AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0043660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043660 MtrunA17_Chr1g0209711 98.222 731 12 1 1 730 1 731 0.0 1491
Msa0043660 MtrunA17_Chr6g0462181 34.576 590 350 8 14 594 102 664 1.21e-102 330
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043660 AT2G18220.1 63.623 657 216 5 49 689 63 712 0.0 843
Msa0043660 AT3G55510.1 32.957 531 345 6 72 595 63 589 7.13e-95 306
Msa0043660 AT3G55510.2 33.268 511 330 6 92 595 8 514 1.54e-93 301

Find 162 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGGTGTCTCTTCATTTC+TGG 0.080261 1_1:-74950739 Msa0043660:intron
TGCCCCTGATATTTGTATTT+TGG 0.125857 1_1:-74947732 Msa0043660:three_prime_UTR
TGCATAGATGATTGCTTTAA+AGG 0.165421 1_1:-74950641 Msa0043660:CDS
TGCAAATCAATTAAAGAAAA+TGG 0.219753 1_1:-74951566 Msa0043660:CDS
ACCAGTATCTATGCTCCTTT+TGG 0.248004 1_1:-74949884 Msa0043660:CDS
GAGAATTCAATTTCAATATC+AGG 0.300343 1_1:-74947788 Msa0043660:three_prime_UTR
TTGTTGAAGCTTCCTGCTTC+TGG 0.303506 1_1:-74951377 Msa0043660:CDS
GTTTCAACACAAATTGATAA+AGG 0.306891 1_1:-74953622 Msa0043660:intron
TCAGGTGTCTCTTCATTTCT+GGG 0.315570 1_1:-74950738 Msa0043660:intron
CAGTCCAAAATACAAATATC+AGG 0.318036 1_1:+74947728 None:intergenic
GAGTTACTCTGTTGGGTTCA+TGG 0.318367 1_1:-74949611 Msa0043660:CDS
TAAAGTTATAACCACTTCTA+TGG 0.321812 1_1:-74951600 Msa0043660:CDS
AAAATATTCTTCATTGTTGT+TGG 0.346316 1_1:-74951207 Msa0043660:CDS
TCTCTTCATTTCTGGGGTAC+TGG 0.358919 1_1:-74950731 Msa0043660:CDS
GAGCAATACTTGTCATTTCC+AGG 0.362820 1_1:+74948504 None:intergenic
AGTTCCATCCACGTTCTCTT+TGG 0.366087 1_1:+74948551 None:intergenic
TCATTAACTCTCTTGAGCTT+TGG 0.367280 1_1:-74950080 Msa0043660:CDS
AAAAGTTCGAATAGAGATAA+AGG 0.369450 1_1:+74948049 None:intergenic
ACAAAACAATGGAGGACTTA+TGG 0.370348 1_1:-74951320 Msa0043660:CDS
AGACAAAGCATAAAACAAAA+AGG 0.374855 1_1:-74948155 Msa0043660:CDS
CTGTCCTAAAAGCCCTCATC+AGG 0.374975 1_1:+74951522 None:intergenic
GATGATGCCGCAGGATCATT+AGG 0.378915 1_1:+74949335 None:intergenic
CACTGTGGAGTTACTCTGTT+GGG 0.380617 1_1:-74949618 Msa0043660:CDS
CAAGGTAGGACTTCACAATA+TGG 0.381844 1_1:+74951297 None:intergenic
AAAATTTCCAGTGTTCTTGT+TGG 0.383029 1_1:-74948645 Msa0043660:intron
GTACCTTGATATATTTCCTT+AGG 0.386131 1_1:+74951168 None:intergenic
ATATCAGGGGCAACTTGGTC+TGG 0.392103 1_1:+74947743 None:intergenic
CGGCTAGGTACTTTCCCCTT+AGG 0.413546 1_1:-74949960 Msa0043660:CDS
CATTTCTGGGGTACTGGTGG+AGG 0.417756 1_1:-74950725 Msa0043660:CDS
CTTTGCCAATGCCTCCTGTA+GGG 0.419106 1_1:+74949830 None:intergenic
TCTTCGAAACCTTTCAACTT+TGG 0.426560 1_1:+74949540 None:intergenic
GTTTCACAGCATTTACGAAA+TGG 0.429053 1_1:+74950591 None:intergenic
GCAGAAGGGCTGTCGCTTGA+AGG 0.432094 1_1:+74948228 None:intergenic
TACAAATATCAGGGGCAACT+TGG 0.432308 1_1:+74947738 None:intergenic
AACTGCGTCATTGAACTTCT+CGG 0.432785 1_1:-74950545 Msa0043660:CDS
GTTGACTGTACTTAATGAAA+TGG 0.436589 1_1:-74951417 Msa0043660:CDS
GCAAATCAATTAAAGAAAAT+GGG 0.446925 1_1:-74951565 Msa0043660:CDS
CCCTTAGGTTGAGATGTATC+CGG 0.448152 1_1:-74949945 Msa0043660:CDS
TAGATACTGGTACAAAAGAA+TGG 0.450220 1_1:+74949896 None:intergenic
TTTAGGACAGCATGCCACTA+TGG 0.450538 1_1:-74951509 Msa0043660:CDS
TCACTGAACTTAAGCAGATC+CGG 0.454118 1_1:+74952754 None:intergenic
GTCAATAATCTTTACTTCCA+AGG 0.454126 1_1:+74947970 None:intergenic
TGATTTACGCAGCATATTGA+AGG 0.459394 1_1:-74949803 Msa0043660:intron
TTGTGCATCTGTATTGGATC+TGG 0.460491 1_1:-74950665 Msa0043660:CDS
TTTAGCTCATCCTGGTTACC+TGG 0.468220 1_1:-74948522 Msa0043660:CDS
CAGCAATCTGGTTCAACATC+CGG 0.468912 1_1:+74949926 None:intergenic
CGCAGGATCATTAGGTAGAA+AGG 0.471731 1_1:+74949343 None:intergenic
TCAAGCGACAGCCCTTCTGC+CGG 0.472007 1_1:-74948225 Msa0043660:CDS
AGGAATAAATCTCACACCTA+AGG 0.472641 1_1:-74948126 Msa0043660:exon
AAGTTGCGCAACCTCACAAT+TGG 0.474304 1_1:+74949574 None:intergenic
TCCAAAAGGAGCATAGATAC+TGG 0.475479 1_1:+74949883 None:intergenic
CCACTTCTATGGTTGATTTG+TGG 0.479032 1_1:-74951589 Msa0043660:CDS
CTTGTCATTTCCAGGTAACC+AGG 0.479894 1_1:+74948512 None:intergenic
CTTCATTTCTGGGGTACTGG+TGG 0.480769 1_1:-74950728 Msa0043660:CDS
TGCGGTTCGTTCCCTGATGA+GGG 0.483874 1_1:-74951534 Msa0043660:CDS
ATGAATAGACACGAAACAAC+AGG 0.485209 1_1:+74950695 None:intergenic
AATGGGTAGAAGCAGCAATC+TGG 0.490303 1_1:+74949914 None:intergenic
TGATGATGTTGTGGAGGACT+TGG 0.492880 1_1:-74948280 Msa0043660:CDS
TGGAAGAAAAGAGATCATAA+TGG 0.493687 1_1:-74951354 Msa0043660:CDS
TGTTTACTGTTCAATTGTCA+AGG 0.495153 1_1:-74947909 Msa0043660:three_prime_UTR
ATGCGGTTCGTTCCCTGATG+AGG 0.495163 1_1:-74951535 Msa0043660:CDS
AAGTGCATCCCTTAAAATCA+TGG 0.500234 1_1:+74950469 None:intergenic
AGAGAGTTGTGCATCTGTAT+TGG 0.501253 1_1:-74950671 Msa0043660:CDS
CAAGCGACAGCCCTTCTGCC+GGG 0.504148 1_1:-74948224 Msa0043660:CDS
GCTCCTAAGGAAATATATCA+AGG 0.505109 1_1:-74951171 Msa0043660:intron
TCCGGATACATCTCAACCTA+AGG 0.506348 1_1:+74949944 None:intergenic
CCATCGTGTTGCAATGAAAA+CGG 0.507192 1_1:+74953674 None:intergenic
CTGCTGCATTTAGCTCATCC+TGG 0.510196 1_1:-74948530 Msa0043660:CDS
AAAAGCGGCGGTGAAGGAAA+TGG 0.511812 1_1:-74953644 Msa0043660:CDS
GCAAATTGACCAAAGTTGAA+AGG 0.512230 1_1:-74949549 Msa0043660:CDS
ACGACTCATTAAAGGAATCC+AGG 0.512258 1_1:-74948756 Msa0043660:intron
TTGAAGCTTCCTGCTTCTGG+TGG 0.513192 1_1:-74951374 Msa0043660:CDS
CAACAGCCTACTGAACCAAA+AGG 0.514963 1_1:-74948342 Msa0043660:CDS
AGATACTGGTACAAAAGAAT+GGG 0.517124 1_1:+74949897 None:intergenic
TTTCATTGCAACACGATGGT+TGG 0.518623 1_1:-74953670 Msa0043660:exon
ATTGACATATCTAAATGTAA+TGG 0.519654 1_1:-74947953 Msa0043660:three_prime_UTR
CTCCACAACATCATCATCAA+TGG 0.522343 1_1:+74948287 None:intergenic
TTCTGTGGTTGAAGAACTTG+CGG 0.526193 1_1:-74949650 Msa0043660:CDS
TGGGGATGTTGAAGTTGAAG+AGG 0.526374 1_1:+74953741 None:intergenic
