Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430620 | XP_024634982.1 | 98.947 | 95 | 1 | 0 | 1 | 95 | 1 | 95 | 8.53e-58 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430620 | G8A2A7 | 98.947 | 95 | 1 | 0 | 1 | 95 | 1 | 95 | 4.07e-58 | 182 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa0430620 | -0.810105 | 1.359691e-50 | -8.615850e-47 |
| Msa0015300 | Msa0430620 | 0.810550 | 1.090208e-50 | -8.615850e-47 |
| Msa0020630 | Msa0430620 | 0.806300 | 8.797165e-50 | -8.615850e-47 |
| Msa0027540 | Msa0430620 | 0.843655 | 1.226201e-58 | -8.615850e-47 |
| Msa0030380 | Msa0430620 | 0.825850 | 3.743618e-54 | -8.615850e-47 |
| Msa0030730 | Msa0430620 | 0.805893 | 1.071372e-49 | -8.615850e-47 |
| Msa0036670 | Msa0430620 | 0.806005 | 1.014987e-49 | -8.615850e-47 |
| Msa0038350 | Msa0430620 | -0.810238 | 1.273310e-50 | -8.615850e-47 |
| Msa0044240 | Msa0430620 | -0.816662 | 4.926337e-52 | -8.615850e-47 |
| Msa0044710 | Msa0430620 | 0.846590 | 1.973496e-59 | -8.615850e-47 |
| Msa0046660 | Msa0430620 | -0.883068 | 6.131833e-71 | -8.615850e-47 |
| Msa0046750 | Msa0430620 | 0.813657 | 2.290800e-51 | -8.615850e-47 |
| Msa0049650 | Msa0430620 | -0.849710 | 2.714725e-60 | -8.615850e-47 |
| Msa0050430 | Msa0430620 | 0.821746 | 3.427038e-53 | -8.615850e-47 |
| Msa0050720 | Msa0430620 | 0.810995 | 8.736380e-51 | -8.615850e-47 |
| Msa0054730 | Msa0430620 | -0.801715 | 7.900648e-49 | -8.615850e-47 |
| Msa0055410 | Msa0430620 | 0.820879 | 5.432473e-53 | -8.615850e-47 |
| Msa0068060 | Msa0430620 | 0.819496 | 1.126339e-52 | -8.615850e-47 |
| Msa0075310 | Msa0430620 | 0.847878 | 8.752049e-60 | -8.615850e-47 |
| Msa0084650 | Msa0430620 | 0.811574 | 6.540485e-51 | -8.615850e-47 |
| Msa0084680 | Msa0430620 | 0.808145 | 3.575615e-50 | -8.615850e-47 |
| Msa0090770 | Msa0430620 | -0.819035 | 1.434730e-52 | -8.615850e-47 |
| Msa0091770 | Msa0430620 | 0.832470 | 9.283257e-56 | -8.615850e-47 |
| Msa0100640 | Msa0430620 | 0.819867 | 9.268749e-53 | -8.615850e-47 |
| Msa0119850 | Msa0430620 | 0.811277 | 7.588144e-51 | -8.615850e-47 |
| Msa0129790 | Msa0430620 | -0.805516 | 1.285591e-49 | -8.615850e-47 |
| Msa0143140 | Msa0430620 | -0.807531 | 4.829974e-50 | -8.615850e-47 |
| Msa0143430 | Msa0430620 | 0.814915 | 1.207829e-51 | -8.615850e-47 |
| Msa0149500 | Msa0430620 | 0.803608 | 3.214265e-49 | -8.615850e-47 |
| Msa0159750 | Msa0430620 | 0.803268 | 3.779514e-49 | -8.615850e-47 |
| Msa0162770 | Msa0430620 | -0.821364 | 4.200246e-53 | -8.615850e-47 |
| Msa0168100 | Msa0430620 | 0.837914 | 3.923044e-57 | -8.615850e-47 |
| Msa0173740 | Msa0430620 | 0.829638 | 4.603385e-55 | -8.615850e-47 |
| Msa0173820 | Msa0430620 | 0.836677 | 8.134970e-57 | -8.615850e-47 |
| Msa0173830 | Msa0430620 | 0.843477 | 1.367953e-58 | -8.615850e-47 |
| Msa0182930 | Msa0430620 | 0.834542 | 2.821447e-56 | -8.615850e-47 |
| Msa0183620 | Msa0430620 | 0.801371 | 9.292829e-49 | -8.615850e-47 |
| Msa0183640 | Msa0430620 | -0.825708 | 4.046394e-54 | -8.615850e-47 |
| Msa0184960 | Msa0430620 | 0.802401 | 5.708673e-49 | -8.615850e-47 |
| Msa0197940 | Msa0430620 | -0.808601 | 2.859207e-50 | -8.615850e-47 |
| Msa0200950 | Msa0430620 | -0.833317 | 5.716044e-56 | -8.615850e-47 |
| Msa0207000 | Msa0430620 | 0.829951 | 3.862332e-55 | -8.615850e-47 |
| Msa0208630 | Msa0430620 | 0.808120 | 3.620626e-50 | -8.615850e-47 |
| Msa0230550 | Msa0430620 | -0.801835 | 7.466248e-49 | -8.615850e-47 |
| Msa0238070 | Msa0430620 | -0.820686 | 6.015929e-53 | -8.615850e-47 |
| Msa0238250 | Msa0430620 | -0.801857 | 7.386641e-49 | -8.615850e-47 |
| Msa0376450 | Msa0430620 | -0.819743 | 9.895337e-53 | -8.615850e-47 |
| Msa0376510 | Msa0430620 | 0.852869 | 3.477992e-61 | -8.615850e-47 |
| Msa0380040 | Msa0430620 | 0.844460 | 7.459602e-59 | -8.615850e-47 |
| Msa0380890 | Msa0430620 | 0.817806 | 2.724525e-52 | -8.615850e-47 |
| Msa0414950 | Msa0430620 | -0.805147 | 1.536104e-49 | -8.615850e-47 |
| Msa0416890 | Msa0430620 | -0.813409 | 2.597500e-51 | -8.615850e-47 |
| Msa0421780 | Msa0430620 | -0.809656 | 1.699003e-50 | -8.615850e-47 |
| Msa0423360 | Msa0430620 | -0.813978 | 1.946398e-51 | -8.615850e-47 |
| Msa0424920 | Msa0430620 | 0.805665 | 1.196514e-49 | -8.615850e-47 |
| Msa0425010 | Msa0430620 | 0.810726 | 9.986260e-51 | -8.615850e-47 |
| Msa0425050 | Msa0430620 | 0.859570 | 3.774252e-63 | -8.615850e-47 |
| Msa0429290 | Msa0430620 | 0.836965 | 6.869564e-57 | -8.615850e-47 |
| Msa0430620 | Msa0430790 | 0.817385 | 3.389390e-52 | -8.615850e-47 |
| Msa0430620 | Msa0431430 | 0.805430 | 1.339867e-49 | -8.615850e-47 |
| Msa0430620 | Msa0442670 | 0.804984 | 1.661151e-49 | -8.615850e-47 |
| Msa0430620 | Msa0448080 | 0.804588 | 2.009988e-49 | -8.615850e-47 |
| Msa0430620 | Msa0462590 | 0.806277 | 8.895959e-50 | -8.615850e-47 |
| Msa0430620 | Msa0463590 | -0.842324 | 2.772924e-58 | -8.615850e-47 |
| Msa0430620 | Msa0465790 | 0.841564 | 4.402240e-58 | -8.615850e-47 |
| Msa0430620 | Msa0467900 | -0.811547 | 6.627875e-51 | -8.615850e-47 |
| Msa0430620 | Msa0467960 | -0.801362 | 9.331543e-49 | -8.615850e-47 |
| Msa0430620 | Msa0471720 | -0.819791 | 9.649303e-53 | -8.615850e-47 |
| Msa0430620 | Msa0472740 | 0.811133 | 8.152985e-51 | -8.615850e-47 |
| Msa0430620 | Msa0475580 | 0.833201 | 6.108880e-56 | -8.615850e-47 |
| Msa0430620 | Msa0477830 | 0.808530 | 2.960500e-50 | -8.615850e-47 |
| Msa0430620 | Msa0480320 | 0.806076 | 9.802774e-50 | -8.615850e-47 |
| Msa0430620 | Msa0483860 | 0.801867 | 7.351534e-49 | -8.615850e-47 |
| Msa0430620 | Msa0484690 | 0.813131 | 2.988715e-51 | -8.615850e-47 |
| Msa0430620 | Msa0490350 | 0.819725 | 9.986882e-53 | -8.615850e-47 |
| Msa0430620 | Msa0508200 | 0.815439 | 9.238506e-52 | -8.615850e-47 |
| Msa0430620 | Msa0516320 | 0.804435 | 2.162960e-49 | -8.615850e-47 |
