Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301680 | XP_013465355.1 | 96.376 | 607 | 5 | 2 | 1 | 607 | 1 | 590 | 0.0 | 1201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301680 | sp|Q9FJH6|AB1F_ARATH | 82.807 | 570 | 86 | 1 | 38 | 607 | 38 | 595 | 0.0 | 1004 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0222340 | Msa0301680 | 0.958218 | 4.059399e-116 | -8.615850e-47 |
| Msa0263840 | Msa0301680 | 0.993006 | 7.698329e-197 | -8.615850e-47 |
| Msa0276770 | Msa0301680 | 0.802387 | 5.746311e-49 | -8.615850e-47 |
| Msa0301680 | Msa0339070 | 0.979585 | 2.711030e-148 | -8.615850e-47 |
| Msa0301680 | Msa0344530 | 0.801880 | 7.307872e-49 | -8.615850e-47 |
| Msa0301680 | Msa0409080 | 0.802685 | 4.988589e-49 | -8.615850e-47 |
| Msa0301680 | Msa0453890 | 0.803335 | 3.661876e-49 | -8.615850e-47 |
| Msa0301680 | Msa0477130 | -0.808728 | 2.686106e-50 | -8.615850e-47 |
| Msa0301680 | Msa0698360 | 0.810665 | 1.029333e-50 | -8.615850e-47 |
| Msa0301680 | Msa0749930 | 0.807603 | 4.662533e-50 | -8.615850e-47 |
| Msa0301680 | Msa0807050 | 0.827993 | 1.150570e-54 | -8.615850e-47 |
| Msa0301680 | Msa0830420 | 0.808204 | 3.473820e-50 | -8.615850e-47 |
| Msa0301680 | Msa0832990 | 0.827699 | 1.354497e-54 | -8.615850e-47 |
| Msa0301680 | Msa0944550 | 0.832209 | 1.077208e-55 | -8.615850e-47 |
| Msa0301680 | Msa1031810 | 0.816033 | 6.813459e-52 | -8.615850e-47 |
| Msa0301680 | Msa1070850 | 0.830093 | 3.566327e-55 | -8.615850e-47 |
| Msa0301680 | Msa1118110 | 0.801183 | 1.015219e-48 | -8.615850e-47 |
| Msa0301680 | Msa1118750 | 0.838350 | 3.029362e-57 | -8.615850e-47 |
| Msa0301680 | Msa1132950 | 0.829088 | 6.259770e-55 | -8.615850e-47 |
| Msa0301680 | Msa1158670 | 0.822206 | 2.681871e-53 | -8.615850e-47 |
| Msa0301680 | Msa1437680 | 0.812718 | 3.681740e-51 | -8.615850e-47 |
| Msa0301680 | Msa1454860 | 0.810254 | 1.263000e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301680 | MtrunA17_Chr2g0327291 | 96.376 | 607 | 5 | 2 | 1 | 607 | 1 | 590 | 0.0 | 1201 |
| Msa0301680 | MtrunA17_Chr4g0028471 | 87.676 | 568 | 58 | 1 | 40 | 607 | 35 | 590 | 0.0 | 1050 |
| Msa0301680 | MtrunA17_Chr3g0119921 | 42.430 | 535 | 283 | 6 | 83 | 596 | 177 | 707 | 2.00e-150 | 450 |
| Msa0301680 | MtrunA17_Chr7g0220881 | 40.472 | 551 | 287 | 6 | 83 | 596 | 156 | 702 | 2.41e-145 | 437 |
| Msa0301680 | MtrunA17_Chr1g0181461 | 42.000 | 550 | 280 | 10 | 83 | 596 | 2 | 548 | 2.60e-144 | 429 |
| Msa0301680 | MtrunA17_Chr8g0371361 | 41.530 | 549 | 282 | 7 | 83 | 596 | 156 | 700 | 3.77e-144 | 434 |
| Msa0301680 | MtrunA17_Chr3g0129301 | 30.755 | 530 | 343 | 8 | 82 | 591 | 107 | 632 | 2.65e-69 | 238 |
| Msa0301680 | MtrunA17_Chr3g0129301 | 26.531 | 245 | 147 | 4 | 83 | 323 | 435 | 650 | 3.34e-19 | 92.0 |
| Msa0301680 | MtrunA17_Chr4g0061601 | 26.122 | 245 | 128 | 9 | 396 | 605 | 391 | 617 | 6.01e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301680 | AT5G60790.1 | 82.807 | 570 | 86 | 1 | 38 | 607 | 38 | 595 | 0.0 | 1004 |
| Msa0301680 | AT3G54540.2 | 43.447 | 557 | 269 | 10 | 83 | 600 | 165 | 714 | 1.42e-153 | 459 |
| Msa0301680 | AT3G54540.1 | 43.447 | 557 | 269 | 10 | 83 | 600 | 165 | 714 | 1.42e-153 | 459 |
| Msa0301680 | AT1G64550.1 | 43.284 | 536 | 278 | 6 | 83 | 596 | 177 | 708 | 1.49e-151 | 454 |
| Msa0301680 | AT5G64840.1 | 31.191 | 529 | 342 | 7 | 82 | 591 | 99 | 624 | 1.46e-72 | 246 |
| Msa0301680 | AT5G64840.1 | 27.586 | 232 | 137 | 5 | 83 | 311 | 427 | 630 | 3.89e-17 | 85.9 |
| Msa0301680 | AT5G09930.1 | 30.769 | 533 | 345 | 8 | 83 | 595 | 86 | 614 | 3.19e-70 | 240 |
| Msa0301680 | AT5G09930.1 | 24.268 | 239 | 136 | 4 | 83 | 311 | 413 | 616 | 4.85e-15 | 79.0 |
Find 184 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCCCAAGATTTCCTTAA+TGG | 0.133001 | 2_3:+58152605 | Msa0301680:CDS |
| ATTTATGATGCTTATCAATT+TGG | 0.178671 | 2_3:+58153806 | Msa0301680:three_prime_UTR |
| AGGTCATAATCGTGACATTT+TGG | 0.184738 | 2_3:-58153626 | None:intergenic |
| GAAGAAATTTGACCGTATTT+TGG | 0.193189 | 2_3:+58152571 | Msa0301680:CDS |
| GAACATGCGAACCTGGAATT+TGG | 0.243453 | 2_3:-58149557 | None:intergenic |
| ATCCTTTCTTCCTCATTTCC+AGG | 0.254068 | 2_3:-58153217 | None:intergenic |
| CGCCACCGCTTCATCGAAAA+AGG | 0.264820 | 2_3:+58149751 | Msa0301680:CDS |
| TCTGAGTTGGAGCTAAATTA+TGG | 0.275758 | 2_3:+58151173 | Msa0301680:CDS |
| TCCTCTCTCTAGGGATATTC+AGG | 0.283104 | 2_3:+58149862 | Msa0301680:CDS |
| CTTCTCACGTTCCAAATTCC+AGG | 0.293879 | 2_3:+58149546 | Msa0301680:five_prime_UTR |
| AGAGCAGCTATTGGGAAGTT+TGG | 0.294434 | 2_3:+58153241 | Msa0301680:CDS |
| GGAGAAAGAAGCTGAAATTC+TGG | 0.295585 | 2_3:+58151487 | Msa0301680:CDS |
| CCCACCTGTTCTCCAGTTTG+TGG | 0.300584 | 2_3:+58152934 | Msa0301680:CDS |
| TGACGAGGAAAGGTTGAAAT+TGG | 0.301469 | 2_3:+58151466 | Msa0301680:CDS |
| AAGGAATACATTGCACGATT+TGG | 0.328195 | 2_3:+58152773 | Msa0301680:CDS |
| GATAGTGTTGCTAACGGAAT+TGG | 0.333903 | 2_3:+58149791 | Msa0301680:CDS |
| ATCAGGTGGCCCATGAGATA+TGG | 0.335843 | 2_3:+58153482 | Msa0301680:CDS |
| GGTGATTTGGTTCCTTTAGA+TGG | 0.339333 | 2_3:+58153088 | Msa0301680:CDS |
| GAAGCTTATGACAGGTGATT+TGG | 0.339539 | 2_3:+58153075 | Msa0301680:CDS |
| CCAACATGATACATTGATAA+TGG | 0.340708 | 2_3:+58153844 | Msa0301680:three_prime_UTR |
| TTCTTGTAGATGAGATTATC+AGG | 0.347827 | 2_3:-58152977 | None:intergenic |
| CAGATGGGAAGGTGATATTA+TGG | 0.351979 | 2_3:+58153528 | Msa0301680:CDS |
| TATTTGTGCAGACACCATTA+AGG | 0.358821 | 2_3:-58152619 | None:intergenic |
| CAGTTTGTGGAGGTGACATT+TGG | 0.361508 | 2_3:+58152947 | Msa0301680:CDS |
| GAATGGTTGGGTTCATAAAC+AGG | 0.363149 | 2_3:-58151791 | None:intergenic |
| CGTGCTCTTCCCAGCTCCAT+TGG | 0.366938 | 2_3:-58153047 | None:intergenic |
| TGTTCAGACACGTGCTGAAC+TGG | 0.372673 | 2_3:+58152697 | Msa0301680:CDS |
| TGCTTATCAATTTGGTTGCT+TGG | 0.375022 | 2_3:+58153814 | Msa0301680:three_prime_UTR |
| GGGATACCAAGGTGATTTGT+AGG | 0.378062 | 2_3:-58151828 | None:intergenic |
| ATGGGATGGTGGCATGGTTC+TGG | 0.379571 | 2_3:+58153435 | Msa0301680:CDS |
| CTCTGACATGTCTGCGTTGG+AGG | 0.384118 | 2_3:+58151430 | Msa0301680:CDS |
| AGGTTTGGTTTGGTATATAG+AGG | 0.385993 | 2_3:-58149443 | None:intergenic |
| GTGCAATGCGAAGGTGATTA+TGG | 0.388699 | 2_3:-58153123 | None:intergenic |
| TTTGTTCCCATCCTCTCTCT+AGG | 0.391658 | 2_3:+58149852 | Msa0301680:CDS |
