AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1116750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1116750 MtrunA17_Chr7g0259161 100.000 350 0 0 1 350 1 350 0.0 726
Msa1116750 MtrunA17_Chr1g0196311 84.571 350 48 4 1 350 17 360 0.0 614
Msa1116750 MtrunA17_Chr1g0191301 70.655 351 95 6 1 350 1 344 0.0 512
Msa1116750 MtrunA17_Chr6g0477161 41.083 314 177 4 35 347 378 684 1.98e-76 248
Msa1116750 MtrunA17_Chr6g0477161 40.964 332 187 5 17 347 12 335 3.08e-76 248
Msa1116750 MtrunA17_Chr6g0477251 38.776 343 201 4 6 347 554 888 3.78e-75 248
Msa1116750 MtrunA17_Chr6g0477251 37.463 339 203 4 10 347 4 334 9.46e-70 234
Msa1116750 MtrunA17_Chr6g0477231 35.588 340 214 4 9 347 1 336 3.33e-73 230
Msa1116750 MtrunA17_Chr6g0477271 35.988 339 199 5 11 346 28 351 7.53e-64 207
Msa1116750 MtrunA17_Chr6g0477241 37.557 221 129 3 36 254 41 254 1.86e-49 167
Msa1116750 MtrunA17_Chr4g0025291 35.135 296 159 8 61 346 43 315 5.31e-43 151
Msa1116750 MtrunA17_Chr7g0214851 33.333 312 168 11 61 347 54 350 2.65e-39 142
Msa1116750 MtrunA17_Chr7g0268091 35.776 232 135 6 106 327 69 296 4.12e-38 138
Msa1116750 MtrunA17_Chr1g0210121 31.949 313 173 8 53 346 51 342 1.85e-37 137
Msa1116750 MtrunA17_Chr1g0204211 37.619 210 110 5 78 283 83 275 1.27e-36 135
Msa1116750 MtrunA17_Chr1g0149271 31.579 304 179 9 63 346 13 307 1.27e-36 134
Msa1116750 MtrunA17_Chr7g0235741 35.135 259 142 8 106 350 107 353 2.97e-35 132
Msa1116750 MtrunA17_Chr8g0351211 32.308 260 157 5 99 346 64 316 5.48e-35 130
Msa1116750 MtrunA17_Chr6g0474411 32.231 242 144 5 32 268 22 248 1.31e-34 129
Msa1116750 MtrunA17_Chr3g0081521 34.167 240 146 5 97 328 79 314 1.66e-34 129
Msa1116750 MtrunA17_Chr6g0474631 34.496 258 155 8 100 347 72 325 2.96e-34 128
Msa1116750 MtrunA17_Chr4g0045181 32.026 306 177 10 53 347 33 318 4.17e-34 127
Msa1116750 MtrunA17_Chr6g0474541 32.787 244 138 7 32 268 47 271 6.87e-34 128
Msa1116750 MtrunA17_Chr6g0474471 32.210 267 164 6 69 329 54 309 1.22e-33 127
Msa1116750 MtrunA17_Chr4g0045131 27.714 350 205 12 27 346 23 354 2.48e-33 126
Msa1116750 MtrunA17_Chr6g0458881 31.010 287 146 5 80 329 146 417 5.56e-33 127
Msa1116750 MtrunA17_Chr6g0474491 34.274 248 136 6 78 314 62 293 8.51e-33 124
Msa1116750 MtrunA17_Chr3g0095711 31.757 296 168 12 72 346 86 368 4.24e-32 123
Msa1116750 MtrunA17_Chr1g0204201 38.012 171 97 3 106 268 78 247 1.36e-30 118
Msa1116750 MtrunA17_Chr4g0045121 31.250 256 147 7 106 346 76 317 1.89e-30 118
Msa1116750 MtrunA17_Chr8g0351171 29.470 302 180 9 25 315 8 287 3.16e-30 117
Msa1116750 MtrunA17_Chr3g0133701 31.090 312 170 12 53 347 32 315 8.22e-30 116
Msa1116750 MtrunA17_Chr8g0351201 29.070 258 166 5 101 347 74 325 1.57e-29 115
Msa1116750 MtrunA17_Chr7g0228721 30.741 270 137 5 106 329 165 430 2.90e-29 117
Msa1116750 MtrunA17_Chr8g0353951 28.529 333 196 14 32 347 22 329 1.03e-27 110
Msa1116750 MtrunA17_Chr5g0394251 29.341 334 189 15 25 340 9 313 1.28e-26 107
Msa1116750 MtrunA17_Chr4g0045191 29.949 197 116 5 38 231 31 208 3.91e-26 106
