Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339920 | XP_003597410.1 | 83.776 | 339 | 23 | 6 | 1 | 325 | 1 | 321 | 0.0 | 542 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339920 | Q2HS22 | 83.776 | 339 | 23 | 6 | 1 | 325 | 1 | 321 | 0.0 | 542 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036790 | Msa0339920 | 0.807376 | 5.208919e-50 | -8.615850e-47 |
| Msa0132000 | Msa0339920 | 0.810300 | 1.234638e-50 | -8.615850e-47 |
| Msa0167570 | Msa0339920 | -0.805231 | 1.475141e-49 | -8.615850e-47 |
| Msa0198470 | Msa0339920 | 0.942352 | 8.365474e-102 | -8.615850e-47 |
| Msa0302560 | Msa0339920 | 0.946185 | 7.466488e-105 | -8.615850e-47 |
| Msa0339920 | Msa0345050 | 0.818941 | 1.506902e-52 | -8.615850e-47 |
| Msa0339920 | Msa0348520 | 0.800471 | 1.419165e-48 | -8.615850e-47 |
| Msa0339920 | Msa0355550 | 0.854460 | 1.213310e-61 | -8.615850e-47 |
| Msa0339920 | Msa0497120 | 0.819986 | 8.704648e-53 | -8.615850e-47 |
| Msa0339920 | Msa0567120 | 0.802993 | 4.308631e-49 | -8.615850e-47 |
| Msa0339920 | Msa0658580 | 0.807901 | 4.030813e-50 | -8.615850e-47 |
| Msa0339920 | Msa0703540 | 0.814173 | 1.762779e-51 | -8.615850e-47 |
| Msa0339920 | Msa0784780 | -0.800880 | 1.171077e-48 | -8.615850e-47 |
| Msa0339920 | Msa0858250 | -0.801664 | 8.094437e-49 | -8.615850e-47 |
| Msa0339920 | Msa0984730 | 0.812182 | 4.822841e-51 | -8.615850e-47 |
| Msa0339920 | Msa1116750 | 0.800991 | 1.111605e-48 | -8.615850e-47 |
| Msa0339920 | Msa1136760 | 0.806142 | 9.496551e-50 | -8.615850e-47 |
| Msa0339920 | Msa1137210 | 0.831720 | 1.422552e-55 | -8.615850e-47 |
| Msa0339920 | Msa1162870 | 0.814977 | 1.170152e-51 | -8.615850e-47 |
| Msa0339920 | Msa1202800 | 0.802481 | 5.495491e-49 | -8.615850e-47 |
| Msa0339920 | Msa1255210 | 0.808579 | 2.889709e-50 | -8.615850e-47 |
| Msa0339920 | Msa1256060 | 0.802076 | 6.659742e-49 | -8.615850e-47 |
| Msa0339920 | Msa1389170 | 0.817303 | 3.536648e-52 | -8.615850e-47 |
| Msa0339920 | Msa1457480 | 0.804181 | 2.443419e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339920 | MtrunA17_Chr2g0328681 | 83.776 | 339 | 23 | 6 | 1 | 325 | 1 | 321 | 0.0 | 542 |
| Msa0339920 | MtrunA17_Chr4g0032271 | 35.494 | 324 | 167 | 8 | 25 | 325 | 73 | 377 | 7.39e-48 | 165 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339920 | AT5G59050.1 | 33.033 | 333 | 119 | 15 | 25 | 325 | 52 | 312 | 4.62e-19 | 86.7 |
| Msa0339920 | AT5G59050.4 | 37.688 | 199 | 72 | 11 | 159 | 325 | 13 | 191 | 7.80e-12 | 63.9 |
Find 88 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTACGCTAACGTGGTTAA+AGG | 0.245389 | 2_4:+61193638 | Msa0339920:CDS |
| AAATTAAAGCCATTGAATTA+AGG | 0.289984 | 2_4:+61193789 | Msa0339920:CDS |
| TTTACTTTATTTCATTAGTT+TGG | 0.293030 | 2_4:-61197267 | None:intergenic |
| GCACAACTCTTGCTGGTATA+AGG | 0.306651 | 2_4:-61195351 | None:intergenic |
| TGAAATAAAGTAAACAAATA+AGG | 0.315189 | 2_4:+61197276 | Msa0339920:three_prime_UTR |
| CTTAATCATCATTATAATAA+TGG | 0.331007 | 2_4:+61197203 | Msa0339920:three_prime_UTR |
| AATGAATAAGAAACCATAAA+AGG | 0.347594 | 2_4:+61197301 | Msa0339920:three_prime_UTR |
| GATTCTCTAATGCATATTCA+TGG | 0.382088 | 2_4:-61197347 | None:intergenic |
| CCTACGCTAACGTGGTTAAA+GGG | 0.390281 | 2_4:+61193639 | Msa0339920:CDS |
| TGATGAAAATCTATCAATAT+TGG | 0.390503 | 2_4:-61193744 | None:intergenic |
| AAAGCCTGCACAACTCTTGC+TGG | 0.391708 | 2_4:-61195358 | None:intergenic |
| ACCTGTCCCACTTCTTGAAC+CGG | 0.402912 | 2_4:-61193963 | None:intergenic |
| CTCCGCCAGCTACACCTTGT+TGG | 0.404982 | 2_4:+61193606 | Msa0339920:CDS |
| GGAGGGACGCCAACAACTTT+GGG | 0.411943 | 2_4:-61195406 | None:intergenic |
| GAGGCAGAATCATATCATTC+TGG | 0.418235 | 2_4:-61197090 | None:intergenic |
| TATTCATGGATCTAATTTGT+TGG | 0.434148 | 2_4:-61197333 | None:intergenic |
| GTCTTCCAACAAGGTGTAGC+TGG | 0.435910 | 2_4:-61193611 | None:intergenic |
| TGGAGGGACGCCAACAACTT+TGG | 0.438518 | 2_4:-61195407 | None:intergenic |
| AAGGAAGCGCGTAGATAGTA+AGG | 0.439344 | 2_4:-61193414 | None:intergenic |
| GCAACTACACTTTGACAAAA+CGG | 0.470788 | 2_4:+61195381 | Msa0339920:CDS |