GTGGATGATGACATGGAAGA+TGG 0.527004 1_1:-74951689 Msa0043660:CDS
TGGAAGAAAAGCGGCGGTGA+AGG 0.528144 1_1:-74953650 Msa0043660:CDS
CAGAGTAACTCCACAGTGCT+AGG 0.529878 1_1:+74949623 None:intergenic
AATGCCCGTGTCTTAAGAGT+TGG 0.530371 1_1:+74949691 None:intergenic
AGTCCAAAATACAAATATCA+GGG 0.533063 1_1:+74947729 None:intergenic
GAAATGGCAATTCAAAACAT+AGG 0.534559 1_1:+74950607 None:intergenic
TTTGCCAATGCCTCCTGTAG+GGG 0.535188 1_1:+74949831 None:intergenic
CAGTCATTTGATTCAAAATG+TGG 0.535572 1_1:+74951264 None:intergenic
GTTTACTGTTCAATTGTCAA+GGG 0.539017 1_1:-74947908 Msa0043660:three_prime_UTR
GGAGGATACTAAAGAGAATG+AGG 0.540305 1_1:-74948577 Msa0043660:CDS
CAGGTGTCTCTTCATTTCTG+GGG 0.543367 1_1:-74950737 Msa0043660:CDS
GCTTTGCCAATGCCTCCTGT+AGG 0.545538 1_1:+74949829 None:intergenic
GCACTGTGGAGTTACTCTGT+TGG 0.548474 1_1:-74949619 Msa0043660:CDS
GATTGAAGCAAAGCAACATA+AGG 0.549356 1_1:-74953453 Msa0043660:CDS
GCAGTAGATTAACGTGCGGT+GGG 0.554065 1_1:-74953782 Msa0043660:five_prime_UTR
ATATATTTCCTTAGGAGCGA+AGG 0.556004 1_1:+74951176 None:intergenic
TCTCATCATCATCACCATAG+TGG 0.557196 1_1:+74951495 None:intergenic
CACTGAACTTAAGCAGATCC+GGG 0.560310 1_1:+74952755 None:intergenic
TGATATCATTTACTTTACAT+CGG 0.560340 1_1:-74951232 Msa0043660:CDS
TCATCTCCAGCATATCCAAA+AGG 0.562573 1_1:+74949869 None:intergenic
CCGGATACATCTCAACCTAA+GGG 0.564014 1_1:+74949945 None:intergenic
TTGCCAATGCCTCCTGTAGG+GGG 0.564018 1_1:+74949832 None:intergenic
CCTAGCCGTGGGAACTAGAC+GGG 0.565672 1_1:+74949975 None:intergenic
ATATTAGAGATTAATGTGGA+TGG 0.567480 1_1:-74953521 Msa0043660:intron
CTACTGAACCAAAAGGAAAG+AGG 0.572500 1_1:-74948335 Msa0043660:CDS
TGCCATTGATGATGATGTTG+TGG 0.573586 1_1:-74948289 Msa0043660:CDS
GGAATAAATCTCACACCTAA+GGG 0.576466 1_1:-74948125 Msa0043660:exon
GATGCCAAAGAGAACGTGGA+TGG 0.579919 1_1:-74948555 Msa0043660:CDS
AGCAGTAGATTAACGTGCGG+TGG 0.581881 1_1:-74953783 Msa0043660:five_prime_UTR
AAAGGTTTCGAAGAGAAATG+AGG 0.583015 1_1:-74949531 Msa0043660:CDS
TCTTTAGCGTGTAAGCTGGT+AGG 0.584788 1_1:-74947829 Msa0043660:three_prime_UTR
AATCTCTTTAGCGTGTAAGC+TGG 0.588084 1_1:-74947833 Msa0043660:three_prime_UTR
ACTGTACTTAATGAAATGGA+TGG 0.588834 1_1:-74951413 Msa0043660:CDS
TAAGACACGGGCATTTCAAG+AGG 0.589841 1_1:-74949683 Msa0043660:CDS
CTTTGCTTCAATCACAACCG+TGG 0.591835 1_1:+74953463 None:intergenic
AAATGTGGAGAGCATTTCCA+AGG 0.591878 1_1:+74951279 None:intergenic
CATGGAAGATGGAGAACCAC+AGG 0.594124 1_1:-74951678 Msa0043660:CDS
ATATCTAAATGTAATGGCGG+CGG 0.595353 1_1:-74947947 Msa0043660:three_prime_UTR
GATTATATTAGAGATTAATG+TGG 0.595537 1_1:-74953525 Msa0043660:intron
CATATTGTGAAGTCCTACCT+TGG 0.595814 1_1:-74951296 Msa0043660:CDS
TCAAGAAAAGATGATGCCGC+AGG 0.596185 1_1:+74949326 None:intergenic
CCACAAATCAACCATAGAAG+TGG 0.600691 1_1:+74951589 None:intergenic
TGAGAAGGCTATTGAGCATG+AGG 0.603012 1_1:-74951651 Msa0043660:CDS
CTTTCTACCTAATGATCCTG+CGG 0.603597 1_1:-74949342 Msa0043660:CDS
GTGGAGAGCATTTCCAAGGT+AGG 0.605480 1_1:+74951283 None:intergenic
GACATATCTAAATGTAATGG+CGG 0.605589 1_1:-74947950 Msa0043660:three_prime_UTR
TGAGCATGAGGTTCAAGCAA+AGG 0.611999 1_1:-74951639 Msa0043660:CDS
AGAACCACAGGTAGATGAGA+AGG 0.612954 1_1:-74951666 Msa0043660:CDS
ATACTTTGATAGTGCACTAG+AGG 0.618108 1_1:+74948813 None:intergenic
ACCTAGCCGTGGGAACTAGA+CGG 0.618655 1_1:+74949974 None:intergenic
ATAGCCTTCTCATCTACCTG+TGG 0.620098 1_1:+74951662 None:intergenic
TCAGGGGCAACTTGGTCTGG+AGG 0.620373 1_1:+74947746 None:intergenic
AGAATCAGCAAGTGATGAGG+AGG 0.621827 1_1:-74948595 Msa0043660:CDS
GCAAGCCAACTCTTAAGACA+CGG 0.624117 1_1:-74949696 Msa0043660:CDS
CAACTGTCGAATGAAAATGA+AGG 0.625145 1_1:+74950493 None:intergenic
TGAAGAATCAGCAAGTGATG+AGG 0.631498 1_1:-74948598 Msa0043660:CDS
CGTCATTGAACTTCTCGGAG+TGG 0.634980 1_1:-74950540 Msa0043660:CDS
CCCGTCTAGTTCCCACGGCT+AGG 0.635585 1_1:-74949975 Msa0043660:CDS
ATTTGATGACTACAAAACAA+TGG 0.635609 1_1:-74951331 Msa0043660:CDS
AAGGGGAAAGTACCTAGCCG+TGG 0.636588 1_1:+74949963 None:intergenic
AAGGCGTGTTGATATGCAGT+CGG 0.638450 1_1:+74950512 None:intergenic
GGAAGATGTGGATGATGACA+TGG 0.639734 1_1:-74951696 Msa0043660:CDS
CAGATTGTGAACTATAAGCA+CGG 0.640362 1_1:+74950046 None:intergenic
GTCCAAAATACAAATATCAG+GGG 0.644715 1_1:+74947730 None:intergenic
TGAGGATGCCAAAGAGAACG+TGG 0.646565 1_1:-74948559 Msa0043660:CDS
AGGGGAAAGTACCTAGCCGT+GGG 0.649443 1_1:+74949964 None:intergenic
CACGATGGTTGGAAGAAAAG+CGG 0.651121 1_1:-74953659 Msa0043660:exon
AGAAAATGGGAGCTTAAATG+CGG 0.652168 1_1:-74951552 Msa0043660:CDS
CAAGCCAACTCTTAAGACAC+GGG 0.654132 1_1:-74949695 Msa0043660:CDS
AGTAGCCCGTCTAGTTCCCA+CGG 0.654607 1_1:-74949980 Msa0043660:CDS
AATAGAAAATCTTCAGCACA+AGG 0.655625 1_1:-74953426 Msa0043660:intron
TAGACACGAAACAACAGGAA+GGG 0.657156 1_1:+74950700 None:intergenic
CGGATACATCTCAACCTAAG+GGG 0.658910 1_1:+74949946 None:intergenic
CATTGATGATGATGTTGTGG+AGG 0.661802 1_1:-74948286 Msa0043660:CDS
AATGAGGCAGCTTATTCGCG+AGG 0.672768 1_1:-74949515 Msa0043660:intron
AGATGAATGATGATCAACAT+CGG 0.678740 1_1:+74948194 None:intergenic
TGTCCTAAAAGCCCTCATCA+GGG 0.678828 1_1:+74951523 None:intergenic
GTACTTGAAAGAGAATGACC+CGG 0.684135 1_1:-74952773 Msa0043660:CDS
TGATGACTACAAAACAATGG+AGG 0.690281 1_1:-74951328 Msa0043660:CDS
ATAGACACGAAACAACAGGA+AGG 0.702686 1_1:+74950699 None:intergenic
TTGCGGAACACCTAGCACTG+TGG 0.724336 1_1:-74949633 Msa0043660:CDS
GATGGTTGGAAGAAAAGCGG+CGG 0.728380 1_1:-74953656 Msa0043660:CDS
TGTAGCAGTAGATTAACGTG+CGG 0.750832 1_1:-74953786 Msa0043660:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTACCTTTTATATATTTAT+TGG - chr1_1:74948648-74948667 Msa0043660:intron 10.0%
!!! TTACCTTTTATATATTTATT+GGG - chr1_1:74948649-74948668 Msa0043660:intron 10.0%