| Msa0430620 | Msa0516510 | -0.821778 | 3.369255e-53 | -8.615850e-47 |
| Msa0430620 | Msa0519220 | 0.838216 | 3.279807e-57 | -8.615850e-47 |
| Msa0430620 | Msa0524050 | 0.801384 | 9.237799e-49 | -8.615850e-47 |
| Msa0430620 | Msa0524120 | 0.818282 | 2.126529e-52 | -8.615850e-47 |
| Msa0430620 | Msa0526640 | -0.801103 | 1.054498e-48 | -8.615850e-47 |
| Msa0430620 | Msa0535030 | 0.828757 | 7.528969e-55 | -8.615850e-47 |
| Msa0430620 | Msa0535060 | 0.830606 | 2.671294e-55 | -8.615850e-47 |
| Msa0430620 | Msa0546380 | 0.820147 | 7.996923e-53 | -8.615850e-47 |
| Msa0430620 | Msa0553220 | -0.828570 | 8.352576e-55 | -8.615850e-47 |
| Msa0430620 | Msa0577940 | -0.852535 | 4.330971e-61 | -8.615850e-47 |
| Msa0430620 | Msa0582110 | 0.801117 | 1.047642e-48 | -8.615850e-47 |
| Msa0430620 | Msa0591770 | 0.822275 | 2.584088e-53 | -8.615850e-47 |
| Msa0430620 | Msa0605170 | 0.835952 | 1.243520e-56 | -8.615850e-47 |
| Msa0430620 | Msa0607200 | 0.838637 | 2.554739e-57 | -8.615850e-47 |
| Msa0430620 | Msa0607340 | -0.849409 | 3.293802e-60 | -8.615850e-47 |
| Msa0430620 | Msa0618010 | 0.816195 | 6.267861e-52 | -8.615850e-47 |
| Msa0430620 | Msa0618510 | 0.802247 | 6.141474e-49 | -8.615850e-47 |
| Msa0430620 | Msa0620810 | 0.807895 | 4.042652e-50 | -8.615850e-47 |
| Msa0430620 | Msa0621120 | 0.808845 | 2.535601e-50 | -8.615850e-47 |
| Msa0430620 | Msa0624730 | 0.806260 | 8.966894e-50 | -8.615850e-47 |
| Msa0430620 | Msa0625530 | -0.854885 | 9.133199e-62 | -8.615850e-47 |
| Msa0430620 | Msa0634510 | -0.804399 | 2.201205e-49 | -8.615850e-47 |
| Msa0430620 | Msa0638280 | 0.802487 | 5.481310e-49 | -8.615850e-47 |
| Msa0430620 | Msa0638320 | 0.812557 | 3.992962e-51 | -8.615850e-47 |
| Msa0430620 | Msa0642650 | 0.805054 | 1.606320e-49 | -8.615850e-47 |
| Msa0430620 | Msa0646640 | 0.831224 | 1.884789e-55 | -8.615850e-47 |
| Msa0430620 | Msa0647000 | 0.803288 | 3.744910e-49 | -8.615850e-47 |
| Msa0430620 | Msa0647450 | -0.835936 | 1.255467e-56 | -8.615850e-47 |
| Msa0430620 | Msa0651400 | 0.815703 | 8.071265e-52 | -8.615850e-47 |
| Msa0430620 | Msa0655660 | -0.819918 | 9.024373e-53 | -8.615850e-47 |
| Msa0430620 | Msa0657670 | 0.836267 | 1.034435e-56 | -8.615850e-47 |
| Msa0430620 | Msa0669850 | 0.814569 | 1.441428e-51 | -8.615850e-47 |
| Msa0430620 | Msa0677270 | 0.815769 | 7.800322e-52 | -8.615850e-47 |
| Msa0430620 | Msa0677820 | 0.805459 | 1.321176e-49 | -8.615850e-47 |
| Msa0430620 | Msa0701030 | 0.812521 | 4.066338e-51 | -8.615850e-47 |
| Msa0430620 | Msa0714600 | 0.825721 | 4.015716e-54 | -8.615850e-47 |
| Msa0430620 | Msa0717920 | -0.836852 | 7.337449e-57 | -8.615850e-47 |
| Msa0430620 | Msa0725480 | -0.809356 | 1.970397e-50 | -8.615850e-47 |
| Msa0430620 | Msa0733000 | 0.808471 | 3.046921e-50 | -8.615850e-47 |
| Msa0430620 | Msa0734660 | 0.834946 | 2.233723e-56 | -8.615850e-47 |
| Msa0430620 | Msa0738630 | -0.811717 | 6.087003e-51 | -8.615850e-47 |
| Msa0430620 | Msa0743260 | 0.824985 | 5.996874e-54 | -8.615850e-47 |
| Msa0430620 | Msa0766100 | -0.822981 | 1.770967e-53 | -8.615850e-47 |
| Msa0430620 | Msa0776220 | 0.846440 | 2.168946e-59 | -8.615850e-47 |
| Msa0430620 | Msa0783760 | -0.808273 | 3.358664e-50 | -8.615850e-47 |
| Msa0430620 | Msa0789270 | 0.825602 | 4.285336e-54 | -8.615850e-47 |
| Msa0430620 | Msa0789280 | 0.823752 | 1.169331e-53 | -8.615850e-47 |
| Msa0430620 | Msa0789290 | 0.821203 | 4.574169e-53 | -8.615850e-47 |
| Msa0430620 | Msa0789300 | 0.821149 | 4.707549e-53 | -8.615850e-47 |
| Msa0430620 | Msa0789570 | 0.802848 | 4.616300e-49 | -8.615850e-47 |
| Msa0430620 | Msa0804120 | 0.809666 | 1.690396e-50 | -8.615850e-47 |
| Msa0430620 | Msa0813320 | -0.847462 | 1.138888e-59 | -8.615850e-47 |
| Msa0430620 | Msa0813670 | 0.835372 | 1.743767e-56 | -8.615850e-47 |
| Msa0430620 | Msa0813720 | 0.843726 | 1.173891e-58 | -8.615850e-47 |
| Msa0430620 | Msa0818980 | -0.802998 | 4.298735e-49 | -8.615850e-47 |
| Msa0430620 | Msa0819030 | -0.803932 | 2.753609e-49 | -8.615850e-47 |
| Msa0430620 | Msa0828570 | 0.819139 | 1.358272e-52 | -8.615850e-47 |
| Msa0430620 | Msa0842210 | 0.809351 | 1.974860e-50 | -8.615850e-47 |
| Msa0430620 | Msa0854120 | 0.826756 | 2.278450e-54 | -8.615850e-47 |
| Msa0430620 | Msa0860080 | 0.803552 | 3.300683e-49 | -8.615850e-47 |
| Msa0430620 | Msa0867050 | -0.863849 | 1.855747e-64 | -8.615850e-47 |
| Msa0430620 | Msa0874500 | 0.825646 | 4.185324e-54 | -8.615850e-47 |
| Msa0430620 | Msa0878980 | -0.807784 | 4.267556e-50 | -8.615850e-47 |
| Msa0430620 | Msa0890250 | 0.810655 | 1.034598e-50 | -8.615850e-47 |
| Msa0430620 | Msa0907700 | 0.804544 | 2.052689e-49 | -8.615850e-47 |
| Msa0430620 | Msa0909710 | 0.803204 | 3.897094e-49 | -8.615850e-47 |
| Msa0430620 | Msa0925160 | 0.807248 | 5.545131e-50 | -8.615850e-47 |
| Msa0430620 | Msa0936270 | 0.801530 | 8.621151e-49 | -8.615850e-47 |
| Msa0430620 | Msa0937940 | 0.800601 | 1.335064e-48 | -8.615850e-47 |
| Msa0430620 | Msa0967650 | -0.821529 | 3.847537e-53 | -8.615850e-47 |
| Msa0430620 | Msa0980500 | 0.808539 | 2.947202e-50 | -8.615850e-47 |
| Msa0430620 | Msa0981740 | 0.802268 | 6.080470e-49 | -8.615850e-47 |
| Msa0430620 | Msa1003310 | 0.807709 | 4.427881e-50 | -8.615850e-47 |
| Msa0430620 | Msa1004210 | 0.809616 | 1.733021e-50 | -8.615850e-47 |
| Msa0430620 | Msa1018020 | -0.816160 | 6.382511e-52 | -8.615850e-47 |
| Msa0430620 | Msa1018790 | 0.806079 | 9.788370e-50 | -8.615850e-47 |
| Msa0430620 | Msa1036390 | 0.817013 | 4.109049e-52 | -8.615850e-47 |
| Msa0430620 | Msa1037000 | 0.811315 | 7.445248e-51 | -8.615850e-47 |
| Msa0430620 | Msa1038050 | 0.837483 | 5.061830e-57 | -8.615850e-47 |
| Msa0430620 | Msa1040830 | 0.816184 | 6.304400e-52 | -8.615850e-47 |
| Msa0430620 | Msa1046610 | 0.815161 | 1.065519e-51 | -8.615850e-47 |
| Msa0430620 | Msa1058010 | 0.822434 | 2.374075e-53 | -8.615850e-47 |
