670	0.846989	1.535826e-59	-8.615850e-47
Msa1070850	Msa1158670	0.956134	6.025747e-114	-8.615850e-47
Msa1074530	Msa1158670	0.822518	2.269947e-53	-8.615850e-47
Msa1079730	Msa1158670	-0.813436	2.562225e-51	-8.615850e-47
Msa1090260	Msa1158670	0.818957	1.494456e-52	-8.615850e-47
Msa1092090	Msa1158670	0.856242	3.672984e-62	-8.615850e-47
Msa0263840	Msa1158670	0.817489	3.211501e-52	-8.615850e-47
Msa0276770	Msa1158670	0.836630	8.363427e-57	-8.615850e-47
Msa0301680	Msa1158670	0.822206	2.681871e-53	-8.615850e-47
Msa0307470	Msa1158670	0.819467	1.143959e-52	-8.615850e-47
Msa0309550	Msa1158670	0.843388	1.445144e-58	-8.615850e-47
Msa0315290	Msa1158670	0.814329	1.628912e-51	-8.615850e-47
Msa0326110	Msa1158670	0.807299	5.410262e-50	-8.615850e-47
Msa0344830	Msa1158670	0.817031	4.071603e-52	-8.615850e-47
Msa0347610	Msa1158670	0.833899	4.089812e-56	-8.615850e-47
Msa1118750	Msa1158670	0.934089	6.921826e-96	-8.615850e-47
Msa1118930	Msa1158670	0.801838	7.452420e-49	-8.615850e-47
Msa1124540	Msa1158670	-0.818740	1.673828e-52	-8.615850e-47
Msa1129210	Msa1158670	0.834727	2.535100e-56	-8.615850e-47
Msa1130110	Msa1158670	0.811986	5.321586e-51	-8.615850e-47
Msa1132950	Msa1158670	0.837994	3.742676e-57	-8.615850e-47
Msa1132970	Msa1158670	0.816047	6.763921e-52	-8.615850e-47
Msa1143270	Msa1158670	0.842452	2.563604e-58	-8.615850e-47
Msa1151710	Msa1158670	0.827521	1.494473e-54	-8.615850e-47
Msa1151720	Msa1158670	0.804658	1.943522e-49	-8.615850e-47
Msa1158670	Msa1168040	-0.820852	5.508990e-53	-8.615850e-47
Msa1158670	Msa1183100	-0.801650	8.146337e-49	-8.615850e-47
Msa1158670	Msa1187520	0.829228	5.788559e-55	-8.615850e-47
Msa1158670	Msa1199560	0.824910	6.247756e-54	-8.615850e-47
Msa1158670	Msa1205130	0.804073	2.573230e-49	-8.615850e-47
Msa1158670	Msa1207380	0.801498	8.754332e-49	-8.615850e-47
Msa1158670	Msa1212170	0.865435	5.918357e-65	-8.615850e-47
Msa1158670	Msa1212250	0.875456	3.038569e-68	-8.615850e-47
Msa1158670	Msa1217810	0.814072	1.855403e-51	-8.615850e-47
Msa1158670	Msa1224480	0.803542	3.316865e-49	-8.615850e-47
Msa1158670	Msa1228310	0.804664	1.937602e-49	-8.615850e-47
Msa1158670	Msa1230830	0.843561	1.299023e-58	-8.615850e-47
Msa1158670	Msa1233500	0.847678	9.935738e-60	-8.615850e-47
Msa1158670	Msa1235400	0.818316	2.089285e-52	-8.615850e-47
Msa1158670	Msa1258380	-0.836248	1.046050e-56	-8.615850e-47
Msa1158670	Msa1271200	0.802156	6.412705e-49	-8.615850e-47
Msa1158670	Msa1276440	0.807992	3.854411e-50	-8.615850e-47
Msa1158670	Msa1276510	0.819352	1.214928e-52	-8.615850e-47
Msa1158670	Msa1279210	0.846748	1.787294e-59	-8.615850e-47
Msa1158670	Msa1282920	0.822153	2.759215e-53	-8.615850e-47
Msa1158670	Msa1292730	0.809302	2.023912e-50	-8.615850e-47
Msa1158670	Msa1296880	0.812763	3.599978e-51	-8.615850e-47
Msa1158670	Msa1302190	-0.803228	3.853596e-49	-8.615850e-47
Msa1158670	Msa1306750	0.825991	3.465007e-54	-8.615850e-47
Msa1158670	Msa1307740	0.871783	5.253859e-67	-8.615850e-47
Msa1158670	Msa1314770	0.817489	3.211501e-52	-8.615850e-47
Msa1158670	Msa1322190	0.831840	1.328753e-55	-8.615850e-47
Msa1158670	Msa1328700	0.827667	1.378722e-54	-8.615850e-47
Msa1158670	Msa1346080	0.804753	1.856638e-49	-8.615850e-47
Msa1158670	Msa1348600	0.804363	2.239130e-49	-8.615850e-47
Msa1158670	Msa1369530	0.802292	6.011114e-49	-8.615850e-47
Msa1158670	Msa1377070	0.811689	6.174114e-51	-8.615850e-47
Msa1158670	Msa1378230	0.843503	1.346190e-58	-8.615850e-47
Msa1158670	Msa1379710	0.804691	1.913235e-49	-8.615850e-47
Msa1158670	Msa1382160	0.807440	5.050022e-50	-8.615850e-47
Msa1158670	Msa1382930	0.825378	4.844208e-54	-8.615850e-47
Msa1158670	Msa1384350	0.810856	9.362061e-51	-8.615850e-47
Msa1158670	Msa1395440	0.832297	1.024355e-55	-8.615850e-47
Msa1158670	Msa1403340	0.802862	4.585959e-49	-8.615850e-47
Msa1158670	Msa1434240	0.830515	2.811650e-55	-8.615850e-47
Msa1158670	Msa1435370	0.800544	1.371558e-48	-8.615850e-47
Msa1158670	Msa1437680	0.859518	3.913120e-63	-8.615850e-47
Msa1158670	Msa1438910	0.818188	2.233081e-52	-8.615850e-47
Msa1158670	Msa1440910	0.803495	3.391626e-49	-8.615850e-47
Msa1158670	Msa1444250	-0.829727	4.378389e-55	-8.615850e-47
Msa1158670	Msa1444740	0.839484	1.541108e-57	-8.615850e-47
Msa1158670	Msa1451620	-0.802390	5.739939e-49	-8.615850e-47
Msa1158670	Msa1454860	0.812129	4.952069e-51	-8.615850e-47
Msa1158670	Msa1464940	0.824006	1.019605e-53	-8.615850e-47
Msa0485500	Msa1158670	-0.832738	7.966497e-56	-8.615850e-47
Msa0488270	Msa1158670	0.810064	1.387795e-50	-8.615850e-47
Msa0489610	Msa1158670	0.831973	1.231783e-55	-8.615850e-47