!!! TTTTTGACAATTTTATTTTA+TGG - chr1_1:74951333-74951352 Msa0043660:CDS 10.0%
!! AAACTTATATTTAGCTATTA+AGG + chr1_1:74948432-74948451 None:intergenic 15.0%
!! AAAAAGGAAAAAGAAATATT+GGG + chr1_1:74949067-74949086 None:intergenic 15.0%
!! AAAAAAGGAAAAAGAAATAT+TGG + chr1_1:74949068-74949087 None:intergenic 15.0%
!! AAAATTAAATTTGTAGTGAT+TGG + chr1_1:74949333-74949352 None:intergenic 15.0%
!!! AAATTTTCTATCTTGATTAA+AGG + chr1_1:74949520-74949539 None:intergenic 15.0%
!!! TTAATCAAGATAGAAAATTT+TGG - chr1_1:74949520-74949539 Msa0043660:CDS 15.0%
!! AAATTAAGAATAGTATCATT+CGG - chr1_1:74950590-74950609 Msa0043660:CDS 15.0%
!! TGATAAAAGTAAAACATAAA+AGG + chr1_1:74952040-74952059 None:intergenic 15.0%
!!! TTATGTTTTACTTTTATCAT+TGG - chr1_1:74952041-74952060 Msa0043660:intron 15.0%
!! TAAAATAAAGGAAAAGAAAA+TGG + chr1_1:74952539-74952558 None:intergenic 15.0%
!! CACTTGATATAATAAAATAA+AGG + chr1_1:74952551-74952570 None:intergenic 15.0%
!! TACAATTCTCAAATATAAAT+GGG + chr1_1:74952634-74952653 None:intergenic 15.0%
!! TTACAATTCTCAAATATAAA+TGG + chr1_1:74952635-74952654 None:intergenic 15.0%
!!! TATCATATAACTTTTGTTTT+TGG + chr1_1:74953654-74953673 None:intergenic 15.0%
!! AGAAAAATGAAAAAGAATTG+GGG + chr1_1:74947786-74947805 None:intergenic 20.0%
!! CAGAAAAATGAAAAAGAATT+GGG + chr1_1:74947787-74947806 None:intergenic 20.0%
!! GATTATATTAGAGATTAATG+TGG - chr1_1:74947981-74948000 Msa0043660:three_prime_UTR 20.0%
!! ACAATGTAATGTAATGTAAT+GGG + chr1_1:74948111-74948130 None:intergenic 20.0%
!! AACAATGTAATGTAATGTAA+TGG + chr1_1:74948112-74948131 None:intergenic 20.0%
!! TAGCCCAATAAATATATAAA+AGG + chr1_1:74948655-74948674 None:intergenic 20.0%
!! TACATTAATTGAGATGAATA+TGG - chr1_1:74948840-74948859 Msa0043660:intron 20.0%
!!! ACTTTTGTTTGTTTTGTATT+AGG - chr1_1:74949003-74949022 Msa0043660:intron 20.0%
!!! TTGTATTTTTTTAGACCTAT+AGG - chr1_1:74949366-74949385 Msa0043660:CDS 20.0%
!! TATATAACATAACAGCAAAA+AGG + chr1_1:74949609-74949628 None:intergenic 20.0%
!!! TTTTTGCTGTTATGTTATAT+AGG - chr1_1:74949608-74949627 Msa0043660:CDS 20.0%
!! TGCAAATCAATTAAAGAAAA+TGG - chr1_1:74949940-74949959 Msa0043660:CDS 20.0%
!! GCAAATCAATTAAAGAAAAT+GGG - chr1_1:74949941-74949960 Msa0043660:CDS 20.0%
!! TGATATCATTTACTTTACAT+CGG - chr1_1:74950274-74950293 Msa0043660:intron 20.0%
!! AAAATATTCTTCATTGTTGT+TGG - chr1_1:74950299-74950318 Msa0043660:intron 20.0%
!! TGATTAAAAAGCTTAATAGA+TGG - chr1_1:74950500-74950519 Msa0043660:CDS 20.0%
!!! AACTAAATTTTTCTGAAATC+TGG - chr1_1:74950532-74950551 Msa0043660:CDS 20.0%
!! TTAACATATGTCTATTCATT+TGG - chr1_1:74950721-74950740 Msa0043660:CDS 20.0%
!! AGTAAACAAATGAATGAAAA+AGG + chr1_1:74952282-74952301 None:intergenic 20.0%
!! TATAGAAGTTTATTTGCTTA+AGG + chr1_1:74952371-74952390 None:intergenic 20.0%
!! TTAAGCAAATAAACTTCTAT+AGG - chr1_1:74952370-74952389 Msa0043660:intron 20.0%
!!! GCTATTAAGTTATTTCATTT+TGG - chr1_1:74952434-74952453 Msa0043660:intron 20.0%
!!! TTCTTTTTACTTTTTATCTG+AGG - chr1_1:74953118-74953137 Msa0043660:intron 20.0%
!! ATAAAACAAAAAGGTTGAAA+AGG - chr1_1:74953360-74953379 Msa0043660:intron 20.0%
!!! AATTGTTTTCTATTTTACCT+TGG - chr1_1:74953519-74953538 Msa0043660:intron 20.0%
!! ATTGACATATCTAAATGTAA+TGG - chr1_1:74953553-74953572 Msa0043660:intron 20.0%
! GCAGAAAAATGAAAAAGAAT+TGG + chr1_1:74947788-74947807 None:intergenic 25.0%
! GTTTCAACACAAATTGATAA+AGG - chr1_1:74947884-74947903 Msa0043660:three_prime_UTR 25.0%
! ATATTAGAGATTAATGTGGA+TGG - chr1_1:74947985-74948004 Msa0043660:three_prime_UTR 25.0%
!!! TTAAATGTCTGAGCTATTTT+CGG - chr1_1:74948239-74948258 Msa0043660:CDS 25.0%
! AAACAAGACAGATATTAGAT+AGG + chr1_1:74948812-74948831 None:intergenic 25.0%
!!! AGAATTTTTTTCCCATATCT+AGG + chr1_1:74948940-74948959 None:intergenic 25.0%
!!! CTTTTTCGGATGAAAAAAAA+AGG + chr1_1:74949083-74949102 None:intergenic 25.0%
!!! CTTTTTTTTTCATCCGAAAA+AGG - chr1_1:74949081-74949100 Msa0043660:intron 25.0%
!! TTCCATTTTGTGTTCATTAT+TGG - chr1_1:74949300-74949319 Msa0043660:intron 25.0%
! TACCAATAATGAACACAAAA+TGG + chr1_1:74949305-74949324 None:intergenic 25.0%
! TTAAATTTGTAGTGATTGGT+GGG + chr1_1:74949329-74949348 None:intergenic 25.0%
! ATTAAATTTGTAGTGATTGG+TGG + chr1_1:74949330-74949349 None:intergenic 25.0%
! CTAAAAGATTTATAGCCTAT+AGG + chr1_1:74949384-74949403 None:intergenic 25.0%
!! CTATAGGCTATAAATCTTTT+AGG - chr1_1:74949382-74949401 Msa0043660:CDS 25.0%
!!! GCTATAAATCTTTTAGGTTA+AGG - chr1_1:74949388-74949407 Msa0043660:CDS 25.0%
!!! AATCTTTTAGGTTAAGGTTA+TGG - chr1_1:74949394-74949413 Msa0043660:intron 25.0%
! ATTTAGTAATGCATGCAAAT+AGG + chr1_1:74949725-74949744 None:intergenic 25.0%
! TAAAGTTATAACCACTTCTA+TGG - chr1_1:74949906-74949925 Msa0043660:CDS 25.0%
!! ATTTGATGACTACAAAACAA+TGG - chr1_1:74950175-74950194 Msa0043660:intron 25.0%
!!! CATTAGTACTTTAAAGTTTG+TGG - chr1_1:74950413-74950432 Msa0043660:intron 25.0%
!! TTCTTAATTTTGTTCGAGTA+CGG + chr1_1:74950580-74950599 None:intergenic 25.0%
! ACTTTCTTGTTGAAATTATC+AGG - chr1_1:74950750-74950769 Msa0043660:intron 25.0%
! TGCACTTAATACAAAAACTA+AGG - chr1_1:74951053-74951072 Msa0043660:intron 25.0%
! TACTCATTACTAATGAGATA+CGG + chr1_1:74951224-74951243 None:intergenic 25.0%
! ATCTCATTAGTAATGAGTAA+AGG - chr1_1:74951225-74951244 Msa0043660:CDS 25.0%
! CGAATAAAACAAATCTATCA+AGG + chr1_1:74951268-74951287 None:intergenic 25.0%
!!! TTGTTTTATTCGTGTTTGAT+TGG - chr1_1:74951276-74951295 Msa0043660:CDS 25.0%
!! AAGAATACCTTTAAAAGGTT+AGG + chr1_1:74951777-74951796 None:intergenic 25.0%
! TATGCAAGAATACCTTTAAA+AGG + chr1_1:74951782-74951801 None:intergenic 25.0%
!!! TAAAGGTATTCTTGCATATT+AGG - chr1_1:74951784-74951803 Msa0043660:intron 25.0%
!!! AGATTTTCTCTTTACTTTTG+AGG - chr1_1:74952212-74952231 Msa0043660:intron 25.0%