| CCATCCGATAAATTTCTCAT+AGG | 0.393413 | 2_3:-58153289 | None:intergenic |
| ATAGTGTTGCTAACGGAATT+GGG | 0.394864 | 2_3:+58149792 | Msa0301680:CDS |
| TGTCAGAGGCTTCAATTTCC+CGG | 0.399457 | 2_3:-58151415 | None:intergenic |
| TCGATATCTAAATGATTAGT+TGG | 0.399920 | 2_3:-58153379 | None:intergenic |
| ATTGTAGTACTTGTTTCCTC+TGG | 0.408831 | 2_3:+58153904 | Msa0301680:three_prime_UTR |
| GAAAGGATGAGAGCAGCTAT+TGG | 0.409176 | 2_3:+58153232 | Msa0301680:CDS |
| TCTACGCTACTTACAGCAAT+AGG | 0.411200 | 2_3:+58151344 | Msa0301680:CDS |
| GTGAATATAATCAAATGAAA+TGG | 0.414753 | 2_3:+58153703 | Msa0301680:three_prime_UTR |
| CTGGTTGGACCCAATGGAGC+TGG | 0.414943 | 2_3:+58153037 | Msa0301680:CDS |
| TCTACAAGAACATTGACTTC+GGG | 0.415122 | 2_3:+58152990 | Msa0301680:CDS |
| ACCTCCACAAACTGGAGAAC+AGG | 0.416071 | 2_3:-58152938 | None:intergenic |
| TTCAGACGTTATGGTTTGCT+TGG | 0.417788 | 2_3:+58151302 | Msa0301680:intron |
| CATAATATCACCTTCCCATC+TGG | 0.420837 | 2_3:-58153527 | None:intergenic |
| ATATCCATGTGGTCTGGAAT+AGG | 0.420995 | 2_3:-58151380 | None:intergenic |
| TTTGTTGAGGTGGTGAGGTT+TGG | 0.424164 | 2_3:-58149458 | None:intergenic |
| AGACACCATTAAGGAAATCT+TGG | 0.427382 | 2_3:-58152610 | None:intergenic |
| GATGCCTATGAGAAATTTAT+CGG | 0.431894 | 2_3:+58153285 | Msa0301680:CDS |
| TGGATATTTATCACCTTAGC+CGG | 0.433721 | 2_3:+58151396 | Msa0301680:CDS |
| CCCACCTGTACTGCTTCATC+TGG | 0.435159 | 2_3:-58152727 | None:intergenic |
| AATCACCTGTCATAAGCTTC+AGG | 0.435857 | 2_3:-58153072 | None:intergenic |
| TGAGGTGGTGAGGTTTGGTT+TGG | 0.436297 | 2_3:-58149453 | None:intergenic |
| ATTGGGAAGTTTGGATTGTC+GGG | 0.439397 | 2_3:+58153250 | Msa0301680:CDS |
| GGGTCCAACCAGAGCAATCC+TGG | 0.440264 | 2_3:-58153026 | None:intergenic |
| TGCAGTGGTGATGAGGAGTT+AGG | 0.448031 | 2_3:-58149508 | None:intergenic |
| ATGACCTTGTATTACAATGT+AGG | 0.448368 | 2_3:+58153642 | Msa0301680:three_prime_UTR |
| TCTTTATCAGTTACTTTCCA+TGG | 0.449572 | 2_3:+58151131 | Msa0301680:CDS |
| TCCTTTCTTCCTCATTTCCA+GGG | 0.450321 | 2_3:-58153216 | None:intergenic |
| GACTCCAGGATTGCTCTGGT+TGG | 0.450992 | 2_3:+58153022 | Msa0301680:CDS |
| CAAATGTCACCTCCACAAAC+TGG | 0.453285 | 2_3:-58152946 | None:intergenic |
| CTTGAGGTGGATTTCTCTCA+TGG | 0.456181 | 2_3:+58153681 | Msa0301680:three_prime_UTR |
| GGATTTCAAGCTGCACCTAA+AGG | 0.456483 | 2_3:+58153549 | Msa0301680:CDS |
| TATTGGGAAGTTTGGATTGT+CGG | 0.456601 | 2_3:+58153249 | Msa0301680:CDS |
| TAGCCGAGGCATTGAATGAA+TGG | 0.457369 | 2_3:+58153416 | Msa0301680:CDS |
| AAAGGATGAGAGCAGCTATT+GGG | 0.460692 | 2_3:+58153233 | Msa0301680:CDS |
| TTTCTGGTGGATGGAGAATG+AGG | 0.462028 | 2_3:+58151751 | Msa0301680:CDS |
| CAGCAAGTGAGGCTGTCTAT+AGG | 0.465288 | 2_3:-58153344 | None:intergenic |
| ACCCTGGAAATGAGGAAGAA+AGG | 0.466407 | 2_3:+58153215 | Msa0301680:CDS |
| GTGCTCTTCCCAGCTCCATT+GGG | 0.466440 | 2_3:-58153046 | None:intergenic |
| TTGTTCCCATCCTCTCTCTA+GGG | 0.473216 | 2_3:+58149853 | Msa0301680:CDS |
| GAGAAAGAAGCTGAAATTCT+GGG | 0.473580 | 2_3:+58151488 | Msa0301680:CDS |
| TTTGGTTCCTTTAGATGGCA+TGG | 0.476128 | 2_3:+58153093 | Msa0301680:CDS |
| TCAGGTGGCCCATGAGATAT+GGG | 0.476686 | 2_3:+58153483 | Msa0301680:CDS |
| AGGCTTCAATTTCCCGGCTA+AGG | 0.478428 | 2_3:-58151409 | None:intergenic |
| TGATAAATATCCATGTGGTC+TGG | 0.478691 | 2_3:-58151386 | None:intergenic |
| TCTTCTCTTTACTCTGAGCT+TGG | 0.478713 | 2_3:-58152820 | None:intergenic |
| AGCTGAAATTCTGGGAGCAC+AGG | 0.481031 | 2_3:+58151496 | Msa0301680:CDS |
| AGCTATAGAACATGCGAACC+TGG | 0.483922 | 2_3:-58149564 | None:intergenic |
| TTTAGACTCCAGGATTGCTC+TGG | 0.486928 | 2_3:+58153018 | Msa0301680:CDS |
| GAATATCCCTAGAGAGAGGA+TGG | 0.495874 | 2_3:-58149859 | None:intergenic |
| CAAGCTGCACCTAAAGGAAA+AGG | 0.496432 | 2_3:+58153555 | Msa0301680:CDS |
| TCGGGGTCGATTTAGACTCC+AGG | 0.496794 | 2_3:+58153008 | Msa0301680:CDS |
| TTTGGAAGCATGTGTGTGGC+TGG | 0.497037 | 2_3:+58152538 | Msa0301680:CDS |
| TGGTTTCAACAAGCAGATGC+AGG | 0.504046 | 2_3:+58151710 | Msa0301680:CDS |
| TCCATGCAGACGATTGAAGA+TGG | 0.506940 | 2_3:+58149655 | Msa0301680:intron |
| AGAACCAGATGAAGCAGTAC+AGG | 0.507231 | 2_3:+58152723 | Msa0301680:CDS |
| TTGCTTGGATTGAACGGCTG+TGG | 0.511780 | 2_3:+58151317 | Msa0301680:CDS |
| ATTGCTCTGGTTGGACCCAA+TGG | 0.513877 | 2_3:+58153031 | Msa0301680:CDS |
| TCATTAGTTGTGACGAGGAA+AGG | 0.515894 | 2_3:+58151456 | Msa0301680:CDS |
| CGACGAACCATGCCATCTAA+AGG | 0.517489 | 2_3:-58153100 | None:intergenic |
| GTGAAATCACAACCAAAATA+CGG | 0.518081 | 2_3:-58152583 | None:intergenic |
| AGGTTCATCAAGTAGAAGAA+TGG | 0.518332 | 2_3:-58151808 | None:intergenic |
| GACACCATTAAGGAAATCTT+GGG | 0.522650 | 2_3:-58152609 | None:intergenic |
| TCTAATAGTTGATTCTGAGT+TGG | 0.522759 | 2_3:+58151160 | Msa0301680:CDS |
| CCCTCCTCTCTTTGCAGCGG+CGG | 0.522773 | 2_3:-58149720 | None:intergenic |
| ATCCCATTCATTCAATGCCT+CGG | 0.523753 | 2_3:-58153419 | None:intergenic |
| GAAATATTACCTACCTCTGA+AGG | 0.526085 | 2_3:-58150988 | None:intergenic |
| GAAGCAGTACAGGTGGGAGC+AGG | 0.526521 | 2_3:+58152733 | Msa0301680:CDS |
| TGGATTGTCGGGTAAAGCAC+AGG | 0.529724 | 2_3:+58153261 | Msa0301680:CDS |
| AGCCGAGGCATTGAATGAAT+GGG | 0.531518 | 2_3:+58153417 | Msa0301680:CDS |
| TTATTTATGTTCCAGGAGGA+TGG | 0.532051 | 2_3:+58151594 | Msa0301680:intron |
| TCATCAAGTAGAAGAATGGT+TGG | 0.533303 | 2_3:-58151804 | None:intergenic |
| GCGGGTTTATCTGACTGAAA+AGG | 0.536897 | 2_3:+58153577 | Msa0301680:exon |
| GAATTTGGAACGTGAGAAGA+AGG | 0.537560 | 2_3:-58149542 | None:intergenic |
| CAGCACACACCCATATCTCA+TGG | 0.540856 | 2_3:-58153492 | None:intergenic |
| GCCGCCGCTGCAAAGAGAGG+AGG | 0.541617 | 2_3:+58149719 | Msa0301680:CDS |
| ATCTACAAGAACATTGACTT+CGG | 0.541734 | 2_3:+58152989 | Msa0301680:CDS |
| AACAAATATTACAGAGGTGA+CGG | 0.543594 | 2_3:-58153776 | None:intergenic |
| AGCCTCTGACATGTCTGCGT+TGG | 0.547223 | 2_3:+58151427 | Msa0301680:CDS |
| CAACTATTAGATCATGTCCA+TGG | 0.547850 | 2_3:-58151148 | None:intergenic |
| AAAAGAGTACCCTGGAAATG+AGG | 0.547885 | 2_3:+58153207 | Msa0301680:CDS |
| TATGGTTTGCTTGGATTGAA+CGG | 0.549563 | 2_3:+58151311 | Msa0301680:CDS |
| ACCTGTTCTCCAGTTTGTGG+AGG | 0.551730 | 2_3:+58152937 | Msa0301680:CDS |
| CATCAAGTAGAAGAATGGTT+GGG | 0.553770 | 2_3:-58151803 | None:intergenic |