Msa0493630	Msa1158670	0.805766	1.139028e-49	-8.615850e-47
Msa0502100	Msa1158670	0.810780	9.723048e-51	-8.615850e-47
Msa0540070	Msa1158670	0.815766	7.811917e-52	-8.615850e-47
Msa0543900	Msa1158670	0.854118	1.522930e-61	-8.615850e-47
Msa0553460	Msa1158670	0.851262	9.950152e-61	-8.615850e-47
Msa0561130	Msa1158670	-0.805872	1.082494e-49	-8.615850e-47
Msa0564510	Msa1158670	0.837258	5.780507e-57	-8.615850e-47
Msa0568240	Msa1158670	0.851031	1.156509e-60	-8.615850e-47
Msa0570330	Msa1158670	0.847119	1.415000e-59	-8.615850e-47
Msa0577120	Msa1158670	0.830176	3.403200e-55	-8.615850e-47
Msa0595850	Msa1158670	0.818613	1.788936e-52	-8.615850e-47
Msa0599580	Msa1158670	0.806633	7.483314e-50	-8.615850e-47
Msa0599770	Msa1158670	0.851390	9.157270e-61	-8.615850e-47
Msa0599890	Msa1158670	0.815836	7.537127e-52	-8.615850e-47
Msa0843250	Msa1158670	0.810858	9.349872e-51	-8.615850e-47
Msa0846810	Msa1158670	0.808879	2.493603e-50	-8.615850e-47
Msa0848900	Msa1158670	0.815531	8.815621e-52	-8.615850e-47
Msa0876360	Msa1158670	0.805483	1.306179e-49	-8.615850e-47
Msa0876850	Msa1158670	-0.807575	4.726583e-50	-8.615850e-47
Msa0878880	Msa1158670	0.875161	3.832623e-68	-8.615850e-47
Msa0927670	Msa1158670	0.803451	3.464714e-49	-8.615850e-47
Msa0944550	Msa1158670	0.901322	3.011410e-78	-8.615850e-47
Msa0960160	Msa1158670	0.802553	5.312925e-49	-8.615850e-47
Msa0978700	Msa1158670	0.803436	3.488573e-49	-8.615850e-47
Msa0979100	Msa1158670	0.816635	4.996749e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1158670	MtrunA17_Chr7g0253401	80.620	258	5	3	1	258	1	213	6.99e-146	406
Msa1158670	MtrunA17_Chr6g0461331	49.219	256	99	8	1	256	1	225	3.35e-62	195

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1158670	AT5G18130.1	32.069	290	155	8	1	258	1	280	1.28e-36	131
Msa1158670	AT3G03870.2	34.892	278	149	14	1	258	1	266	7.52e-33	120
Msa1158670	AT5G18130.2	29.344	259	136	8	1	225	1	246	1.23e-19	85.5
Msa1158670	AT3G03870.1	31.120	241	135	13	1	222	1	229	6.44e-16	75.1

Find 73 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAACTTTCAATTCTATAATT+TGG	0.043382	7_4:+48093538	None:intergenic
CAAATTTGTTGACATGAAAT+TGG	0.182807	7_4:-48095178	Msa1158670:CDS
AACTTTCAATTCTATAATTT+GGG	0.200867	7_4:+48093539	None:intergenic
CCTCTACCACTACTAGATTT+TGG	0.209211	7_4:+48095150	None:intergenic
GGCTACTATGATAGTGTTTA+AGG	0.244273	7_4:-48093809	Msa1158670:exon
GTAAATTAAGTTACGGATTA+GGG	0.245606	7_4:-48093667	Msa1158670:three_prime_UTR
TTCTCCATGTTCTTCATTCT+AGG	0.255315	7_4:+48095084	None:intergenic
TGTAAATTAAGTTACGGATT+AGG	0.269378	7_4:-48093668	Msa1158670:three_prime_UTR
GTTGGAGCTATATGTTCTTT+TGG	0.285385	7_4:-48094973	Msa1158670:CDS
AATACAACAAAACACCTTAA+TGG	0.285946	7_4:-48095715	Msa1158670:five_prime_UTR
ACAATTTGTGTCTTGTTCTT+TGG	0.297991	7_4:-48094937	Msa1158670:CDS
GGAACATGGAAAATTTGTTT+TGG	0.322740	7_4:+48095339	None:intergenic
GTTGATTTGTGAATCAAAAT+AGG	0.327634	7_4:+48095639	None:intergenic
GAACATGGAGAATGAAAATA+AGG	0.328452	7_4:-48095073	Msa1158670:CDS
TCTTTCACCAGCCCTTCATT+TGG	0.338022	7_4:+48095285	None:intergenic
ATGATGGGTTCAAATTGAAT+TGG	0.356134	7_4:+48095318	None:intergenic
AAAGAAAAGTTGGCTTATAT+AGG	0.358046	7_4:+48095563	None:intergenic
TCGTGCCTTGATGAAACTTT+TGG	0.359313	7_4:-48093778	Msa1158670:three_prime_UTR
TAATACTACTTTGGTCTTGT+TGG	0.368197	7_4:+48094890	None:intergenic
AACAAGACCAAAGTAGTATT+AGG	0.368502	7_4:-48094888	Msa1158670:CDS
TTGGATGCTACAATTCAATT+AGG	0.371625	7_4:-48093759	Msa1158670:three_prime_UTR
ATTTGGAACCTTGTCAATGA+TGG	0.382204	7_4:+48095302	None:intergenic
TGGGTGATCCTTTCTGATGA+TGG	0.393897	7_4:-48095486	Msa1158670:CDS
CAAGATCTAAGCTACCATTA+AGG	0.402135	7_4:+48095701	None:intergenic
AGCAGAGCTCACATAACTTA+TGG	0.402607	7_4:-48093833	Msa1158670:CDS
AAGAAAAGTTGGCTTATATA+GGG	0.406356	7_4:+48095564	None:intergenic
TTGATCAGCTTCCTCTATCT+CGG	0.423812	7_4:+48095239	None:intergenic
GATTCAGATTCTTGTGAAGA+TGG	0.428584	7_4:-48095520	Msa1158670:exon
TCTTGAACCTAATACTACTT+TGG	0.449158	7_4:+48094881	None:intergenic
TGATCAGCTTCCTCTATCTC+GGG	0.452128	7_4:+48095240	None:intergenic
AATCCAAGTCCCCGAGATAG+AGG	0.452399	7_4:-48095250	Msa1158670:CDS
TTGTGGAAGTGGAGCTTGAC+AGG	0.453604	7_4:-48094997	Msa1158670:CDS
GAAGCATTTGCAGCAGTAAG+AGG	0.455785	7_4:-48093866	Msa1158670:CDS
ATTGACAAGGTTCCAAATGA+AGG	0.461067	7_4:-48095297	Msa1158670:CDS
AGAGTGATCAAAAGAAAAGT+TGG	0.476936	7_4:+48095553	None:intergenic
TTTGGAACCTTGTCAATGAT+GGG	0.478486	7_4:+48095303	None:intergenic
ATTCTATAATTTGGGGCAAG+TGG	0.499250	7_4:+48093547	None:intergenic
CAATGTAGATAAACAAATGA+GGG	0.501682	7_4:-48093700	Msa1158670:three_prime_UTR