!! AAGGAAAAAAGTTTTTATGC+AGG + chr1_1:74952352-74952371 None:intergenic 25.0%
!!! TTCATTTTGGTCTATATATC+TGG - chr1_1:74952447-74952466 Msa0043660:intron 25.0%
!! TTTAAAGTAAAGTGACATTG+AGG + chr1_1:74952604-74952623 None:intergenic 25.0%
! ACAAAAAAACGACTCATTAA+AGG - chr1_1:74952742-74952761 Msa0043660:CDS 25.0%
!! GTGAATTTAAAATTCAAACC+TGG + chr1_1:74952771-74952790 None:intergenic 25.0%
! AGACAAAGCATAAAACAAAA+AGG - chr1_1:74953351-74953370 Msa0043660:intron 25.0%
! AAAAGTTCGAATAGAGATAA+AGG + chr1_1:74953460-74953479 None:intergenic 25.0%
!! ATCTCTATTCGAACTTTTAT+TGG - chr1_1:74953462-74953481 Msa0043660:CDS 25.0%
!! TCTCTATTCGAACTTTTATT+GGG - chr1_1:74953463-74953482 Msa0043660:CDS 25.0%
! GAGAATTCAATTTCAATATC+AGG - chr1_1:74953718-74953737 Msa0043660:five_prime_UTR 25.0%
! AGTCCAAAATACAAATATCA+GGG + chr1_1:74953780-74953799 None:intergenic 25.0%
AAAGAGCAAGAAAAATTCCA+CGG - chr1_1:74948026-74948045 Msa0043660:three_prime_UTR 30.0%
AATAGAAAATCTTCAGCACA+AGG - chr1_1:74948080-74948099 Msa0043660:three_prime_UTR 30.0%
! CTTTGCTTGTTCTTATTTGA+AGG - chr1_1:74948166-74948185 Msa0043660:CDS 30.0%
AGAGATAAACATTGCTTGAA+AGG + chr1_1:74948458-74948477 None:intergenic 30.0%
TTCAAGCAATGTTTATCTCT+AGG - chr1_1:74948458-74948477 Msa0043660:intron 30.0%
GTATGTGTGAAATTTGAACT+AGG - chr1_1:74948609-74948628 Msa0043660:CDS 30.0%
AAATACACATCTCACATCAA+TGG + chr1_1:74948883-74948902 None:intergenic 30.0%
!!! TTTTTTTCCCATATCTAGGA+TGG + chr1_1:74948936-74948955 None:intergenic 30.0%
! TGTTTTGTATTAGGAAGATG+TGG - chr1_1:74949012-74949031 Msa0043660:intron 30.0%
! GTTTTGTATTAGGAAGATGT+GGG - chr1_1:74949013-74949032 Msa0043660:intron 30.0%
CACAACGAAATGTAAATTCA+AGG - chr1_1:74949169-74949188 Msa0043660:intron 30.0%
GTGTCTTCTCAAAATCTAAT+AGG + chr1_1:74949424-74949443 None:intergenic 30.0%
!! TTAGATTTTGAGAAGACACT+TGG - chr1_1:74949425-74949444 Msa0043660:intron 30.0%
!! TAGATTTTGAGAAGACACTT+GGG - chr1_1:74949426-74949445 Msa0043660:intron 30.0%
AATCTCTTGTAAGCTATAGA+TGG - chr1_1:74949470-74949489 Msa0043660:intron 30.0%
GTTGACTGTACTTAATGAAA+TGG - chr1_1:74950089-74950108 Msa0043660:CDS 30.0%
ACTGTACTTAATGAAATGGA+TGG - chr1_1:74950093-74950112 Msa0043660:CDS 30.0%
TGGAAGAAAAGAGATCATAA+TGG - chr1_1:74950152-74950171 Msa0043660:intron 30.0%
CAGTCATTTGATTCAAAATG+TGG + chr1_1:74950245-74950264 None:intergenic 30.0%
GTACCTTGATATATTTCCTT+AGG + chr1_1:74950341-74950360 None:intergenic 30.0%
TCAAGGTACAAATAGTTCAT+TGG - chr1_1:74950352-74950371 Msa0043660:intron 30.0%
! TTTTGTAGTGAACAATGATG+AGG + chr1_1:74950381-74950400 None:intergenic 30.0%
! CCAGAAGTATATACTTACAA+GGG + chr1_1:74950644-74950663 None:intergenic 30.0%
! ACCAGAAGTATATACTTACA+AGG + chr1_1:74950645-74950664 None:intergenic 30.0%
! TTCTGGTAATGTGAATGAAA+AGG - chr1_1:74950658-74950677 Msa0043660:CDS 30.0%
TGCATAGATGATTGCTTTAA+AGG - chr1_1:74950865-74950884 Msa0043660:intron 30.0%
GAAATGGCAATTCAAAACAT+AGG + chr1_1:74950902-74950921 None:intergenic 30.0%
GATAGATCAATTGTTAGGAT+TGG + chr1_1:74951179-74951198 None:intergenic 30.0%
! TTCGTCTGAATGTTTTCTTT+AGG - chr1_1:74951373-74951392 Msa0043660:CDS 30.0%
GGCTACTCCAAAAATTATTT+GGG + chr1_1:74951513-74951532 None:intergenic 30.0%
AGATACTGGTACAAAAGAAT+GGG + chr1_1:74951612-74951631 None:intergenic 30.0%
TAGATACTGGTACAAAAGAA+TGG + chr1_1:74951613-74951632 None:intergenic 30.0%
! AAATCCACCTAACCTTTTAA+AGG - chr1_1:74951767-74951786 Msa0043660:intron 30.0%
! AATACCTTTAAAAGGTTAGG+TGG + chr1_1:74951774-74951793 None:intergenic 30.0%
! TGTCTTTTATTCCAATTGTG+AGG - chr1_1:74951921-74951940 Msa0043660:intron 30.0%
!! AGTATTGATTGTTTCCTTGT+TGG - chr1_1:74952245-74952264 Msa0043660:intron 30.0%
!! ACAGTCAACTTGATTTTGAT+AGG - chr1_1:74952655-74952674 Msa0043660:intron 30.0%
! TGATAATGATGTATGCATGT+TGG + chr1_1:74952818-74952837 None:intergenic 30.0%
AAAATTTCCAGTGTTCTTGT+TGG - chr1_1:74952861-74952880 Msa0043660:intron 30.0%
AGATGAATGATGATCAACAT+CGG + chr1_1:74953315-74953334 None:intergenic 30.0%
!! TTGTTTTATGCTTTGTCTTG+CGG + chr1_1:74953349-74953368 None:intergenic 30.0%
GTCAATAATCTTTACTTCCA+AGG + chr1_1:74953539-74953558 None:intergenic 30.0%
GACATATCTAAATGTAATGG+CGG - chr1_1:74953556-74953575 Msa0043660:intron 30.0%
TGTTTACTGTTCAATTGTCA+AGG - chr1_1:74953597-74953616 Msa0043660:intron 30.0%
GTTTACTGTTCAATTGTCAA+GGG - chr1_1:74953598-74953617 Msa0043660:intron 30.0%
GTCCAAAATACAAATATCAG+GGG + chr1_1:74953779-74953798 None:intergenic 30.0%
CAGTCCAAAATACAAATATC+AGG + chr1_1:74953781-74953800 None:intergenic 30.0%
GATTGAAGCAAAGCAACATA+AGG - chr1_1:74948053-74948072 Msa0043660:three_prime_UTR 35.0%
TAGACATATTGCATGTCCAT+AGG - chr1_1:74948514-74948533 Msa0043660:CDS 35.0%
AGACATATTGCATGTCCATA+GGG - chr1_1:74948515-74948534 Msa0043660:CDS 35.0%
ACAAGTAAAGGTTTCAGTGA+AGG - chr1_1:74948553-74948572 Msa0043660:CDS 35.0%
TGTGTGAAATTTGAACTAGG+TGG - chr1_1:74948612-74948631 Msa0043660:CDS 35.0%
! TTAACAACCTTTTCCATTGC+AGG - chr1_1:74948694-74948713 Msa0043660:intron 35.0%
TAAAAATCTTCGTCCTGCAA+TGG + chr1_1:74948710-74948729 None:intergenic 35.0%
TTCTAATGCCATCCTAGATA+TGG - chr1_1:74948925-74948944 Msa0043660:intron 35.0%
TCTAATGCCATCCTAGATAT+GGG - chr1_1:74948926-74948945 Msa0043660:intron 35.0%
AAATGCTAACATGTGCTCTA+AGG - chr1_1:74949193-74949212 Msa0043660:intron 35.0%
AATGCTAACATGTGCTCTAA+GGG - chr1_1:74949194-74949213 Msa0043660:intron 35.0%
!! AGATTTTGAGAAGACACTTG+GGG - chr1_1:74949427-74949446 Msa0043660:intron 35.0%
! TTGTGTGTTTGCTGGTAAAT+TGG - chr1_1:74949550-74949569 Msa0043660:CDS 35.0%
! GTGCAGTGATCATAATTTGT+AGG - chr1_1:74949656-74949675 Msa0043660:CDS 35.0%
TGTAGGAAATCTCAAGAGAT+TGG - chr1_1:74949673-74949692 Msa0043660:CDS 35.0%
! TTCTTTTATCCAGGAAGATG+TGG - chr1_1:74949798-74949817 Msa0043660:intron 35.0%