Msa1116750 MtrunA17_Chr1g0205871 28.904 301 170 11 38 320 21 295 1.01e-24 102
Msa1116750 MtrunA17_Chr7g0233871 31.081 296 165 11 69 347 53 326 1.59e-24 102
Msa1116750 MtrunA17_Chr5g0394241 27.778 306 169 14 23 308 12 285 1.07e-23 99.8
Msa1116750 MtrunA17_Chr5g0394211 28.041 296 170 11 38 316 56 325 3.49e-22 95.9
Msa1116750 MtrunA17_Chr1g0205791 32.031 256 133 10 69 311 51 278 3.30e-21 93.2
Msa1116750 MtrunA17_Chr1g0205781 31.538 260 133 11 69 311 53 284 7.48e-21 91.7
Msa1116750 MtrunA17_Chr6g0474611 32.941 170 103 6 186 347 5 171 2.81e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1116750 AT3G63010.1 72.911 347 89 3 1 347 1 342 0.0 544
Msa1116750 AT5G27320.1 69.231 351 99 6 1 350 1 343 6.58e-178 497
Msa1116750 AT3G05120.1 66.667 351 110 5 1 350 1 345 3.01e-173 485
Msa1116750 AT5G23530.1 34.615 338 194 7 15 347 12 327 6.75e-62 201
Msa1116750 AT5G16080.1 32.026 306 173 7 59 349 59 344 9.04e-44 154
Msa1116750 AT1G68620.1 35.246 244 132 6 69 306 65 288 4.30e-42 149
Msa1116750 AT5G62180.1 30.970 268 169 5 32 294 15 271 4.37e-40 144
Msa1116750 AT2G45600.1 33.188 229 139 3 106 322 66 292 5.15e-35 130
Msa1116750 AT5G14310.1 32.331 266 135 5 106 329 151 413 5.02e-33 127
Msa1116750 AT1G19190.1 35.789 285 140 14 53 321 30 287 6.48e-33 125
Msa1116750 AT2G03550.1 31.481 324 176 12 39 347 19 311 6.69e-33 124
Msa1116750 AT1G47480.1 29.595 321 194 11 33 347 16 310 8.31e-33 124
Msa1116750 AT5G06570.1 35.714 266 154 9 96 347 64 326 2.41e-32 124
Msa1116750 AT5G06570.2 35.714 266 154 9 96 347 64 326 2.41e-32 124
Msa1116750 AT5G06570.3 35.714 266 154 9 96 347 79 341 3.62e-32 123
Msa1116750 AT5G06570.4 35.714 266 154 9 96 347 79 341 3.62e-32 123
Msa1116750 AT2G45610.1 28.720 289 179 6 69 347 53 324 3.86e-30 117
Msa1116750 AT3G27320.2 29.023 348 170 9 56 329 51 395 3.45e-29 117
Msa1116750 AT3G27320.1 31.058 293 144 6 78 329 152 427 1.44e-28 115
Msa1116750 AT3G48690.1 32.836 268 146 11 50 302 27 275 7.75e-28 111
Msa1116750 AT3G48700.1 31.348 319 177 14 50 346 27 325 1.03e-27 111
Msa1116750 AT1G49650.1 32.090 268 154 8 53 311 86 334 1.44e-26 108
Msa1116750 AT1G49640.1 29.183 257 154 9 56 308 40 272 1.21e-24 102
Msa1116750 AT1G49660.1 30.303 264 159 6 53 308 30 276 1.11e-23 100

Find 105 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTGATGGTTTGGAATTT+GGG 0.103998 7_3:+64551157 Msa1116750:three_prime_UTR
TTGGTTGATGGTTTGGAATT+TGG 0.150301 7_3:+64551156 Msa1116750:three_prime_UTR
ACAATTTCTGTTGTACTTAA+TGG 0.166515 7_3:-64550202 None:intergenic
TGGCTTATGTGGATGGTTTA+AGG 0.186814 7_3:+64550809 Msa1116750:CDS
GTGGATGGTTTAAGGAATTT+TGG 0.215905 7_3:+64550817 Msa1116750:CDS
TGATCATTTCTATTGCCTTA+TGG 0.245202 7_3:+64550903 Msa1116750:CDS
ATTCTTCTTCATCCTTTGTT+TGG 0.284217 7_3:+64550559 Msa1116750:CDS
AATAACAGGTTGCGATATTC+TGG 0.287671 7_3:-64551225 None:intergenic
GCAGAAGGAATTGAAGTGTT+AGG 0.327890 7_3:+64550532 Msa1116750:CDS
GAGAAAGAACACAATAATAA+TGG 0.334165 7_3:-64549462 None:intergenic