CCAAAATCTAGTAGTGGTAG+AGG	0.509925	7_4:-48095150	Msa1158670:CDS
CAAGGTTCCAAATGAAGGGC+TGG	0.510901	7_4:-48095292	Msa1158670:CDS
AAGGAAGGAGAGGACATGAA+TGG	0.517989	7_4:-48095030	Msa1158670:CDS
AAGTGGAGCTTGACAGGAGT+TGG	0.528199	7_4:-48094991	Msa1158670:CDS
ATCTCCATGTCTGCATCAAG+TGG	0.532042	7_4:+48095117	None:intergenic
TCAATGTAGATAAACAAATG+AGG	0.538382	7_4:-48093701	Msa1158670:three_prime_UTR
TTCTCCACTTGATGCAGACA+TGG	0.549790	7_4:-48095121	Msa1158670:CDS
AGCATCCAAAAGTTTCATCA+AGG	0.552106	7_4:+48093773	None:intergenic
ATGTACTATGATGAGAAGGA+AGG	0.568648	7_4:-48095045	Msa1158670:CDS
TTAGGCACAATCTTCTATTG+TGG	0.569921	7_4:-48093741	Msa1158670:three_prime_UTR
ACTTTCAATTCTATAATTTG+GGG	0.579007	7_4:+48093540	None:intergenic
AAAAGTTGGCTTATATAGGG+AGG	0.587163	7_4:+48095567	None:intergenic
TTGACAAGGTTCCAAATGAA+GGG	0.592489	7_4:-48095296	Msa1158670:CDS
GTTCAAATTGAATTGGAACA+TGG	0.592625	7_4:+48095325	None:intergenic
AAACTCACTCGTCTTTGACA+AGG	0.596384	7_4:-48095421	Msa1158670:CDS
TGTTCTTTGGAAGTCAACAA+AGG	0.599769	7_4:-48094924	Msa1158670:CDS
TGTTATGTACTATGATGAGA+AGG	0.601438	7_4:-48095049	Msa1158670:CDS
GAAGGAGAGGACATGAATGG+TGG	0.601946	7_4:-48095027	Msa1158670:CDS
CCTAACAACTACAATTACAA+TGG	0.611060	7_4:+48093488	None:intergenic
CAAGATCTACACTGATGACA+AGG	0.613940	7_4:-48094863	Msa1158670:intron
TAAATTAAGTTACGGATTAG+GGG	0.619637	7_4:-48093666	Msa1158670:three_prime_UTR
ATTTGAACCCATCATTGACA+AGG	0.620426	7_4:-48095310	Msa1158670:CDS
AAAGAACAAGACACAAATTG+TGG	0.626637	7_4:+48094939	None:intergenic
GATCAGCTTCCTCTATCTCG+GGG	0.628424	7_4:+48095241	None:intergenic
CTATGATGAGAAGGAAGGAG+AGG	0.636243	7_4:-48095040	Msa1158670:CDS
GTTATGTGAGCTCTGCTCAG+TGG	0.637682	7_4:+48093839	None:intergenic
ATTGCAGAGGGTTAAGCAAG+TGG	0.641403	7_4:-48093912	Msa1158670:intron
ATCTCCTAGAATGAAGAACA+TGG	0.641567	7_4:-48095088	Msa1158670:CDS
GAGTCACCAAAATCTAGTAG+TGG	0.643722	7_4:-48095156	Msa1158670:CDS
GATTTGTGAATCAAAATAGG+TGG	0.659358	7_4:+48095642	None:intergenic
AGAGCTCACATAACTTATGG+TGG	0.659504	7_4:-48093830	Msa1158670:CDS
GTAGATAAACAAATGAGGGG+TGG	0.660529	7_4:-48093696	Msa1158670:three_prime_UTR
AATGTAGATAAACAAATGAG+GGG	0.663527	7_4:-48093699	Msa1158670:three_prime_UTR
GAAGATGGATATCAATGAGT+GGG	0.674672	7_4:-48095505	Msa1158670:exon
TGAAGATGGATATCAATGAG+TGG	0.698977	7_4:-48095506	Msa1158670:exon

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAGAAAAATGTATAAATAA+AGG	-	chr7_4:48094649-48094668	Msa1158670:intron	10.0%
!!	AAGAAAAATGTATAAATAAA+GGG	-	chr7_4:48094650-48094669	Msa1158670:intron	10.0%
!!!	ATATATGAGAATTTTAAAAT+AGG	-	chr7_4:48094843-48094862	Msa1158670:intron	10.0%
!!	TCAATTATAAATAATTTATG+AGG	-	chr7_4:48095006-48095025	Msa1158670:CDS	10.0%
!!	CAATTATAAATAATTTATGA+GGG	-	chr7_4:48095007-48095026	Msa1158670:CDS	10.0%
!!	CTTGTTAATAATTTATAATT+AGG	+	chr7_4:48095082-48095101	None:intergenic	10.0%
!!	TAAAAAATACTAGTAATAAA+AGG	+	chr7_4:48095612-48095631	None:intergenic	10.0%
!!	TAAGAAAAATGTATAAATAA+AGG	-	chr7_4:48094649-48094668	Msa1158670:intron	10.0%
!!	AAGAAAAATGTATAAATAAA+GGG	-	chr7_4:48094650-48094669	Msa1158670:intron	10.0%
!!!	ATATATGAGAATTTTAAAAT+AGG	-	chr7_4:48094843-48094862	Msa1158670:intron	10.0%
!!	TCAATTATAAATAATTTATG+AGG	-	chr7_4:48095006-48095025	Msa1158670:CDS	10.0%
!!	CAATTATAAATAATTTATGA+GGG	-	chr7_4:48095007-48095026	Msa1158670:CDS	10.0%
!!	CTTGTTAATAATTTATAATT+AGG	+	chr7_4:48095082-48095101	None:intergenic	10.0%
!!	TAAAAAATACTAGTAATAAA+AGG	+	chr7_4:48095612-48095631	None:intergenic	10.0%
!!	AGAAAAATGTATAAATAAAG+GGG	-	chr7_4:48094651-48094670	Msa1158670:intron	15.0%
!!	AAAGTGAAATATATTGAATT+GGG	-	chr7_4:48094674-48094693	Msa1158670:intron	15.0%
!!!	TTAAAAACTTTTTAGTTTAG+AGG	-	chr7_4:48095056-48095075	Msa1158670:CDS	15.0%
!!!	TTTAGAGATTTAAAAAGTAT+AGG	-	chr7_4:48095131-48095150	Msa1158670:CDS	15.0%
!!!	GTTTTATGTAAATTAAGTTA+CGG	-	chr7_4:48095577-48095596	Msa1158670:five_prime_UTR	15.0%
!!!	ATTACTAGTATTTTTTAGTT+TGG	-	chr7_4:48095615-48095634	Msa1158670:five_prime_UTR	15.0%
!!!	TTACTAGTATTTTTTAGTTT+GGG	-	chr7_4:48095616-48095635	Msa1158670:five_prime_UTR	15.0%
!!!	TTTTTTGGTATAAATACTTT+GGG	+	chr7_4:48095676-48095695	None:intergenic	15.0%
!!	AACTTTCAATTCTATAATTT+GGG	+	chr7_4:48095715-48095734	None:intergenic	15.0%
!!	AGAAAAATGTATAAATAAAG+GGG	-	chr7_4:48094651-48094670	Msa1158670:intron	15.0%
!!	AAAGTGAAATATATTGAATT+GGG	-	chr7_4:48094674-48094693	Msa1158670:intron	15.0%
!!!	TTAAAAACTTTTTAGTTTAG+AGG	-	chr7_4:48095056-48095075	Msa1158670:CDS	15.0%
!!!	TTTAGAGATTTAAAAAGTAT+AGG	-	chr7_4:48095131-48095150	Msa1158670:CDS	15.0%