| GCTGCCGCCGCTGCAAAGAG+AGG | 0.556803 | 2_3:+58149716 | Msa0301680:CDS |
| ATATCTGATCGGACATGCAC+GGG | 0.557255 | 2_3:+58149824 | Msa0301680:CDS |
| GGAGCAGATTGCCTCAATGA+AGG | 0.557274 | 2_3:+58152754 | Msa0301680:CDS |
| TGGTTGGACCCAATGGAGCT+GGG | 0.558985 | 2_3:+58153038 | Msa0301680:CDS |
| TGCAATGTATTCCTTCATTG+AGG | 0.559633 | 2_3:-58152765 | None:intergenic |
| CCATTATCAATGTATCATGT+TGG | 0.560306 | 2_3:-58153844 | None:intergenic |
| GTGTTGCTAGCTGCTTGAGG+TGG | 0.560811 | 2_3:+58153668 | Msa0301680:three_prime_UTR |
| CCAACCTACATTGTAATACA+AGG | 0.560880 | 2_3:-58153646 | None:intergenic |
| CCGCCGCTGCAAAGAGAGGA+GGG | 0.562371 | 2_3:+58149720 | Msa0301680:CDS |
| AAAGGCGTCGGAGAAGGCGG+TGG | 0.562809 | 2_3:+58149769 | Msa0301680:CDS |
| AGTTGGAGCTAAATTATGGA+AGG | 0.564374 | 2_3:+58151177 | Msa0301680:CDS |
| ACCAGATGAAGCAGTACAGG+TGG | 0.568916 | 2_3:+58152726 | Msa0301680:CDS |
| ACGTTCCTGAAGCTTATGAC+AGG | 0.572055 | 2_3:+58153067 | Msa0301680:CDS |
| CGCTGCAAAGAGAGGAGGGA+AGG | 0.574075 | 2_3:+58149724 | Msa0301680:CDS |
| CTGATCAAACAGTGACCAGA+TGG | 0.574106 | 2_3:+58153512 | Msa0301680:CDS |
| CCTATGAGAAATTTATCGGA+TGG | 0.574573 | 2_3:+58153289 | Msa0301680:CDS |
| GGATATTTATCACCTTAGCC+GGG | 0.580006 | 2_3:+58151397 | Msa0301680:CDS |
| GATATCTGATCGGACATGCA+CGG | 0.582650 | 2_3:+58149823 | Msa0301680:CDS |
| CACAAACTGGAGAACAGGTG+GGG | 0.584349 | 2_3:-58152933 | None:intergenic |
| TCCACAAACTGGAGAACAGG+TGG | 0.586563 | 2_3:-58152935 | None:intergenic |
| ATGTTCCAGGAGGATGGTGG+TGG | 0.591374 | 2_3:+58151600 | Msa0301680:intron |
| TACATTGCACGATTTGGCCA+TGG | 0.600697 | 2_3:+58152779 | Msa0301680:CDS |
| TTTATGTTCCAGGAGGATGG+TGG | 0.602285 | 2_3:+58151597 | Msa0301680:intron |
| TCTGTTTATGAATCCTTCAG+AGG | 0.604197 | 2_3:+58150975 | Msa0301680:CDS |
| CCACAAACTGGAGAACAGGT+GGG | 0.611917 | 2_3:-58152934 | None:intergenic |
| GAATGAATGGGATGGTGGCA+TGG | 0.612616 | 2_3:+58153429 | Msa0301680:CDS |
| CTGCACCTAAAGGAAAAGGC+GGG | 0.612988 | 2_3:+58153559 | Msa0301680:CDS |
| GAAATTTATCGGATGGACAA+AGG | 0.614374 | 2_3:+58153296 | Msa0301680:CDS |
| CCTTGTATTACAATGTAGGT+TGG | 0.614457 | 2_3:+58153646 | Msa0301680:three_prime_UTR |
| TCATCTAATAGCAGCAAGTG+AGG | 0.614956 | 2_3:-58153355 | None:intergenic |
| GCGCGGTGGACTTACAGAGA+AGG | 0.616834 | 2_3:+58152859 | Msa0301680:CDS |
| TAGATTTGGAAGCATGTGTG+TGG | 0.617264 | 2_3:+58152534 | Msa0301680:intron |
| TAGTGTTGCTAACGGAATTG+GGG | 0.617899 | 2_3:+58149793 | Msa0301680:CDS |
| ATAAAGAGTAAAGGAGCCAG+AGG | 0.619651 | 2_3:-58153920 | None:intergenic |
| GAATCAGACATAGAAATCAC+CGG | 0.620043 | 2_3:+58153727 | Msa0301680:three_prime_UTR |
| TTGGTGTTGCTAGCTGCTTG+AGG | 0.622629 | 2_3:+58153665 | Msa0301680:three_prime_UTR |
| GCTTCCTATTCCAGACCACA+TGG | 0.623990 | 2_3:+58151376 | Msa0301680:CDS |
| GCTGCACCTAAAGGAAAAGG+CGG | 0.625202 | 2_3:+58153558 | Msa0301680:CDS |
| ACAAACTGGAGAACAGGTGG+GGG | 0.628419 | 2_3:-58152932 | None:intergenic |
| AGCACACACCCATATCTCAT+GGG | 0.630239 | 2_3:-58153491 | None:intergenic |
| CAAACAGTGACCAGATGGGA+AGG | 0.631024 | 2_3:+58153517 | Msa0301680:CDS |
| AATATCCCTAGAGAGAGGAT+GGG | 0.632152 | 2_3:-58149858 | None:intergenic |
| GACAATTGACTCGTTAGCCG+AGG | 0.636847 | 2_3:+58153402 | Msa0301680:CDS |
| CGGTGGACTTACAGAGAAGG+TGG | 0.640373 | 2_3:+58152862 | Msa0301680:CDS |
| GGGATATTCAGATATCTGAT+CGG | 0.640506 | 2_3:+58149813 | Msa0301680:CDS |
| GATGAACCTACAAATCACCT+TGG | 0.641091 | 2_3:+58151822 | Msa0301680:CDS |
| GGAGTCGCGTGATCTTTGCA+TGG | 0.644084 | 2_3:+58153317 | Msa0301680:CDS |
| GGTGAAATTGTGCAATGCGA+AGG | 0.646343 | 2_3:-58153132 | None:intergenic |
| GATCTTGTGCAGTGGTGATG+AGG | 0.647357 | 2_3:-58149515 | None:intergenic |
| TGATCAAACAGTGACCAGAT+GGG | 0.653848 | 2_3:+58153513 | Msa0301680:CDS |
| CTACAAGAACATTGACTTCG+GGG | 0.653950 | 2_3:+58152991 | Msa0301680:CDS |
| CTTCCCTCCTCTCTTTGCAG+CGG | 0.655854 | 2_3:-58149723 | None:intergenic |
| ACCTGAATATCCCTAGAGAG+AGG | 0.657445 | 2_3:-58149863 | None:intergenic |
| GGCTGTCATTAGTTGTGACG+AGG | 0.658773 | 2_3:+58151451 | Msa0301680:CDS |
| CCAGATGAAGCAGTACAGGT+GGG | 0.659061 | 2_3:+58152727 | Msa0301680:CDS |
| GCGGTGGATAGTGTTGCTAA+CGG | 0.662681 | 2_3:+58149785 | Msa0301680:CDS |
| AAGGCAGCGTCTGTGATGCG+CGG | 0.666375 | 2_3:+58153596 | Msa0301680:three_prime_UTR |
| AAGGTATAGATCTTGTGCAG+TGG | 0.669933 | 2_3:-58149523 | None:intergenic |
| CTCCAACGCAGACATGTCAG+AGG | 0.671580 | 2_3:-58151429 | None:intergenic |
| GCATTGAATGAATGGGATGG+TGG | 0.687430 | 2_3:+58153424 | Msa0301680:CDS |
| TTTATGATAAAAGAGTACCC+TGG | 0.697631 | 2_3:+58153199 | Msa0301680:CDS |
| GAGGCATTGAATGAATGGGA+TGG | 0.699572 | 2_3:+58153421 | Msa0301680:CDS |
| GGAAGCATGTGTGTGGCTGG+AGG | 0.706083 | 2_3:+58152541 | Msa0301680:CDS |
| AATGGTTGGGTTCATAAACA+GGG | 0.707136 | 2_3:-58151790 | None:intergenic |
| TAAGGTGATAAATATCCATG+TGG | 0.717137 | 2_3:-58151391 | None:intergenic |
| GGTCTGGAATAGGAAGCTCA+CGG | 0.726335 | 2_3:-58151370 | None:intergenic |
| GTTTCCCCACATCAACAAAG+CGG | 0.731629 | 2_3:-58152907 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTTAATTAATTGTTATT+CGG | + | chr2_3:58149933-58149952 | Msa0301680:intron | 10.0% |
| !! | ATAATAAATATTTGTAGATT+TGG | + | chr2_3:58152520-58152539 | Msa0301680:intron | 10.0% |
| !!! | GTTATTGATTAGTTTAATTT+TGG | + | chr2_3:58149903-58149922 | Msa0301680:intron | 15.0% |
| !!! | AAAAAAACTAACACAATTTT+TGG | - | chr2_3:58150174-58150193 | None:intergenic | 15.0% |
| !!! | GACTTTTATTAACAAAATTA+CGG | + | chr2_3:58150241-58150260 | Msa0301680:intron | 15.0% |
| !!! | ACTTTTATTAACAAAATTAC+GGG | + | chr2_3:58150242-58150261 | Msa0301680:intron | 15.0% |
| !!! | TCAAAATCAATTTTTGTATT+AGG | + | chr2_3:58150609-58150628 | Msa0301680:intron | 15.0% |
| !! | TAATAATTAATTGAGAATCT+GGG | - | chr2_3:58150794-58150813 | None:intergenic | 15.0% |
| !! | TTAATAATTAATTGAGAATC+TGG | - | chr2_3:58150795-58150814 | None:intergenic | 15.0% |
| !!! | AATTATTAATCCCATATTTT+CGG | + | chr2_3:58150806-58150825 | Msa0301680:intron | 15.0% |
| !! | TTCAATATTGAACAATAAAA+AGG | + | chr2_3:58151008-58151027 | Msa0301680:intron | 15.0% |
| !! | GACAATTAAATGTATTTATA+TGG | - | chr2_3:58151043-58151062 | None:intergenic | 15.0% |
| !! | TTTCTTACTATAATATTTGT+TGG | + | chr2_3:58151255-58151274 | Msa0301680:intron | 15.0% |