AGAAAATGGGAGCTTAAATG+CGG - chr1_1:74949954-74949973 Msa0043660:CDS 35.0%
TGATGACTACAAAACAATGG+AGG - chr1_1:74950178-74950197 Msa0043660:intron 35.0%
ACAAAACAATGGAGGACTTA+TGG - chr1_1:74950186-74950205 Msa0043660:intron 35.0%
ATATATTTCCTTAGGAGCGA+AGG + chr1_1:74950333-74950352 None:intergenic 35.0%
GCTCCTAAGGAAATATATCA+AGG - chr1_1:74950335-74950354 Msa0043660:intron 35.0%
TGAATATGTCTTCCAATGCT+TGG - chr1_1:74950444-74950463 Msa0043660:intron 35.0%
CCCTTGTAAGTATATACTTC+TGG - chr1_1:74950641-74950660 Msa0043660:CDS 35.0%
!! AAGAACATTTGTGACTTGCT+AGG - chr1_1:74950691-74950710 Msa0043660:CDS 35.0%
ATGAATAGACACGAAACAAC+AGG + chr1_1:74950814-74950833 None:intergenic 35.0%
GTTTCACAGCATTTACGAAA+TGG + chr1_1:74950918-74950937 None:intergenic 35.0%
CAACTGTCGAATGAAAATGA+AGG + chr1_1:74951016-74951035 None:intergenic 35.0%
! CTTCATTTTCATTCGACAGT+TGG - chr1_1:74951014-74951033 Msa0043660:intron 35.0%
! ACAGTTGGCCATGATTTTAA+GGG - chr1_1:74951029-74951048 Msa0043660:intron 35.0%
AAGTGCATCCCTTAAAATCA+TGG + chr1_1:74951040-74951059 None:intergenic 35.0%
GTCAGGATAGATCAATTGTT+AGG + chr1_1:74951184-74951203 None:intergenic 35.0%
CAAATCTATCAAGGAATGTC+TGG + chr1_1:74951259-74951278 None:intergenic 35.0%
! CTTTTCGCAAGGTTTATGAA+TGG - chr1_1:74951399-74951418 Msa0043660:CDS 35.0%
TCATTAACTCTCTTGAGCTT+TGG - chr1_1:74951426-74951445 Msa0043660:CDS 35.0%
CAGATTGTGAACTATAAGCA+CGG + chr1_1:74951463-74951482 None:intergenic 35.0%
CCAAAAATTATTTGGGTCAG+TGG + chr1_1:74951506-74951525 None:intergenic 35.0%
! CCACTGACCCAAATAATTTT+TGG - chr1_1:74951503-74951522 Msa0043660:CDS 35.0%
GGGCTACTCCAAAAATTATT+TGG + chr1_1:74951514-74951533 None:intergenic 35.0%
TGATTTACGCAGCATATTGA+AGG - chr1_1:74951703-74951722 Msa0043660:intron 35.0%
!! TATTGAAGGTACTCGTTACT+TGG - chr1_1:74951717-74951736 Msa0043660:intron 35.0%
GCAAATTGACCAAAGTTGAA+AGG - chr1_1:74951957-74951976 Msa0043660:intron 35.0%
TCTTCGAAACCTTTCAACTT+TGG + chr1_1:74951969-74951988 None:intergenic 35.0%
AAAGGTTTCGAAGAGAAATG+AGG - chr1_1:74951975-74951994 Msa0043660:intron 35.0%
! AATTTTCCACACTCAGATTG+AGG - chr1_1:74952101-74952120 Msa0043660:intron 35.0%
ATTGTTTCCTTGTTGGATGT+TGG - chr1_1:74952252-74952271 Msa0043660:intron 35.0%
AGCTTGGAAGAATTGAAACA+TGG + chr1_1:74952321-74952340 None:intergenic 35.0%
TTTCAATTCTTCCAAGCTCT+CGG - chr1_1:74952323-74952342 Msa0043660:intron 35.0%
!! ATACTTTGATAGTGCACTAG+AGG + chr1_1:74952696-74952715 None:intergenic 35.0%
!!! TTTTTTGTTTTGCTCTCTGG+CGG + chr1_1:74952730-74952749 None:intergenic 35.0%
!!! CGTTTTTTTGTTTTGCTCTC+TGG + chr1_1:74952733-74952752 None:intergenic 35.0%
TAAATTCACCTCCATTCTCA+TGG - chr1_1:74952782-74952801 Msa0043660:CDS 35.0%
TTCTTCATCACCAAAAACAG+AGG + chr1_1:74952895-74952914 None:intergenic 35.0%
!!! TGCTTTTTCCTCTTTCCTTT+TGG + chr1_1:74953182-74953201 None:intergenic 35.0%
!!! TTTGTCTTGCGGTTTTGTTT+TGG + chr1_1:74953338-74953357 None:intergenic 35.0%
AGGAATAAATCTCACACCTA+AGG - chr1_1:74953380-74953399 Msa0043660:intron 35.0%
GGAATAAATCTCACACCTAA+GGG - chr1_1:74953381-74953400 Msa0043660:intron 35.0%
!! AGACATATCACTTTTCCCTT+AGG + chr1_1:74953399-74953418 None:intergenic 35.0%
ATATCTAAATGTAATGGCGG+CGG - chr1_1:74953559-74953578 Msa0043660:intron 35.0%
!! TTTTTGGCATATCGCTACAA+CGG + chr1_1:74953638-74953657 None:intergenic 35.0%
! TGCCCCTGATATTTGTATTT+TGG - chr1_1:74953774-74953793 Msa0043660:five_prime_UTR 35.0%
TGTAGCAGTAGATTAACGTG+CGG - chr1_1:74947720-74947739 Msa0043660:three_prime_UTR 40.0%
CCATCGTGTTGCAATGAAAA+CGG + chr1_1:74947835-74947854 None:intergenic 40.0%
TTTCATTGCAACACGATGGT+TGG - chr1_1:74947836-74947855 Msa0043660:three_prime_UTR 40.0%
ACAAGCAAAGTTGCATACAC+AGG + chr1_1:74948156-74948175 None:intergenic 40.0%
AGTAAGCTGCTTATCCAAAC+AGG - chr1_1:74948405-74948424 Msa0043660:intron 40.0%
GTAAGCTGCTTATCCAAACA+GGG - chr1_1:74948406-74948425 Msa0043660:intron 40.0%
TTAGCTATTAAGGCCCTGTT+TGG + chr1_1:74948422-74948441 None:intergenic 40.0%
ACGTAGACGAAGACAAGTAA+AGG - chr1_1:74948541-74948560 Msa0043660:CDS 40.0%
GTGAAATTTGAACTAGGTGG+TGG - chr1_1:74948615-74948634 Msa0043660:CDS 40.0%
GTACTTGAAAGAGAATGACC+CGG - chr1_1:74948733-74948752 Msa0043660:intron 40.0%
TCACTGAACTTAAGCAGATC+CGG + chr1_1:74948755-74948774 None:intergenic 40.0%
CTTAGCTACTAAGCTTGCAT+TGG - chr1_1:74948958-74948977 Msa0043660:intron 40.0%
TCATTGCAGTGGCTAAATGA+TGG - chr1_1:74949104-74949123 Msa0043660:intron 40.0%
CATTGCAGTGGCTAAATGAT+GGG - chr1_1:74949105-74949124 Msa0043660:intron 40.0%
! TCCCTTTAGAGACATGTTTG+TGG - chr1_1:74949141-74949160 Msa0043660:intron 40.0%
GCCACAAACATGTCTCTAAA+GGG + chr1_1:74949145-74949164 None:intergenic 40.0%
TGCCACAAACATGTCTCTAA+AGG + chr1_1:74949146-74949165 None:intergenic 40.0%
TGCTGGTAAATTGGTTGAAG+AGG - chr1_1:74949559-74949578 Msa0043660:CDS 40.0%
AATTGGTTGAAGAGGAATGC+CGG - chr1_1:74949567-74949586 Msa0043660:CDS 40.0%
AGGAGCAATCTTGACAATAC+CGG + chr1_1:74949589-74949608 None:intergenic 40.0%
! CTGTTTCGCTTCTTTTATCC+AGG - chr1_1:74949789-74949808 Msa0043660:intron 40.0%
CCACAAATCAACCATAGAAG+TGG + chr1_1:74949920-74949939 None:intergenic 40.0%
!! CCACTTCTATGGTTGATTTG+TGG - chr1_1:74949917-74949936 Msa0043660:CDS 40.0%
TCTCATCATCATCACCATAG+TGG + chr1_1:74950014-74950033 None:intergenic 40.0%
CAAGGTAGGACTTCACAATA+TGG + chr1_1:74950212-74950231 None:intergenic 40.0%
CATATTGTGAAGTCCTACCT+TGG - chr1_1:74950210-74950229 Msa0043660:intron 40.0%
!! AAATGTGGAGAGCATTTCCA+AGG + chr1_1:74950230-74950249 None:intergenic 40.0%
AATTACTGCACAAGACCGAA+TGG + chr1_1:74950481-74950500 None:intergenic 40.0%
ATCAGGTGTCTCTTCATTTC+TGG - chr1_1:74950767-74950786 Msa0043660:intron 40.0%
TCAGGTGTCTCTTCATTTCT+GGG - chr1_1:74950768-74950787 Msa0043660:intron 40.0%