AAAAGTCTTGTTTGTGTGGC+TGG 0.337676 7_3:+64550760 Msa1116750:CDS
GAAGATTAGGTATTGGTTGA+TGG 0.338553 7_3:+64551144 Msa1116750:three_prime_UTR
CAATAGAAATGATCATTATT+AGG 0.341519 7_3:-64550895 None:intergenic
TGGTCTCTATCTTCACCTTC+TGG 0.343587 7_3:-64550673 None:intergenic
AATGGGTGAAGTCAAGAAAA+TGG 0.346501 7_3:+64550407 Msa1116750:CDS
TTAGGTATTGGTTGATGGTT+TGG 0.346685 7_3:+64551149 Msa1116750:three_prime_UTR
GATTCTGAAATGAGATTAGA+TGG 0.348082 7_3:+64550598 Msa1116750:CDS
TCTTGTTTGTGTGGCTGGTT+TGG 0.349537 7_3:+64550765 Msa1116750:CDS
TACAAGATCGTGATTGGTAT+TGG 0.350184 7_3:+64550638 Msa1116750:CDS
TACCTTAAGGAGGCTACTAT+TGG 0.351911 7_3:+64550859 Msa1116750:CDS
TAGAGGGGAGATTGAAGATT+AGG 0.352612 7_3:+64551131 Msa1116750:three_prime_UTR
TTCACTGAGGTTGACTTCAT+TGG 0.353524 7_3:-64549513 None:intergenic
TGTTAAACTTCTTTACCTTA+AGG 0.362269 7_3:+64550846 Msa1116750:CDS
AAGTCAACCTCAGTGAATCT+AGG 0.363736 7_3:+64549519 Msa1116750:CDS
GGAGATTGAAGATTAGGTAT+TGG 0.364098 7_3:+64551137 Msa1116750:three_prime_UTR
CTTCTTCATCCTTTGTTTGG+TGG 0.365813 7_3:+64550562 Msa1116750:CDS
TTTAAGTACACGCCATTACT+TGG 0.372021 7_3:-64551062 None:intergenic
AAGTAATAGTATTAACAGTT+AGG 0.372219 7_3:-64550949 None:intergenic
TTTGTTAAGTAAGGGTGAAA+AGG 0.383413 7_3:-64550975 None:intergenic
TTCAGAAAATGAATCTCAAT+GGG 0.401908 7_3:+64550159 Msa1116750:CDS
AGTTCTTGATTTCCTCCATA+AGG 0.402550 7_3:-64550918 None:intergenic
CCATGGAAGAATACTATAAC+AGG 0.405998 7_3:-64550226 None:intergenic
TTAGATTACAAGATCGTGAT+TGG 0.411360 7_3:+64550632 Msa1116750:CDS
AAAGTTTATGTTTACATGGC+AGG 0.415400 7_3:+64550451 Msa1116750:CDS
AGTTACTATTATAACATCTA+TGG 0.415455 7_3:+64551098 Msa1116750:three_prime_UTR
AGTCCCGGCAAATGCTATTC+CGG 0.421368 7_3:+64550063 Msa1116750:CDS
AACCAATAGTAGCCTCCTTA+AGG 0.425272 7_3:-64550861 None:intergenic
TTGTAAAGCAGCTGTTGTTT+CGG 0.425945 7_3:+64550318 Msa1116750:CDS
CACCCTGCTTGTAACCCGTT+TGG 0.430827 7_3:+64550694 Msa1116750:CDS
TTGTTAAGTAAGGGTGAAAA+GGG 0.435763 7_3:-64550974 None:intergenic
TGTAACCCGTTTGGTCCAAA+AGG 0.441552 7_3:+64550703 Msa1116750:CDS
TACATGGCAGGTGATAGTTC+TGG 0.444051 7_3:+64550463 Msa1116750:CDS
AAATGATTAAATACAAAGAA+AGG 0.446782 7_3:-64549418 None:intergenic
CAGAAGGAATTGAAGTGTTA+GGG 0.454064 7_3:+64550533 Msa1116750:CDS
CTTCAGAAAATGAATCTCAA+TGG 0.456710 7_3:+64550158 Msa1116750:CDS
AGATTGGCAATTGGCTTATG+TGG 0.475777 7_3:+64550798 Msa1116750:CDS
TCATTGGTACCAGTCATGTC+TGG 0.475912 7_3:-64549497 None:intergenic
GAAGTGATGTGGGTTAGAAA+AGG 0.478881 7_3:-64549323 None:intergenic
AAGTGATGTGGGTTAGAAAA+GGG 0.491006 7_3:-64549322 None:intergenic
GGTTAATTACCGACGATCAC+CGG 0.491592 7_3:+64550339 Msa1116750:CDS
GGACCAAACGGGTTACAAGC+AGG 0.492003 7_3:-64550697 None:intergenic
CCTGTTATAGTATTCTTCCA+TGG 0.492262 7_3:+64550226 Msa1116750:CDS
ATAAGAACATATGTATTCAA+TGG 0.496984 7_3:-64549956 None:intergenic
TCCTAAAAGTCTTGTTTGTG+TGG 0.502096 7_3:+64550756 Msa1116750:CDS
GTAACCCGTTTGGTCCAAAA+GGG 0.503887 7_3:+64550704 Msa1116750:CDS