| !!! | TACATTAACATCTAATTTTA+TGG | + | chr2_3:58152273-58152292 | Msa0301680:intron | 15.0% |
| !! | ATTAAAAACAAATATTACAG+AGG | - | chr2_3:58153785-58153804 | None:intergenic | 15.0% |
| !! | TTTGTTCTTTATGTTATGTA+TGG | + | chr2_3:58149973-58149992 | Msa0301680:intron | 20.0% |
| !!! | GCTTTTTTTTTTTTTTGGAA+TGG | - | chr2_3:58150366-58150385 | None:intergenic | 20.0% |
| !!! | GAGAAGCTTTTTTTTTTTTT+TGG | - | chr2_3:58150371-58150390 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGCTTCTCTTTTA+AGG | + | chr2_3:58150376-58150395 | Msa0301680:intron | 20.0% |
| !!! | ACACTTCAAATTATTTTTCA+TGG | - | chr2_3:58150584-58150603 | None:intergenic | 20.0% |
| !! | AGAATTATGTTGAAATTTGA+AGG | - | chr2_3:58150674-58150693 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTGAAAATGATC+TGG | + | chr2_3:58150702-58150721 | Msa0301680:intron | 20.0% |
| !! | TAAGTCAGAAGATATAAATA+TGG | - | chr2_3:58151218-58151237 | None:intergenic | 20.0% |
| !! | GAACATAAATAAATAAAGTG+TGG | - | chr2_3:58151586-58151605 | None:intergenic | 20.0% |
| !!! | ACTTTATTTATTTATGTTCC+AGG | + | chr2_3:58151587-58151606 | Msa0301680:intron | 20.0% |
| !!! | ATTAACATCTAATTTTATGG+AGG | + | chr2_3:58152276-58152295 | Msa0301680:intron | 20.0% |
| !! | GTGAATATAATCAAATGAAA+TGG | + | chr2_3:58153703-58153722 | Msa0301680:three_prime_UTR | 20.0% |
| !! | ATTTATGATGCTTATCAATT+TGG | + | chr2_3:58153806-58153825 | Msa0301680:three_prime_UTR | 20.0% |
| ! | TTTCAACTTAATGATCATGT+AGG | - | chr2_3:58149626-58149645 | None:intergenic | 25.0% |
| ! | TCTATGACTTGAGTTTATAA+AGG | - | chr2_3:58150223-58150242 | None:intergenic | 25.0% |
| !! | ACTGTTTTCATAATCTATTC+TGG | + | chr2_3:58150404-58150423 | Msa0301680:intron | 25.0% |
| ! | CAGTCATAATAATCAGAATT+AGG | - | chr2_3:58150553-58150572 | None:intergenic | 25.0% |
| ! | TTTCAACATAATTCTTGTCT+TGG | + | chr2_3:58150679-58150698 | Msa0301680:intron | 25.0% |
| !!! | ATAAACAGAGATTTTGACAT+GGG | - | chr2_3:58150964-58150983 | None:intergenic | 25.0% |
| !! | GTTGTATTCTATTGACATTT+TGG | + | chr2_3:58151084-58151103 | Msa0301680:intron | 25.0% |
| ! | ATATCTTCTGACTTATGAAT+AGG | + | chr2_3:58151223-58151242 | Msa0301680:intron | 25.0% |
| !!! | TAACTTATTTTCAGACGTTA+TGG | + | chr2_3:58151293-58151312 | Msa0301680:intron | 25.0% |
| ! | TTATTTATTTATGTTCCAGG+AGG | + | chr2_3:58151590-58151609 | Msa0301680:intron | 25.0% |
| !! | AATGAAAGAGTTACTCTTTT+CGG | - | chr2_3:58151860-58151879 | None:intergenic | 25.0% |
| !!! | TTTTTTAATTGAAGGTCACA+TGG | + | chr2_3:58151962-58151981 | Msa0301680:intron | 25.0% |
| !!! | TTTTTAATTGAAGGTCACAT+GGG | + | chr2_3:58151963-58151982 | Msa0301680:intron | 25.0% |
| ! | GTATGCTTTGATAAAACATT+TGG | + | chr2_3:58152108-58152127 | Msa0301680:intron | 25.0% |
| !! | AAAGCATCATCATAACTAAA+AGG | - | chr2_3:58152359-58152378 | None:intergenic | 25.0% |
| ! | TCAGACTAAATTCAATGTAT+TGG | + | chr2_3:58152378-58152397 | Msa0301680:intron | 25.0% |
| ! | AAAACATTGCAAGATATGAA+GGG | - | chr2_3:58152416-58152435 | None:intergenic | 25.0% |
| ! | AAAAACATTGCAAGATATGA+AGG | - | chr2_3:58152417-58152436 | None:intergenic | 25.0% |
| ! | TCGATATCTAAATGATTAGT+TGG | - | chr2_3:58153382-58153401 | None:intergenic | 25.0% |
| ! | AGCTCAAAAAATAATTAAGC+CGG | - | chr2_3:58153749-58153768 | None:intergenic | 25.0% |
| !! | TGGATGATTAGTTCTTTTGT+AGG | + | chr2_3:58149993-58150012 | Msa0301680:intron | 30.0% |
| !! | GGATGATTAGTTCTTTTGTA+GGG | + | chr2_3:58149994-58150013 | Msa0301680:intron | 30.0% |
| ! | AACAATGAACAGAGTTGATT+TGG | + | chr2_3:58150064-58150083 | Msa0301680:intron | 30.0% |
| !!! | AATTTTTGGTGCTGAAAAAC+GGG | - | chr2_3:58150160-58150179 | None:intergenic | 30.0% |
| !!! | CAATTTTTGGTGCTGAAAAA+CGG | - | chr2_3:58150161-58150180 | None:intergenic | 30.0% |
| TAAGTGCTTATGCTATAATC+TGG | - | chr2_3:58150291-58150310 | None:intergenic | 30.0% | |
| TTTCATAAGTTCTTACCGAA+CGG | + | chr2_3:58150454-58150473 | Msa0301680:intron | 30.0% | |
| GTTTGAAAAATTACCACCAA+GGG | - | chr2_3:58150531-58150550 | None:intergenic | 30.0% | |
| CATATATTGCATTGTATCTC+TGG | + | chr2_3:58150742-58150761 | Msa0301680:intron | 30.0% | |
| TAAATTATTGTAGCTAGCGT+GGG | + | chr2_3:58150872-58150891 | Msa0301680:intron | 30.0% | |
| !! | CATAAACAGAGATTTTGACA+TGG | - | chr2_3:58150965-58150984 | None:intergenic | 30.0% |
| ! | TCTTTATCAGTTACTTTCCA+TGG | + | chr2_3:58151131-58151150 | Msa0301680:CDS | 30.0% |
| ! | TCTAATAGTTGATTCTGAGT+TGG | + | chr2_3:58151160-58151179 | Msa0301680:CDS | 30.0% |
| TAAGGTGATAAATATCCATG+TGG | - | chr2_3:58151394-58151413 | None:intergenic | 30.0% | |
| !! | GCTGAAATTTTATTTGGTCT+TGG | + | chr2_3:58151690-58151709 | Msa0301680:CDS | 30.0% |
| ! | ATGAAAGAGTTACTCTTTTC+GGG | - | chr2_3:58151859-58151878 | None:intergenic | 30.0% |
| TCAATGCATAAAACATGACA+AGG | - | chr2_3:58151905-58151924 | None:intergenic | 30.0% | |
| !!! | GACTCGTGTTTTTTAATTGA+AGG | + | chr2_3:58151954-58151973 | Msa0301680:intron | 30.0% |
| ATCCATGTCTTATACTTGAT+AGG | - | chr2_3:58152014-58152033 | None:intergenic | 30.0% | |
| !! | TGCTTTGAGTAAAGTTTTCT+TGG | + | chr2_3:58152084-58152103 | Msa0301680:intron | 30.0% |
| TTTGATGCTTTGTATCATCA+TGG | + | chr2_3:58152162-58152181 | Msa0301680:intron | 30.0% | |
| TTGATGCTTTGTATCATCAT+GGG | + | chr2_3:58152163-58152182 | Msa0301680:intron | 30.0% | |
| AAATAGAAGATGCAAGTGAA+TGG | - | chr2_3:58152219-58152238 | None:intergenic | 30.0% | |
| ! | ATATAGTCTTGGGTAGTTAT+CGG | + | chr2_3:58152328-58152347 | Msa0301680:intron | 30.0% |
| TGTCCTTATAGTCTAATCTT+TGG | + | chr2_3:58152459-58152478 | Msa0301680:intron | 30.0% | |
| ! | GAAGAAATTTGACCGTATTT+TGG | + | chr2_3:58152571-58152590 | Msa0301680:CDS | 30.0% |
| GTGAAATCACAACCAAAATA+CGG | - | chr2_3:58152586-58152605 | None:intergenic | 30.0% | |
| AAAAAGCTGAAGTTCTATAC+TGG | + | chr2_3:58152659-58152678 | Msa0301680:CDS | 30.0% | |
| TTCTTGTAGATGAGATTATC+AGG | - | chr2_3:58152980-58152999 | None:intergenic | 30.0% | |
| !! | ATCTACAAGAACATTGACTT+CGG | + | chr2_3:58152989-58153008 | Msa0301680:CDS | 30.0% |
| ! | GGTACTCTTTTATCATAAAC+TGG | - | chr2_3:58153198-58153217 | None:intergenic | 30.0% |
| !! | TTTATGATAAAAGAGTACCC+TGG | + | chr2_3:58153199-58153218 | Msa0301680:CDS | 30.0% |