| CTGTCTCAGAAGCAAGGTAA+TGG | 0.472108 | 2_4:+61193845 | Msa0339920:CDS |
| CCACTGGTCTGCAATGGAGC+AGG | 0.476520 | 2_4:-61193905 | None:intergenic |
| GTTATTCAATAAACCTGAAA+AGG | 0.476812 | 2_4:-61193433 | None:intergenic |
| CCAGTTCGGAATTGTGACTC+TGG | 0.478083 | 2_4:-61193378 | None:intergenic |
| ATATGATTCTGCCTCAAGAA+TGG | 0.490516 | 2_4:+61197098 | Msa0339920:CDS |
| TGTACCCCTCTGTCACGACT+TGG | 0.490937 | 2_4:-61197475 | None:intergenic |
| ATGACCCTTCTGAGCTCCCT+TGG | 0.499706 | 2_4:-61193571 | None:intergenic |
| TATACCAGCAAGAGTTGTGC+AGG | 0.500359 | 2_4:+61195354 | Msa0339920:CDS |
| GCTCCATTGCAGACCAGTGG+TGG | 0.500459 | 2_4:+61193908 | Msa0339920:CDS |
| CTGCATCATTCCTCCACCAC+TGG | 0.505752 | 2_4:-61193921 | None:intergenic |
| GTGGGATTTAATTAGTTCAC+CGG | 0.508002 | 2_4:+61193517 | Msa0339920:CDS |
| TGTAACCAAGGGAGCTCAGA+AGG | 0.515050 | 2_4:+61193566 | Msa0339920:CDS |
| CCAGAGTCACAATTCCGAAC+TGG | 0.519755 | 2_4:+61193378 | Msa0339920:CDS |
| TCCGGTTCAAGAAGTGGGAC+AGG | 0.522917 | 2_4:+61193962 | Msa0339920:CDS |
| CCTCCACCACTGGTCTGCAA+TGG | 0.524420 | 2_4:-61193911 | None:intergenic |
| ATCACACAAAGCATTGATTG+AGG | 0.524445 | 2_4:+61193763 | Msa0339920:CDS |
| TGAAAATCTATCAATATTGG+AGG | 0.528441 | 2_4:-61193741 | None:intergenic |
| CCATTGCAGACCAGTGGTGG+AGG | 0.531905 | 2_4:+61193911 | Msa0339920:CDS |
| AAAACGGCTCCCAAAGTTGT+TGG | 0.534159 | 2_4:+61195397 | Msa0339920:CDS |
| GGTGGGTCCGGTTCAAGAAG+TGG | 0.535246 | 2_4:+61193956 | Msa0339920:CDS |
| GTGAAAACATACCTTCCCTA+TGG | 0.540528 | 2_4:-61197030 | None:intergenic |
| CACCATGGTTCCAACGGACG+AGG | 0.546751 | 2_4:+61193267 | Msa0339920:CDS |
| GGAAACATATGGTACCAGTT+CGG | 0.547360 | 2_4:-61193392 | None:intergenic |
| ATCCTCGTCCGTTGGAACCA+TGG | 0.552840 | 2_4:-61193269 | None:intergenic |
| TAGATAGTAAGGGAAACATA+TGG | 0.555742 | 2_4:-61193403 | None:intergenic |
| CTCCCTTGGTTACAACTCAC+CGG | 0.562393 | 2_4:-61193557 | None:intergenic |
| CAGTTCGGAATTGTGACTCT+GGG | 0.562437 | 2_4:-61193377 | None:intergenic |
| CAGTGGTGGAGGAATGATGC+AGG | 0.565231 | 2_4:+61193922 | Msa0339920:CDS |
| GCGACTTCTAAACAGAATCA+TGG | 0.566085 | 2_4:+61193695 | Msa0339920:CDS |
| GAATGGTACCACGGAGTGGA+GGG | 0.567764 | 2_4:-61195423 | None:intergenic |
| CTTCAATATGTCCATTCTTG+AGG | 0.572811 | 2_4:-61197109 | None:intergenic |
| TTGTCCCAAGTCGTGACAGA+GGG | 0.576218 | 2_4:+61197470 | Msa0339920:three_prime_UTR |
| ATGGATCTAATTTGTTGGCG+TGG | 0.577599 | 2_4:-61197328 | None:intergenic |
| CAATCACACCATGGTTCCAA+CGG | 0.579340 | 2_4:+61193261 | Msa0339920:CDS |
| GGATTCAACTCTGTGGTCAC+CGG | 0.580045 | 2_4:+61193538 | Msa0339920:CDS |
| GTGATGAAATCCTCGTCCGT+TGG | 0.582382 | 2_4:-61193277 | None:intergenic |
| GTACCCCTCTGTCACGACTT+GGG | 0.583453 | 2_4:-61197474 | None:intergenic |
| CTCAAGCTAAATCATTACAA+AGG | 0.588044 | 2_4:-61197592 | None:intergenic |
| TCTCAGAAGCAAGGTAATGG+AGG | 0.589606 | 2_4:+61193848 | Msa0339920:CDS |
| GGTGACCACAGAGTTGAATC+CGG | 0.590456 | 2_4:-61193536 | None:intergenic |
| CTACGCTAACGTGGTTAAAG+GGG | 0.595945 | 2_4:+61193640 | Msa0339920:CDS |
| GTGGGTCCGGTTCAAGAAGT+GGG | 0.596347 | 2_4:+61193957 | Msa0339920:CDS |
| AGAATGGTACCACGGAGTGG+AGG | 0.600926 | 2_4:-61195424 | None:intergenic |
| CCCTTTAACCACGTTAGCGT+AGG | 0.602141 | 2_4:-61193639 | None:intergenic |
| CTCAGAAGCAAGGTAATGGA+GGG | 0.607872 | 2_4:+61193849 | Msa0339920:CDS |
| AGACATTTGATGAGTTAACT+CGG | 0.619910 | 2_4:-61193299 | None:intergenic |
| TGATTCTGATGGAGCAACAA+CGG | 0.623497 | 2_4:-61194008 | None:intergenic |
| GGCCTTGTTAGATGAGGACG+AGG | 0.624372 | 2_4:-61193884 | None:intergenic |
| CCTGCTCCATTGCAGACCAG+TGG | 0.625104 | 2_4:+61193905 | Msa0339920:CDS |
| CACCGGTGAGTTGTAACCAA+GGG | 0.632229 | 2_4:+61193555 | Msa0339920:CDS |
| GCAACAACGGTTCCAGCACG+AGG | 0.632333 | 2_4:-61193995 | None:intergenic |
| TTCGGAATTGTGACTCTGGG+AGG | 0.633765 | 2_4:-61193374 | None:intergenic |
| TTCCAACAAGGTGTAGCTGG+CGG | 0.645177 | 2_4:-61193608 | None:intergenic |
| GGAGCAGGCCTTGTTAGATG+AGG | 0.651849 | 2_4:-61193890 | None:intergenic |