CATGTGCTTATGAAGATGGC+TGG 0.506515 7_3:+64550374 Msa1116750:CDS
GGTTGATGGTTTGGAATTTG+GGG 0.512139 7_3:+64551158 Msa1116750:three_prime_UTR
ATGGCTGGAATGCACTCAAA+TGG 0.521371 7_3:+64550389 Msa1116750:CDS
AAAGAAAGTTTATGTTTACA+TGG 0.521453 7_3:+64550447 Msa1116750:CDS
TTTCCATGTGCTTATGAAGA+TGG 0.528955 7_3:+64550370 Msa1116750:CDS
TGGCAATTGGCTTATGTGGA+TGG 0.532054 7_3:+64550802 Msa1116750:CDS
GGTGTATTAATTGAAGAGAA+GGG 0.534817 7_3:-64549231 None:intergenic
AATGATTAAATACAAAGAAA+GGG 0.535149 7_3:-64549417 None:intergenic
TGGTGTATTAATTGAAGAGA+AGG 0.535556 7_3:-64549232 None:intergenic
GATAAAAGTGTACGTGGCGT+AGG 0.542211 7_3:-64549291 None:intergenic
ACGTATAAGTTTAATCTCAA+AGG 0.545836 7_3:-64549259 None:intergenic
CAAGAAACTCTGCTAAATCT+CGG 0.546001 7_3:-64550033 None:intergenic
AGTCAACCTCAGTGAATCTA+GGG 0.546591 7_3:+64549520 Msa1116750:CDS
ATAAGTTTAATCTCAAAGGT+TGG 0.547903 7_3:-64549255 None:intergenic
GTTTCTTGACAGAAAAGTCC+CGG 0.552120 7_3:+64550048 Msa1116750:CDS
TCGACCGGAATAGCATTTGC+CGG 0.555684 7_3:-64550067 None:intergenic
CGACCGGAATAGCATTTGCC+GGG 0.556973 7_3:-64550066 None:intergenic
CATGGAGAAGAGAACAAAAG+AGG 0.557146 7_3:-64549373 None:intergenic
GACCAAACGGGTTACAAGCA+GGG 0.558028 7_3:-64550696 None:intergenic
CAAGAAAATGGCTTCAAAGT+GGG 0.561680 7_3:+64550419 Msa1116750:CDS
GCAAATGCTATTCCGGTCGA+TGG 0.562535 7_3:+64550070 Msa1116750:CDS
TGGCTGGAATGCACTCAAAT+GGG 0.565881 7_3:+64550390 Msa1116750:CDS
AGAAGAAAGAGTGAACCTCA+TGG 0.569929 7_3:-64549391 None:intergenic
ACCGATACTCCGGTGATCGT+CGG 0.572460 7_3:-64550348 None:intergenic
TAAACTTCTTTACCTTAAGG+AGG 0.574148 7_3:+64550849 Msa1116750:CDS
AACAACTAACCAGACATGAC+TGG 0.578176 7_3:+64549488 Msa1116750:exon
AATCTTCTAAGAAGAGCAGA+TGG 0.579373 7_3:+64550001 Msa1116750:CDS
AATGAGAGAAGCTTCCGCCA+TGG 0.583093 7_3:-64550243 None:intergenic
AAAAGTGTACGTGGCGTAGG+TGG 0.584599 7_3:-64549288 None:intergenic
TCAGTAATTAGTACTACAAG+AGG 0.584693 7_3:-64551191 None:intergenic
GTGAAAGAGTCGAAGTGATG+TGG 0.589030 7_3:-64549334 None:intergenic
TCATTTCTATTGCCTTATGG+AGG 0.599565 7_3:+64550906 Msa1116750:CDS
TGTAGCAGTAAAAGCTTGTG+AGG 0.600327 7_3:+64550504 Msa1116750:CDS
CAGCCATCTTCATAAGCACA+TGG 0.605205 7_3:-64550373 None:intergenic
AATGAAAAGACTCCATCGAC+CGG 0.605436 7_3:-64550082 None:intergenic
TGAAAGAGTCGAAGTGATGT+GGG 0.608239 7_3:-64549333 None:intergenic
TCAAGAAAATGGCTTCAAAG+TGG 0.615492 7_3:+64550418 Msa1116750:CDS
AGTTTAATCTCAAAGGTTGG+TGG 0.616241 7_3:-64549252 None:intergenic
TACTATTATAACATCTATGG+TGG 0.625048 7_3:+64551101 Msa1116750:three_prime_UTR
GCACATGGAAACCGATACTC+CGG 0.625683 7_3:-64550358 None:intergenic
ATGGCAGGTGATAGTTCTGG+TGG 0.630946 7_3:+64550466 Msa1116750:CDS
GATCATATCGAACGAAACAC+CGG 0.631025 7_3:+64550106 Msa1116750:CDS
ATAAACACGATTGAATAGAC+CGG 0.640482 7_3:-64550125 None:intergenic
TAACCCGTTTGGTCCAAAAG+GGG 0.642733 7_3:+64550705 Msa1116750:CDS
ACTAATTACTGAATGTGACA+TGG 0.685280 7_3:+64551202 Msa1116750:three_prime_UTR
TGTAGAGATAAAAGTGTACG+TGG 0.700036 7_3:-64549297 None:intergenic