!!!	GTTTTATGTAAATTAAGTTA+CGG	-	chr7_4:48095577-48095596	Msa1158670:five_prime_UTR	15.0%
!!!	ATTACTAGTATTTTTTAGTT+TGG	-	chr7_4:48095615-48095634	Msa1158670:five_prime_UTR	15.0%
!!!	TTACTAGTATTTTTTAGTTT+GGG	-	chr7_4:48095616-48095635	Msa1158670:five_prime_UTR	15.0%
!!!	TTTTTTGGTATAAATACTTT+GGG	+	chr7_4:48095676-48095695	None:intergenic	15.0%
!!	AACTTTCAATTCTATAATTT+GGG	+	chr7_4:48095715-48095734	None:intergenic	15.0%
!!	ACACTAGTATTAATTGAATA+TGG	+	chr7_4:48094571-48094590	None:intergenic	20.0%
!!	GAAAGTGAAATATATTGAAT+TGG	-	chr7_4:48094673-48094692	Msa1158670:intron	20.0%
!!	TTACAAATATTTAAATGTCC+AGG	+	chr7_4:48094964-48094983	None:intergenic	20.0%
!!	ACAATAATGTCATAGAAAAA+AGG	-	chr7_4:48095189-48095208	Msa1158670:CDS	20.0%
!!	CAATAATGTCATAGAAAAAA+GGG	-	chr7_4:48095190-48095209	Msa1158670:CDS	20.0%
!!	AATAATGTCATAGAAAAAAG+GGG	-	chr7_4:48095191-48095210	Msa1158670:CDS	20.0%
!!	TTATTCTTGAATAGTCAAAA+TGG	-	chr7_4:48095250-48095269	Msa1158670:CDS	20.0%
!!!	TTTTTGGTATAAATACTTTG+GGG	+	chr7_4:48095675-48095694	None:intergenic	20.0%
!!!	CTTTTTTGGTATAAATACTT+TGG	+	chr7_4:48095677-48095696	None:intergenic	20.0%
!!	ACTTTCAATTCTATAATTTG+GGG	+	chr7_4:48095714-48095733	None:intergenic	20.0%
!!	GAACTTTCAATTCTATAATT+TGG	+	chr7_4:48095716-48095735	None:intergenic	20.0%
!!	TCTAAAAAATGAATGAATGA+TGG	-	chr7_4:48095734-48095753	Msa1158670:five_prime_UTR	20.0%
!!	ACACTAGTATTAATTGAATA+TGG	+	chr7_4:48094571-48094590	None:intergenic	20.0%
!!	GAAAGTGAAATATATTGAAT+TGG	-	chr7_4:48094673-48094692	Msa1158670:intron	20.0%
!!	TTACAAATATTTAAATGTCC+AGG	+	chr7_4:48094964-48094983	None:intergenic	20.0%
!!	ACAATAATGTCATAGAAAAA+AGG	-	chr7_4:48095189-48095208	Msa1158670:CDS	20.0%
!!	CAATAATGTCATAGAAAAAA+GGG	-	chr7_4:48095190-48095209	Msa1158670:CDS	20.0%
!!	AATAATGTCATAGAAAAAAG+GGG	-	chr7_4:48095191-48095210	Msa1158670:CDS	20.0%
!!	TTATTCTTGAATAGTCAAAA+TGG	-	chr7_4:48095250-48095269	Msa1158670:CDS	20.0%
!!!	TTTTTGGTATAAATACTTTG+GGG	+	chr7_4:48095675-48095694	None:intergenic	20.0%
!!!	CTTTTTTGGTATAAATACTT+TGG	+	chr7_4:48095677-48095696	None:intergenic	20.0%
!!	ACTTTCAATTCTATAATTTG+GGG	+	chr7_4:48095714-48095733	None:intergenic	20.0%
!!	GAACTTTCAATTCTATAATT+TGG	+	chr7_4:48095716-48095735	None:intergenic	20.0%
!!	TCTAAAAAATGAATGAATGA+TGG	-	chr7_4:48095734-48095753	Msa1158670:five_prime_UTR	20.0%
!	AATACAACAAAACACCTTAA+TGG	-	chr7_4:48093536-48093555	Msa1158670:three_prime_UTR	25.0%
!!!	GTTGATTTGTGAATCAAAAT+AGG	+	chr7_4:48093615-48093634	None:intergenic	25.0%
!!	AAGAAAAGTTGGCTTATATA+GGG	+	chr7_4:48093690-48093709	None:intergenic	25.0%
!!	AAAGAAAAGTTGGCTTATAT+AGG	+	chr7_4:48093691-48093710	None:intergenic	25.0%
!!!	AATGGTTTTTGTTGATTTTG+GGG	+	chr7_4:48093871-48093890	None:intergenic	25.0%
!!!	CAATGGTTTTTGTTGATTTT+GGG	+	chr7_4:48093872-48093891	None:intergenic	25.0%
!!!	TCAATGGTTTTTGTTGATTT+TGG	+	chr7_4:48093873-48093892	None:intergenic	25.0%
!!	TTTTAATGGCTCAATATCAA+TGG	+	chr7_4:48093889-48093908	None:intergenic	25.0%
!!!	ATTTGTTTTGGCACTTTTAA+TGG	+	chr7_4:48093903-48093922	None:intergenic	25.0%
!!!	CAAATTTGTTGACATGAAAT+TGG	-	chr7_4:48094073-48094092	Msa1158670:intron	25.0%
!!	CTCTTACTATGTTTTATCTA+TGG	-	chr7_4:48094510-48094529	Msa1158670:intron	25.0%
!!	TTGAAATGACTCAGTTATTT+TGG	-	chr7_4:48094720-48094739	Msa1158670:intron	25.0%
!!!	TGAAATGACTCAGTTATTTT+GGG	-	chr7_4:48094721-48094740	Msa1158670:intron	25.0%
!	AAAATATTGTTTGAGCATCT+TGG	-	chr7_4:48094817-48094836	Msa1158670:intron	25.0%
!!	GAGATTTAAAAAGTATAGGA+TGG	-	chr7_4:48095135-48095154	Msa1158670:CDS	25.0%
!	ATAATGTCATAGAAAAAAGG+GGG	-	chr7_4:48095192-48095211	Msa1158670:CDS	25.0%
!	TCAATGTAGATAAACAAATG+AGG	-	chr7_4:48095550-48095569	Msa1158670:five_prime_UTR	25.0%
!	CAATGTAGATAAACAAATGA+GGG	-	chr7_4:48095551-48095570	Msa1158670:five_prime_UTR	25.0%
!	AATGTAGATAAACAAATGAG+GGG	-	chr7_4:48095552-48095571	Msa1158670:five_prime_UTR	25.0%
!	TGTAAATTAAGTTACGGATT+AGG	-	chr7_4:48095583-48095602	Msa1158670:five_prime_UTR	25.0%
!!	GTAAATTAAGTTACGGATTA+GGG	-	chr7_4:48095584-48095603	Msa1158670:five_prime_UTR	25.0%
!!!	TAAATTAAGTTACGGATTAG+GGG	-	chr7_4:48095585-48095604	Msa1158670:five_prime_UTR	25.0%
!!!	TTTTTAGTTTGGGAATTCAA+AGG	-	chr7_4:48095626-48095645	Msa1158670:five_prime_UTR	25.0%
!	AATACAACAAAACACCTTAA+TGG	-	chr7_4:48093536-48093555	Msa1158670:three_prime_UTR	25.0%
!!!	GTTGATTTGTGAATCAAAAT+AGG	+	chr7_4:48093615-48093634	None:intergenic	25.0%
!!	AAGAAAAGTTGGCTTATATA+GGG	+	chr7_4:48093690-48093709	None:intergenic	25.0%
!!	AAAGAAAAGTTGGCTTATAT+AGG	+	chr7_4:48093691-48093710	None:intergenic	25.0%