| GATGCCTATGAGAAATTTAT+CGG | + | chr2_3:58153285-58153304 | Msa0301680:CDS | 30.0% | |
| !! | TTCTGGTTAGTCATGATTTT+AGG | + | chr2_3:58153452-58153471 | Msa0301680:CDS | 30.0% |
| ! | TGATTTTAGGCTCATAAATC+AGG | + | chr2_3:58153465-58153484 | Msa0301680:CDS | 30.0% |
| ATGACCTTGTATTACAATGT+AGG | + | chr2_3:58153642-58153661 | Msa0301680:three_prime_UTR | 30.0% | |
| AACAAATATTACAGAGGTGA+CGG | - | chr2_3:58153779-58153798 | None:intergenic | 30.0% | |
| CCATTATCAATGTATCATGT+TGG | - | chr2_3:58153847-58153866 | None:intergenic | 30.0% | |
| CCAACATGATACATTGATAA+TGG | + | chr2_3:58153844-58153863 | Msa0301680:three_prime_UTR | 30.0% | |
| !! | AGGTTTGGTTTGGTATATAG+AGG | - | chr2_3:58149446-58149465 | None:intergenic | 35.0% |
| !! | TTTCTTCGTTTTTGTTGAGG+TGG | - | chr2_3:58149471-58149490 | None:intergenic | 35.0% |
| !! | CGATTTCTTCGTTTTTGTTG+AGG | - | chr2_3:58149474-58149493 | None:intergenic | 35.0% |
| ! | ATAGTGTTGCTAACGGAATT+GGG | + | chr2_3:58149792-58149811 | Msa0301680:CDS | 35.0% |
| GGGATATTCAGATATCTGAT+CGG | + | chr2_3:58149813-58149832 | Msa0301680:CDS | 35.0% | |
| ! | TCCGAAGAGTGAAATCATTT+TGG | + | chr2_3:58150111-58150130 | Msa0301680:intron | 35.0% |
| GCCAAAATGATTTCACTCTT+CGG | - | chr2_3:58150115-58150134 | None:intergenic | 35.0% | |
| GCGTTACATTTATCCAATCA+GGG | - | chr2_3:58150137-58150156 | None:intergenic | 35.0% | |
| !!! | ATTTTTGGTGCTGAAAAACG+GGG | - | chr2_3:58150159-58150178 | None:intergenic | 35.0% |
| TTCATAAGTTCTTACCGAAC+GGG | + | chr2_3:58150455-58150474 | Msa0301680:intron | 35.0% | |
| TAAGCACTTATAAACCCGTT+CGG | - | chr2_3:58150472-58150491 | None:intergenic | 35.0% | |
| GGTTTGAAAAATTACCACCA+AGG | - | chr2_3:58150532-58150551 | None:intergenic | 35.0% | |
| GTTGAAATTTGAAGGACACA+AGG | - | chr2_3:58150666-58150685 | None:intergenic | 35.0% | |
| TCTGGAAAAAAAGAGAGAAC+TGG | + | chr2_3:58150760-58150779 | Msa0301680:intron | 35.0% | |
| CTAAATTATTGTAGCTAGCG+TGG | + | chr2_3:58150871-58150890 | Msa0301680:intron | 35.0% | |
| TCTGTTTATGAATCCTTCAG+AGG | + | chr2_3:58150975-58150994 | Msa0301680:CDS | 35.0% | |
| TTTATGAATCCTTCAGAGGT+AGG | + | chr2_3:58150979-58150998 | Msa0301680:intron | 35.0% | |
| GAAATATTACCTACCTCTGA+AGG | - | chr2_3:58150991-58151010 | None:intergenic | 35.0% | |
| CAACTATTAGATCATGTCCA+TGG | - | chr2_3:58151151-58151170 | None:intergenic | 35.0% | |
| ! | TCTGAGTTGGAGCTAAATTA+TGG | + | chr2_3:58151173-58151192 | Msa0301680:CDS | 35.0% |
| AGTTGGAGCTAAATTATGGA+AGG | + | chr2_3:58151177-58151196 | Msa0301680:CDS | 35.0% | |
| !! | TATGGTTTGCTTGGATTGAA+CGG | + | chr2_3:58151311-58151330 | Msa0301680:CDS | 35.0% |
| TGATAAATATCCATGTGGTC+TGG | - | chr2_3:58151389-58151408 | None:intergenic | 35.0% | |
| TGGATATTTATCACCTTAGC+CGG | + | chr2_3:58151396-58151415 | Msa0301680:CDS | 35.0% | |
| GAGAAAGAAGCTGAAATTCT+GGG | + | chr2_3:58151488-58151507 | Msa0301680:CDS | 35.0% | |
| CCGTAAAAGCAAAACAACTT+GGG | - | chr2_3:58151557-58151576 | None:intergenic | 35.0% | |
| !! | CCCAAGTTGTTTTGCTTTTA+CGG | + | chr2_3:58151554-58151573 | Msa0301680:intron | 35.0% |
| TCCGTAAAAGCAAAACAACT+TGG | - | chr2_3:58151558-58151577 | None:intergenic | 35.0% | |
| TTATTTATGTTCCAGGAGGA+TGG | + | chr2_3:58151594-58151613 | Msa0301680:intron | 35.0% | |
| ! | CACTTGAACGAGTTTTTGAA+CGG | + | chr2_3:58151628-58151647 | Msa0301680:CDS | 35.0% |
| !! | CGTGCTGCTGAAATTTTATT+TGG | + | chr2_3:58151684-58151703 | Msa0301680:CDS | 35.0% |
| ! | AAGAAGACACGTGATTTTTC+TGG | + | chr2_3:58151735-58151754 | Msa0301680:CDS | 35.0% |
| AATGGTTGGGTTCATAAACA+GGG | - | chr2_3:58151793-58151812 | None:intergenic | 35.0% | |
| CATCAAGTAGAAGAATGGTT+GGG | - | chr2_3:58151806-58151825 | None:intergenic | 35.0% | |
| TCATCAAGTAGAAGAATGGT+TGG | - | chr2_3:58151807-58151826 | None:intergenic | 35.0% | |
| AGGTTCATCAAGTAGAAGAA+TGG | - | chr2_3:58151811-58151830 | None:intergenic | 35.0% | |
| ! | TGAAAGAGTTACTCTTTTCG+GGG | - | chr2_3:58151858-58151877 | None:intergenic | 35.0% |
| TGCCTATCAAGTATAAGACA+TGG | + | chr2_3:58152009-58152028 | Msa0301680:intron | 35.0% | |
| CGAACAAACTAGAACTAGAA+GGG | - | chr2_3:58152046-58152065 | None:intergenic | 35.0% | |
| ACGAACAAACTAGAACTAGA+AGG | - | chr2_3:58152047-58152066 | None:intergenic | 35.0% | |
| !! | TCTAGTTCTAGTTTGTTCGT+TGG | + | chr2_3:58152047-58152066 | Msa0301680:intron | 35.0% |
| !! | CTAGTTCTAGTTTGTTCGTT+GGG | + | chr2_3:58152048-58152067 | Msa0301680:intron | 35.0% |
| CTTTACTCAAAGCAACATAG+AGG | - | chr2_3:58152078-58152097 | None:intergenic | 35.0% | |
| GCTTTGATAAAACATTTGGC+AGG | + | chr2_3:58152112-58152131 | Msa0301680:intron | 35.0% | |
| TTCGTACTCTGATATAGTCT+TGG | + | chr2_3:58152317-58152336 | Msa0301680:intron | 35.0% | |
| TCGTACTCTGATATAGTCTT+GGG | + | chr2_3:58152318-58152337 | Msa0301680:intron | 35.0% | |
| CGACCAAAGATTAGACTATA+AGG | - | chr2_3:58152465-58152484 | None:intergenic | 35.0% | |
| TTTGGTCGTATATCATAGCT+GGG | + | chr2_3:58152477-58152496 | Msa0301680:intron | 35.0% | |
| GACACCATTAAGGAAATCTT+GGG | - | chr2_3:58152612-58152631 | None:intergenic | 35.0% | |
| AGACACCATTAAGGAAATCT+TGG | - | chr2_3:58152613-58152632 | None:intergenic | 35.0% | |
| TATTTGTGCAGACACCATTA+AGG | - | chr2_3:58152622-58152641 | None:intergenic | 35.0% | |
| !!! | TCAGCTTTTTGTTTTGCATG+TGG | - | chr2_3:58152649-58152668 | None:intergenic | 35.0% |
| TGCAATGTATTCCTTCATTG+AGG | - | chr2_3:58152768-58152787 | None:intergenic | 35.0% | |
| AAGGAATACATTGCACGATT+TGG | + | chr2_3:58152773-58152792 | Msa0301680:CDS | 35.0% | |
| AGAGAAGACTCTTGCAAAAA+TGG | + | chr2_3:58152835-58152854 | Msa0301680:CDS | 35.0% | |
| !! | TCTACAAGAACATTGACTTC+GGG | + | chr2_3:58152990-58153009 | Msa0301680:CDS | 35.0% |
| CTTGACTGAAAAACTAGACT+TGG | + | chr2_3:58153159-58153178 | Msa0301680:CDS | 35.0% | |
| TATTGGGAAGTTTGGATTGT+CGG | + | chr2_3:58153249-58153268 | Msa0301680:CDS | 35.0% | |
| CCATCCGATAAATTTCTCAT+AGG | - | chr2_3:58153292-58153311 | None:intergenic | 35.0% | |
| CCTATGAGAAATTTATCGGA+TGG | + | chr2_3:58153289-58153308 | Msa0301680:CDS | 35.0% | |
| GAAATTTATCGGATGGACAA+AGG | + | chr2_3:58153296-58153315 | Msa0301680:CDS | 35.0% | |
| ! | TTTTAGGCTCATAAATCAGG+TGG | + | chr2_3:58153468-58153487 | Msa0301680:CDS | 35.0% |