GTTATAGTATTCTTCCATGG+CGG 0.709656 7_3:+64550229 Msa1116750:CDS
TCAGAAAATGAATCTCAATG+GGG 0.736042 7_3:+64550160 Msa1116750:CDS
ATATTACCCTAGATTCACTG+AGG 0.743147 7_3:-64549526 None:intergenic
CAAACGGGTTACAAGCAGGG+TGG 0.789743 7_3:-64550693 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGATTAAATACAAAGAAA+GGG - chr7_3:64549420-64549439 None:intergenic 15.0%
!! AAATGATTAAATACAAAGAA+AGG - chr7_3:64549421-64549440 None:intergenic 15.0%
!!! ATCATGTAATATTTTTTTGT+GGG + chr7_3:64549705-64549724 Msa1116750:intron 15.0%
!! AAAAAACAAAAACTTTAGAT+TGG - chr7_3:64549918-64549937 None:intergenic 15.0%
!! AATGATTAAATACAAAGAAA+GGG - chr7_3:64549420-64549439 None:intergenic 15.0%
!! AAATGATTAAATACAAAGAA+AGG - chr7_3:64549421-64549440 None:intergenic 15.0%
!!! ATCATGTAATATTTTTTTGT+GGG + chr7_3:64549705-64549724 Msa1116750:intron 15.0%
!! AAAAAACAAAAACTTTAGAT+TGG - chr7_3:64549918-64549937 None:intergenic 15.0%
!!! AAAAACAAAACTTTCTAAGA+TGG - chr7_3:64549560-64549579 None:intergenic 20.0%
!!! GATCATGTAATATTTTTTTG+TGG + chr7_3:64549704-64549723 Msa1116750:intron 20.0%
!! AGAAAAATGAAACAAATCTT+GGG - chr7_3:64549864-64549883 None:intergenic 20.0%
!! AAGAAAAATGAAACAAATCT+TGG - chr7_3:64549865-64549884 None:intergenic 20.0%
!! ATAAGAACATATGTATTCAA+TGG - chr7_3:64549959-64549978 None:intergenic 20.0%
!! AAAGAAAGTTTATGTTTACA+TGG + chr7_3:64550447-64550466 Msa1116750:CDS 20.0%
!! CAATAGAAATGATCATTATT+AGG - chr7_3:64550898-64550917 None:intergenic 20.0%
!! AAGTAATAGTATTAACAGTT+AGG - chr7_3:64550952-64550971 None:intergenic 20.0%
!!! AAAAGCTTGAATTTTTCATT+TGG + chr7_3:64550995-64551014 Msa1116750:three_prime_UTR 20.0%
!!! AAAGCTTGAATTTTTCATTT+GGG + chr7_3:64550996-64551015 Msa1116750:three_prime_UTR 20.0%
!! AGTTACTATTATAACATCTA+TGG + chr7_3:64551098-64551117 Msa1116750:three_prime_UTR 20.0%
!!! AAAAACAAAACTTTCTAAGA+TGG - chr7_3:64549560-64549579 None:intergenic 20.0%
!!! GATCATGTAATATTTTTTTG+TGG + chr7_3:64549704-64549723 Msa1116750:intron 20.0%
!! AGAAAAATGAAACAAATCTT+GGG - chr7_3:64549864-64549883 None:intergenic 20.0%
!! AAGAAAAATGAAACAAATCT+TGG - chr7_3:64549865-64549884 None:intergenic 20.0%
!! ATAAGAACATATGTATTCAA+TGG - chr7_3:64549959-64549978 None:intergenic 20.0%
!! AAAGAAAGTTTATGTTTACA+TGG + chr7_3:64550447-64550466 Msa1116750:CDS 20.0%
!! CAATAGAAATGATCATTATT+AGG - chr7_3:64550898-64550917 None:intergenic 20.0%
!! AAGTAATAGTATTAACAGTT+AGG - chr7_3:64550952-64550971 None:intergenic 20.0%
!!! AAAAGCTTGAATTTTTCATT+TGG + chr7_3:64550995-64551014 Msa1116750:three_prime_UTR 20.0%
!!! AAAGCTTGAATTTTTCATTT+GGG + chr7_3:64550996-64551015 Msa1116750:three_prime_UTR 20.0%
!! AGTTACTATTATAACATCTA+TGG + chr7_3:64551098-64551117 Msa1116750:three_prime_UTR 20.0%
! ATAAGTTTAATCTCAAAGGT+TGG - chr7_3:64549258-64549277 None:intergenic 25.0%
! ACGTATAAGTTTAATCTCAA+AGG - chr7_3:64549262-64549281 None:intergenic 25.0%
! GAGAAAGAACACAATAATAA+TGG - chr7_3:64549465-64549484 None:intergenic 25.0%