| CATGCTCTGTCTCAGAAGCA+AGG | 0.652288 | 2_4:+61193839 | Msa0339920:CDS |
| GTCCTCGTCCTCATCTAACA+AGG | 0.653193 | 2_4:+61193882 | Msa0339920:CDS |
| TTAAGAATGGTACCACGGAG+TGG | 0.655116 | 2_4:-61195427 | None:intergenic |
| GTTGTCCCAAGTCGTGACAG+AGG | 0.661655 | 2_4:+61197469 | Msa0339920:three_prime_UTR |
| GTAACCAAGGGAGCTCAGAA+GGG | 0.662619 | 2_4:+61193567 | Msa0339920:CDS |
| AGGAAGCGCGTAGATAGTAA+GGG | 0.675643 | 2_4:-61193413 | None:intergenic |
| TCTTGCTGGTATAAGGACAG+TGG | 0.678497 | 2_4:-61195344 | None:intergenic |
| GTTGGCGTCCCTCCACTCCG+TGG | 0.686225 | 2_4:+61195415 | Msa0339920:CDS |
| TGCTAACTGAGAGAACATCA+TGG | 0.694654 | 2_4:-61193234 | None:intergenic |
| AGAGTAGTGACTTTAGAACA+AGG | 0.711782 | 2_4:+61197555 | Msa0339920:three_prime_UTR |
| TCACCGGTGAGTTGTAACCA+AGG | 0.715334 | 2_4:+61193554 | Msa0339920:CDS |
| TGTCCCAAGTCGTGACAGAG+GGG | 0.721693 | 2_4:+61197471 | Msa0339920:three_prime_UTR |
| GTTCACCGGATTCAACTCTG+TGG | 0.734801 | 2_4:+61193531 | Msa0339920:CDS |
| TAGCAACAACAATCACACCA+TGG | 0.741419 | 2_4:+61193252 | Msa0339920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTAATTTAAAT+CGG | - | chr2_4:61195738-61195757 | None:intergenic | 0.0% |
| !!! | TAATTTTAAAGATATTTACA+TGG | + | chr2_4:61194234-61194253 | Msa0339920:intron | 10.0% |
| !!! | CAATTTTAATAGATTTAAAA+TGG | + | chr2_4:61194463-61194482 | Msa0339920:intron | 10.0% |
| !!! | ATATTTGATGTTTTTAAAAT+TGG | - | chr2_4:61194522-61194541 | None:intergenic | 10.0% |
| !! | CAGTTAAATATAATTAATTA+AGG | - | chr2_4:61195237-61195256 | None:intergenic | 10.0% |
| !! | TAACAATAATAAATTAAGAA+TGG | - | chr2_4:61195443-61195462 | None:intergenic | 10.0% |
| !!! | ATTTTAAATGCATATAAAAT+GGG | - | chr2_4:61195841-61195860 | None:intergenic | 10.0% |
| !!! | AATTTTAAATGCATATAAAA+TGG | - | chr2_4:61195842-61195861 | None:intergenic | 10.0% |
| !!! | ATATGCATTTAAAATTTATT+TGG | + | chr2_4:61195846-61195865 | Msa0339920:intron | 10.0% |
| !!! | TATGCATTTAAAATTTATTT+GGG | + | chr2_4:61195847-61195866 | Msa0339920:intron | 10.0% |
| !!! | CTTTCTTTTTAAAATTATTT+GGG | + | chr2_4:61195937-61195956 | Msa0339920:intron | 10.0% |
| !!! | GATAGGTTTTTTTTTTTTTA+AGG | - | chr2_4:61194976-61194995 | None:intergenic | 15.0% |
| !! | GGTAAGATTATTTATTTATT+AGG | - | chr2_4:61195540-61195559 | None:intergenic | 15.0% |
| !!! | AACAATGTTAAATCTTTTTA+AGG | + | chr2_4:61195642-61195661 | Msa0339920:intron | 15.0% |
| !!! | CCAAATAATTTTAAAAAGAA+AGG | - | chr2_4:61195939-61195958 | None:intergenic | 15.0% |
| !!! | CCTTTCTTTTTAAAATTATT+TGG | + | chr2_4:61195936-61195955 | Msa0339920:intron | 15.0% |
| !!! | ACTTAAGAGTATTTTATTTT+TGG | - | chr2_4:61195998-61196017 | None:intergenic | 15.0% |
| !! | ATTTATAAACAATTTCTACA+TGG | + | chr2_4:61196088-61196107 | Msa0339920:intron | 15.0% |
| !! | AAATTAAACAAATGTAGAAA+GGG | - | chr2_4:61196535-61196554 | None:intergenic | 15.0% |
| !! | TAAATTAAACAAATGTAGAA+AGG | - | chr2_4:61196536-61196555 | None:intergenic | 15.0% |
| !!! | ATACTTTTCTTTAGAAAAAT+TGG | + | chr2_4:61196670-61196689 | Msa0339920:intron | 15.0% |
| !!! | TTTTATATTATAGAACTAGT+TGG | - | chr2_4:61196906-61196925 | None:intergenic | 15.0% |
| !! | CTTAATCATCATTATAATAA+TGG | + | chr2_4:61197203-61197222 | Msa0339920:three_prime_UTR | 15.0% |
| !!! | TTTACTTTATTTCATTAGTT+TGG | - | chr2_4:61197270-61197289 | None:intergenic | 15.0% |
| !! | TGAAATAAAGTAAACAAATA+AGG | + | chr2_4:61197276-61197295 | Msa0339920:three_prime_UTR | 15.0% |
| !! | CATATAAAAAAACAACTTAA+GGG | - | chr2_4:61197429-61197448 | None:intergenic | 15.0% |
| !! | CAAAGAAGAGTTAATAATAT+AGG | - | chr2_4:61193471-61193490 | None:intergenic | 20.0% |
| !! | TGATGAAAATCTATCAATAT+TGG | - | chr2_4:61193747-61193766 | None:intergenic | 20.0% |
| !! | AAATTAAAGCCATTGAATTA+AGG | + | chr2_4:61193789-61193808 | Msa0339920:CDS | 20.0% |
| !!! | ATGTTTTTTCCTTAATTCAA+TGG | - | chr2_4:61193801-61193820 | None:intergenic | 20.0% |
| !!! | TTTGATGTTTTTAAAATTGG+AGG | - | chr2_4:61194519-61194538 | None:intergenic | 20.0% |