| Msa0430620 | Msa1072460 | -0.835956 | 1.240779e-56 | -8.615850e-47 |
| Msa0430620 | Msa1076680 | 0.801181 | 1.016143e-48 | -8.615850e-47 |
| Msa0430620 | Msa1080460 | 0.806121 | 9.593259e-50 | -8.615850e-47 |
| Msa0430620 | Msa1082700 | 0.809831 | 1.557948e-50 | -8.615850e-47 |
| Msa0430620 | Msa1083150 | 0.805641 | 1.210228e-49 | -8.615850e-47 |
| Msa0430620 | Msa1097380 | 0.806147 | 9.473858e-50 | -8.615850e-47 |
| Msa0430620 | Msa1102540 | 0.821772 | 3.380445e-53 | -8.615850e-47 |
| Msa0430620 | Msa1111630 | 0.830300 | 3.174771e-55 | -8.615850e-47 |
| Msa0430620 | Msa1112000 | 0.832711 | 8.086670e-56 | -8.615850e-47 |
| Msa0430620 | Msa1129560 | 0.828441 | 8.972870e-55 | -8.615850e-47 |
| Msa0430620 | Msa1150230 | 0.808894 | 2.474701e-50 | -8.615850e-47 |
| Msa0430620 | Msa1159990 | 0.801548 | 8.547910e-49 | -8.615850e-47 |
| Msa0430620 | Msa1166140 | -0.818442 | 1.956332e-52 | -8.615850e-47 |
| Msa0430620 | Msa1166240 | -0.823728 | 1.184949e-53 | -8.615850e-47 |
| Msa0430620 | Msa1167170 | 0.813316 | 2.722904e-51 | -8.615850e-47 |
| Msa0430620 | Msa1171690 | 0.855263 | 7.093235e-62 | -8.615850e-47 |
| Msa0430620 | Msa1174010 | 0.815362 | 9.609752e-52 | -8.615850e-47 |
| Msa0430620 | Msa1187840 | 0.808914 | 2.450514e-50 | -8.615850e-47 |
| Msa0430620 | Msa1199560 | 0.812923 | 3.320783e-51 | -8.615850e-47 |
| Msa0430620 | Msa1200880 | -0.814563 | 1.445878e-51 | -8.615850e-47 |
| Msa0430620 | Msa1210770 | 0.826171 | 3.140355e-54 | -8.615850e-47 |
| Msa0430620 | Msa1221560 | 0.801602 | 8.333707e-49 | -8.615850e-47 |
| Msa0430620 | Msa1223840 | 0.800363 | 1.492640e-48 | -8.615850e-47 |
| Msa0430620 | Msa1224670 | 0.812132 | 4.945366e-51 | -8.615850e-47 |
| Msa0430620 | Msa1246740 | 0.811198 | 7.892176e-51 | -8.615850e-47 |
| Msa0430620 | Msa1249870 | 0.816102 | 6.575048e-52 | -8.615850e-47 |
| Msa0430620 | Msa1253930 | -0.830724 | 2.499607e-55 | -8.615850e-47 |
| Msa0430620 | Msa1260130 | 0.803493 | 3.395293e-49 | -8.615850e-47 |
| Msa0430620 | Msa1261470 | 0.816345 | 5.802248e-52 | -8.615850e-47 |
| Msa0430620 | Msa1262310 | 0.816113 | 6.537375e-52 | -8.615850e-47 |
| Msa0430620 | Msa1263030 | 0.804048 | 2.604229e-49 | -8.615850e-47 |
| Msa0430620 | Msa1265960 | 0.808503 | 2.999555e-50 | -8.615850e-47 |
| Msa0430620 | Msa1280120 | 0.806427 | 8.271707e-50 | -8.615850e-47 |
| Msa0430620 | Msa1280130 | 0.812535 | 4.036945e-51 | -8.615850e-47 |
| Msa0430620 | Msa1283170 | 0.804609 | 1.989742e-49 | -8.615850e-47 |
| Msa0430620 | Msa1292730 | 0.805274 | 1.444732e-49 | -8.615850e-47 |
| Msa0430620 | Msa1304180 | 0.821292 | 4.362920e-53 | -8.615850e-47 |
| Msa0430620 | Msa1307660 | -0.841248 | 5.331652e-58 | -8.615850e-47 |
| Msa0430620 | Msa1316780 | 0.812720 | 3.678989e-51 | -8.615850e-47 |
| Msa0430620 | Msa1316830 | 0.819818 | 9.510771e-53 | -8.615850e-47 |
| Msa0430620 | Msa1323190 | 0.806374 | 8.486650e-50 | -8.615850e-47 |
| Msa0430620 | Msa1328700 | 0.801206 | 1.004434e-48 | -8.615850e-47 |
| Msa0430620 | Msa1335970 | -0.813513 | 2.463626e-51 | -8.615850e-47 |
| Msa0430620 | Msa1337090 | 0.803609 | 3.213431e-49 | -8.615850e-47 |
| Msa0430620 | Msa1347620 | 0.855862 | 4.745530e-62 | -8.615850e-47 |
| Msa0430620 | Msa1364910 | 0.807763 | 4.312506e-50 | -8.615850e-47 |
| Msa0430620 | Msa1374440 | 0.810228 | 1.279301e-50 | -8.615850e-47 |
| Msa0430620 | Msa1385900 | 0.802112 | 6.546248e-49 | -8.615850e-47 |
| Msa0430620 | Msa1388790 | -0.802274 | 6.063606e-49 | -8.615850e-47 |
| Msa0430620 | Msa1395230 | -0.856882 | 2.382420e-62 | -8.615850e-47 |
| Msa0430620 | Msa1396750 | -0.839412 | 1.609671e-57 | -8.615850e-47 |
| Msa0430620 | Msa1403930 | -0.846164 | 2.579986e-59 | -8.615850e-47 |
| Msa0430620 | Msa1404730 | 0.806828 | 6.806409e-50 | -8.615850e-47 |
| Msa0430620 | Msa1410430 | -0.862520 | 4.781124e-64 | -8.615850e-47 |
| Msa0430620 | Msa1418200 | 0.823150 | 1.617515e-53 | -8.615850e-47 |
| Msa0430620 | Msa1419800 | -0.807289 | 5.435363e-50 | -8.615850e-47 |
| Msa0430620 | Msa1422270 | 0.807026 | 6.179194e-50 | -8.615850e-47 |
| Msa0430620 | Msa1426030 | 0.800609 | 1.330024e-48 | -8.615850e-47 |
| Msa0430620 | Msa1427830 | 0.801630 | 8.222955e-49 | -8.615850e-47 |
| Msa0430620 | Msa1428420 | 0.802088 | 6.623350e-49 | -8.615850e-47 |
| Msa0430620 | Msa1440000 | 0.803952 | 2.727100e-49 | -8.615850e-47 |
| Msa0430620 | Msa1440610 | 0.802546 | 5.329441e-49 | -8.615850e-47 |
| Msa0430620 | Msa1449250 | -0.803763 | 2.985108e-49 | -8.615850e-47 |
| Msa0430620 | Msa1449880 | 0.810367 | 1.194203e-50 | -8.615850e-47 |
| Msa0430620 | Msa1453620 | 0.817316 | 3.513290e-52 | -8.615850e-47 |
| Msa0430620 | Msa1453780 | -0.837060 | 6.493456e-57 | -8.615850e-47 |
| Msa0430620 | Msa1454110 | 0.803890 | 2.808457e-49 | -8.615850e-47 |
| Msa0430620 | Msa1456810 | 0.808011 | 3.819118e-50 | -8.615850e-47 |
| Msa0430620 | Msa1457440 | 0.802295 | 6.002375e-49 | -8.615850e-47 |
| Msa0430620 | Msa1464560 | 0.820006 | 8.615816e-53 | -8.615850e-47 |
| Msa0240780 | Msa0430620 | 0.810785 | 9.697438e-51 | -8.615850e-47 |
| Msa0244270 | Msa0430620 | 0.824703 | 6.990939e-54 | -8.615850e-47 |
| Msa0252180 | Msa0430620 | 0.804202 | 2.418896e-49 | -8.615850e-47 |
| Msa0258670 | Msa0430620 | -0.841647 | 4.185221e-58 | -8.615850e-47 |
| Msa0258920 | Msa0430620 | -0.803319 | 3.688842e-49 | -8.615850e-47 |
| Msa0259860 | Msa0430620 | -0.820406 | 6.974197e-53 | -8.615850e-47 |
| Msa0260950 | Msa0430620 | -0.802829 | 4.658119e-49 | -8.615850e-47 |
| Msa0275030 | Msa0430620 | 0.809456 | 1.875610e-50 | -8.615850e-47 |
| Msa0280490 | Msa0430620 | 0.805240 | 1.468615e-49 | -8.615850e-47 |
| Msa0280900 | Msa0430620 | 0.813474 | 2.512810e-51 | -8.615850e-47 |
| Msa0288240 | Msa0430620 | 0.827331 | 1.659660e-54 | -8.615850e-47 |
| Msa0288330 | Msa0430620 | 0.824937 | 6.157892e-54 | -8.615850e-47 |