!!! TTTGCTTTGTTTATGATGTT+GGG + chr7_3:64549619-64549638 Msa1116750:intron 25.0%
! AAAACACCTATGTTAAAGTT+CGG - chr7_3:64549658-64549677 None:intergenic 25.0%
!!! TGTAATATTTTTTTGTGGGT+TGG + chr7_3:64549709-64549728 Msa1116750:intron 25.0%
!! AGTTTCTTCTTTTTATGTGT+TGG + chr7_3:64549765-64549784 Msa1116750:intron 25.0%
! TCATTATGTGTCACAATAAT+TGG + chr7_3:64549822-64549841 Msa1116750:intron 25.0%
! CATTATGTGTCACAATAATT+GGG + chr7_3:64549823-64549842 Msa1116750:intron 25.0%
! TTCAGAAAATGAATCTCAAT+GGG + chr7_3:64550159-64550178 Msa1116750:CDS 25.0%
! ACAATTTCTGTTGTACTTAA+TGG - chr7_3:64550205-64550224 None:intergenic 25.0%
!! TCTATGATACATTTTGTAGA+AGG + chr7_3:64550284-64550303 Msa1116750:CDS 25.0%
!!! TTAAGATTTTTTTCCCCTTT+TGG - chr7_3:64550721-64550740 None:intergenic 25.0%
! AAAGGGGAAAAAAATCTTAA+AGG + chr7_3:64550721-64550740 Msa1116750:CDS 25.0%
! TGTTAAACTTCTTTACCTTA+AGG + chr7_3:64550846-64550865 Msa1116750:CDS 25.0%
!! TTCAAGCTTTTGTTAAGTAA+GGG - chr7_3:64550986-64551005 None:intergenic 25.0%
!! ATTCAAGCTTTTGTTAAGTA+AGG - chr7_3:64550987-64551006 None:intergenic 25.0%
! TACTATTATAACATCTATGG+TGG + chr7_3:64551101-64551120 Msa1116750:three_prime_UTR 25.0%
! ATAAGTTTAATCTCAAAGGT+TGG - chr7_3:64549258-64549277 None:intergenic 25.0%
! ACGTATAAGTTTAATCTCAA+AGG - chr7_3:64549262-64549281 None:intergenic 25.0%
! GAGAAAGAACACAATAATAA+TGG - chr7_3:64549465-64549484 None:intergenic 25.0%
!!! TTTGCTTTGTTTATGATGTT+GGG + chr7_3:64549619-64549638 Msa1116750:intron 25.0%
! AAAACACCTATGTTAAAGTT+CGG - chr7_3:64549658-64549677 None:intergenic 25.0%
!!! TGTAATATTTTTTTGTGGGT+TGG + chr7_3:64549709-64549728 Msa1116750:intron 25.0%
!! AGTTTCTTCTTTTTATGTGT+TGG + chr7_3:64549765-64549784 Msa1116750:intron 25.0%
! TCATTATGTGTCACAATAAT+TGG + chr7_3:64549822-64549841 Msa1116750:intron 25.0%
! CATTATGTGTCACAATAATT+GGG + chr7_3:64549823-64549842 Msa1116750:intron 25.0%
! TTCAGAAAATGAATCTCAAT+GGG + chr7_3:64550159-64550178 Msa1116750:CDS 25.0%
! ACAATTTCTGTTGTACTTAA+TGG - chr7_3:64550205-64550224 None:intergenic 25.0%
!! TCTATGATACATTTTGTAGA+AGG + chr7_3:64550284-64550303 Msa1116750:CDS 25.0%
!!! TTAAGATTTTTTTCCCCTTT+TGG - chr7_3:64550721-64550740 None:intergenic 25.0%
! AAAGGGGAAAAAAATCTTAA+AGG + chr7_3:64550721-64550740 Msa1116750:CDS 25.0%
! TGTTAAACTTCTTTACCTTA+AGG + chr7_3:64550846-64550865 Msa1116750:CDS 25.0%
!! TTCAAGCTTTTGTTAAGTAA+GGG - chr7_3:64550986-64551005 None:intergenic 25.0%
!! ATTCAAGCTTTTGTTAAGTA+AGG - chr7_3:64550987-64551006 None:intergenic 25.0%
! TACTATTATAACATCTATGG+TGG + chr7_3:64551101-64551120 Msa1116750:three_prime_UTR 25.0%
AGTAAAGAAGAAGAAGAAGA+AGG - chr7_3:64549207-64549226 None:intergenic 30.0%
GGTGTATTAATTGAAGAGAA+GGG - chr7_3:64549234-64549253 None:intergenic 30.0%
TGGTGTATTAATTGAAGAGA+AGG - chr7_3:64549235-64549254 None:intergenic 30.0%
AAGAGGAATAGAAAAAACGT+TGG - chr7_3:64549359-64549378 None:intergenic 30.0%
!! GTTTGCTTTGTTTATGATGT+TGG + chr7_3:64549618-64549637 Msa1116750:intron 30.0%