| ! | GGTCATAATCGTGACATTTT+GGG | - | chr2_3:58153628-58153647 | None:intergenic | 35.0% |
| ! | AGGTCATAATCGTGACATTT+TGG | - | chr2_3:58153629-58153648 | None:intergenic | 35.0% |
| CCAACCTACATTGTAATACA+AGG | - | chr2_3:58153649-58153668 | None:intergenic | 35.0% | |
| CCTTGTATTACAATGTAGGT+TGG | + | chr2_3:58153646-58153665 | Msa0301680:three_prime_UTR | 35.0% | |
| GAATCAGACATAGAAATCAC+CGG | + | chr2_3:58153727-58153746 | Msa0301680:three_prime_UTR | 35.0% | |
| TGCTTATCAATTTGGTTGCT+TGG | + | chr2_3:58153814-58153833 | Msa0301680:three_prime_UTR | 35.0% | |
| ATTGTAGTACTTGTTTCCTC+TGG | + | chr2_3:58153904-58153923 | Msa0301680:three_prime_UTR | 35.0% | |
| AAGGTATAGATCTTGTGCAG+TGG | - | chr2_3:58149526-58149545 | None:intergenic | 40.0% | |
| ! | GAATTTGGAACGTGAGAAGA+AGG | - | chr2_3:58149545-58149564 | None:intergenic | 40.0% |
| GAAAAAAGCTGCTCAGAAGA+AGG | + | chr2_3:58149694-58149713 | Msa0301680:CDS | 40.0% | |
| ! | GATAGTGTTGCTAACGGAAT+TGG | + | chr2_3:58149791-58149810 | Msa0301680:CDS | 40.0% |
| ! | TAGTGTTGCTAACGGAATTG+GGG | + | chr2_3:58149793-58149812 | Msa0301680:CDS | 40.0% |
| AATATCCCTAGAGAGAGGAT+GGG | - | chr2_3:58149861-58149880 | None:intergenic | 40.0% | |
| !! | GAAATCATTTTGGCCCTGAT+TGG | + | chr2_3:58150121-58150140 | Msa0301680:intron | 40.0% |
| GGCGTTACATTTATCCAATC+AGG | - | chr2_3:58150138-58150157 | None:intergenic | 40.0% | |
| ! | AATCCCATATTTTCGGACAC+TGG | + | chr2_3:58150813-58150832 | Msa0301680:intron | 40.0% |
| ATGCCAGTGTCCGAAAATAT+GGG | - | chr2_3:58150819-58150838 | None:intergenic | 40.0% | |
| TATGCCAGTGTCCGAAAATA+TGG | - | chr2_3:58150820-58150839 | None:intergenic | 40.0% | |
| !! | AGATTTTGACATGGGCTACA+TGG | - | chr2_3:58150956-58150975 | None:intergenic | 40.0% |
| !! | TTCAGACGTTATGGTTTGCT+TGG | + | chr2_3:58151302-58151321 | Msa0301680:intron | 40.0% |
| TCTACGCTACTTACAGCAAT+AGG | + | chr2_3:58151344-58151363 | Msa0301680:CDS | 40.0% | |
| ! | ATATCCATGTGGTCTGGAAT+AGG | - | chr2_3:58151383-58151402 | None:intergenic | 40.0% |
| GGATATTTATCACCTTAGCC+GGG | + | chr2_3:58151397-58151416 | Msa0301680:CDS | 40.0% | |
| TCATTAGTTGTGACGAGGAA+AGG | + | chr2_3:58151456-58151475 | Msa0301680:CDS | 40.0% | |
| TGACGAGGAAAGGTTGAAAT+TGG | + | chr2_3:58151466-58151485 | Msa0301680:CDS | 40.0% | |
| GGAGAAAGAAGCTGAAATTC+TGG | + | chr2_3:58151487-58151506 | Msa0301680:CDS | 40.0% | |
| ! | AATTTCAGCAGCACGCTTTT+CGG | - | chr2_3:58151679-58151698 | None:intergenic | 40.0% |
| ! | AAGACACGTGATTTTTCTGG+TGG | + | chr2_3:58151738-58151757 | Msa0301680:CDS | 40.0% |
| GAATGGTTGGGTTCATAAAC+AGG | - | chr2_3:58151794-58151813 | None:intergenic | 40.0% | |
| GATGAACCTACAAATCACCT+TGG | + | chr2_3:58151822-58151841 | Msa0301680:CDS | 40.0% | |
| CTTTGGTCGTATATCATAGC+TGG | + | chr2_3:58152476-58152495 | Msa0301680:intron | 40.0% | |
| ! | TAGATTTGGAAGCATGTGTG+TGG | + | chr2_3:58152534-58152553 | Msa0301680:intron | 40.0% |
| CACTCCCAAGATTTCCTTAA+TGG | + | chr2_3:58152605-58152624 | Msa0301680:CDS | 40.0% | |
| TCTTCTCTTTACTCTGAGCT+TGG | - | chr2_3:58152823-58152842 | None:intergenic | 40.0% | |
| !! | AGTTTTCCGCTTTGTTGATG+TGG | + | chr2_3:58152901-58152920 | Msa0301680:CDS | 40.0% |
| !! | GTTTTCCGCTTTGTTGATGT+GGG | + | chr2_3:58152902-58152921 | Msa0301680:CDS | 40.0% |
| !! | TTTTCCGCTTTGTTGATGTG+GGG | + | chr2_3:58152903-58152922 | Msa0301680:CDS | 40.0% |
| !! | CTACAAGAACATTGACTTCG+GGG | + | chr2_3:58152991-58153010 | Msa0301680:CDS | 40.0% |
| AATCACCTGTCATAAGCTTC+AGG | - | chr2_3:58153075-58153094 | None:intergenic | 40.0% | |
| GAAGCTTATGACAGGTGATT+TGG | + | chr2_3:58153075-58153094 | Msa0301680:CDS | 40.0% | |
| !! | GGTGATTTGGTTCCTTTAGA+TGG | + | chr2_3:58153088-58153107 | Msa0301680:CDS | 40.0% |
| ! | TTTGGTTCCTTTAGATGGCA+TGG | + | chr2_3:58153093-58153112 | Msa0301680:CDS | 40.0% |
| !! | CTAGTTTTTCAGTCAAGTGC+TGG | - | chr2_3:58153156-58153175 | None:intergenic | 40.0% |
| !! | AAAAGAGTACCCTGGAAATG+AGG | + | chr2_3:58153207-58153226 | Msa0301680:CDS | 40.0% |
| TCCTTTCTTCCTCATTTCCA+GGG | - | chr2_3:58153219-58153238 | None:intergenic | 40.0% | |
| ATCCTTTCTTCCTCATTTCC+AGG | - | chr2_3:58153220-58153239 | None:intergenic | 40.0% | |
| AAAGGATGAGAGCAGCTATT+GGG | + | chr2_3:58153233-58153252 | Msa0301680:CDS | 40.0% | |
| ATTGGGAAGTTTGGATTGTC+GGG | + | chr2_3:58153250-58153269 | Msa0301680:CDS | 40.0% | |
| TCATCTAATAGCAGCAAGTG+AGG | - | chr2_3:58153358-58153377 | None:intergenic | 40.0% | |
| ATCCCATTCATTCAATGCCT+CGG | - | chr2_3:58153422-58153441 | None:intergenic | 40.0% | |
| TGATCAAACAGTGACCAGAT+GGG | + | chr2_3:58153513-58153532 | Msa0301680:CDS | 40.0% | |
| CATAATATCACCTTCCCATC+TGG | - | chr2_3:58153530-58153549 | None:intergenic | 40.0% | |
| CAGATGGGAAGGTGATATTA+TGG | + | chr2_3:58153528-58153547 | Msa0301680:CDS | 40.0% | |
| ! | ATAAACCCGCCTTTTCCTTT+AGG | - | chr2_3:58153567-58153586 | None:intergenic | 40.0% |
| TTTGTTGAGGTGGTGAGGTT+TGG | - | chr2_3:58149461-58149480 | None:intergenic | 45.0% | |
| !! | TCGTTTTTGTTGAGGTGGTG+AGG | - | chr2_3:58149466-58149485 | None:intergenic | 45.0% |
| CTTCTCACGTTCCAAATTCC+AGG | + | chr2_3:58149546-58149565 | Msa0301680:five_prime_UTR | 45.0% | |
| GAACATGCGAACCTGGAATT+TGG | - | chr2_3:58149560-58149579 | None:intergenic | 45.0% | |
| AGCTATAGAACATGCGAACC+TGG | - | chr2_3:58149567-58149586 | None:intergenic | 45.0% | |
| TCCATGCAGACGATTGAAGA+TGG | + | chr2_3:58149655-58149674 | Msa0301680:intron | 45.0% | |
| ACCATCTTCAATCGTCTGCA+TGG | - | chr2_3:58149659-58149678 | None:intergenic | 45.0% | |
| !!! | CTGAGCAGCTTTTTTCTTGC+TGG | - | chr2_3:58149690-58149709 | None:intergenic | 45.0% |
| GATATCTGATCGGACATGCA+CGG | + | chr2_3:58149823-58149842 | Msa0301680:CDS | 45.0% | |
| ATATCTGATCGGACATGCAC+GGG | + | chr2_3:58149824-58149843 | Msa0301680:CDS | 45.0% | |
| TTTGTTCCCATCCTCTCTCT+AGG | + | chr2_3:58149852-58149871 | Msa0301680:CDS | 45.0% | |
| TTGTTCCCATCCTCTCTCTA+GGG | + | chr2_3:58149853-58149872 | Msa0301680:CDS | 45.0% | |
| GAATATCCCTAGAGAGAGGA+TGG | - | chr2_3:58149862-58149881 | None:intergenic | 45.0% | |
| ! | TCCTCTCTCTAGGGATATTC+AGG | + | chr2_3:58149862-58149881 | Msa0301680:CDS | 45.0% |
| ACCTGAATATCCCTAGAGAG+AGG | - | chr2_3:58149866-58149885 | None:intergenic | 45.0% | |