| !!! | AAATGAAAGCTTTTTTTTTG+TGG | + | chr2_4:61194714-61194733 | Msa0339920:intron | 20.0% |
| !!! | AAACGAATTTGATATTGTTT+TGG | - | chr2_4:61195260-61195279 | None:intergenic | 20.0% |
| !! | TTATATATATTGTTAGGGAA+AGG | + | chr2_4:61195316-61195335 | Msa0339920:intron | 20.0% |
| !! | AAACTTAGAGTATAAAACTT+AGG | - | chr2_4:61195968-61195987 | None:intergenic | 20.0% |
| !! | GATTGATAAGAAAATGAAAT+AGG | - | chr2_4:61196062-61196081 | None:intergenic | 20.0% |
| !!! | TGATTTGCAATTCTTAATAA+TGG | + | chr2_4:61196792-61196811 | Msa0339920:intron | 20.0% |
| !!! | TGATGATGATAATTTTGTTT+TGG | + | chr2_4:61197232-61197251 | Msa0339920:three_prime_UTR | 20.0% |
| !! | AATGAATAAGAAACCATAAA+AGG | + | chr2_4:61197301-61197320 | Msa0339920:three_prime_UTR | 20.0% |
| !! | CCATATAAAAAAACAACTTA+AGG | - | chr2_4:61197430-61197449 | None:intergenic | 20.0% |
| !!! | CCTTAAGTTGTTTTTTTATA+TGG | + | chr2_4:61197427-61197446 | Msa0339920:three_prime_UTR | 20.0% |
| ! | GTTATTCAATAAACCTGAAA+AGG | - | chr2_4:61193436-61193455 | None:intergenic | 25.0% |
| ! | TGAAAATCTATCAATATTGG+AGG | - | chr2_4:61193744-61193763 | None:intergenic | 25.0% |
| ! | CAGATTCGAATATTAAAAGT+GGG | - | chr2_4:61194135-61194154 | None:intergenic | 25.0% |
| ! | ACAGATTCGAATATTAAAAG+TGG | - | chr2_4:61194136-61194155 | None:intergenic | 25.0% |
| ! | TAACTAGATTGATGCTATTA+AGG | + | chr2_4:61194639-61194658 | Msa0339920:intron | 25.0% |
| ! | AACTAGATTGATGCTATTAA+GGG | + | chr2_4:61194640-61194659 | Msa0339920:intron | 25.0% |
| ! | GTGACCAAAAATATTCTTTA+TGG | + | chr2_4:61195040-61195059 | Msa0339920:intron | 25.0% |
| ! | ACCAAAAATATTCTTTATGG+TGG | + | chr2_4:61195043-61195062 | Msa0339920:intron | 25.0% |
| !! | ACCACCATAAAGAATATTTT+TGG | - | chr2_4:61195047-61195066 | None:intergenic | 25.0% |
| ! | AAAAATAAAACTGAACCGAA+AGG | - | chr2_4:61195132-61195151 | None:intergenic | 25.0% |
| ! | AATTAAGCAGTTAGAAAGTT+TGG | + | chr2_4:61195174-61195193 | Msa0339920:intron | 25.0% |
| ! | TGCACGTTATATATATTGTT+AGG | + | chr2_4:61195310-61195329 | Msa0339920:intron | 25.0% |
| ! | GCACGTTATATATATTGTTA+GGG | + | chr2_4:61195311-61195330 | Msa0339920:intron | 25.0% |
| ! | ATAAATTAAGAATGGTACCA+CGG | - | chr2_4:61195435-61195454 | None:intergenic | 25.0% |
| !! | AAACTTAGAGCATTAAACTT+AGG | - | chr2_4:61195878-61195897 | None:intergenic | 25.0% |
| !! | TAAGTTTAATGCTCTAAGTT+TGG | + | chr2_4:61195877-61195896 | Msa0339920:intron | 25.0% |
| ! | TTTCTACATGGAAAATTCTA+CGG | + | chr2_4:61196100-61196119 | Msa0339920:intron | 25.0% |
| !! | TACAGGTACTATTTTATTGT+CGG | - | chr2_4:61196372-61196391 | None:intergenic | 25.0% |
| !! | TATTCATGGATCTAATTTGT+TGG | - | chr2_4:61197336-61197355 | None:intergenic | 25.0% |
| ! | GGGGTACATATTAAAAAATA+AGG | + | chr2_4:61197490-61197509 | Msa0339920:three_prime_UTR | 25.0% |
| AGACATTTGATGAGTTAACT+CGG | - | chr2_4:61193302-61193321 | None:intergenic | 30.0% | |
| TAGATAGTAAGGGAAACATA+TGG | - | chr2_4:61193406-61193425 | None:intergenic | 30.0% | |
| !!! | TTCTTTTTGGTTGATTCTGA+TGG | - | chr2_4:61194022-61194041 | None:intergenic | 30.0% |
| TCAGAATCAACCAAAAAGAA+AGG | + | chr2_4:61194022-61194041 | Msa0339920:CDS | 30.0% | |
| ! | TGTTCATGTTTTTCACTAGT+CGG | + | chr2_4:61194071-61194090 | Msa0339920:intron | 30.0% |
| ACTAATAAAGAAGACACTTG+AGG | - | chr2_4:61194329-61194348 | None:intergenic | 30.0% | |
| AAGCTTGTAGAGTTACAAAT+GGG | - | chr2_4:61194493-61194512 | None:intergenic | 30.0% | |
| TAAGCTTGTAGAGTTACAAA+TGG | - | chr2_4:61194494-61194513 | None:intergenic | 30.0% | |
| !!! | TGAAAGCTTTTTTTTTGTGG+TGG | + | chr2_4:61194717-61194736 | Msa0339920:intron | 30.0% |
| GATGACATGACATATTTAGA+TGG | - | chr2_4:61194840-61194859 | None:intergenic | 30.0% | |
| ATGTTTATGTGACAACTTAG+TGG | - | chr2_4:61194862-61194881 | None:intergenic | 30.0% | |
| AGTACAAAGACAAGATAGAT+AGG | - | chr2_4:61194993-61195012 | None:intergenic | 30.0% | |
| CAGCATGTTACTATAGATTA+GGG | - | chr2_4:61195084-61195103 | None:intergenic | 30.0% | |
| !! | AGTTGATGATTTGTTCCTTT+CGG | + | chr2_4:61195114-61195133 | Msa0339920:intron | 30.0% |