!!!	AATGGTTTTTGTTGATTTTG+GGG	+	chr7_4:48093871-48093890	None:intergenic	25.0%
!!!	CAATGGTTTTTGTTGATTTT+GGG	+	chr7_4:48093872-48093891	None:intergenic	25.0%
!!!	TCAATGGTTTTTGTTGATTT+TGG	+	chr7_4:48093873-48093892	None:intergenic	25.0%
!!	TTTTAATGGCTCAATATCAA+TGG	+	chr7_4:48093889-48093908	None:intergenic	25.0%
!!!	ATTTGTTTTGGCACTTTTAA+TGG	+	chr7_4:48093903-48093922	None:intergenic	25.0%
!!!	CAAATTTGTTGACATGAAAT+TGG	-	chr7_4:48094073-48094092	Msa1158670:intron	25.0%
!!	CTCTTACTATGTTTTATCTA+TGG	-	chr7_4:48094510-48094529	Msa1158670:intron	25.0%
!!	TTGAAATGACTCAGTTATTT+TGG	-	chr7_4:48094720-48094739	Msa1158670:intron	25.0%
!!!	TGAAATGACTCAGTTATTTT+GGG	-	chr7_4:48094721-48094740	Msa1158670:intron	25.0%
!	AAAATATTGTTTGAGCATCT+TGG	-	chr7_4:48094817-48094836	Msa1158670:intron	25.0%
!!	GAGATTTAAAAAGTATAGGA+TGG	-	chr7_4:48095135-48095154	Msa1158670:CDS	25.0%
!	ATAATGTCATAGAAAAAAGG+GGG	-	chr7_4:48095192-48095211	Msa1158670:CDS	25.0%
!	TCAATGTAGATAAACAAATG+AGG	-	chr7_4:48095550-48095569	Msa1158670:five_prime_UTR	25.0%
!	CAATGTAGATAAACAAATGA+GGG	-	chr7_4:48095551-48095570	Msa1158670:five_prime_UTR	25.0%
!	AATGTAGATAAACAAATGAG+GGG	-	chr7_4:48095552-48095571	Msa1158670:five_prime_UTR	25.0%
!	TGTAAATTAAGTTACGGATT+AGG	-	chr7_4:48095583-48095602	Msa1158670:five_prime_UTR	25.0%
!!	GTAAATTAAGTTACGGATTA+GGG	-	chr7_4:48095584-48095603	Msa1158670:five_prime_UTR	25.0%
!!!	TAAATTAAGTTACGGATTAG+GGG	-	chr7_4:48095585-48095604	Msa1158670:five_prime_UTR	25.0%
!!!	TTTTTAGTTTGGGAATTCAA+AGG	-	chr7_4:48095626-48095645	Msa1158670:five_prime_UTR	25.0%
!!	TGTTTTGTTGTATTGTAACG+TGG	+	chr7_4:48093530-48093549	None:intergenic	30.0%
	GATTTGTGAATCAAAATAGG+TGG	+	chr7_4:48093612-48093631	None:intergenic	30.0%
	AGAGTGATCAAAAGAAAAGT+TGG	+	chr7_4:48093701-48093720	None:intergenic	30.0%
!!	GGAACATGGAAAATTTGTTT+TGG	+	chr7_4:48093915-48093934	None:intergenic	30.0%
	GTTCAAATTGAATTGGAACA+TGG	+	chr7_4:48093929-48093948	None:intergenic	30.0%
!!	ATGATGGGTTCAAATTGAAT+TGG	+	chr7_4:48093936-48093955	None:intergenic	30.0%
	GAACATGGAGAATGAAAATA+AGG	-	chr7_4:48094178-48094197	Msa1158670:intron	30.0%
	TGTTATGTACTATGATGAGA+AGG	-	chr7_4:48094202-48094221	Msa1158670:intron	30.0%
	AAAGAACAAGACACAAATTG+TGG	+	chr7_4:48094315-48094334	None:intergenic	30.0%
!	ACAATTTGTGTCTTGTTCTT+TGG	-	chr7_4:48094314-48094333	Msa1158670:intron	30.0%
!!	TAATACTACTTTGGTCTTGT+TGG	+	chr7_4:48094364-48094383	None:intergenic	30.0%
	AACAAGACCAAAGTAGTATT+AGG	-	chr7_4:48094363-48094382	Msa1158670:intron	30.0%
	TCTTGAACCTAATACTACTT+TGG	+	chr7_4:48094373-48094392	None:intergenic	30.0%
	AACTAATCTTTGCGCAAAAT+CGG	-	chr7_4:48094464-48094483	Msa1158670:intron	30.0%
	AAGAGTTGACATAAAGATCT+TGG	+	chr7_4:48094495-48094514	None:intergenic	30.0%
	TCTATGGATAAGACTTGAAT+CGG	-	chr7_4:48094526-48094545	Msa1158670:intron	30.0%
	ATAAATGTGAAATGAGCCAA+GGG	+	chr7_4:48094629-48094648	None:intergenic	30.0%
	AATAAATGTGAAATGAGCCA+AGG	+	chr7_4:48094630-48094649	None:intergenic	30.0%
	AGTAAATGACTCAGTTAATC+CGG	-	chr7_4:48094755-48094774	Msa1158670:intron	30.0%
	ATTCAAAGCTGTTTACTTCA+GGG	+	chr7_4:48094936-48094955	None:intergenic	30.0%
!	TAAAAAGTATAGGATGGTGA+TGG	-	chr7_4:48095141-48095160	Msa1158670:CDS	30.0%
	ATTATTGTCCATCAAATGAC+AGG	+	chr7_4:48095177-48095196	None:intergenic	30.0%
	TTGAATAGTCAAAATGGATC+AGG	-	chr7_4:48095256-48095275	Msa1158670:CDS	30.0%
	TGCAATCACAATCACAATTA+AGG	+	chr7_4:48095325-48095344	None:intergenic	30.0%
	TTGGATGCTACAATTCAATT+AGG	-	chr7_4:48095492-48095511	Msa1158670:CDS	30.0%
!!	TGTTTTGTTGTATTGTAACG+TGG	+	chr7_4:48093530-48093549	None:intergenic	30.0%
	GATTTGTGAATCAAAATAGG+TGG	+	chr7_4:48093612-48093631	None:intergenic	30.0%
	AGAGTGATCAAAAGAAAAGT+TGG	+	chr7_4:48093701-48093720	None:intergenic	30.0%
!!	GGAACATGGAAAATTTGTTT+TGG	+	chr7_4:48093915-48093934	None:intergenic	30.0%
	GTTCAAATTGAATTGGAACA+TGG	+	chr7_4:48093929-48093948	None:intergenic	30.0%
!!	ATGATGGGTTCAAATTGAAT+TGG	+	chr7_4:48093936-48093955	None:intergenic	30.0%
	GAACATGGAGAATGAAAATA+AGG	-	chr7_4:48094178-48094197	Msa1158670:intron	30.0%
	TGTTATGTACTATGATGAGA+AGG	-	chr7_4:48094202-48094221	Msa1158670:intron	30.0%
	AAAGAACAAGACACAAATTG+TGG	+	chr7_4:48094315-48094334	None:intergenic	30.0%
!	ACAATTTGTGTCTTGTTCTT+TGG	-	chr7_4:48094314-48094333	Msa1158670:intron	30.0%
!!	TAATACTACTTTGGTCTTGT+TGG	+	chr7_4:48094364-48094383	None:intergenic	30.0%
	AACAAGACCAAAGTAGTATT+AGG	-	chr7_4:48094363-48094382	Msa1158670:intron	30.0%
	TCTTGAACCTAATACTACTT+TGG	+	chr7_4:48094373-48094392	None:intergenic	30.0%
	AACTAATCTTTGCGCAAAAT+CGG	-	chr7_4:48094464-48094483	Msa1158670:intron	30.0%