| Msa0296760 | Msa0430620 | 0.818322 | 2.082370e-52 | -8.615850e-47 |
| Msa0298390 | Msa0430620 | -0.804022 | 2.636641e-49 | -8.615850e-47 |
| Msa0298940 | Msa0430620 | 0.824137 | 9.498304e-54 | -8.615850e-47 |
| Msa0298970 | Msa0430620 | 0.820451 | 6.813674e-53 | -8.615850e-47 |
| Msa0301180 | Msa0430620 | 0.811488 | 6.826991e-51 | -8.615850e-47 |
| Msa0315930 | Msa0430620 | -0.807916 | 4.000009e-50 | -8.615850e-47 |
| Msa0318250 | Msa0430620 | 0.881533 | 2.218332e-70 | -8.615850e-47 |
| Msa0318270 | Msa0430620 | 0.839084 | 1.957386e-57 | -8.615850e-47 |
| Msa0318310 | Msa0430620 | 0.839009 | 2.047627e-57 | -8.615850e-47 |
| Msa0320100 | Msa0430620 | 0.801615 | 8.280829e-49 | -8.615850e-47 |
| Msa0326670 | Msa0430620 | 0.826728 | 2.313767e-54 | -8.615850e-47 |
| Msa0342200 | Msa0430620 | 0.818648 | 1.756330e-52 | -8.615850e-47 |
| Msa0342360 | Msa0430620 | 0.808026 | 3.790936e-50 | -8.615850e-47 |
| Msa0358170 | Msa0430620 | 0.808162 | 3.546364e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430620 | MtrunA17_Chr3g0134581 | 98.947 | 95 | 1 | 0 | 1 | 95 | 1 | 95 | 7.85e-62 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 69 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGGACTTGGTTGGGGTTT+TGG | 0.178577 | 3_2:-82521389 | Msa0430620:CDS |
| TATCGTGAATTTCTTACTTC+TGG | 0.223390 | 3_2:+82521263 | None:intergenic |
| CGTTGGAGTGGGACTTGGTT+GGG | 0.226520 | 3_2:-82521396 | Msa0430620:CDS |
| TTCGGTGTTGGTTGCGGTTT+CGG | 0.256247 | 3_2:-82523326 | Msa0430620:CDS |
| TTCGGTGTTGGATGGGGTTT+CGG | 0.286806 | 3_2:-82523308 | Msa0430620:CDS |
| TGTTTCATTATAATCAAAAT+AGG | 0.289871 | 3_2:+82521001 | None:intergenic |
| ACAGTATCTTAATTCTTAAC+TGG | 0.314778 | 3_2:-82523530 | Msa0430620:five_prime_UTR |
| AACGGTGCCGGCATCGGATT+TGG | 0.316824 | 3_2:-82523443 | Msa0430620:intron |
| GCTCATGGCCGACCAGTAAT+AGG | 0.342330 | 3_2:+82521196 | None:intergenic |
| CCATTGAACTTCTTGGGTCT+TGG | 0.348663 | 3_2:-82522388 | Msa0430620:CDS |
| TCGGGTCTTGGGTCGAGATC+CGG | 0.355933 | 3_2:-82523620 | Msa0430620:five_prime_UTR |
| CTTAAGAGTGGATCGGGTCT+TGG | 0.360142 | 3_2:-82523632 | Msa0430620:five_prime_UTR |
| AGGAGTGGAATTTGATAGTA+AGG | 0.379797 | 3_2:-82521321 | Msa0430620:CDS |
| GTTGCGGTTTCGGTGTTGGA+TGG | 0.386697 | 3_2:-82523316 | Msa0430620:CDS |
| TTGCGGTTTCGGTGTTGGAT+GGG | 0.396660 | 3_2:-82523315 | Msa0430620:CDS |
| AGGTATGCCATTGAACTTCT+TGG | 0.399353 | 3_2:-82522395 | Msa0430620:CDS |
| TGTGGCGTTGGAGTGGGACT+TGG | 0.400944 | 3_2:-82521401 | Msa0430620:CDS |
| AACTTCTTGGGTCTTGGTGC+AGG | 0.405749 | 3_2:-82522382 | Msa0430620:intron |
| CGGGTCTTGGGTCGAGATCC+GGG | 0.413318 | 3_2:-82523619 | Msa0430620:five_prime_UTR |
| GTTGGAGTGGGACTTGGTTG+GGG | 0.418393 | 3_2:-82521395 | Msa0430620:CDS |
| TTAAGAGTGGATCGGGTCTT+GGG | 0.422044 | 3_2:-82523631 | Msa0430620:five_prime_UTR |
| TTGGTACTGCTTATGGTAGC+AGG | 0.426214 | 3_2:-82521370 | Msa0430620:CDS |
| AGATTGCTACCACCTATTAC+TGG | 0.428885 | 3_2:-82521208 | Msa0430620:three_prime_UTR |
| AGAAAAGAAAAGAAAAGAAA+TGG | 0.430338 | 3_2:-82523480 | Msa0430620:exon |
| GGTATGCCATTGAACTTCTT+GGG | 0.437229 | 3_2:-82522394 | Msa0430620:CDS |
| GGAGGCTGTGGCGTTGGAGT+GGG | 0.439466 | 3_2:-82521407 | Msa0430620:CDS |
| ATTACTGGTCGGCCATGAGC+AGG | 0.440227 | 3_2:-82521193 | Msa0430620:three_prime_UTR |
| TTATTTGTGTCCGTAGGCAT+AGG | 0.446472 | 3_2:+82521160 | None:intergenic |
| TGGAGGCTGTGGCGTTGGAG+TGG | 0.449916 | 3_2:-82521408 | Msa0430620:CDS |
| TAAGGAGAAAAGTGATAGCA+TGG | 0.453419 | 3_2:-82521303 | Msa0430620:CDS |
| GCGTTGGAGTGGGACTTGGT+TGG | 0.454156 | 3_2:-82521397 | Msa0430620:CDS |
| GCAGGTTTCGGTGTTGGTTG+CGG | 0.456771 | 3_2:-82523332 | Msa0430620:intron |
| GTTGGTTGCGGTTTCGGTGT+TGG | 0.457746 | 3_2:-82523320 | Msa0430620:CDS |
| TGCGGTTTCGGTGTTGGATG+GGG | 0.461719 | 3_2:-82523314 | Msa0430620:CDS |
| GAAATTCTTAAGAGTGGATC+GGG | 0.462861 | 3_2:-82523638 | Msa0430620:five_prime_UTR |
| TGAATTTCTTACTTCTGGAC+TGG | 0.462985 | 3_2:+82521268 | None:intergenic |
| AATTTCAACGGTGCCGGCAT+CGG | 0.473678 | 3_2:-82523449 | Msa0430620:CDS |
| TTAGTAGTTTATGAAATGAA+TGG | 0.474958 | 3_2:-82521065 | Msa0430620:three_prime_UTR |
| TGTGTGTGGACGGTAGAATT+TGG | 0.475975 | 3_2:+82523595 | None:intergenic |
| TTGTCAAGGATCACATTTCA+AGG | 0.480370 | 3_2:-82521341 | Msa0430620:CDS |
| GACACAAATAACATGAAGCC+TGG | 0.487604 | 3_2:-82521148 | Msa0430620:three_prime_UTR |
| CTGCTTATGGTAGCAGGTAT+CGG | 0.496946 | 3_2:-82521364 | Msa0430620:CDS |
| AGCAATCTACATTAAATTGA+AGG | 0.501031 | 3_2:+82521223 | None:intergenic |
| CGGCCATGAGCAGGGTTGCA+TGG | 0.510852 | 3_2:-82521184 | Msa0430620:three_prime_UTR |
| TCTAAAGAAATTCTTAAGAG+TGG | 0.510953 | 3_2:-82523644 | None:intergenic |
| ATCACAAATTTCAACGGTGC+CGG | 0.513111 | 3_2:-82523455 | Msa0430620:CDS |
| CAAGATTTGTATATCTCCCC+AGG | 0.516423 | 3_2:+82521130 | None:intergenic |
| GGGCCATGCAACCCTGCTCA+TGG | 0.525954 | 3_2:+82521181 | None:intergenic |
| CCAAGACCCAAGAAGTTCAA+TGG | 0.528859 | 3_2:+82522388 | None:intergenic |
| AGAAATTCTTAAGAGTGGAT+CGG | 0.529883 | 3_2:-82523639 | Msa0430620:five_prime_UTR |
| GAAGGTGGAGGCTGTGGCGT+TGG | 0.533993 | 3_2:-82521413 | Msa0430620:intron |
| ACACAAATAACATGAAGCCT+GGG | 0.541155 | 3_2:-82521147 | Msa0430620:three_prime_UTR |
| TATTTGTGTCCGTAGGCATA+GGG | 0.551786 | 3_2:+82521161 | None:intergenic |
| TTGCATACCAAATCCGATGC+CGG | 0.555970 | 3_2:+82523436 | None:intergenic |
| TTTGTTTCTATGCAGAACAA+AGG | 0.556011 | 3_2:+82523503 | None:intergenic |
| GGTGTTGGATGGGGTTTCGG+AGG | 0.556898 | 3_2:-82523305 | Msa0430620:intron |
| GTTGCATGGCCCTATGCCTA+CGG | 0.562984 | 3_2:-82521170 | Msa0430620:three_prime_UTR |
| AAGGATCACATTTCAAGGAG+TGG | 0.579480 | 3_2:-82521336 | Msa0430620:CDS |
| TTACTGGTCGGCCATGAGCA+GGG | 0.589033 | 3_2:-82521192 | Msa0430620:three_prime_UTR |