| AAGTGAATCCATCAGACCCT+TGG | + | chr2_3:58150512-58150531 | Msa0301680:intron | 45.0% | |
| AATTACCACCAAGGGTCTGA+TGG | - | chr2_3:58150523-58150542 | None:intergenic | 45.0% | |
| TGAACACCTAGTCAAGCAGT+TGG | + | chr2_3:58150909-58150928 | Msa0301680:intron | 45.0% | |
| GAACACCTAGTCAAGCAGTT+GGG | + | chr2_3:58150910-58150929 | Msa0301680:intron | 45.0% | |
| TGTCAGAGGCTTCAATTTCC+CGG | - | chr2_3:58151418-58151437 | None:intergenic | 45.0% | |
| TTTATGTTCCAGGAGGATGG+TGG | + | chr2_3:58151597-58151616 | Msa0301680:intron | 45.0% | |
| ! | TGAACGAGTTTTTGAACGGC+TGG | + | chr2_3:58151632-58151651 | Msa0301680:CDS | 45.0% |
| ! | TTTTGAACGGCTGGAAGCTA+TGG | + | chr2_3:58151641-58151660 | Msa0301680:CDS | 45.0% |
| TGGTTTCAACAAGCAGATGC+AGG | + | chr2_3:58151710-58151729 | Msa0301680:CDS | 45.0% | |
| !! | CACGTGATTTTTCTGGTGGA+TGG | + | chr2_3:58151742-58151761 | Msa0301680:CDS | 45.0% |
| ! | TTTCTGGTGGATGGAGAATG+AGG | + | chr2_3:58151751-58151770 | Msa0301680:CDS | 45.0% |
| ! | GGGATACCAAGGTGATTTGT+AGG | - | chr2_3:58151831-58151850 | None:intergenic | 45.0% |
| !! | GTTACTCTTTTCGGGGAAGA+GGG | - | chr2_3:58151851-58151870 | None:intergenic | 45.0% |
| !! | AGTTACTCTTTTCGGGGAAG+AGG | - | chr2_3:58151852-58151871 | None:intergenic | 45.0% |
| !! | TTCTAGTTTGTTCGTTGGGC+AGG | + | chr2_3:58152052-58152071 | Msa0301680:intron | 45.0% |
| AGAACCAGATGAAGCAGTAC+AGG | + | chr2_3:58152723-58152742 | Msa0301680:CDS | 45.0% | |
| ! | TACATTGCACGATTTGGCCA+TGG | + | chr2_3:58152779-58152798 | Msa0301680:CDS | 45.0% |
| !!! | GAGCTAGTTTTGCTGATCCA+TGG | - | chr2_3:58152799-58152818 | None:intergenic | 45.0% |
| ACTCTTGCAAAAATGGAGCG+CGG | + | chr2_3:58152842-58152861 | Msa0301680:CDS | 45.0% | |
| GTTTCCCCACATCAACAAAG+CGG | - | chr2_3:58152910-58152929 | None:intergenic | 45.0% | |
| CAAATGTCACCTCCACAAAC+TGG | - | chr2_3:58152949-58152968 | None:intergenic | 45.0% | |
| CAGTTTGTGGAGGTGACATT+TGG | + | chr2_3:58152947-58152966 | Msa0301680:CDS | 45.0% | |
| TTTAGACTCCAGGATTGCTC+TGG | + | chr2_3:58153018-58153037 | Msa0301680:CDS | 45.0% | |
| ACGTTCCTGAAGCTTATGAC+AGG | + | chr2_3:58153067-58153086 | Msa0301680:CDS | 45.0% | |
| GTGCAATGCGAAGGTGATTA+TGG | - | chr2_3:58153126-58153145 | None:intergenic | 45.0% | |
| GGTGAAATTGTGCAATGCGA+AGG | - | chr2_3:58153135-58153154 | None:intergenic | 45.0% | |
| ACCCTGGAAATGAGGAAGAA+AGG | + | chr2_3:58153215-58153234 | Msa0301680:CDS | 45.0% | |
| GAAAGGATGAGAGCAGCTAT+TGG | + | chr2_3:58153232-58153251 | Msa0301680:CDS | 45.0% | |
| AGAGCAGCTATTGGGAAGTT+TGG | + | chr2_3:58153241-58153260 | Msa0301680:CDS | 45.0% | |
| !! | TAGCCGAGGCATTGAATGAA+TGG | + | chr2_3:58153416-58153435 | Msa0301680:CDS | 45.0% |
| !! | AGCCGAGGCATTGAATGAAT+GGG | + | chr2_3:58153417-58153436 | Msa0301680:CDS | 45.0% |
| !! | GAGGCATTGAATGAATGGGA+TGG | + | chr2_3:58153421-58153440 | Msa0301680:CDS | 45.0% |
| GCATTGAATGAATGGGATGG+TGG | + | chr2_3:58153424-58153443 | Msa0301680:CDS | 45.0% | |
| AGCACACACCCATATCTCAT+GGG | - | chr2_3:58153494-58153513 | None:intergenic | 45.0% | |
| CTGATCAAACAGTGACCAGA+TGG | + | chr2_3:58153512-58153531 | Msa0301680:CDS | 45.0% | |
| GGATTTCAAGCTGCACCTAA+AGG | + | chr2_3:58153549-58153568 | Msa0301680:CDS | 45.0% | |
| CAAGCTGCACCTAAAGGAAA+AGG | + | chr2_3:58153555-58153574 | Msa0301680:CDS | 45.0% | |
| GCGGGTTTATCTGACTGAAA+AGG | + | chr2_3:58153577-58153596 | Msa0301680:exon | 45.0% | |
| ! | CTTGAGGTGGATTTCTCTCA+TGG | + | chr2_3:58153681-58153700 | Msa0301680:three_prime_UTR | 45.0% |
| ! | TGAGGTGGTGAGGTTTGGTT+TGG | - | chr2_3:58149456-58149475 | None:intergenic | 50.0% |
| ! | TGCAGTGGTGATGAGGAGTT+AGG | - | chr2_3:58149511-58149530 | None:intergenic | 50.0% |
| ! | GATCTTGTGCAGTGGTGATG+AGG | - | chr2_3:58149518-58149537 | None:intergenic | 50.0% |
| !!! | CTTTTTCGATGAAGCGGTGG+CGG | - | chr2_3:58149753-58149772 | None:intergenic | 50.0% |
| !!! | CGACGCCTTTTTCGATGAAG+CGG | - | chr2_3:58149759-58149778 | None:intergenic | 50.0% |
| ! | CGCTTCATCGAAAAAGGCGT+CGG | + | chr2_3:58149757-58149776 | Msa0301680:CDS | 50.0% |
| !! | ATCGAAAAAGGCGTCGGAGA+AGG | + | chr2_3:58149763-58149782 | Msa0301680:CDS | 50.0% |
| ! | GCGGTGGATAGTGTTGCTAA+CGG | + | chr2_3:58149785-58149804 | Msa0301680:CDS | 50.0% |
| TGAATCCATCAGACCCTTGG+TGG | + | chr2_3:58150515-58150534 | Msa0301680:intron | 50.0% | |
| TTGCTTGGATTGAACGGCTG+TGG | + | chr2_3:58151317-58151336 | Msa0301680:CDS | 50.0% | |
| ! | GGTCTGGAATAGGAAGCTCA+CGG | - | chr2_3:58151373-58151392 | None:intergenic | 50.0% |
| GCTTCCTATTCCAGACCACA+TGG | + | chr2_3:58151376-58151395 | Msa0301680:CDS | 50.0% | |
| AGGCTTCAATTTCCCGGCTA+AGG | - | chr2_3:58151412-58151431 | None:intergenic | 50.0% | |
| GGCTGTCATTAGTTGTGACG+AGG | + | chr2_3:58151451-58151470 | Msa0301680:CDS | 50.0% | |
| ! | AGCTGAAATTCTGGGAGCAC+AGG | + | chr2_3:58151496-58151515 | Msa0301680:CDS | 50.0% |
| GGCTGTGCTGTATTGTGCTT+TGG | + | chr2_3:58152184-58152203 | Msa0301680:intron | 50.0% | |
| ! | TTTGGAAGCATGTGTGTGGC+TGG | + | chr2_3:58152538-58152557 | Msa0301680:CDS | 50.0% |
| TGTTCAGACACGTGCTGAAC+TGG | + | chr2_3:58152697-58152716 | Msa0301680:CDS | 50.0% | |
| ACCAGATGAAGCAGTACAGG+TGG | + | chr2_3:58152726-58152745 | Msa0301680:CDS | 50.0% | |
| CCAGATGAAGCAGTACAGGT+GGG | + | chr2_3:58152727-58152746 | Msa0301680:CDS | 50.0% | |
| GGAGCAGATTGCCTCAATGA+AGG | + | chr2_3:58152754-58152773 | Msa0301680:CDS | 50.0% | |
| ACAAACTGGAGAACAGGTGG+GGG | - | chr2_3:58152935-58152954 | None:intergenic | 50.0% | |
| CACAAACTGGAGAACAGGTG+GGG | - | chr2_3:58152936-58152955 | None:intergenic | 50.0% | |
| CCACAAACTGGAGAACAGGT+GGG | - | chr2_3:58152937-58152956 | None:intergenic | 50.0% | |
| TCCACAAACTGGAGAACAGG+TGG | - | chr2_3:58152938-58152957 | None:intergenic | 50.0% | |
| ACCTGTTCTCCAGTTTGTGG+AGG | + | chr2_3:58152937-58152956 | Msa0301680:CDS | 50.0% | |
| ACCTCCACAAACTGGAGAAC+AGG | - | chr2_3:58152941-58152960 | None:intergenic | 50.0% | |
| ATTGCTCTGGTTGGACCCAA+TGG | + | chr2_3:58153031-58153050 | Msa0301680:CDS | 50.0% | |
| CGACGAACCATGCCATCTAA+AGG | - | chr2_3:58153103-58153122 | None:intergenic | 50.0% | |
| TGGATTGTCGGGTAAAGCAC+AGG | + | chr2_3:58153261-58153280 | Msa0301680:CDS | 50.0% | |
| CAGCAAGTGAGGCTGTCTAT+AGG | - | chr2_3:58153347-58153366 | None:intergenic | 50.0% | |