| ! | AAATCAAAGTTGTTGCTTGA+TGG | - | chr2_4:61195472-61195491 | None:intergenic | 30.0% |
| TTAGGAGAGTAGTAACTAAA+CGG | - | chr2_4:61195522-61195541 | None:intergenic | 30.0% | |
| ATCTTACCCAACAAAATATG+TGG | + | chr2_4:61195552-61195571 | Msa0339920:intron | 30.0% | |
| ! | TCTCATCCACATATTTTGTT+GGG | - | chr2_4:61195561-61195580 | None:intergenic | 30.0% |
| ! | ATCTCATCCACATATTTTGT+TGG | - | chr2_4:61195562-61195581 | None:intergenic | 30.0% |
| !! | CCTAAGACTTTTAGTTAACT+TGG | - | chr2_4:61195599-61195618 | None:intergenic | 30.0% |
| CCAAGTTAACTAAAAGTCTT+AGG | + | chr2_4:61195596-61195615 | Msa0339920:intron | 30.0% | |
| CGAATAGATTAGGATTACAA+TGG | - | chr2_4:61195680-61195699 | None:intergenic | 30.0% | |
| ACTAACATCTCGAATAGATT+AGG | - | chr2_4:61195690-61195709 | None:intergenic | 30.0% | |
| TATTGAATGTCATGTTGCTA+AGG | - | chr2_4:61195795-61195814 | None:intergenic | 30.0% | |
| ! | AGTCATGAGAATGACTATTT+TGG | + | chr2_4:61196126-61196145 | Msa0339920:intron | 30.0% |
| ! | GATGAATTGATGATACTATG+AGG | - | chr2_4:61196227-61196246 | None:intergenic | 30.0% |
| TCTTAAGTGTTACACTTTGT+GGG | - | chr2_4:61196307-61196326 | None:intergenic | 30.0% | |
| TAGTAATGCTTGCAATATCT+TGG | - | chr2_4:61196398-61196417 | None:intergenic | 30.0% | |
| ATATTGCAAGCATTACTAGA+TGG | + | chr2_4:61196400-61196419 | Msa0339920:intron | 30.0% | |
| CAAACAGATGAGAAATTGAT+AGG | - | chr2_4:61196574-61196593 | None:intergenic | 30.0% | |
| GCAGTCTCGAAAAATAAAAT+TGG | - | chr2_4:61196832-61196851 | None:intergenic | 30.0% | |
| !!! | AGATCTTGTTTTGAACCATA+GGG | + | chr2_4:61197015-61197034 | Msa0339920:intron | 30.0% |
| GATTCTCTAATGCATATTCA+TGG | - | chr2_4:61197350-61197369 | None:intergenic | 30.0% | |
| CTCAAGCTAAATCATTACAA+AGG | - | chr2_4:61197595-61197614 | None:intergenic | 30.0% | |
| GTGGGATTTAATTAGTTCAC+CGG | + | chr2_4:61193517-61193536 | Msa0339920:CDS | 35.0% | |
| ! | TAGGTTTTTGTCTTCCAACA+AGG | - | chr2_4:61193623-61193642 | None:intergenic | 35.0% |
| !! | ATCACACAAAGCATTGATTG+AGG | + | chr2_4:61193763-61193782 | Msa0339920:CDS | 35.0% |
| AACCAAAAAGAAAGGTAACG+TGG | + | chr2_4:61194030-61194049 | Msa0339920:intron | 35.0% | |
| ! | ATCCACGTTACCTTTCTTTT+TGG | - | chr2_4:61194035-61194054 | None:intergenic | 35.0% |
| ! | TGTTTTTCACTAGTCGGTAA+TGG | + | chr2_4:61194077-61194096 | Msa0339920:intron | 35.0% |
| CTTAGAAAGTAGAAACAGAG+TGG | - | chr2_4:61194183-61194202 | None:intergenic | 35.0% | |
| TATCCACCTATATGCTATTG+AGG | + | chr2_4:61194544-61194563 | Msa0339920:intron | 35.0% | |
| ATCCACCTATATGCTATTGA+GGG | + | chr2_4:61194545-61194564 | Msa0339920:intron | 35.0% | |
| !!! | TGCTTTTTCTACCATGTGAT+AGG | + | chr2_4:61194568-61194587 | Msa0339920:intron | 35.0% |
| TTAGGATTTCACCTATCACA+TGG | - | chr2_4:61194582-61194601 | None:intergenic | 35.0% | |
| TGATAGGTGAAATCCTAAAG+TGG | + | chr2_4:61194584-61194603 | Msa0339920:intron | 35.0% | |
| !! | ATCAATCTAGTTGCCACTTT+AGG | - | chr2_4:61194600-61194619 | None:intergenic | 35.0% |
| !!! | AGCTTTTTTTTTGTGGTGGT+CGG | + | chr2_4:61194721-61194740 | Msa0339920:intron | 35.0% |
| TGCATAAGATATGCAAGATC+GGG | - | chr2_4:61194756-61194775 | None:intergenic | 35.0% | |
| GTGCATAAGATATGCAAGAT+CGG | - | chr2_4:61194757-61194776 | None:intergenic | 35.0% | |
| ! | TGTACTAGTTTGCATGTGAT+CGG | + | chr2_4:61195007-61195026 | Msa0339920:intron | 35.0% |
| GCAGCATGTTACTATAGATT+AGG | - | chr2_4:61195085-61195104 | None:intergenic | 35.0% | |
| GCAACTACACTTTGACAAAA+CGG | + | chr2_4:61195381-61195400 | Msa0339920:CDS | 35.0% | |
| GTTTGTGCAATTATTCGTAC+AGG | + | chr2_4:61195708-61195727 | Msa0339920:intron | 35.0% | |
| AGGATGAAGCAACAAATTCA+TGG | - | chr2_4:61195775-61195794 | None:intergenic | 35.0% | |
| TGTTACGCTTATAACAAGGT+AGG | - | chr2_4:61196283-61196302 | None:intergenic | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | - | chr2_4:61196306-61196325 | None:intergenic | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | - | chr2_4:61196308-61196327 | None:intergenic | 35.0% | |