| AGAAGTAAGAAATTCACGAT+AGG | 0.604548 | 3_2:-82521261 | Msa0430620:exon |
| ATGGTAATCACAAATTTCAA+CGG | 0.616941 | 3_2:-82523461 | Msa0430620:CDS |
| TGGACGGTAGAATTTGGACC+CGG | 0.625245 | 3_2:+82523601 | None:intergenic |
| GTAGCAGGTATCGGTTGTCA+AGG | 0.627465 | 3_2:-82521355 | Msa0430620:CDS |
| TTCATGTTATTTGTGTCCGT+AGG | 0.628862 | 3_2:+82521154 | None:intergenic |
| TGCTACCACCTATTACTGGT+CGG | 0.635169 | 3_2:-82521204 | Msa0430620:three_prime_UTR |
| ACAGTCTACTCTAGTGTGTG+TGG | 0.642109 | 3_2:+82523581 | None:intergenic |
| TCTACTCTAGTGTGTGTGGA+CGG | 0.650622 | 3_2:+82523585 | None:intergenic |
| CATGGCCGACCAGTAATAGG+TGG | 0.669558 | 3_2:+82521199 | None:intergenic |
| CACAAATAACATGAAGCCTG+GGG | 0.684496 | 3_2:-82521146 | Msa0430620:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAGAAAAAAAAAATTATAG+CGG | + | chr3_2:82521715-82521734 | None:intergenic | 15.0% |
| !! | AAAAAAAATAGAAAAAGAGA+AGG | + | chr3_2:82522287-82522306 | None:intergenic | 15.0% |
| !!! | TTTGTTAGTCTTATTTAATA+AGG | - | chr3_2:82523037-82523056 | Msa0430620:intron | 15.0% |
| !! | ATTTAATAAGGATATCAATT+TGG | - | chr3_2:82523049-82523068 | Msa0430620:intron | 15.0% |
| !! | TGTTTCATTATAATCAAAAT+AGG | + | chr3_2:82523622-82523641 | None:intergenic | 15.0% |
| !! | AGAAAAGAAAAGAAAAGAAA+TGG | - | chr3_2:82521140-82521159 | Msa0430620:three_prime_UTR | 20.0% |
| !!! | TTTCATTTCTCAATTCTTTT+AGG | - | chr3_2:82521356-82521375 | Msa0430620:CDS | 20.0% |
| !!! | TTTCATTAGTTGTTTTTTCT+CGG | - | chr3_2:82521503-82521522 | Msa0430620:intron | 20.0% |
| !!! | AATTTTTTTTTTCTTCCCAT+AGG | - | chr3_2:82521719-82521738 | Msa0430620:intron | 20.0% |
| !! | GAAATTAATAGAAAAAGAGA+AGG | + | chr3_2:82522317-82522336 | None:intergenic | 20.0% |
| !! | TTTCAATTCTCAGTATTTAA+TGG | - | chr3_2:82522333-82522352 | Msa0430620:intron | 20.0% |
| !! | TATCATGTATGTTAATTTCT+AGG | - | chr3_2:82522402-82522421 | Msa0430620:intron | 20.0% |
| !! | AAATAAAAAATCAGTGTAGA+GGG | - | chr3_2:82522868-82522887 | Msa0430620:intron | 20.0% |
| !! | AATTCCATCAAATCTAATAA+TGG | + | chr3_2:82522895-82522914 | None:intergenic | 20.0% |
| !! | GAATCAATGATTTATTAGAT+AGG | - | chr3_2:82523075-82523094 | Msa0430620:intron | 20.0% |
| !! | TTAGTAGTTTATGAAATGAA+TGG | - | chr3_2:82523555-82523574 | Msa0430620:five_prime_UTR | 20.0% |
| ! | ACAGTATCTTAATTCTTAAC+TGG | - | chr3_2:82521090-82521109 | Msa0430620:three_prime_UTR | 25.0% |
| ! | ATGGTAATCACAAATTTCAA+CGG | - | chr3_2:82521159-82521178 | Msa0430620:three_prime_UTR | 25.0% |
| !! | TTTTATTCTTTTGCAGGTTT+CGG | - | chr3_2:82521276-82521295 | Msa0430620:CDS | 25.0% |
| ! | ATGAAATTGAAGGATTGAAA+CGG | + | chr3_2:82521342-82521361 | None:intergenic | 25.0% |
| ! | GAATTGAGAAATGAAATTGA+AGG | + | chr3_2:82521352-82521371 | None:intergenic | 25.0% |
| ! | TCTGATATGAGAAATTCTAA+TGG | - | chr3_2:82521756-82521775 | Msa0430620:intron | 25.0% |
| ! | AAAACTGAACAATAGGTATA+TGG | + | chr3_2:82522037-82522056 | None:intergenic | 25.0% |
| ! | AGTAACAAAAACTGAACAAT+AGG | + | chr3_2:82522044-82522063 | None:intergenic | 25.0% |
| ! | GAAATTAACATACATGATAC+TGG | + | chr3_2:82522401-82522420 | None:intergenic | 25.0% |
| ! | ATATGGTTGACAACAATATT+AGG | - | chr3_2:82522445-82522464 | Msa0430620:intron | 25.0% |
| !! | TCTAGAAATAAGGATTTTTG+AGG | + | chr3_2:82522475-82522494 | None:intergenic | 25.0% |
| !! | TATGCATAACTCTAGAAATA+AGG | + | chr3_2:82522485-82522504 | None:intergenic | 25.0% |
| ! | AAGAAATTGAAGAGAAATAC+CGG | + | chr3_2:82522621-82522640 | None:intergenic | 25.0% |
| ! | GAAATAAAAAATCAGTGTAG+AGG | - | chr3_2:82522867-82522886 | Msa0430620:intron | 25.0% |
| ! | TAAAAGAAAGCAACCTATTA+TGG | - | chr3_2:82522936-82522955 | Msa0430620:intron | 25.0% |
| !!! | TGCAAATAATAGTCATTTTG+TGG | + | chr3_2:82523133-82523152 | None:intergenic | 25.0% |
| ! | CAAAATGACTATTATTTGCA+AGG | - | chr3_2:82523133-82523152 | Msa0430620:intron | 25.0% |
| !! | TATGCTCAATTTCATTTTGA+AGG | - | chr3_2:82523189-82523208 | Msa0430620:intron | 25.0% |
| ! | AGCAATCTACATTAAATTGA+AGG | + | chr3_2:82523400-82523419 | None:intergenic | 25.0% |
| AGAAATTCTTAAGAGTGGAT+CGG | - | chr3_2:82520981-82521000 | Msa0430620:three_prime_UTR | 30.0% | |
| !! | TTTGTTTCTATGCAGAACAA+AGG | + | chr3_2:82521120-82521139 | None:intergenic | 30.0% |
| AATGGATGAATGTTGAGAAA+TGG | + | chr3_2:82521222-82521241 | None:intergenic | 30.0% | |
| AATTAGATAGAGATTGGAGA+AGG | + | chr3_2:82521247-82521266 | None:intergenic | 30.0% | |
| !!! | GCTGTTTTTTATTCTTTTGC+AGG | - | chr3_2:82521270-82521289 | Msa0430620:CDS | 30.0% |
| TCACTTTAGACAAATTCGTT+AGG | - | chr3_2:82521446-82521465 | Msa0430620:intron | 30.0% | |
| ATGCTTGCTTATATAACTGA+TGG | - | chr3_2:82521470-82521489 | Msa0430620:intron | 30.0% | |
| ATAATAGGAATCTAGAAAGC+AGG | + | chr3_2:82521633-82521652 | None:intergenic | 30.0% | |
| CTAGATTCCTATTATTCATC+CGG | - | chr3_2:82521638-82521657 | Msa0430620:intron | 30.0% | |
| !! | TTGACATTTTGACAGTTACA+TGG | + | chr3_2:82521677-82521696 | None:intergenic | 30.0% |
| CATAGATCAAATCAACAGAA+AGG | + | chr3_2:82521833-82521852 | None:intergenic | 30.0% | |
| AAAACCGAACAATAGGTATA+TGG | + | chr3_2:82521964-82521983 | None:intergenic | 30.0% | |
| AGTAACAAAAACCGAACAAT+AGG | + | chr3_2:82521971-82521990 | None:intergenic | 30.0% | |
| ! | TCTGATCTTTTGTCTTTATC+TGG | - | chr3_2:82522197-82522216 | Msa0430620:intron | 30.0% |
| ATTCTCAGTATTTAATGGCT+AGG | - | chr3_2:82522338-82522357 | Msa0430620:intron | 30.0% | |
| !!! | ATACATGATACTGGTTTTGA+AGG | + | chr3_2:82522392-82522411 | None:intergenic | 30.0% |
| ! | CATTGTTTCGCTGAATTTTA+AGG | - | chr3_2:82522675-82522694 | Msa0430620:intron | 30.0% |
| GAGTCATAAACATTTGATGT+AGG | + | chr3_2:82522981-82523000 | None:intergenic | 30.0% | |
| GTTGTTAATGTTTATCCTTC+TGG | - | chr3_2:82523013-82523032 | Msa0430620:intron | 30.0% | |