	AAGAGTTGACATAAAGATCT+TGG	+	chr7_4:48094495-48094514	None:intergenic	30.0%
	TCTATGGATAAGACTTGAAT+CGG	-	chr7_4:48094526-48094545	Msa1158670:intron	30.0%
	ATAAATGTGAAATGAGCCAA+GGG	+	chr7_4:48094629-48094648	None:intergenic	30.0%
	AATAAATGTGAAATGAGCCA+AGG	+	chr7_4:48094630-48094649	None:intergenic	30.0%
	AGTAAATGACTCAGTTAATC+CGG	-	chr7_4:48094755-48094774	Msa1158670:intron	30.0%
	ATTCAAAGCTGTTTACTTCA+GGG	+	chr7_4:48094936-48094955	None:intergenic	30.0%
!	TAAAAAGTATAGGATGGTGA+TGG	-	chr7_4:48095141-48095160	Msa1158670:CDS	30.0%
	ATTATTGTCCATCAAATGAC+AGG	+	chr7_4:48095177-48095196	None:intergenic	30.0%
	TTGAATAGTCAAAATGGATC+AGG	-	chr7_4:48095256-48095275	Msa1158670:CDS	30.0%
	TGCAATCACAATCACAATTA+AGG	+	chr7_4:48095325-48095344	None:intergenic	30.0%
	TTGGATGCTACAATTCAATT+AGG	-	chr7_4:48095492-48095511	Msa1158670:CDS	30.0%
	CAAGATCTAAGCTACCATTA+AGG	+	chr7_4:48093553-48093572	None:intergenic	35.0%
!	AAATAGGTGGCTTTTATGTG+TGG	+	chr7_4:48093599-48093618	None:intergenic	35.0%
!	AAAAGTTGGCTTATATAGGG+AGG	+	chr7_4:48093687-48093706	None:intergenic	35.0%
	GATTCAGATTCTTGTGAAGA+TGG	-	chr7_4:48093731-48093750	Msa1158670:three_prime_UTR	35.0%
	TGAAGATGGATATCAATGAG+TGG	-	chr7_4:48093745-48093764	Msa1158670:three_prime_UTR	35.0%
	GAAGATGGATATCAATGAGT+GGG	-	chr7_4:48093746-48093765	Msa1158670:three_prime_UTR	35.0%
	CAAAAAAGCCATCATCAGAA+AGG	+	chr7_4:48093776-48093795	None:intergenic	35.0%
!!!	TCTGATGATGGCTTTTTTGA+TGG	-	chr7_4:48093777-48093796	Msa1158670:three_prime_UTR	35.0%
	ATTTGAACCCATCATTGACA+AGG	-	chr7_4:48093941-48093960	Msa1158670:intron	35.0%
!	TTTGGAACCTTGTCAATGAT+GGG	+	chr7_4:48093951-48093970	None:intergenic	35.0%
!	ATTTGGAACCTTGTCAATGA+TGG	+	chr7_4:48093952-48093971	None:intergenic	35.0%
	ATTGACAAGGTTCCAAATGA+AGG	-	chr7_4:48093954-48093973	Msa1158670:intron	35.0%
	TTGACAAGGTTCCAAATGAA+GGG	-	chr7_4:48093955-48093974	Msa1158670:intron	35.0%
	ATCTCCTAGAATGAAGAACA+TGG	-	chr7_4:48094163-48094182	Msa1158670:intron	35.0%
	TTCTCCATGTTCTTCATTCT+AGG	+	chr7_4:48094170-48094189	None:intergenic	35.0%
	ATGTACTATGATGAGAAGGA+AGG	-	chr7_4:48094206-48094225	Msa1158670:intron	35.0%
!!!	TGAATGGTGGTTTTAACTTG+TGG	-	chr7_4:48094237-48094256	Msa1158670:intron	35.0%
!	GTTGGAGCTATATGTTCTTT+TGG	-	chr7_4:48094278-48094297	Msa1158670:intron	35.0%
!	TGTTCTTTGGAAGTCAACAA+AGG	-	chr7_4:48094327-48094346	Msa1158670:intron	35.0%
	GTAAATGACTCAGTTAATCC+GGG	-	chr7_4:48094756-48094775	Msa1158670:intron	35.0%
	GATTCAAAGCTGTTTACTTC+AGG	+	chr7_4:48094937-48094956	None:intergenic	35.0%
!	GAGAAATTCCTGTCATTTGA+TGG	-	chr7_4:48095166-48095185	Msa1158670:CDS	35.0%
!	AAAAAAGGGGGTGATTGTTT+TGG	-	chr7_4:48095204-48095223	Msa1158670:CDS	35.0%
	AATTGTGATTGTGATTGCAG+AGG	-	chr7_4:48095326-48095345	Msa1158670:CDS	35.0%
	ATTGTGATTGTGATTGCAGA+GGG	-	chr7_4:48095327-48095346	Msa1158670:CDS	35.0%
!	GGCTACTATGATAGTGTTTA+AGG	-	chr7_4:48095442-48095461	Msa1158670:CDS	35.0%
	AGCATCCAAAAGTTTCATCA+AGG	+	chr7_4:48095481-48095500	None:intergenic	35.0%
	TTAGGCACAATCTTCTATTG+TGG	-	chr7_4:48095510-48095529	Msa1158670:exon	35.0%
!!!	CAAGTGGCAACTTTCTTTTT+TGG	+	chr7_4:48095691-48095710	None:intergenic	35.0%
!	ATTCTATAATTTGGGGCAAG+TGG	+	chr7_4:48095707-48095726	None:intergenic	35.0%
	CAAGATCTAAGCTACCATTA+AGG	+	chr7_4:48093553-48093572	None:intergenic	35.0%
!	AAATAGGTGGCTTTTATGTG+TGG	+	chr7_4:48093599-48093618	None:intergenic	35.0%
!	AAAAGTTGGCTTATATAGGG+AGG	+	chr7_4:48093687-48093706	None:intergenic	35.0%
	GATTCAGATTCTTGTGAAGA+TGG	-	chr7_4:48093731-48093750	Msa1158670:three_prime_UTR	35.0%
	TGAAGATGGATATCAATGAG+TGG	-	chr7_4:48093745-48093764	Msa1158670:three_prime_UTR	35.0%
	GAAGATGGATATCAATGAGT+GGG	-	chr7_4:48093746-48093765	Msa1158670:three_prime_UTR	35.0%
	CAAAAAAGCCATCATCAGAA+AGG	+	chr7_4:48093776-48093795	None:intergenic	35.0%
!!!	TCTGATGATGGCTTTTTTGA+TGG	-	chr7_4:48093777-48093796	Msa1158670:three_prime_UTR	35.0%
	ATTTGAACCCATCATTGACA+AGG	-	chr7_4:48093941-48093960	Msa1158670:intron	35.0%
!	TTTGGAACCTTGTCAATGAT+GGG	+	chr7_4:48093951-48093970	None:intergenic	35.0%
!	ATTTGGAACCTTGTCAATGA+TGG	+	chr7_4:48093952-48093971	None:intergenic	35.0%
	ATTGACAAGGTTCCAAATGA+AGG	-	chr7_4:48093954-48093973	Msa1158670:intron	35.0%
	TTGACAAGGTTCCAAATGAA+GGG	-	chr7_4:48093955-48093974	Msa1158670:intron	35.0%
	ATCTCCTAGAATGAAGAACA+TGG	-	chr7_4:48094163-48094182	Msa1158670:intron	35.0%
	TTCTCCATGTTCTTCATTCT+AGG	+	chr7_4:48094170-48094189	None:intergenic	35.0%
	ATGTACTATGATGAGAAGGA+AGG	-	chr7_4:48094206-48094225	Msa1158670:intron	35.0%