| TTGCAATATCTTGGACTTAC+AGG | - | chr2_4:61196389-61196408 | None:intergenic | 35.0% | |
| ATTCCAACAGTCCAAATACT+CGG | + | chr2_4:61196860-61196879 | Msa0339920:intron | 35.0% | |
| !!! | CAGATCTTGTTTTGAACCAT+AGG | + | chr2_4:61197014-61197033 | Msa0339920:intron | 35.0% |
| ATATGATTCTGCCTCAAGAA+TGG | + | chr2_4:61197098-61197117 | Msa0339920:CDS | 35.0% | |
| CTTCAATATGTCCATTCTTG+AGG | - | chr2_4:61197112-61197131 | None:intergenic | 35.0% | |
| CATGTGTGTGTAAACAACAT+AGG | - | chr2_4:61197167-61197186 | None:intergenic | 35.0% | |
| !! | AGAGTAGTGACTTTAGAACA+AGG | + | chr2_4:61197555-61197574 | Msa0339920:three_prime_UTR | 35.0% |
| TGCTAACTGAGAGAACATCA+TGG | - | chr2_4:61193237-61193256 | None:intergenic | 40.0% | |
| TAGCAACAACAATCACACCA+TGG | + | chr2_4:61193252-61193271 | Msa0339920:CDS | 40.0% | |
| GGAAACATATGGTACCAGTT+CGG | - | chr2_4:61193395-61193414 | None:intergenic | 40.0% | |
| ! | TCTTCCTTTTCATGTAGTCG+TGG | + | chr2_4:61193498-61193517 | Msa0339920:intron | 40.0% |
| ! | CTTCCTTTTCATGTAGTCGT+GGG | + | chr2_4:61193499-61193518 | Msa0339920:intron | 40.0% |
| AATCCCACGACTACATGAAA+AGG | - | chr2_4:61193505-61193524 | None:intergenic | 40.0% | |
| GCGACTTCTAAACAGAATCA+TGG | + | chr2_4:61193695-61193714 | Msa0339920:CDS | 40.0% | |
| TGATTCTGATGGAGCAACAA+CGG | - | chr2_4:61194011-61194030 | None:intergenic | 40.0% | |
| ! | TTTCACTAGTCGGTAATGGT+TGG | + | chr2_4:61194081-61194100 | Msa0339920:intron | 40.0% |
| AAGCACCCTCAATAGCATAT+AGG | - | chr2_4:61194553-61194572 | None:intergenic | 40.0% | |
| !!! | GCTTTTTTTTTGTGGTGGTC+GGG | + | chr2_4:61194722-61194741 | Msa0339920:intron | 40.0% |
| !!! | CTTTTTTTTTGTGGTGGTCG+GGG | + | chr2_4:61194723-61194742 | Msa0339920:intron | 40.0% |
| GCATAAGATATGCAAGATCG+GGG | - | chr2_4:61194755-61194774 | None:intergenic | 40.0% | |
| GGCTAAATGTGGATGATTAG+TGG | - | chr2_4:61194936-61194955 | None:intergenic | 40.0% | |
| CTAGCTAGATAGGCTAAATG+TGG | - | chr2_4:61194947-61194966 | None:intergenic | 40.0% | |
| ACACCTCACTGTTTGTACAA+TGG | + | chr2_4:61196186-61196205 | Msa0339920:intron | 40.0% | |
| ATGCCATTGTACAAACAGTG+AGG | - | chr2_4:61196192-61196211 | None:intergenic | 40.0% | |
| ATACCGAGTATTTGGACTGT+TGG | - | chr2_4:61196866-61196885 | None:intergenic | 40.0% | |
| ! | GCTAGTTGATACCGAGTATT+TGG | - | chr2_4:61196874-61196893 | None:intergenic | 40.0% |
| !!! | CTTGTTTTGAACCATAGGGA+AGG | + | chr2_4:61197019-61197038 | Msa0339920:CDS | 40.0% |
| GTGAAAACATACCTTCCCTA+TGG | - | chr2_4:61197033-61197052 | None:intergenic | 40.0% | |
| GAGGCAGAATCATATCATTC+TGG | - | chr2_4:61197093-61197112 | None:intergenic | 40.0% | |
| !! | ATGGATCTAATTTGTTGGCG+TGG | - | chr2_4:61197331-61197350 | None:intergenic | 40.0% |
| CAATCACACCATGGTTCCAA+CGG | + | chr2_4:61193261-61193280 | Msa0339920:CDS | 45.0% | |
| CAGTTCGGAATTGTGACTCT+GGG | - | chr2_4:61193380-61193399 | None:intergenic | 45.0% | |
| ! | AGGAAGCGCGTAGATAGTAA+GGG | - | chr2_4:61193416-61193435 | None:intergenic | 45.0% |
| ! | AAGGAAGCGCGTAGATAGTA+AGG | - | chr2_4:61193417-61193436 | None:intergenic | 45.0% |
| ! | TATCTACGCGCTTCCTTTTC+AGG | + | chr2_4:61193420-61193439 | Msa0339920:CDS | 45.0% |
| GACAAAAACCTACGCTAACG+TGG | + | chr2_4:61193631-61193650 | Msa0339920:CDS | 45.0% | |
| ACCTACGCTAACGTGGTTAA+AGG | + | chr2_4:61193638-61193657 | Msa0339920:CDS | 45.0% | |
| CCTACGCTAACGTGGTTAAA+GGG | + | chr2_4:61193639-61193658 | Msa0339920:CDS | 45.0% | |
| CTACGCTAACGTGGTTAAAG+GGG | + | chr2_4:61193640-61193659 | Msa0339920:CDS | 45.0% | |
| CTGTCTCAGAAGCAAGGTAA+TGG | + | chr2_4:61193845-61193864 | Msa0339920:CDS | 45.0% | |
| ! | TCTCAGAAGCAAGGTAATGG+AGG | + | chr2_4:61193848-61193867 | Msa0339920:CDS | 45.0% |
| !! | CTCAGAAGCAAGGTAATGGA+GGG | + | chr2_4:61193849-61193868 | Msa0339920:CDS | 45.0% |
| !!! | ATGATGCAGGCCGTTTTTCT+TGG | + | chr2_4:61193935-61193954 | Msa0339920:CDS | 45.0% |
| ! | TAGTCGGTAATGGTTGGTTG+CGG | + | chr2_4:61194087-61194106 | Msa0339920:intron | 45.0% |
| ! | TGGTTGGTTGCGGAATCAAA+TGG | + | chr2_4:61194097-61194116 | Msa0339920:intron | 45.0% |