| ATAAGACTAACAAAACCAGA+AGG | + | chr3_2:82523031-82523050 | None:intergenic | 30.0% | |
| TATCGTGAATTTCTTACTTC+TGG | + | chr3_2:82523360-82523379 | None:intergenic | 30.0% | |
| AGAAGTAAGAAATTCACGAT+AGG | - | chr3_2:82523359-82523378 | Msa0430620:intron | 30.0% | |
| GAAATTCTTAAGAGTGGATC+GGG | - | chr3_2:82520982-82521001 | Msa0430620:three_prime_UTR | 35.0% | |
| AGCGTGAATTAGATAGAGAT+TGG | + | chr3_2:82521253-82521272 | None:intergenic | 35.0% | |
| !!! | TAGTTGTTTTTTCTCGGTAG+AGG | - | chr3_2:82521509-82521528 | Msa0430620:intron | 35.0% |
| GATCAATAAGAGCTGAGAAT+TGG | - | chr3_2:82521577-82521596 | Msa0430620:intron | 35.0% | |
| AATCAAAACTCGAAGCCTAT+GGG | + | chr3_2:82521737-82521756 | None:intergenic | 35.0% | |
| TGATACTCAGAAATAACGCA+GGG | + | chr3_2:82521916-82521935 | None:intergenic | 35.0% | |
| TTGATACTCAGAAATAACGC+AGG | + | chr3_2:82521917-82521936 | None:intergenic | 35.0% | |
| ! | GGTGCATTGCATTATTTTCT+AGG | + | chr3_2:82521943-82521962 | None:intergenic | 35.0% |
| TGCACCATATACCTATTGTT+CGG | - | chr3_2:82521957-82521976 | Msa0430620:intron | 35.0% | |
| ! | GGTGCATTGCATTATTTTCT+AGG | + | chr3_2:82521943-82521962 | None:intergenic | 35.0% |
| AATAAGAAAAGTGACGAGAG+CGG | + | chr3_2:82522160-82522179 | None:intergenic | 35.0% | |
| !! | CTAGGCTTGCTATATGATAT+GGG | - | chr3_2:82522356-82522375 | Msa0430620:intron | 35.0% |
| TATATGTTGCCTTGATGTAG+AGG | + | chr3_2:82522428-82522447 | None:intergenic | 35.0% | |
| CTACATCAAGGCAACATATA+TGG | - | chr3_2:82522428-82522447 | Msa0430620:intron | 35.0% | |
| TGGTTGACAACAATATTAGG+TGG | - | chr3_2:82522448-82522467 | Msa0430620:intron | 35.0% | |
| TCCAATGTGATTCCCAATAT+AGG | - | chr3_2:82522528-82522547 | Msa0430620:intron | 35.0% | |
| CCAATGTGATTCCCAATATA+GGG | - | chr3_2:82522529-82522548 | Msa0430620:intron | 35.0% | |
| !! | TGTTTCGCTGAATTTTAAGG+TGG | - | chr3_2:82522678-82522697 | Msa0430620:intron | 35.0% |
| !!! | GTTTCGCTGAATTTTAAGGT+GGG | - | chr3_2:82522679-82522698 | Msa0430620:intron | 35.0% |
| ACTTTGACAGTGATGGTTAT+GGG | - | chr3_2:82522755-82522774 | Msa0430620:intron | 35.0% | |
| TCAATCATGCTGGATGTTAT+GGG | + | chr3_2:82522834-82522853 | None:intergenic | 35.0% | |
| GGGTCCATTATTAGATTTGA+TGG | - | chr3_2:82522888-82522907 | Msa0430620:intron | 35.0% | |
| !! | TCTATGATGGACACCATAAT+AGG | + | chr3_2:82522952-82522971 | None:intergenic | 35.0% |
| ATGTAGGACAATGTCTATGA+TGG | + | chr3_2:82522965-82522984 | None:intergenic | 35.0% | |
| CATTAACAACCAAGTCACTA+CGG | + | chr3_2:82523003-82523022 | None:intergenic | 35.0% | |
| !! | AGTCATTTTGTGGTTACAGT+GGG | + | chr3_2:82523123-82523142 | None:intergenic | 35.0% |
| !! | TAGTCATTTTGTGGTTACAG+TGG | + | chr3_2:82523124-82523143 | None:intergenic | 35.0% |
| !! | GCTCAATTTCATTTTGAAGG+TGG | - | chr3_2:82523192-82523211 | Msa0430620:intron | 35.0% |
| !! | CAATTTCATTTTGAAGGTGG+AGG | - | chr3_2:82523195-82523214 | Msa0430620:intron | 35.0% |
| TTGTCAAGGATCACATTTCA+AGG | - | chr3_2:82523279-82523298 | Msa0430620:intron | 35.0% | |
| ! | AGGAGTGGAATTTGATAGTA+AGG | - | chr3_2:82523299-82523318 | Msa0430620:intron | 35.0% |
| TAAGGAGAAAAGTGATAGCA+TGG | - | chr3_2:82523317-82523336 | Msa0430620:CDS | 35.0% | |
| TGAATTTCTTACTTCTGGAC+TGG | + | chr3_2:82523355-82523374 | None:intergenic | 35.0% | |
| ! | TTCATGTTATTTGTGTCCGT+AGG | + | chr3_2:82523469-82523488 | None:intergenic | 35.0% |
| ACACAAATAACATGAAGCCT+GGG | - | chr3_2:82523473-82523492 | Msa0430620:exon | 35.0% | |
| !!! | GAATGGTACTGTTATTTTGC+TGG | - | chr3_2:82523572-82523591 | Msa0430620:five_prime_UTR | 35.0% |
| ATCACAAATTTCAACGGTGC+CGG | - | chr3_2:82521165-82521184 | Msa0430620:three_prime_UTR | 40.0% | |
| TAGAGATTGGAGAAGGTGAA+TGG | + | chr3_2:82521240-82521259 | None:intergenic | 40.0% | |
| TTTAGGCTGCAATTTGACGT+TGG | - | chr3_2:82521373-82521392 | Msa0430620:CDS | 40.0% | |
| !!! | TGTTTTTTCTCGGTAGAGGA+TGG | - | chr3_2:82521513-82521532 | Msa0430620:intron | 40.0% |
| GAATCTAGAAAGCAGGAGTA+TGG | + | chr3_2:82521626-82521645 | None:intergenic | 40.0% | |
| TGAGAAGCCGGATGAATAAT+AGG | + | chr3_2:82521648-82521667 | None:intergenic | 40.0% | |
| ! | ACATGGTTTCTTTGAGAAGC+CGG | + | chr3_2:82521660-82521679 | None:intergenic | 40.0% |
| GAATCAAAACTCGAAGCCTA+TGG | + | chr3_2:82521738-82521757 | None:intergenic | 40.0% | |
| CTTACTGTGAAGTGATTGCT+TGG | - | chr3_2:82521801-82521820 | Msa0430620:intron | 40.0% | |
| ATAAGAAAAGTGACGAGAGC+GGG | + | chr3_2:82522159-82522178 | None:intergenic | 40.0% | |
| TTTGTCTTTATCTGGTGCAC+AGG | - | chr3_2:82522205-82522224 | Msa0430620:intron | 40.0% | |
| AGGTATGCCATTGAACTTCT+TGG | - | chr3_2:82522225-82522244 | Msa0430620:intron | 40.0% | |
| GGTATGCCATTGAACTTCTT+GGG | - | chr3_2:82522226-82522245 | Msa0430620:intron | 40.0% | |
| !! | GCTAGGCTTGCTATATGATA+TGG | - | chr3_2:82522355-82522374 | Msa0430620:intron | 40.0% |
| ! | ATTTCTAGGCCTCTACATCA+AGG | - | chr3_2:82522416-82522435 | Msa0430620:intron | 40.0% |
| AGAGTTATGCATAACCCCAA+CGG | - | chr3_2:82522492-82522511 | Msa0430620:intron | 40.0% | |
| CCCTATATTGGGAATCACAT+TGG | + | chr3_2:82522532-82522551 | None:intergenic | 40.0% | |
| !! | CTGATTTGGGACCCTATATT+GGG | + | chr3_2:82522543-82522562 | None:intergenic | 40.0% |
| AATCGTCAAGTGCCTGATTT+GGG | + | chr3_2:82522556-82522575 | None:intergenic | 40.0% | |
| !!! | TGAATTTTAAGGTGGGTGGA+GGG | - | chr3_2:82522686-82522705 | Msa0430620:intron | 40.0% |
| ATTGTGAGAGAATCCCAACT+GGG | - | chr3_2:82522719-82522738 | Msa0430620:intron | 40.0% | |
| TAACCATCACTGTCAAAGTG+CGG | + | chr3_2:82522754-82522773 | None:intergenic | 40.0% | |
| CACTTTGACAGTGATGGTTA+TGG | - | chr3_2:82522754-82522773 | Msa0430620:intron | 40.0% | |
| CTCAATCATGCTGGATGTTA+TGG | + | chr3_2:82522835-82522854 | None:intergenic | 40.0% | |