AAAGTTCCGAACTTTAACAT+AGG + chr7_3:64549649-64549668 Msa1116750:intron 30.0%
!! TATGTGTTGGTTTCTTGTTA+TGG + chr7_3:64549778-64549797 Msa1116750:intron 30.0%
! GGTTTCTTGTTATGGTAAAT+TGG + chr7_3:64549786-64549805 Msa1116750:intron 30.0%
ATAAACACGATTGAATAGAC+CGG - chr7_3:64550128-64550147 None:intergenic 30.0%
!! GATTCATTTTCTGAAGATGA+TGG - chr7_3:64550154-64550173 None:intergenic 30.0%
CTTCAGAAAATGAATCTCAA+TGG + chr7_3:64550158-64550177 Msa1116750:CDS 30.0%
TCAGAAAATGAATCTCAATG+GGG + chr7_3:64550160-64550179 Msa1116750:CDS 30.0%
AAAGTTTATGTTTACATGGC+AGG + chr7_3:64550451-64550470 Msa1116750:CDS 30.0%
ATTCTTCTTCATCCTTTGTT+TGG + chr7_3:64550559-64550578 Msa1116750:CDS 30.0%
!! GATTCTGAAATGAGATTAGA+TGG + chr7_3:64550598-64550617 Msa1116750:CDS 30.0%
TTAGATTACAAGATCGTGAT+TGG + chr7_3:64550632-64550651 Msa1116750:CDS 30.0%
! GTTTGGATCTTTTACAAGAT+TGG + chr7_3:64550782-64550801 Msa1116750:CDS 30.0%
! TCTTTTACAAGATTGGCAAT+TGG + chr7_3:64550789-64550808 Msa1116750:CDS 30.0%
TAAACTTCTTTACCTTAAGG+AGG + chr7_3:64550849-64550868 Msa1116750:CDS 30.0%
TGATCATTTCTATTGCCTTA+TGG + chr7_3:64550903-64550922 Msa1116750:CDS 30.0%
TTGTTAAGTAAGGGTGAAAA+GGG - chr7_3:64550977-64550996 None:intergenic 30.0%
TTTGTTAAGTAAGGGTGAAA+AGG - chr7_3:64550978-64550997 None:intergenic 30.0%
! TTCTTTTCTTCTCCAAGTAA+TGG + chr7_3:64551050-64551069 Msa1116750:three_prime_UTR 30.0%
TCAGTAATTAGTACTACAAG+AGG - chr7_3:64551194-64551213 None:intergenic 30.0%
ACTAATTACTGAATGTGACA+TGG + chr7_3:64551202-64551221 Msa1116750:three_prime_UTR 30.0%
! GAAGGTATGAAAGAAACAAA+AGG - chr7_3:64549189-64549208 None:intergenic 30.0%
AGTAAAGAAGAAGAAGAAGA+AGG - chr7_3:64549207-64549226 None:intergenic 30.0%
GGTGTATTAATTGAAGAGAA+GGG - chr7_3:64549234-64549253 None:intergenic 30.0%
TGGTGTATTAATTGAAGAGA+AGG - chr7_3:64549235-64549254 None:intergenic 30.0%
AAGAGGAATAGAAAAAACGT+TGG - chr7_3:64549359-64549378 None:intergenic 30.0%
!! GTTTGCTTTGTTTATGATGT+TGG + chr7_3:64549618-64549637 Msa1116750:intron 30.0%
AAAGTTCCGAACTTTAACAT+AGG + chr7_3:64549649-64549668 Msa1116750:intron 30.0%
!! TATGTGTTGGTTTCTTGTTA+TGG + chr7_3:64549778-64549797 Msa1116750:intron 30.0%
! GGTTTCTTGTTATGGTAAAT+TGG + chr7_3:64549786-64549805 Msa1116750:intron 30.0%
ATAAACACGATTGAATAGAC+CGG - chr7_3:64550128-64550147 None:intergenic 30.0%
!! GATTCATTTTCTGAAGATGA+TGG - chr7_3:64550154-64550173 None:intergenic 30.0%
CTTCAGAAAATGAATCTCAA+TGG + chr7_3:64550158-64550177 Msa1116750:CDS 30.0%
TCAGAAAATGAATCTCAATG+GGG + chr7_3:64550160-64550179 Msa1116750:CDS 30.0%
AAAGTTTATGTTTACATGGC+AGG + chr7_3:64550451-64550470 Msa1116750:CDS 30.0%
ATTCTTCTTCATCCTTTGTT+TGG + chr7_3:64550559-64550578 Msa1116750:CDS 30.0%
!! GATTCTGAAATGAGATTAGA+TGG + chr7_3:64550598-64550617 Msa1116750:CDS 30.0%
TTAGATTACAAGATCGTGAT+TGG + chr7_3:64550632-64550651 Msa1116750:CDS 30.0%
! GTTTGGATCTTTTACAAGAT+TGG + chr7_3:64550782-64550801 Msa1116750:CDS 30.0%
! TCTTTTACAAGATTGGCAAT+TGG + chr7_3:64550789-64550808 Msa1116750:CDS 30.0%