TAGACACGAAACAACAGGAA+GGG + chr1_1:74950809-74950828 None:intergenic 40.0%
ATAGACACGAAACAACAGGA+AGG + chr1_1:74950810-74950829 None:intergenic 40.0%
AGAGAGTTGTGCATCTGTAT+TGG - chr1_1:74950835-74950854 Msa0043660:intron 40.0%
TTGTGCATCTGTATTGGATC+TGG - chr1_1:74950841-74950860 Msa0043660:intron 40.0%
AACTGCGTCATTGAACTTCT+CGG - chr1_1:74950961-74950980 Msa0043660:intron 40.0%
! GACAGTTGGCCATGATTTTA+AGG - chr1_1:74951028-74951047 Msa0043660:intron 40.0%
TCTAGCAGCAAAATGTTACG+AGG + chr1_1:74951133-74951152 None:intergenic 40.0%
! TCGTAACATTTTGCTGCTAG+AGG - chr1_1:74951132-74951151 Msa0043660:intron 40.0%
! CGTAACATTTTGCTGCTAGA+GGG - chr1_1:74951133-74951152 Msa0043660:intron 40.0%
!! CAATTGTTAGGATTGGTTCC+AGG + chr1_1:74951172-74951191 None:intergenic 40.0%
AAGTGTCAAGCTCATAAGTC+AGG + chr1_1:74951201-74951220 None:intergenic 40.0%
!! TCTTTAGGAAGCTTTTCGCA+AGG - chr1_1:74951388-74951407 Msa0043660:CDS 40.0%
! ACCAGTATCTATGCTCCTTT+TGG - chr1_1:74951622-74951641 Msa0043660:CDS 40.0%
! TCCAAAAGGAGCATAGATAC+TGG + chr1_1:74951626-74951645 None:intergenic 40.0%
! TATGCTCCTTTTGGATATGC+TGG - chr1_1:74951631-74951650 Msa0043660:CDS 40.0%
TCATCTCCAGCATATCCAAA+AGG + chr1_1:74951640-74951659 None:intergenic 40.0%
!!! AGAGGCTTGTGTTTTTTCTG+TGG - chr1_1:74951841-74951860 Msa0043660:intron 40.0%
TTCTGTGGTTGAAGAACTTG+CGG - chr1_1:74951856-74951875 Msa0043660:intron 40.0%
! TTGGCATGCATCAGATTTTG+TGG - chr1_1:74952060-74952079 Msa0043660:intron 40.0%
! TGCGCTTTTCATTCACAAAC+TGG + chr1_1:74952134-74952153 None:intergenic 40.0%
CTTTCTACCTAATGATCCTG+CGG - chr1_1:74952164-74952183 Msa0043660:intron 40.0%
GAAGAATTGAAACATGGAGC+AGG + chr1_1:74952315-74952334 None:intergenic 40.0%
TCTGGCTAAACACTATCGTA+TGG - chr1_1:74952465-74952484 Msa0043660:intron 40.0%
GCTAAACACTATCGTATGGT+GGG - chr1_1:74952469-74952488 Msa0043660:intron 40.0%
CATTGAGGCGTGAAATAAGT+GGG + chr1_1:74952589-74952608 None:intergenic 40.0%
ACATTGAGGCGTGAAATAAG+TGG + chr1_1:74952590-74952609 None:intergenic 40.0%
ACGACTCATTAAAGGAATCC+AGG - chr1_1:74952750-74952769 Msa0043660:CDS 40.0%
ACAGTAATCCATGAGAATGG+AGG + chr1_1:74952793-74952812 None:intergenic 40.0%
GACACAGTAATCCATGAGAA+TGG + chr1_1:74952796-74952815 None:intergenic 40.0%
TTCTTCTCCAACAAGAACAC+TGG + chr1_1:74952871-74952890 None:intergenic 40.0%
! GGAGAAGAATCCTCTGTTTT+TGG - chr1_1:74952882-74952901 Msa0043660:intron 40.0%
TGAAGAATCAGCAAGTGATG+AGG - chr1_1:74952908-74952927 Msa0043660:intron 40.0%
GGAGGATACTAAAGAGAATG+AGG - chr1_1:74952929-74952948 Msa0043660:intron 40.0%
! GAGCAATACTTGTCATTTCC+AGG + chr1_1:74953005-74953024 None:intergenic 40.0%
!!! CTCTTTCCTTTTGGTTCAGT+AGG + chr1_1:74953173-74953192 None:intergenic 40.0%
CTACTGAACCAAAAGGAAAG+AGG - chr1_1:74953171-74953190 Msa0043660:intron 40.0%
!! TGCCATTGATGATGATGTTG+TGG - chr1_1:74953217-74953236 Msa0043660:intron 40.0%
CTCCACAACATCATCATCAA+TGG + chr1_1:74953222-74953241 None:intergenic 40.0%
!! CATTGATGATGATGTTGTGG+AGG - chr1_1:74953220-74953239 Msa0043660:intron 40.0%
! ATCAACATCGGCATTTTTCC+CGG + chr1_1:74953303-74953322 None:intergenic 40.0%
! TTTTGGCATATCGCTACAAC+GGG + chr1_1:74953637-74953656 None:intergenic 40.0%
AATCTCTTTAGCGTGTAAGC+TGG - chr1_1:74953673-74953692 Msa0043660:exon 40.0%
TACAAATATCAGGGGCAACT+TGG + chr1_1:74953771-74953790 None:intergenic 40.0%
TGGGGATGTTGAAGTTGAAG+AGG + chr1_1:74947768-74947787 None:intergenic 45.0%
! CCGTTTTCATTGCAACACGA+TGG - chr1_1:74947832-74947851 Msa0043660:three_prime_UTR 45.0%
CACGATGGTTGGAAGAAAAG+CGG - chr1_1:74947847-74947866 Msa0043660:three_prime_UTR 45.0%
CTTTGCTTCAATCACAACCG+TGG + chr1_1:74948046-74948065 None:intergenic 45.0%
! TGAACTAGGTGGTGGTTGAT+AGG - chr1_1:74948623-74948642 Msa0043660:CDS 45.0%
! GAACTAGGTGGTGGTTGATA+GGG - chr1_1:74948624-74948643 Msa0043660:CDS 45.0%
TCTTCGTCCTGCAATGGAAA+AGG + chr1_1:74948704-74948723 None:intergenic 45.0%
CACTGAACTTAAGCAGATCC+GGG + chr1_1:74948754-74948773 None:intergenic 45.0%
TCCGAAAAAGGTCATTGCAG+TGG - chr1_1:74949093-74949112 Msa0043660:intron 45.0%
! GCCACTGCAATGACCTTTTT+CGG + chr1_1:74949097-74949116 None:intergenic 45.0%
TGTCATCATCCACATCTTCC+TGG + chr1_1:74949810-74949829 None:intergenic 45.0%
GGAAGATGTGGATGATGACA+TGG - chr1_1:74949810-74949829 Msa0043660:CDS 45.0%
GTGGATGATGACATGGAAGA+TGG - chr1_1:74949817-74949836 Msa0043660:CDS 45.0%
AGAACCACAGGTAGATGAGA+AGG - chr1_1:74949840-74949859 Msa0043660:CDS 45.0%
ATAGCCTTCTCATCTACCTG+TGG + chr1_1:74949847-74949866 None:intergenic 45.0%
TGAGAAGGCTATTGAGCATG+AGG - chr1_1:74949855-74949874 Msa0043660:CDS 45.0%
TGAGCATGAGGTTCAAGCAA+AGG - chr1_1:74949867-74949886 Msa0043660:CDS 45.0%
TGTCCTAAAAGCCCTCATCA+GGG + chr1_1:74949986-74950005 None:intergenic 45.0%
! TTTAGGACAGCATGCCACTA+TGG - chr1_1:74949997-74950016 Msa0043660:CDS 45.0%
TTGTTGAAGCTTCCTGCTTC+TGG - chr1_1:74950129-74950148 Msa0043660:intron 45.0%
! TCTTTTCTTCCACCAGAAGC+AGG + chr1_1:74950144-74950163 None:intergenic 45.0%
! CTTCCAATGCTTGGTGATTG+TGG - chr1_1:74950453-74950472 Msa0043660:intron 45.0%
! TTGGTGATTGTGGCACCATT+CGG - chr1_1:74950463-74950482 Msa0043660:CDS 45.0%
CAGGTGTCTCTTCATTTCTG+GGG - chr1_1:74950769-74950788 Msa0043660:intron 45.0%
!! TCTCTTCATTTCTGGGGTAC+TGG - chr1_1:74950775-74950794 Msa0043660:intron 45.0%
! AAGGCGTGTTGATATGCAGT+CGG + chr1_1:74950997-74951016 None:intergenic 45.0%
GAGGGATACAATCAATCACC+TGG - chr1_1:74951151-74951170 Msa0043660:intron 45.0%
CGGATACATCTCAACCTAAG+GGG + chr1_1:74951563-74951582 None:intergenic 45.0%
CCGGATACATCTCAACCTAA+GGG + chr1_1:74951564-74951583 None:intergenic 45.0%
!! CCCTTAGGTTGAGATGTATC+CGG - chr1_1:74951561-74951580 Msa0043660:CDS 45.0%
TCCGGATACATCTCAACCTA+AGG + chr1_1:74951565-74951584 None:intergenic 45.0%
! CAGCAATCTGGTTCAACATC+CGG + chr1_1:74951583-74951602 None:intergenic 45.0%