| ATCCAGCATGATTGAGAGAA+TGG | - | chr3_2:82522839-82522858 | Msa0430620:intron | 40.0% | |
| GATGGAATTGCAAGATCTAG+TGG | - | chr3_2:82522906-82522925 | Msa0430620:intron | 40.0% | |
| TTTATGACTCCGTAGTGACT+TGG | - | chr3_2:82522991-82523010 | Msa0430620:intron | 40.0% | |
| TAGGTTTCCTTAATTCCCCT+AGG | - | chr3_2:82523094-82523113 | Msa0430620:intron | 40.0% | |
| ! | TCATTTTGTGGTTACAGTGG+GGG | + | chr3_2:82523121-82523140 | None:intergenic | 40.0% |
| !! | GTCATTTTGTGGTTACAGTG+GGG | + | chr3_2:82523122-82523141 | None:intergenic | 40.0% |
| AAGGATCACATTTCAAGGAG+TGG | - | chr3_2:82523284-82523303 | Msa0430620:intron | 40.0% | |
| AGATTGCTACCACCTATTAC+TGG | - | chr3_2:82523412-82523431 | Msa0430620:intron | 40.0% | |
| TATTTGTGTCCGTAGGCATA+GGG | + | chr3_2:82523462-82523481 | None:intergenic | 40.0% | |
| TTATTTGTGTCCGTAGGCAT+AGG | + | chr3_2:82523463-82523482 | None:intergenic | 40.0% | |
| GACACAAATAACATGAAGCC+TGG | - | chr3_2:82523472-82523491 | Msa0430620:exon | 40.0% | |
| CACAAATAACATGAAGCCTG+GGG | - | chr3_2:82523474-82523493 | Msa0430620:exon | 40.0% | |
| CAAGATTTGTATATCTCCCC+AGG | + | chr3_2:82523493-82523512 | None:intergenic | 40.0% | |
| TTAAGAGTGGATCGGGTCTT+GGG | - | chr3_2:82520989-82521008 | Msa0430620:three_prime_UTR | 45.0% | |
| TGTGTGTGGACGGTAGAATT+TGG | + | chr3_2:82521028-82521047 | None:intergenic | 45.0% | |
| TCTACTCTAGTGTGTGTGGA+CGG | + | chr3_2:82521038-82521057 | None:intergenic | 45.0% | |
| ACAGTCTACTCTAGTGTGTG+TGG | + | chr3_2:82521042-82521061 | None:intergenic | 45.0% | |
| TTGCATACCAAATCCGATGC+CGG | + | chr3_2:82521187-82521206 | None:intergenic | 45.0% | |
| !! | TCTTTTGCAGGTTTCGGTGT+TGG | - | chr3_2:82521282-82521301 | Msa0430620:CDS | 45.0% |
| TAAGAAAAGTGACGAGAGCG+GGG | + | chr3_2:82522158-82522177 | None:intergenic | 45.0% | |
| CCAAGACCCAAGAAGTTCAA+TGG | + | chr3_2:82522235-82522254 | None:intergenic | 45.0% | |
| CCATTGAACTTCTTGGGTCT+TGG | - | chr3_2:82522232-82522251 | Msa0430620:intron | 45.0% | |
| ACTCTAATAACACGCCGTTG+GGG | + | chr3_2:82522509-82522528 | None:intergenic | 45.0% | |
| GACTCTAATAACACGCCGTT+GGG | + | chr3_2:82522510-82522529 | None:intergenic | 45.0% | |
| !! | CCTGATTTGGGACCCTATAT+TGG | + | chr3_2:82522544-82522563 | None:intergenic | 45.0% |
| CCAATATAGGGTCCCAAATC+AGG | - | chr3_2:82522541-82522560 | Msa0430620:intron | 45.0% | |
| CAATCGTCAAGTGCCTGATT+TGG | + | chr3_2:82522557-82522576 | None:intergenic | 45.0% | |
| CAAATCAGGCACTTGACGAT+TGG | - | chr3_2:82522555-82522574 | Msa0430620:intron | 45.0% | |
| AAATACCGGAGAACAAGCGT+TGG | + | chr3_2:82522607-82522626 | None:intergenic | 45.0% | |
| TCTTGTACTTCAACGTCGTG+TGG | - | chr3_2:82522637-82522656 | Msa0430620:intron | 45.0% | |
| CTTGTACTTCAACGTCGTGT+GGG | - | chr3_2:82522638-82522657 | Msa0430620:intron | 45.0% | |
| TTGTACTTCAACGTCGTGTG+GGG | - | chr3_2:82522639-82522658 | Msa0430620:intron | 45.0% | |
| !!! | TCGCTGAATTTTAAGGTGGG+TGG | - | chr3_2:82522682-82522701 | Msa0430620:intron | 45.0% |
| !!! | CTGAATTTTAAGGTGGGTGG+AGG | - | chr3_2:82522685-82522704 | Msa0430620:intron | 45.0% |
| GGATTCTCTCACAATGGAAC+CGG | + | chr3_2:82522714-82522733 | None:intergenic | 45.0% | |
| CAGTTGGGATTCTCTCACAA+TGG | + | chr3_2:82522720-82522739 | None:intergenic | 45.0% | |
| CATTGTGAGAGAATCCCAAC+TGG | - | chr3_2:82522718-82522737 | Msa0430620:intron | 45.0% | |
| GACAGTGATGGTTATGGGAT+TGG | - | chr3_2:82522760-82522779 | Msa0430620:intron | 45.0% | |
| AGTGATGGTTATGGGATTGG+AGG | - | chr3_2:82522763-82522782 | Msa0430620:intron | 45.0% | |
| GTTATGGGATTGGAGGAAAC+AGG | - | chr3_2:82522770-82522789 | Msa0430620:intron | 45.0% | |
| ! | GAAACAGGAACGGTACTGAA+TGG | - | chr3_2:82522785-82522804 | Msa0430620:intron | 45.0% |
| CTCCATTCTCTCAATCATGC+TGG | + | chr3_2:82522844-82522863 | None:intergenic | 45.0% | |
| CAGCATGATTGAGAGAATGG+AGG | - | chr3_2:82522842-82522861 | Msa0430620:intron | 45.0% | |
| ! | CATTTTGTGGTTACAGTGGG+GGG | + | chr3_2:82523120-82523139 | None:intergenic | 45.0% |
| !! | TGGGGTTTTGGTACTGCTTA+TGG | - | chr3_2:82523243-82523262 | Msa0430620:intron | 45.0% |
| TTGGTACTGCTTATGGTAGC+AGG | - | chr3_2:82523250-82523269 | Msa0430620:intron | 45.0% | |
| CTGCTTATGGTAGCAGGTAT+CGG | - | chr3_2:82523256-82523275 | Msa0430620:intron | 45.0% | |
| TGCTACCACCTATTACTGGT+CGG | - | chr3_2:82523416-82523435 | Msa0430620:intron | 45.0% | |
| CTTAAGAGTGGATCGGGTCT+TGG | - | chr3_2:82520988-82521007 | Msa0430620:three_prime_UTR | 50.0% | |
| TGGACGGTAGAATTTGGACC+CGG | + | chr3_2:82521022-82521041 | None:intergenic | 50.0% | |
| !! | AATTTCAACGGTGCCGGCAT+CGG | - | chr3_2:82521171-82521190 | Msa0430620:three_prime_UTR | 50.0% |
| !! | TTCGGTGTTGGTTGCGGTTT+CGG | - | chr3_2:82521294-82521313 | Msa0430620:CDS | 50.0% |
| !! | TTGCGGTTTCGGTGTTGGAT+GGG | - | chr3_2:82521305-82521324 | Msa0430620:CDS | 50.0% |
| !! | TTCGGTGTTGGATGGGGTTT+CGG | - | chr3_2:82521312-82521331 | Msa0430620:CDS | 50.0% |
| TCTCGGTAGAGGATGGAAAG+TGG | - | chr3_2:82521520-82521539 | Msa0430620:intron | 50.0% | |
| CTCGGTAGAGGATGGAAAGT+GGG | - | chr3_2:82521521-82521540 | Msa0430620:intron | 50.0% | |
| ! | AACTTCTTGGGTCTTGGTGC+AGG | - | chr3_2:82522238-82522257 | Msa0430620:intron | 50.0% |
| GGACTCTAATAACACGCCGT+TGG | + | chr3_2:82522511-82522530 | None:intergenic | 50.0% | |
| TCACCGCACTTTGACAGTGA+TGG | - | chr3_2:82522748-82522767 | Msa0430620:intron | 50.0% | |
| GGGATTGGAGGAAACAGGAA+CGG | - | chr3_2:82522775-82522794 | Msa0430620:intron | 50.0% | |
| !! | CATTTTGAAGGTGGAGGCTG+TGG | - | chr3_2:82523201-82523220 | Msa0430620:intron | 50.0% |
| !! | GTAGCAGGTATCGGTTGTCA+AGG | - | chr3_2:82523265-82523284 | Msa0430620:intron | 50.0% |
| !! | GCAGGTTTCGGTGTTGGTTG+CGG | - | chr3_2:82521288-82521307 | Msa0430620:CDS | 55.0% |
| ! | GTTGGTTGCGGTTTCGGTGT+TGG | - | chr3_2:82521300-82521319 | Msa0430620:CDS | 55.0% |