| CACCCTCAATAGCATATAGG+TGG | - | chr2_4:61194550-61194569 | None:intergenic | 45.0% | |
| AAGGAACGAGCTAGCTAGAT+AGG | - | chr2_4:61194957-61194976 | None:intergenic | 45.0% | |
| ! | CTAGTTTGCATGTGATCGGA+TGG | + | chr2_4:61195011-61195030 | Msa0339920:intron | 45.0% |
| TCTTGCTGGTATAAGGACAG+TGG | - | chr2_4:61195347-61195366 | None:intergenic | 45.0% | |
| GCACAACTCTTGCTGGTATA+AGG | - | chr2_4:61195354-61195373 | None:intergenic | 45.0% | |
| TATACCAGCAAGAGTTGTGC+AGG | + | chr2_4:61195354-61195373 | Msa0339920:CDS | 45.0% | |
| AAAACGGCTCCCAAAGTTGT+TGG | + | chr2_4:61195397-61195416 | Msa0339920:CDS | 45.0% | |
| TTAAGAATGGTACCACGGAG+TGG | - | chr2_4:61195430-61195449 | None:intergenic | 45.0% | |
| ! | GGGGTGTTACGCTTATAACA+AGG | - | chr2_4:61196287-61196306 | None:intergenic | 45.0% |
| !!! | CTGTTGCTGCTTTTGTTGAC+TGG | - | chr2_4:61197066-61197085 | None:intergenic | 45.0% |
| !! | GGACTAGTTGCAAATGCATG+TGG | - | chr2_4:61197146-61197165 | None:intergenic | 45.0% |
| ! | TTGGCGTGGAGTTCCTTTTA+TGG | - | chr2_4:61197317-61197336 | None:intergenic | 45.0% |
| !!! | TATCTTTAAAATTATTTATT+GGG | - | chr2_4:61194228-61194247 | None:intergenic | 5.0% |
| !!! | ATATCTTTAAAATTATTTAT+TGG | - | chr2_4:61194229-61194248 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAATACATTTA+AGG | - | chr2_4:61194405-61194424 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTAATTTAAATC+GGG | - | chr2_4:61195737-61195756 | None:intergenic | 5.0% |
| GTGATGAAATCCTCGTCCGT+TGG | - | chr2_4:61193280-61193299 | None:intergenic | 50.0% | |
| TTCGGAATTGTGACTCTGGG+AGG | - | chr2_4:61193377-61193396 | None:intergenic | 50.0% | |
| CCAGTTCGGAATTGTGACTC+TGG | - | chr2_4:61193381-61193400 | None:intergenic | 50.0% | |
| CCAGAGTCACAATTCCGAAC+TGG | + | chr2_4:61193378-61193397 | Msa0339920:CDS | 50.0% | |
| GTTCACCGGATTCAACTCTG+TGG | + | chr2_4:61193531-61193550 | Msa0339920:CDS | 50.0% | |
| GGTGACCACAGAGTTGAATC+CGG | - | chr2_4:61193539-61193558 | None:intergenic | 50.0% | |
| GGATTCAACTCTGTGGTCAC+CGG | + | chr2_4:61193538-61193557 | Msa0339920:CDS | 50.0% | |
| TCACCGGTGAGTTGTAACCA+AGG | + | chr2_4:61193554-61193573 | Msa0339920:CDS | 50.0% | |
| CACCGGTGAGTTGTAACCAA+GGG | + | chr2_4:61193555-61193574 | Msa0339920:CDS | 50.0% | |
| CTCCCTTGGTTACAACTCAC+CGG | - | chr2_4:61193560-61193579 | None:intergenic | 50.0% | |
| TGTAACCAAGGGAGCTCAGA+AGG | + | chr2_4:61193566-61193585 | Msa0339920:CDS | 50.0% | |
| GTAACCAAGGGAGCTCAGAA+GGG | + | chr2_4:61193567-61193586 | Msa0339920:CDS | 50.0% | |
| TTCCAACAAGGTGTAGCTGG+CGG | - | chr2_4:61193611-61193630 | None:intergenic | 50.0% | |
| GTCTTCCAACAAGGTGTAGC+TGG | - | chr2_4:61193614-61193633 | None:intergenic | 50.0% | |
| CCCTTTAACCACGTTAGCGT+AGG | - | chr2_4:61193642-61193661 | None:intergenic | 50.0% | |
| CATGCTCTGTCTCAGAAGCA+AGG | + | chr2_4:61193839-61193858 | Msa0339920:CDS | 50.0% | |
| GTCCTCGTCCTCATCTAACA+AGG | + | chr2_4:61193882-61193901 | Msa0339920:CDS | 50.0% | |
| !!! | ATGCAGGCCGTTTTTCTTGG+TGG | + | chr2_4:61193938-61193957 | Msa0339920:CDS | 50.0% |
| !!! | TGCAGGCCGTTTTTCTTGGT+GGG | + | chr2_4:61193939-61193958 | Msa0339920:CDS | 50.0% |
| ACCGGACCCACCAAGAAAAA+CGG | - | chr2_4:61193948-61193967 | None:intergenic | 50.0% | |
| ACCTGTCCCACTTCTTGAAC+CGG | - | chr2_4:61193966-61193985 | None:intergenic | 50.0% | |
| TGAGCTTAGCTCAGCTGGTT+GGG | - | chr2_4:61194783-61194802 | None:intergenic | 50.0% | |
| AAAGCCTGCACAACTCTTGC+TGG | - | chr2_4:61195361-61195380 | None:intergenic | 50.0% | |
| TTGTCCCAAGTCGTGACAGA+GGG | + | chr2_4:61197470-61197489 | Msa0339920:three_prime_UTR | 50.0% | |
| ATCCTCGTCCGTTGGAACCA+TGG | - | chr2_4:61193272-61193291 | None:intergenic | 55.0% | |
| ATGACCCTTCTGAGCTCCCT+TGG | - | chr2_4:61193574-61193593 | None:intergenic | 55.0% | |
| !! | GGCCTTGTTAGATGAGGACG+AGG | - | chr2_4:61193887-61193906 | None:intergenic | 55.0% |
| !! | GGAGCAGGCCTTGTTAGATG+AGG | - | chr2_4:61193893-61193912 | None:intergenic | 55.0% |