| !! | GACAATTGACTCGTTAGCCG+AGG | + | chr2_3:58153402-58153421 | Msa0301680:CDS | 50.0% |
| ! | GAATGAATGGGATGGTGGCA+TGG | + | chr2_3:58153429-58153448 | Msa0301680:CDS | 50.0% |
| ATCAGGTGGCCCATGAGATA+TGG | + | chr2_3:58153482-58153501 | Msa0301680:CDS | 50.0% | |
| TCAGGTGGCCCATGAGATAT+GGG | + | chr2_3:58153483-58153502 | Msa0301680:CDS | 50.0% | |
| CAGCACACACCCATATCTCA+TGG | - | chr2_3:58153495-58153514 | None:intergenic | 50.0% | |
| CAAACAGTGACCAGATGGGA+AGG | + | chr2_3:58153517-58153536 | Msa0301680:CDS | 50.0% | |
| GCTGCACCTAAAGGAAAAGG+CGG | + | chr2_3:58153558-58153577 | Msa0301680:CDS | 50.0% | |
| CTGCACCTAAAGGAAAAGGC+GGG | + | chr2_3:58153559-58153578 | Msa0301680:CDS | 50.0% | |
| !! | TTGGTGTTGCTAGCTGCTTG+AGG | + | chr2_3:58153665-58153684 | Msa0301680:three_prime_UTR | 50.0% |
| CTTCCCTCCTCTCTTTGCAG+CGG | - | chr2_3:58149726-58149745 | None:intergenic | 55.0% | |
| CGCCACCGCTTCATCGAAAA+AGG | + | chr2_3:58149751-58149770 | Msa0301680:CDS | 55.0% | |
| !!! | CGCCTTTTTCGATGAAGCGG+TGG | - | chr2_3:58149756-58149775 | None:intergenic | 55.0% |
| !! | GAAAAAGGCGTCGGAGAAGG+CGG | + | chr2_3:58149766-58149785 | Msa0301680:CDS | 55.0% |
| ACCTAGTCAAGCAGTTGGGC+TGG | + | chr2_3:58150914-58150933 | Msa0301680:intron | 55.0% | |
| ACCAGCCCAACTGCTTGACT+AGG | - | chr2_3:58150918-58150937 | None:intergenic | 55.0% | |
| !! | AGCAGTTGGGCTGGTAGCAA+TGG | + | chr2_3:58150923-58150942 | Msa0301680:intron | 55.0% |
| AGCCTCTGACATGTCTGCGT+TGG | + | chr2_3:58151427-58151446 | Msa0301680:CDS | 55.0% | |
| CTCCAACGCAGACATGTCAG+AGG | - | chr2_3:58151432-58151451 | None:intergenic | 55.0% | |
| CTCTGACATGTCTGCGTTGG+AGG | + | chr2_3:58151430-58151449 | Msa0301680:CDS | 55.0% | |
| ! | ATGTTCCAGGAGGATGGTGG+TGG | + | chr2_3:58151600-58151619 | Msa0301680:intron | 55.0% |
| TTCGGGGAAGAGGGATACCA+AGG | - | chr2_3:58151842-58151861 | None:intergenic | 55.0% | |
| CCCACCTGTACTGCTTCATC+TGG | - | chr2_3:58152730-58152749 | None:intergenic | 55.0% | |
| CTTGCAAAAATGGAGCGCGG+TGG | + | chr2_3:58152845-58152864 | Msa0301680:CDS | 55.0% | |
| ! | CGGTGGACTTACAGAGAAGG+TGG | + | chr2_3:58152862-58152881 | Msa0301680:CDS | 55.0% |
| CCCACCTGTTCTCCAGTTTG+TGG | + | chr2_3:58152934-58152953 | Msa0301680:CDS | 55.0% | |
| ! | TCGGGGTCGATTTAGACTCC+AGG | + | chr2_3:58153008-58153027 | Msa0301680:CDS | 55.0% |
| GACTCCAGGATTGCTCTGGT+TGG | + | chr2_3:58153022-58153041 | Msa0301680:CDS | 55.0% | |
| TGGTTGGACCCAATGGAGCT+GGG | + | chr2_3:58153038-58153057 | Msa0301680:CDS | 55.0% | |
| GTGCTCTTCCCAGCTCCATT+GGG | - | chr2_3:58153049-58153068 | None:intergenic | 55.0% | |
| GGAGTCGCGTGATCTTTGCA+TGG | + | chr2_3:58153317-58153336 | Msa0301680:CDS | 55.0% | |
| ! | ATGGGATGGTGGCATGGTTC+TGG | + | chr2_3:58153435-58153454 | Msa0301680:CDS | 55.0% |
| ! | GTGTTGCTAGCTGCTTGAGG+TGG | + | chr2_3:58153668-58153687 | Msa0301680:three_prime_UTR | 55.0% |
| CGCTGCAAAGAGAGGAGGGA+AGG | + | chr2_3:58149724-58149743 | Msa0301680:CDS | 60.0% | |
| CTTCACCACCACCATCCTCC+TGG | - | chr2_3:58151608-58151627 | None:intergenic | 60.0% | |
| ! | GGAAGCATGTGTGTGGCTGG+AGG | + | chr2_3:58152541-58152560 | Msa0301680:CDS | 60.0% |
| GAAGCAGTACAGGTGGGAGC+AGG | + | chr2_3:58152733-58152752 | Msa0301680:CDS | 60.0% | |
| ! | GCGCGGTGGACTTACAGAGA+AGG | + | chr2_3:58152859-58152878 | Msa0301680:CDS | 60.0% |
| GGGTCCAACCAGAGCAATCC+TGG | - | chr2_3:58153029-58153048 | None:intergenic | 60.0% | |
| CTGGTTGGACCCAATGGAGC+TGG | + | chr2_3:58153037-58153056 | Msa0301680:CDS | 60.0% | |
| CGTGCTCTTCCCAGCTCCAT+TGG | - | chr2_3:58153050-58153069 | None:intergenic | 60.0% | |
| AAGGCAGCGTCTGTGATGCG+CGG | + | chr2_3:58153596-58153615 | Msa0301680:three_prime_UTR | 60.0% | |
| CCCTCCTCTCTTTGCAGCGG+CGG | - | chr2_3:58149723-58149742 | None:intergenic | 65.0% | |
| CCGCCGCTGCAAAGAGAGGA+GGG | + | chr2_3:58149720-58149739 | Msa0301680:CDS | 65.0% | |
| !! | AAAGGCGTCGGAGAAGGCGG+TGG | + | chr2_3:58149769-58149788 | Msa0301680:CDS | 65.0% |
| GCTGCCGCCGCTGCAAAGAG+AGG | + | chr2_3:58149716-58149735 | Msa0301680:CDS | 70.0% | |
| GCCGCCGCTGCAAAGAGAGG+AGG | + | chr2_3:58149719-58149738 | Msa0301680:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 58149405 | 58153927 | 58149405 | ID=Msa0301680;Name=Msa0301680 |
| chr2_3 | mRNA | 58149405 | 58153927 | 58149405 | ID=Msa0301680-mRNA-1;Parent=Msa0301680;Name=Msa0301680-mRNA-1;_AED=0.18;_eAED=0.18;_QI=195|0.83|0.85|1|0.83|0.71|7|333|607 |
| chr2_3 | exon | 58149405 | 58149589 | 58149405 | ID=Msa0301680-mRNA-1:exon:18709;Parent=Msa0301680-mRNA-1 |
| chr2_3 | exon | 58149664 | 58149883 | 58149664 | ID=Msa0301680-mRNA-1:exon:18710;Parent=Msa0301680-mRNA-1 |
| chr2_3 | exon | 58150961 | 58150996 | 58150961 | ID=Msa0301680-mRNA-1:exon:18711;Parent=Msa0301680-mRNA-1 |
| chr2_3 | exon | 58151125 | 58151198 | 58151125 | ID=Msa0301680-mRNA-1:exon:18712;Parent=Msa0301680-mRNA-1 |
| chr2_3 | exon | 58151307 | 58151517 | 58151307 | ID=Msa0301680-mRNA-1:exon:18713;Parent=Msa0301680-mRNA-1 |
| chr2_3 | exon | 58151609 | 58151843 | 58151609 | ID=Msa0301680-mRNA-1:exon:18714;Parent=Msa0301680-mRNA-1 |
| chr2_3 | exon | 58152537 | 58153927 | 58152537 | ID=Msa0301680-mRNA-1:exon:18715;Parent=Msa0301680-mRNA-1 |
| chr2_3 | five_prime_UTR | 58149405 | 58149589 | 58149405 | ID=Msa0301680-mRNA-1:five_prime_utr;Parent=Msa0301680-mRNA-1 |
| chr2_3 | five_prime_UTR | 58149664 | 58149673 | 58149664 | ID=Msa0301680-mRNA-1:five_prime_utr;Parent=Msa0301680-mRNA-1 |
| chr2_3 | CDS | 58149674 | 58149883 | 58149674 | ID=Msa0301680-mRNA-1:cds;Parent=Msa0301680-mRNA-1 |
| chr2_3 | CDS | 58150961 | 58150996 | 58150961 | ID=Msa0301680-mRNA-1:cds;Parent=Msa0301680-mRNA-1 |
| chr2_3 | CDS | 58151125 | 58151198 | 58151125 | ID=Msa0301680-mRNA-1:cds;Parent=Msa0301680-mRNA-1 |
| chr2_3 | CDS | 58151307 | 58151517 | 58151307 | ID=Msa0301680-mRNA-1:cds;Parent=Msa0301680-mRNA-1 |
| chr2_3 | CDS | 58151609 | 58151843 | 58151609 | ID=Msa0301680-mRNA-1:cds;Parent=Msa0301680-mRNA-1 |
| chr2_3 | CDS | 58152537 | 58153594 | 58152537 | ID=Msa0301680-mRNA-1:cds;Parent=Msa0301680-mRNA-1 |
| chr2_3 | three_prime_UTR | 58153595 | 58153927 | 58153595 | ID=Msa0301680-mRNA-1:three_prime_utr;Parent=Msa0301680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