!!!	TGAATGGTGGTTTTAACTTG+TGG	-	chr7_4:48094237-48094256	Msa1158670:intron	35.0%
!	GTTGGAGCTATATGTTCTTT+TGG	-	chr7_4:48094278-48094297	Msa1158670:intron	35.0%
!	TGTTCTTTGGAAGTCAACAA+AGG	-	chr7_4:48094327-48094346	Msa1158670:intron	35.0%
	GTAAATGACTCAGTTAATCC+GGG	-	chr7_4:48094756-48094775	Msa1158670:intron	35.0%
	GATTCAAAGCTGTTTACTTC+AGG	+	chr7_4:48094937-48094956	None:intergenic	35.0%
!	GAGAAATTCCTGTCATTTGA+TGG	-	chr7_4:48095166-48095185	Msa1158670:CDS	35.0%
!	AAAAAAGGGGGTGATTGTTT+TGG	-	chr7_4:48095204-48095223	Msa1158670:CDS	35.0%
	AATTGTGATTGTGATTGCAG+AGG	-	chr7_4:48095326-48095345	Msa1158670:CDS	35.0%
	ATTGTGATTGTGATTGCAGA+GGG	-	chr7_4:48095327-48095346	Msa1158670:CDS	35.0%
!	GGCTACTATGATAGTGTTTA+AGG	-	chr7_4:48095442-48095461	Msa1158670:CDS	35.0%
	AGCATCCAAAAGTTTCATCA+AGG	+	chr7_4:48095481-48095500	None:intergenic	35.0%
	TTAGGCACAATCTTCTATTG+TGG	-	chr7_4:48095510-48095529	Msa1158670:exon	35.0%
!!!	CAAGTGGCAACTTTCTTTTT+TGG	+	chr7_4:48095691-48095710	None:intergenic	35.0%
!	ATTCTATAATTTGGGGCAAG+TGG	+	chr7_4:48095707-48095726	None:intergenic	35.0%
	AAACTCACTCGTCTTTGACA+AGG	-	chr7_4:48093830-48093849	Msa1158670:CDS	40.0%
!!!	GGTTTTTGTTGATTTTGGGG+AGG	+	chr7_4:48093868-48093887	None:intergenic	40.0%
	TTGATCAGCTTCCTCTATCT+CGG	+	chr7_4:48094015-48094034	None:intergenic	40.0%
	GAGTCACCAAAATCTAGTAG+TGG	-	chr7_4:48094095-48094114	Msa1158670:intron	40.0%
!	CCTCTACCACTACTAGATTT+TGG	+	chr7_4:48094104-48094123	None:intergenic	40.0%
	CCAAAATCTAGTAGTGGTAG+AGG	-	chr7_4:48094101-48094120	Msa1158670:intron	40.0%
!!!	GTGGTTTTAACTTGTGGAAG+TGG	-	chr7_4:48094243-48094262	Msa1158670:intron	40.0%
	CAAGATCTACACTGATGACA+AGG	-	chr7_4:48094388-48094407	Msa1158670:intron	40.0%
	CTCAATTAATTCAGGACGGA+GGG	+	chr7_4:48094606-48094625	None:intergenic	40.0%
	AGGGCTCAATTAATTCAGGA+CGG	+	chr7_4:48094610-48094629	None:intergenic	40.0%
	TCCTGAATTAATTGAGCCCT+TGG	-	chr7_4:48094610-48094629	Msa1158670:intron	40.0%
!!	AACAGCTTTGAATCAGATCC+TGG	-	chr7_4:48094943-48094962	Msa1158670:CDS	40.0%
	AGCAGAGCTCACATAACTTA+TGG	-	chr7_4:48095418-48095437	Msa1158670:CDS	40.0%
	AGAGCTCACATAACTTATGG+TGG	-	chr7_4:48095421-48095440	Msa1158670:CDS	40.0%
!	TCGTGCCTTGATGAAACTTT+TGG	-	chr7_4:48095473-48095492	Msa1158670:CDS	40.0%
	GTAGATAAACAAATGAGGGG+TGG	-	chr7_4:48095555-48095574	Msa1158670:five_prime_UTR	40.0%
	AAACTCACTCGTCTTTGACA+AGG	-	chr7_4:48093830-48093849	Msa1158670:CDS	40.0%
!!!	GGTTTTTGTTGATTTTGGGG+AGG	+	chr7_4:48093868-48093887	None:intergenic	40.0%
	TTGATCAGCTTCCTCTATCT+CGG	+	chr7_4:48094015-48094034	None:intergenic	40.0%
	GAGTCACCAAAATCTAGTAG+TGG	-	chr7_4:48094095-48094114	Msa1158670:intron	40.0%
!	CCTCTACCACTACTAGATTT+TGG	+	chr7_4:48094104-48094123	None:intergenic	40.0%
	CCAAAATCTAGTAGTGGTAG+AGG	-	chr7_4:48094101-48094120	Msa1158670:intron	40.0%
!!!	GTGGTTTTAACTTGTGGAAG+TGG	-	chr7_4:48094243-48094262	Msa1158670:intron	40.0%
	CAAGATCTACACTGATGACA+AGG	-	chr7_4:48094388-48094407	Msa1158670:intron	40.0%
	CTCAATTAATTCAGGACGGA+GGG	+	chr7_4:48094606-48094625	None:intergenic	40.0%
	AGGGCTCAATTAATTCAGGA+CGG	+	chr7_4:48094610-48094629	None:intergenic	40.0%
	TCCTGAATTAATTGAGCCCT+TGG	-	chr7_4:48094610-48094629	Msa1158670:intron	40.0%
!!	AACAGCTTTGAATCAGATCC+TGG	-	chr7_4:48094943-48094962	Msa1158670:CDS	40.0%
	AGCAGAGCTCACATAACTTA+TGG	-	chr7_4:48095418-48095437	Msa1158670:CDS	40.0%
	AGAGCTCACATAACTTATGG+TGG	-	chr7_4:48095421-48095440	Msa1158670:CDS	40.0%
!	TCGTGCCTTGATGAAACTTT+TGG	-	chr7_4:48095473-48095492	Msa1158670:CDS	40.0%
	GTAGATAAACAAATGAGGGG+TGG	-	chr7_4:48095555-48095574	Msa1158670:five_prime_UTR	40.0%
	TGGGTGATCCTTTCTGATGA+TGG	-	chr7_4:48093765-48093784	Msa1158670:three_prime_UTR	45.0%
	TCTTTCACCAGCCCTTCATT+TGG	+	chr7_4:48093969-48093988	None:intergenic	45.0%
	TGATCAGCTTCCTCTATCTC+GGG	+	chr7_4:48094014-48094033	None:intergenic	45.0%
	TTCTCCACTTGATGCAGACA+TGG	-	chr7_4:48094130-48094149	Msa1158670:intron	45.0%
	ATCTCCATGTCTGCATCAAG+TGG	+	chr7_4:48094137-48094156	None:intergenic	45.0%
	CTATGATGAGAAGGAAGGAG+AGG	-	chr7_4:48094211-48094230	Msa1158670:intron	45.0%
	AAGGAAGGAGAGGACATGAA+TGG	-	chr7_4:48094221-48094240	Msa1158670:intron	45.0%
	GCTCAATTAATTCAGGACGG+AGG	+	chr7_4:48094607-48094626	None:intergenic	45.0%
	GCCAAGGGCTCAATTAATTC+AGG	+	chr7_4:48094614-48094633	None:intergenic	45.0%
	ATGACTCAGTTAATCCGGGA+CGG	-	chr7_4:48094760-48094779	Msa1158670:intron	45.0%
	ATTGCAGAGGGTTAAGCAAG+TGG	-	chr7_4:48095339-48095358	Msa1158670:CDS	45.0%
!	GAAGCATTTGCAGCAGTAAG+AGG	-	chr7_4:48095385-48095404	Msa1158670:CDS	45.0%
	TGGGTGATCCTTTCTGATGA+TGG	-	chr7_4:48093765-48093784	Msa1158670:three_prime_UTR	45.0%