| CTGCATCATTCCTCCACCAC+TGG | - | chr2_4:61193924-61193943 | None:intergenic | 55.0% | |
| ! | CAGTGGTGGAGGAATGATGC+AGG | + | chr2_4:61193922-61193941 | Msa0339920:CDS | 55.0% |
| !!! | GCCGTTTTTCTTGGTGGGTC+CGG | + | chr2_4:61193944-61193963 | Msa0339920:CDS | 55.0% |
| GTGGGTCCGGTTCAAGAAGT+GGG | + | chr2_4:61193957-61193976 | Msa0339920:CDS | 55.0% | |
| TCCGGTTCAAGAAGTGGGAC+AGG | + | chr2_4:61193962-61193981 | Msa0339920:CDS | 55.0% | |
| ! | GGTGTTTTCTTGCCTCGTGC+TGG | + | chr2_4:61193983-61194002 | Msa0339920:CDS | 55.0% |
| GTGAGCTTAGCTCAGCTGGT+TGG | - | chr2_4:61194784-61194803 | None:intergenic | 55.0% | |
| GCATGTGATCGGATGGTGAG+TGG | + | chr2_4:61195018-61195037 | Msa0339920:intron | 55.0% | |
| GGAGGGACGCCAACAACTTT+GGG | - | chr2_4:61195409-61195428 | None:intergenic | 55.0% | |
| TGGAGGGACGCCAACAACTT+TGG | - | chr2_4:61195410-61195429 | None:intergenic | 55.0% | |
| GAATGGTACCACGGAGTGGA+GGG | - | chr2_4:61195426-61195445 | None:intergenic | 55.0% | |
| AGAATGGTACCACGGAGTGG+AGG | - | chr2_4:61195427-61195446 | None:intergenic | 55.0% | |
| GTTGTCCCAAGTCGTGACAG+AGG | + | chr2_4:61197469-61197488 | Msa0339920:three_prime_UTR | 55.0% | |
| TGTCCCAAGTCGTGACAGAG+GGG | + | chr2_4:61197471-61197490 | Msa0339920:three_prime_UTR | 55.0% | |
| GTACCCCTCTGTCACGACTT+GGG | - | chr2_4:61197477-61197496 | None:intergenic | 55.0% | |
| TGTACCCCTCTGTCACGACT+TGG | - | chr2_4:61197478-61197497 | None:intergenic | 55.0% | |
| CACCATGGTTCCAACGGACG+AGG | + | chr2_4:61193267-61193286 | Msa0339920:CDS | 60.0% | |
| CTCCGCCAGCTACACCTTGT+TGG | + | chr2_4:61193606-61193625 | Msa0339920:CDS | 60.0% | |
| ! | CCACTGGTCTGCAATGGAGC+AGG | - | chr2_4:61193908-61193927 | None:intergenic | 60.0% |
| CCTGCTCCATTGCAGACCAG+TGG | + | chr2_4:61193905-61193924 | Msa0339920:CDS | 60.0% | |
| GCTCCATTGCAGACCAGTGG+TGG | + | chr2_4:61193908-61193927 | Msa0339920:CDS | 60.0% | |
| ! | CCTCCACCACTGGTCTGCAA+TGG | - | chr2_4:61193914-61193933 | None:intergenic | 60.0% |
| CCATTGCAGACCAGTGGTGG+AGG | + | chr2_4:61193911-61193930 | Msa0339920:CDS | 60.0% | |
| GGTGGGTCCGGTTCAAGAAG+TGG | + | chr2_4:61193956-61193975 | Msa0339920:CDS | 60.0% | |
| GCAACAACGGTTCCAGCACG+AGG | - | chr2_4:61193998-61194017 | None:intergenic | 60.0% | |
| CCTCGTGAGCTTAGCTCAGC+TGG | - | chr2_4:61194788-61194807 | None:intergenic | 60.0% | |
| CCAGCTGAGCTAAGCTCACG+AGG | + | chr2_4:61194785-61194804 | Msa0339920:intron | 60.0% | |
| GTTGGCGTCCCTCCACTCCG+TGG | + | chr2_4:61195415-61195434 | Msa0339920:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 61193211 | 61197677 | 61193211 | ID=Msa0339920;Name=Msa0339920 |
| chr2_4 | mRNA | 61193211 | 61197677 | 61193211 | ID=Msa0339920-mRNA-1;Parent=Msa0339920;Name=Msa0339920-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.75|0.8|1|0.75|0.6|5|511|325 |
| chr2_4 | exon | 61193211 | 61193441 | 61193211 | ID=Msa0339920-mRNA-1:exon:19157;Parent=Msa0339920-mRNA-1 |
| chr2_4 | exon | 61193515 | 61194043 | 61193515 | ID=Msa0339920-mRNA-1:exon:19158;Parent=Msa0339920-mRNA-1 |
| chr2_4 | exon | 61195332 | 61195436 | 61195332 | ID=Msa0339920-mRNA-1:exon:19159;Parent=Msa0339920-mRNA-1 |
| chr2_4 | exon | 61197017 | 61197146 | 61197017 | ID=Msa0339920-mRNA-1:exon:19160;Parent=Msa0339920-mRNA-1 |
| chr2_4 | exon | 61197184 | 61197677 | 61197184 | ID=Msa0339920-mRNA-1:exon:19161;Parent=Msa0339920-mRNA-1 |
| chr2_4 | CDS | 61193211 | 61193441 | 61193211 | ID=Msa0339920-mRNA-1:cds;Parent=Msa0339920-mRNA-1 |
| chr2_4 | CDS | 61193515 | 61194043 | 61193515 | ID=Msa0339920-mRNA-1:cds;Parent=Msa0339920-mRNA-1 |
| chr2_4 | CDS | 61195332 | 61195436 | 61195332 | ID=Msa0339920-mRNA-1:cds;Parent=Msa0339920-mRNA-1 |
| chr2_4 | CDS | 61197017 | 61197129 | 61197017 | ID=Msa0339920-mRNA-1:cds;Parent=Msa0339920-mRNA-1 |
| chr2_4 | three_prime_UTR | 61197130 | 61197146 | 61197130 | ID=Msa0339920-mRNA-1:three_prime_utr;Parent=Msa0339920-mRNA-1 |
| chr2_4 | three_prime_UTR | 61197184 | 61197677 | 61197184 | ID=Msa0339920-mRNA-1:three_prime_utr;Parent=Msa0339920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