| !! | GTTGCGGTTTCGGTGTTGGA+TGG | - | chr3_2:82521304-82521323 | Msa0430620:CDS | 55.0% |
| !! | TGCGGTTTCGGTGTTGGATG+GGG | - | chr3_2:82521306-82521325 | Msa0430620:CDS | 55.0% |
| GGTAGAGGATGGAAAGTGGG+TGG | - | chr3_2:82521524-82521543 | Msa0430620:intron | 55.0% | |
| AAAAGTGACGAGAGCGGGGT+GGG | + | chr3_2:82522154-82522173 | None:intergenic | 55.0% | |
| GCGTTCCAACGCTTGTTCTC+CGG | - | chr3_2:82522599-82522618 | Msa0430620:intron | 55.0% | |
| ACGTCGTGTGGGGAGCAAAA+TGG | - | chr3_2:82522649-82522668 | Msa0430620:intron | 55.0% | |
| TTAAGGTGGGTGGAGGGTTC+CGG | - | chr3_2:82522692-82522711 | Msa0430620:intron | 55.0% | |
| GCGGTGAAGCAAACCCAGTT+GGG | + | chr3_2:82522735-82522754 | None:intergenic | 55.0% | |
| TGCGGTGAAGCAAACCCAGT+TGG | + | chr3_2:82522736-82522755 | None:intergenic | 55.0% | |
| ! | CAGGAACGGTACTGAATGGC+TGG | - | chr3_2:82522789-82522808 | Msa0430620:intron | 55.0% |
| ! | CGTTGGAGTGGGACTTGGTT+GGG | - | chr3_2:82523224-82523243 | Msa0430620:intron | 55.0% |
| ! | GTTGGAGTGGGACTTGGTTG+GGG | - | chr3_2:82523225-82523244 | Msa0430620:intron | 55.0% |
| !! | GTGGGACTTGGTTGGGGTTT+TGG | - | chr3_2:82523231-82523250 | Msa0430620:intron | 55.0% |
| CATGGCCGACCAGTAATAGG+TGG | + | chr3_2:82523424-82523443 | None:intergenic | 55.0% | |
| GCTCATGGCCGACCAGTAAT+AGG | + | chr3_2:82523427-82523446 | None:intergenic | 55.0% | |
| ATTACTGGTCGGCCATGAGC+AGG | - | chr3_2:82523427-82523446 | Msa0430620:intron | 55.0% | |
| TTACTGGTCGGCCATGAGCA+GGG | - | chr3_2:82523428-82523447 | Msa0430620:intron | 55.0% | |
| GTTGCATGGCCCTATGCCTA+CGG | - | chr3_2:82523450-82523469 | Msa0430620:CDS | 55.0% | |
| TCGGGTCTTGGGTCGAGATC+CGG | - | chr3_2:82521000-82521019 | Msa0430620:three_prime_UTR | 60.0% | |
| !! | AACGGTGCCGGCATCGGATT+TGG | - | chr3_2:82521177-82521196 | Msa0430620:three_prime_UTR | 60.0% |
| ! | GGTGTTGGATGGGGTTTCGG+AGG | - | chr3_2:82521315-82521334 | Msa0430620:CDS | 60.0% |
| AAAGTGACGAGAGCGGGGTG+GGG | + | chr3_2:82522153-82522172 | None:intergenic | 60.0% | |
| GAAAAGTGACGAGAGCGGGG+TGG | + | chr3_2:82522155-82522174 | None:intergenic | 60.0% | |
| TGGGGGGCCTAGGGGAATTA+AGG | + | chr3_2:82523104-82523123 | None:intergenic | 60.0% | |
| TGGTTACAGTGGGGGGCCTA+GGG | + | chr3_2:82523113-82523132 | None:intergenic | 60.0% | |
| ! | TGTGGCGTTGGAGTGGGACT+TGG | - | chr3_2:82523219-82523238 | Msa0430620:intron | 60.0% |
| ! | GCGTTGGAGTGGGACTTGGT+TGG | - | chr3_2:82523223-82523242 | Msa0430620:intron | 60.0% |
| CGGGTCTTGGGTCGAGATCC+GGG | - | chr3_2:82521001-82521020 | Msa0430620:three_prime_UTR | 65.0% | |
| GTGGGGGGGAGGAGCTAACT+TGG | + | chr3_2:82522119-82522138 | None:intergenic | 65.0% | |
| GGTTACAGTGGGGGGCCTAG+GGG | + | chr3_2:82523112-82523131 | None:intergenic | 65.0% | |
| GTGGTTACAGTGGGGGGCCT+AGG | + | chr3_2:82523114-82523133 | None:intergenic | 65.0% | |
| GAAGGTGGAGGCTGTGGCGT+TGG | - | chr3_2:82523207-82523226 | Msa0430620:intron | 65.0% | |
| ! | TGGAGGCTGTGGCGTTGGAG+TGG | - | chr3_2:82523212-82523231 | Msa0430620:intron | 65.0% |
| ! | GGAGGCTGTGGCGTTGGAGT+GGG | - | chr3_2:82523213-82523232 | Msa0430620:intron | 65.0% |
| CGGCCATGAGCAGGGTTGCA+TGG | - | chr3_2:82523436-82523455 | Msa0430620:intron | 65.0% | |
| GGGCCATGCAACCCTGCTCA+TGG | + | chr3_2:82523442-82523461 | None:intergenic | 65.0% | |
| TGGGGTGCAGGTGGGGGTGG+GGG | + | chr3_2:82522135-82522154 | None:intergenic | 75.0% | |
| GTGGGGTGCAGGTGGGGGTG+GGG | + | chr3_2:82522136-82522155 | None:intergenic | 75.0% | |
| GGTGGGGTGCAGGTGGGGGT+GGG | + | chr3_2:82522137-82522156 | None:intergenic | 75.0% | |
| AGCGGGGTGGGGTGCAGGTG+GGG | + | chr3_2:82522142-82522161 | None:intergenic | 75.0% | |
| GAGCGGGGTGGGGTGCAGGT+GGG | + | chr3_2:82522143-82522162 | None:intergenic | 75.0% | |
| AGAGCGGGGTGGGGTGCAGG+TGG | + | chr3_2:82522144-82522163 | None:intergenic | 75.0% | |
| ACGAGAGCGGGGTGGGGTGC+AGG | + | chr3_2:82522147-82522166 | None:intergenic | 75.0% | |
| ! | TGCAGGTGGGGGTGGGGGGG+AGG | + | chr3_2:82522130-82522149 | None:intergenic | 80.0% |
| ! | GGGTGCAGGTGGGGGTGGGG+GGG | + | chr3_2:82522133-82522152 | None:intergenic | 80.0% |
| ! | GGGGTGCAGGTGGGGGTGGG+GGG | + | chr3_2:82522134-82522153 | None:intergenic | 80.0% |
| ! | GGGTGGGGTGCAGGTGGGGG+TGG | + | chr3_2:82522138-82522157 | None:intergenic | 80.0% |
| ! | GCGGGGTGGGGTGCAGGTGG+GGG | + | chr3_2:82522141-82522160 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 82520981 | 82523661 | 82520981 | ID=Msa0430620;Name=Msa0430620 |
| chr3_2 | mRNA | 82520981 | 82523661 | 82520981 | ID=Msa0430620-mRNA-1;Parent=Msa0430620;Name=Msa0430620-mRNA-1;_AED=0.00;_eAED=0.00;_QI=178|1|1|1|0.66|1|4|281|95 |
| chr3_2 | exon | 82520981 | 82521431 | 82520981 | ID=Msa0430620-mRNA-1:exon:22911;Parent=Msa0430620-mRNA-1 |
| chr3_2 | exon | 82522383 | 82522415 | 82522383 | ID=Msa0430620-mRNA-1:exon:22910;Parent=Msa0430620-mRNA-1 |
| chr3_2 | exon | 82523306 | 82523350 | 82523306 | ID=Msa0430620-mRNA-1:exon:22909;Parent=Msa0430620-mRNA-1 |
| chr3_2 | exon | 82523444 | 82523661 | 82523444 | ID=Msa0430620-mRNA-1:exon:22908;Parent=Msa0430620-mRNA-1 |
| chr3_2 | five_prime_UTR | 82523484 | 82523661 | 82523484 | ID=Msa0430620-mRNA-1:five_prime_utr;Parent=Msa0430620-mRNA-1 |
| chr3_2 | CDS | 82523444 | 82523483 | 82523444 | ID=Msa0430620-mRNA-1:cds;Parent=Msa0430620-mRNA-1 |
| chr3_2 | CDS | 82523306 | 82523350 | 82523306 | ID=Msa0430620-mRNA-1:cds;Parent=Msa0430620-mRNA-1 |
| chr3_2 | CDS | 82522383 | 82522415 | 82522383 | ID=Msa0430620-mRNA-1:cds;Parent=Msa0430620-mRNA-1 |
| chr3_2 | CDS | 82521262 | 82521431 | 82521262 | ID=Msa0430620-mRNA-1:cds;Parent=Msa0430620-mRNA-1 |
| chr3_2 | three_prime_UTR | 82520981 | 82521261 | 82520981 | ID=Msa0430620-mRNA-1:three_prime_utr;Parent=Msa0430620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