	TCTTTCACCAGCCCTTCATT+TGG	+	chr7_4:48093969-48093988	None:intergenic	45.0%
	TGATCAGCTTCCTCTATCTC+GGG	+	chr7_4:48094014-48094033	None:intergenic	45.0%
	TTCTCCACTTGATGCAGACA+TGG	-	chr7_4:48094130-48094149	Msa1158670:intron	45.0%
	ATCTCCATGTCTGCATCAAG+TGG	+	chr7_4:48094137-48094156	None:intergenic	45.0%
	CTATGATGAGAAGGAAGGAG+AGG	-	chr7_4:48094211-48094230	Msa1158670:intron	45.0%
	AAGGAAGGAGAGGACATGAA+TGG	-	chr7_4:48094221-48094240	Msa1158670:intron	45.0%
	GCTCAATTAATTCAGGACGG+AGG	+	chr7_4:48094607-48094626	None:intergenic	45.0%
	GCCAAGGGCTCAATTAATTC+AGG	+	chr7_4:48094614-48094633	None:intergenic	45.0%
	ATGACTCAGTTAATCCGGGA+CGG	-	chr7_4:48094760-48094779	Msa1158670:intron	45.0%
	ATTGCAGAGGGTTAAGCAAG+TGG	-	chr7_4:48095339-48095358	Msa1158670:CDS	45.0%
!	GAAGCATTTGCAGCAGTAAG+AGG	-	chr7_4:48095385-48095404	Msa1158670:CDS	45.0%
	CAAGGTTCCAAATGAAGGGC+TGG	-	chr7_4:48093959-48093978	Msa1158670:intron	50.0%
	AATCCAAGTCCCCGAGATAG+AGG	-	chr7_4:48094001-48094020	Msa1158670:intron	50.0%
	GATCAGCTTCCTCTATCTCG+GGG	+	chr7_4:48094013-48094032	None:intergenic	50.0%
	GAAGGAGAGGACATGAATGG+TGG	-	chr7_4:48094224-48094243	Msa1158670:intron	50.0%
	TTGTGGAAGTGGAGCTTGAC+AGG	-	chr7_4:48094254-48094273	Msa1158670:intron	50.0%
	AAGTGGAGCTTGACAGGAGT+TGG	-	chr7_4:48094260-48094279	Msa1158670:intron	50.0%
	AAATACTACTCCCTCCGTCC+CGG	+	chr7_4:48094777-48094796	None:intergenic	50.0%
	GTTATGTGAGCTCTGCTCAG+TGG	+	chr7_4:48095415-48095434	None:intergenic	50.0%
	CAAGGTTCCAAATGAAGGGC+TGG	-	chr7_4:48093959-48093978	Msa1158670:intron	50.0%
	AATCCAAGTCCCCGAGATAG+AGG	-	chr7_4:48094001-48094020	Msa1158670:intron	50.0%
	GATCAGCTTCCTCTATCTCG+GGG	+	chr7_4:48094013-48094032	None:intergenic	50.0%
	GAAGGAGAGGACATGAATGG+TGG	-	chr7_4:48094224-48094243	Msa1158670:intron	50.0%
	TTGTGGAAGTGGAGCTTGAC+AGG	-	chr7_4:48094254-48094273	Msa1158670:intron	50.0%
	AAGTGGAGCTTGACAGGAGT+TGG	-	chr7_4:48094260-48094279	Msa1158670:intron	50.0%
	AAATACTACTCCCTCCGTCC+CGG	+	chr7_4:48094777-48094796	None:intergenic	50.0%
	GTTATGTGAGCTCTGCTCAG+TGG	+	chr7_4:48095415-48095434	None:intergenic	50.0%
	CTTCCTCTATCTCGGGGACT+TGG	+	chr7_4:48094007-48094026	None:intergenic	55.0%
	ACTCAGTTAATCCGGGACGG+AGG	-	chr7_4:48094763-48094782	Msa1158670:intron	55.0%
	CTCAGTTAATCCGGGACGGA+GGG	-	chr7_4:48094764-48094783	Msa1158670:intron	55.0%
	CTTCCTCTATCTCGGGGACT+TGG	+	chr7_4:48094007-48094026	None:intergenic	55.0%
	ACTCAGTTAATCCGGGACGG+AGG	-	chr7_4:48094763-48094782	Msa1158670:intron	55.0%
	CTCAGTTAATCCGGGACGGA+GGG	-	chr7_4:48094764-48094783	Msa1158670:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_4	gene	48093499	48095774	48093499	ID=Msa1158670;Name=Msa1158670
chr7_4	mRNA	48093499	48095774	48093499	ID=Msa1158670-mRNA-1;Parent=Msa1158670;Name=Msa1158670-mRNA-1;_AED=0.00;_eAED=0.00;_QI=251\|1\|1\|1\|1\|1\|2\|312\|258
chr7_4	exon	48093499	48093927	48093499	ID=Msa1158670-mRNA-1:exon:12962;Parent=Msa1158670-mRNA-1
chr7_4	exon	48094864	48095774	48094864	ID=Msa1158670-mRNA-1:exon:12961;Parent=Msa1158670-mRNA-1
chr7_4	five_prime_UTR	48095524	48095774	48095524	ID=Msa1158670-mRNA-1:five_prime_utr;Parent=Msa1158670-mRNA-1
chr7_4	CDS	48094864	48095523	48094864	ID=Msa1158670-mRNA-1:cds;Parent=Msa1158670-mRNA-1
chr7_4	CDS	48093811	48093927	48093811	ID=Msa1158670-mRNA-1:cds;Parent=Msa1158670-mRNA-1
chr7_4	three_prime_UTR	48093499	48093810	48093499	ID=Msa1158670-mRNA-1:three_prime_utr;Parent=Msa1158670-mRNA-1

Gene Sequence

>Msa1158670

ATGGATATCAATGAGTGGGTGATCCTTTCTGATGATGGCTTTTTTGATGGTGATGAGAAGCAAATTTTCTTAGATAAAAGAAACTCACTCGTCTTTGACAAGGATTACTTTTGCACCTCCCCAAAATCAACAAAAACCATTGATATTGAGCCATTAAAAGTGCCAAAACAAATTTTCCATGTTCCAATTCAATTTGAACCCATCATTGACAAGGTTCCAAATGAAGGGCTGGTGAAAGAAAACACTGAAAAAATCCAAGTCCCCGAGATAGAGGAAGCTGATCAAGAGAGTGTTTCACAAGTTTTCTTTCATATAAAAGAGAACAAATTTGTTGACATGAAATTGGAGTCACCAAAATCTAGTAGTGGTAGAGGATTATTTTCTCCACTTGATGCAGACATGGAGATGATGACATCTCCTAGAATGAAGAACATGGAGAATGAAAATAAGGTTGTTATGTACTATGATGAGAAGGAAGGAGAGGACATGAATGGTGGTTTTAACTTGTGGAAGTGGAGCTTGACAGGAGTTGGAGCTATATGTTCTTTTGGTGTTGCTGCTGCCACAATTTGTGTCTTGTTCTTTGGAAGTCAACAAAGGAACAACAAACTCCAACAAGACCAAAGTAGTATTAGGTTCAAGATCTACACTGATGACAAGAGGGTTAAGCAAGTGGTACAACATGCAACAAAATTGAATGAAGCATTTGCAGCAGTAAGAGGTGTTCCACTGAGCAGAGCTCACATAACTTATGGTGGCTACTATGATAGTGTTTAA

Protein sequence

>Msa1158670

MDINEWVILSDDGFFDGDEKQIFLDKRNSLVFDKDYFCTSPKSTKTIDIEPLKVPKQIFHVPIQFEPIIDKVPNEGLVKENTEKIQVPEIEEADQESVSQVFFHIKENKFVDMKLESPKSSSGRGLFSPLDADMEMMTSPRMKNMENENKVVMYYDEKEGEDMNGGFNLWKWSLTGVGAICSFGVAAATICVLFFGSQQRNNKLQQDQSSIRFKIYTDDKRVKQVVQHATKLNEAFAAVRGVPLSRAHITYGGYYDSV*