AATGGGTAGAAGCAGCAATC+TGG + chr1_1:74951595-74951614 None:intergenic 45.0%
GCAAGCCAACTCTTAAGACA+CGG - chr1_1:74951810-74951829 Msa0043660:intron 45.0%
CAAGCCAACTCTTAAGACAC+GGG - chr1_1:74951811-74951830 Msa0043660:intron 45.0%
AATGCCCGTGTCTTAAGAGT+TGG + chr1_1:74951818-74951837 None:intergenic 45.0%
TAAGACACGGGCATTTCAAG+AGG - chr1_1:74951823-74951842 Msa0043660:intron 45.0%
CACTGTGGAGTTACTCTGTT+GGG - chr1_1:74951888-74951907 Msa0043660:intron 45.0%
GAGTTACTCTGTTGGGTTCA+TGG - chr1_1:74951895-74951914 Msa0043660:intron 45.0%
AAGTTGCGCAACCTCACAAT+TGG + chr1_1:74951935-74951954 None:intergenic 45.0%
! CATTAGCCTCAATCTGAGTG+TGG + chr1_1:74952110-74952129 None:intergenic 45.0%
CGCAGGATCATTAGGTAGAA+AGG + chr1_1:74952166-74952185 None:intergenic 45.0%
TCAAGAAAAGATGATGCCGC+AGG + chr1_1:74952183-74952202 None:intergenic 45.0%
! TGCGGCATCATCTTTTCTTG+AGG - chr1_1:74952182-74952201 Msa0043660:intron 45.0%
AGGTCAACCAACATCCAACA+AGG + chr1_1:74952262-74952281 None:intergenic 45.0%
AGCATCGTCAGTCACTTCAT+TGG + chr1_1:74952417-74952436 None:intergenic 45.0%
GGCTAAACACTATCGTATGG+TGG - chr1_1:74952468-74952487 Msa0043660:intron 45.0%
AGAATCAGCAAGTGATGAGG+AGG - chr1_1:74952911-74952930 Msa0043660:intron 45.0%
AGTTCCATCCACGTTCTCTT+TGG + chr1_1:74952958-74952977 None:intergenic 45.0%
! TTTAGCTCATCCTGGTTACC+TGG - chr1_1:74952984-74953003 Msa0043660:intron 45.0%
! CTTGTCATTTCCAGGTAACC+AGG + chr1_1:74952997-74953016 None:intergenic 45.0%
GTGTGTTTGTGTATGCAGCT+GGG + chr1_1:74953057-74953076 None:intergenic 45.0%
CTGAGGAATGCTTTGCTTTC+AGG - chr1_1:74953135-74953154 Msa0043660:intron 45.0%
CAACAGCCTACTGAACCAAA+AGG - chr1_1:74953164-74953183 Msa0043660:intron 45.0%
! TGATGATGTTGTGGAGGACT+TGG - chr1_1:74953226-74953245 Msa0043660:intron 45.0%
TCTTTAGCGTGTAAGCTGGT+AGG - chr1_1:74953677-74953696 Msa0043660:exon 45.0%
AGCAGTAGATTAACGTGCGG+TGG - chr1_1:74947723-74947742 Msa0043660:three_prime_UTR 50.0%
GCAGTAGATTAACGTGCGGT+GGG - chr1_1:74947724-74947743 Msa0043660:three_prime_UTR 50.0%
GATGGTTGGAAGAAAAGCGG+CGG - chr1_1:74947850-74947869 Msa0043660:three_prime_UTR 50.0%
AAAAGCGGCGGTGAAGGAAA+TGG - chr1_1:74947862-74947881 Msa0043660:three_prime_UTR 50.0%
CTTCGTCTACGTCTACCCTA+TGG + chr1_1:74948533-74948552 None:intergenic 50.0%
!! GTGGCTAAATGATGGGTGAC+TGG - chr1_1:74949112-74949131 Msa0043660:intron 50.0%
!! CTAAATGATGGGTGACTGGC+TGG - chr1_1:74949116-74949135 Msa0043660:intron 50.0%
GACTGTGCTTGTGTGTTTGC+TGG - chr1_1:74949542-74949561 Msa0043660:CDS 50.0%
CATGGAAGATGGAGAACCAC+AGG - chr1_1:74949828-74949847 Msa0043660:CDS 50.0%
! GTTCCCTGATGAGGGCTTTT+AGG - chr1_1:74949980-74949999 Msa0043660:CDS 50.0%
CTGTCCTAAAAGCCCTCATC+AGG + chr1_1:74949987-74950006 None:intergenic 50.0%
TTGAAGCTTCCTGCTTCTGG+TGG - chr1_1:74950132-74950151 Msa0043660:intron 50.0%
!! GTGGAGAGCATTTCCAAGGT+AGG + chr1_1:74950226-74950245 None:intergenic 50.0%
!! CTGCTTTTCCTTCGCTCCTA+AGG - chr1_1:74950322-74950341 Msa0043660:intron 50.0%
GTGCCACAATCACCAAGCAT+TGG + chr1_1:74950459-74950478 None:intergenic 50.0%
!! CTTCATTTCTGGGGTACTGG+TGG - chr1_1:74950778-74950797 Msa0043660:intron 50.0%
CGTCATTGAACTTCTCGGAG+TGG - chr1_1:74950966-74950985 Msa0043660:intron 50.0%
GAGTTGAATAGACCCCCTAC+AGG - chr1_1:74951662-74951681 Msa0043660:CDS 50.0%
TTGAATAGACCCCCTACAGG+AGG - chr1_1:74951665-74951684 Msa0043660:CDS 50.0%
TTTGCCAATGCCTCCTGTAG+GGG + chr1_1:74951678-74951697 None:intergenic 50.0%
CTTTGCCAATGCCTCCTGTA+GGG + chr1_1:74951679-74951698 None:intergenic 50.0%
CAGAGTAACTCCACAGTGCT+AGG + chr1_1:74951886-74951905 None:intergenic 50.0%
GCACTGTGGAGTTACTCTGT+TGG - chr1_1:74951887-74951906 Msa0043660:intron 50.0%
AATGAGGCAGCTTATTCGCG+AGG - chr1_1:74951991-74952010 Msa0043660:intron 50.0%
GATGATGCCGCAGGATCATT+AGG + chr1_1:74952174-74952193 None:intergenic 50.0%
TGAGGATGCCAAAGAGAACG+TGG - chr1_1:74952947-74952966 Msa0043660:intron 50.0%
GATGCCAAAGAGAACGTGGA+TGG - chr1_1:74952951-74952970 Msa0043660:intron 50.0%
! CTGCTGCATTTAGCTCATCC+TGG - chr1_1:74952976-74952995 Msa0043660:intron 50.0%
CGTGTGTTTGTGTATGCAGC+TGG + chr1_1:74953058-74953077 None:intergenic 50.0%
ATATCAGGGGCAACTTGGTC+TGG + chr1_1:74953766-74953785 None:intergenic 50.0%
TGGAAGAAAAGCGGCGGTGA+AGG - chr1_1:74947856-74947875 Msa0043660:three_prime_UTR 55.0%
ATGCGGTTCGTTCCCTGATG+AGG - chr1_1:74949971-74949990 Msa0043660:CDS 55.0%
TGCGGTTCGTTCCCTGATGA+GGG - chr1_1:74949972-74949991 Msa0043660:CDS 55.0%
!! CATTTCTGGGGTACTGGTGG+AGG - chr1_1:74950781-74950800 Msa0043660:intron 55.0%
! AGTAGCCCGTCTAGTTCCCA+CGG - chr1_1:74951526-74951545 Msa0043660:CDS 55.0%
ACCTAGCCGTGGGAACTAGA+CGG + chr1_1:74951535-74951554 None:intergenic 55.0%
!! AGGGGAAAGTACCTAGCCGT+GGG + chr1_1:74951545-74951564 None:intergenic 55.0%
!! AAGGGGAAAGTACCTAGCCG+TGG + chr1_1:74951546-74951565 None:intergenic 55.0%
CGGCTAGGTACTTTCCCCTT+AGG - chr1_1:74951546-74951565 Msa0043660:CDS 55.0%
TTGCCAATGCCTCCTGTAGG+GGG + chr1_1:74951677-74951696 None:intergenic 55.0%
GCTTTGCCAATGCCTCCTGT+AGG + chr1_1:74951680-74951699 None:intergenic 55.0%
TTGCGGAACACCTAGCACTG+TGG - chr1_1:74951873-74951892 Msa0043660:intron 55.0%
TATGCAGGTAGCCGAGAGCT+TGG + chr1_1:74952337-74952356 None:intergenic 55.0%
! CGGCATTTTTCCCGGCAGAA+GGG + chr1_1:74953295-74953314 None:intergenic 55.0%
! TCGGCATTTTTCCCGGCAGA+AGG + chr1_1:74953296-74953315 None:intergenic 55.0%
CCTAGCCGTGGGAACTAGAC+GGG + chr1_1:74951534-74951553 None:intergenic 60.0%
! AGACCCCCTACAGGAGGCAT+TGG - chr1_1:74951671-74951690 Msa0043660:CDS 60.0%
! GCAGAAGGGCTGTCGCTTGA+AGG + chr1_1:74953281-74953300 None:intergenic 60.0%
TCAAGCGACAGCCCTTCTGC+CGG - chr1_1:74953281-74953300 Msa0043660:intron 60.0%
TCAGGGGCAACTTGGTCTGG+AGG + chr1_1:74953763-74953782 None:intergenic 60.0%
! CCCGTCTAGTTCCCACGGCT+AGG - chr1_1:74951531-74951550 Msa0043660:CDS 65.0%
CAAGCGACAGCCCTTCTGCC+GGG - chr1_1:74953282-74953301 Msa0043660:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 74947690 74953838 74947690 ID=Msa0043660;Name=Msa0043660
chr1_1 mRNA 74947690 74953838 74947690 ID=Msa0043660-mRNA-1;Parent=Msa0043660;Name=Msa0043660-mRNA-1;_AED=0.05;_eAED=0.05;_QI=161|1|1|1|1|1|11|438|730
chr1_1 exon 74947690 74948371 74947690 ID=Msa0043660-mRNA-1:exon:25302;Parent=Msa0043660-mRNA-1
chr1_1 exon 74948513 74948656 74948513 ID=Msa0043660-mRNA-1:exon:25301;Parent=Msa0043660-mRNA-1
chr1_1 exon 74948757 74948851 74948757 ID=Msa0043660-mRNA-1:exon:25300;Parent=Msa0043660-mRNA-1
chr1_1 exon 74949325 74949411 74949325 ID=Msa0043660-mRNA-1:exon:25299;Parent=Msa0043660-mRNA-1
chr1_1 exon 74949516 74949722 74949516 ID=Msa0043660-mRNA-1:exon:25298;Parent=Msa0043660-mRNA-1
chr1_1 exon 74949804 74950133 74949804 ID=Msa0043660-mRNA-1:exon:25297;Parent=Msa0043660-mRNA-1
chr1_1 exon 74950454 74950756 74950454 ID=Msa0043660-mRNA-1:exon:25296;Parent=Msa0043660-mRNA-1
chr1_1 exon 74951172 74951717 74951172 ID=Msa0043660-mRNA-1:exon:25295;Parent=Msa0043660-mRNA-1
chr1_1 exon 74952741 74952812 74952741 ID=Msa0043660-mRNA-1:exon:25294;Parent=Msa0043660-mRNA-1
chr1_1 exon 74953427 74953536 74953427 ID=Msa0043660-mRNA-1:exon:25293;Parent=Msa0043660-mRNA-1
chr1_1 exon 74953623 74953838 74953623 ID=Msa0043660-mRNA-1:exon:25292;Parent=Msa0043660-mRNA-1
chr1_1 five_prime_UTR 74953678 74953838 74953678 ID=Msa0043660-mRNA-1:five_prime_utr;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74953623 74953677 74953623 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74953427 74953536 74953427 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74952741 74952812 74952741 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74951172 74951717 74951172 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74950454 74950756 74950454 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74949804 74950133 74949804 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74949516 74949722 74949516 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74949325 74949411 74949325 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74948757 74948851 74948757 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74948513 74948656 74948513 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 CDS 74948128 74948371 74948128 ID=Msa0043660-mRNA-1:cds;Parent=Msa0043660-mRNA-1
chr1_1 three_prime_UTR 74947690 74948127 74947690 ID=Msa0043660-mRNA-1:three_prime_utr;Parent=Msa0043660-mRNA-1
Gene Sequence

>Msa0043660

ATGGTTGGAAGAAAAGCGGCGGTGAAGGAAATGGTTTCAACACAAATTGATAAAGAGATTAATGTGGATGGAGAAAATAATGTAAAAAGAAAGAGCAAGAAAAATTCCACGGTTGTGATTGAAGCAAAGCAACATAAGGAGCAAATAGAAAATCTTCAGCACAAGGACGAAGATTTTTATGAGTACTTGAAAGAGAATGACCCGGATCTGCTTAAGTTCAGTGATGACGATATTGATGAAGATGTGGATGATGACATGGAAGATGGAGAACCACAGGTAGATGAGAAGGCTATTGAGCATGAGGTTCAAGCAAAGGATAAAAAACGTTCTAATAAAGTTATAACCACTTCTATGGTTGATTTGTGGTGCAAATCAATTAAAGAAAATGGGAGCTTAAATGCGGTTCGTTCCCTGATGAGGGCTTTTAGGACAGCATGCCACTATGGTGATGATGATGAGAATGATTCTACAGCAAAGCTTAGTGTAATGTCTAGCGTTGTGTTCAACAAAATAATGTTGACTGTACTTAATGAAATGGATGGAATACTAAGAAAATTGTTGAAGCTTCCTGCTTCTGGTGGAAGAAAAGAGATCATAATGGATTTGATGACTACAAAACAATGGAGGACTTATGGCCATATTGTGAAGTCCTACCTTGGAAATGCTCTCCACATTTTGAATCAAATGACTGACTCGCAAATGATATCATTTACTTTACATCGGCTAAAATATTCTTCATTGTTGTTGGCTGCTTTTCCTTCGCTCCTAAGGAAATATATCAAGGTGTCTCTTCATTTCTGGGGTACTGGTGGAGGTGCCCTTCCTGTTGTTTCGTGTCTATTCATGAGAGAGTTGTGCATCTGTATTGGATCTGGCTGCATAGATGATTGCTTTAAAGGAATATATAAAGCCTATGTTTTGAATTGCCATTTCGTAAATGCTGTGAAACTTAAACATATTCGTTTTCTTAGCAACTGCGTCATTGAACTTCTCGGAGTGGATCTTCCGACTGCATATCAACACGCCTTCATTTTCATTCGACAGTTGGCCATGATTTTAAGGGATGCACTTAATACAAAAACTAAGGAAGCTTTTCGCAAGGTTTATGAATGGAAGTTCATTAACTCTCTTGAGCTTTGGACTGATGCTATCCGTGCTTATAGTTCACAATCTGACTTTAAGCAACTTGCATATCCACTGACCCAAATAATTTTTGGAGTAGCCCGTCTAGTTCCCACGGCTAGGTACTTTCCCCTTAGGTTGAGATGTATCCGGATGTTGAACCAGATTGCTGCTTCTACCCATTCTTTTGTACCAGTATCTATGCTCCTTTTGGATATGCTGGAGATGAAAGAGTTGAATAGACCCCCTACAGGAGGCATTGGCAAAGCTGTTGATTTACGCAGCATATTGAAGGTTAGCAAGCCAACTCTTAAGACACGGGCATTTCAAGAGGCTTGTGTTTTTTCTGTGGTTGAAGAACTTGCGGAACACCTAGCACTGTGGAGTTACTCTGTTGGGTTCATGGAGTTGTCTTTTATTCCAATTGTGAGGTTGCGCAACTTTTGCAAATTGACCAAAGTTGAAAGGTTTCGAAGAGAAATGAGGCAGCTTATTCGCGAGATTGAGGCTAATGTCCAGTTTGTGAATGAAAAGCGCATGTCGATTTCCTTTCTACCTAATGATCCTGCGGCATCATCTTTTCTTGAGGATGAGAAGAAGTCAGCCTCTAGTGCACTATCAAAGTATGTTATAACACTCCGCCAGAGAGCAAAACAAAAAAACGACTCATTAAAGGAATCCAGTGTTCTTGTTGGAGAAGAATCCTCTGTTTTTGGTGATGAAGAATCAGCAAGTGATGAGGAGGATACTAAAGAGAATGAGGATGCCAAAGAGAACGTGGATGGAACTGCTGCATTTAGCTCATCCTGGTTACCTGGAAATGACAAGATAAAACAACAGCCTACTGAACCAAAAGGAAAGAGGAAAAAGCATAAAAAAGAAAGAACTGCCATTGATGATGATGTTGTGGAGGACTTGGTACTTAGTTCTGATGAAGATGAAGATTTGCCTTCAAGCGACAGCCCTTCTGCCGGGAAAAATGCCGATGTTGATCATCATTCATCTCCAAAACAAAACCGCAAGACAAAGCATAAAACAAAAAGGTTGAAAAGGAATAAATCTCACACCTAA
Protein sequence

>Msa0043660

MVGRKAAVKEMVSTQIDKEINVDGENNVKRKSKKNSTVVIEAKQHKEQIENLQHKDEDFYEYLKENDPDLLKFSDDDIDEDVDDDMEDGEPQVDEKAIEHEVQAKDKKRSNKVITTSMVDLWCKSIKENGSLNAVRSLMRAFRTACHYGDDDENDSTAKLSVMSSVVFNKIMLTVLNEMDGILRKLLKLPASGGRKEIIMDLMTTKQWRTYGHIVKSYLGNALHILNQMTDSQMISFTLHRLKYSSLLLAAFPSLLRKYIKVSLHFWGTGGGALPVVSCLFMRELCICIGSGCIDDCFKGIYKAYVLNCHFVNAVKLKHIRFLSNCVIELLGVDLPTAYQHAFIFIRQLAMILRDALNTKTKEAFRKVYEWKFINSLELWTDAIRAYSSQSDFKQLAYPLTQIIFGVARLVPTARYFPLRLRCIRMLNQIAASTHSFVPVSMLLLDMLEMKELNRPPTGGIGKAVDLRSILKVSKPTLKTRAFQEACVFSVVEELAEHLALWSYSVGFMELSFIPIVRLRNFCKLTKVERFRREMRQLIREIEANVQFVNEKRMSISFLPNDPAASSFLEDEKKSASSALSKYVITLRQRAKQKNDSLKESSVLVGEESSVFGDEESASDEEDTKENEDAKENVDGTAAFSSSWLPGNDKIKQQPTEPKGKRKKHKKERTAIDDDVVEDLVLSSDEDEDLPSSDSPSAGKNADVDHHSSPKQNRKTKHKTKRLKRNKSHT*