TAAACTTCTTTACCTTAAGG+AGG + chr7_3:64550849-64550868 Msa1116750:CDS 30.0%
TGATCATTTCTATTGCCTTA+TGG + chr7_3:64550903-64550922 Msa1116750:CDS 30.0%
TTGTTAAGTAAGGGTGAAAA+GGG - chr7_3:64550977-64550996 None:intergenic 30.0%
TTTGTTAAGTAAGGGTGAAA+AGG - chr7_3:64550978-64550997 None:intergenic 30.0%
! TTCTTTTCTTCTCCAAGTAA+TGG + chr7_3:64551050-64551069 Msa1116750:three_prime_UTR 30.0%
TCAGTAATTAGTACTACAAG+AGG - chr7_3:64551194-64551213 None:intergenic 30.0%
ACTAATTACTGAATGTGACA+TGG + chr7_3:64551202-64551221 Msa1116750:three_prime_UTR 30.0%
AGTTTAATCTCAAAGGTTGG+TGG - chr7_3:64549255-64549274 None:intergenic 35.0%
! TGTAGAGATAAAAGTGTACG+TGG - chr7_3:64549300-64549319 None:intergenic 35.0%
!! AAGTGATGTGGGTTAGAAAA+GGG - chr7_3:64549325-64549344 None:intergenic 35.0%
ATATTACCCTAGATTCACTG+AGG - chr7_3:64549529-64549548 None:intergenic 35.0%
!! GTGGGTTGGTTAGTTTAATT+TGG + chr7_3:64549723-64549742 Msa1116750:intron 35.0%
! AATCTTCTAAGAAGAGCAGA+TGG + chr7_3:64550001-64550020 Msa1116750:CDS 35.0%
CAAGAAACTCTGCTAAATCT+CGG - chr7_3:64550036-64550055 None:intergenic 35.0%
CCATGGAAGAATACTATAAC+AGG - chr7_3:64550229-64550248 None:intergenic 35.0%
CCTGTTATAGTATTCTTCCA+TGG + chr7_3:64550226-64550245 Msa1116750:CDS 35.0%
GTTATAGTATTCTTCCATGG+CGG + chr7_3:64550229-64550248 Msa1116750:CDS 35.0%
! TTGTAAAGCAGCTGTTGTTT+CGG + chr7_3:64550318-64550337 Msa1116750:CDS 35.0%
TTTCCATGTGCTTATGAAGA+TGG + chr7_3:64550370-64550389 Msa1116750:CDS 35.0%
AATGGGTGAAGTCAAGAAAA+TGG + chr7_3:64550407-64550426 Msa1116750:CDS 35.0%
TCAAGAAAATGGCTTCAAAG+TGG + chr7_3:64550418-64550437 Msa1116750:CDS 35.0%
CAAGAAAATGGCTTCAAAGT+GGG + chr7_3:64550419-64550438 Msa1116750:CDS 35.0%
! CAGAAGGAATTGAAGTGTTA+GGG + chr7_3:64550533-64550552 Msa1116750:CDS 35.0%
!!! CTTTTTTCACCACCAAACAA+AGG - chr7_3:64550574-64550593 None:intergenic 35.0%
TACAAGATCGTGATTGGTAT+TGG + chr7_3:64550638-64550657 Msa1116750:CDS 35.0%
!! TCCTAAAAGTCTTGTTTGTG+TGG + chr7_3:64550756-64550775 Msa1116750:CDS 35.0%
! GTGGATGGTTTAAGGAATTT+TGG + chr7_3:64550817-64550836 Msa1116750:CDS 35.0%
TCATTTCTATTGCCTTATGG+AGG + chr7_3:64550906-64550925 Msa1116750:CDS 35.0%
AGTTCTTGATTTCCTCCATA+AGG - chr7_3:64550921-64550940 None:intergenic 35.0%
TTTAAGTACACGCCATTACT+TGG - chr7_3:64551065-64551084 None:intergenic 35.0%
! TCTATGGTGGTCAATTTTAG+AGG + chr7_3:64551114-64551133 Msa1116750:three_prime_UTR 35.0%
! CTATGGTGGTCAATTTTAGA+GGG + chr7_3:64551115-64551134 Msa1116750:three_prime_UTR 35.0%
!! TATGGTGGTCAATTTTAGAG+GGG + chr7_3:64551116-64551135 Msa1116750:three_prime_UTR 35.0%
GGAGATTGAAGATTAGGTAT+TGG + chr7_3:64551137-64551156 Msa1116750:three_prime_UTR 35.0%
!! GAAGATTAGGTATTGGTTGA+TGG + chr7_3:64551144-64551163 Msa1116750:three_prime_UTR 35.0%
!! TTAGGTATTGGTTGATGGTT+TGG + chr7_3:64551149-64551168 Msa1116750:three_prime_UTR 35.0%
!! TTGGTTGATGGTTTGGAATT+TGG + chr7_3:64551156-64551175 Msa1116750:three_prime_UTR 35.0%
!! TGGTTGATGGTTTGGAATTT+GGG + chr7_3:64551157-64551176 Msa1116750:three_prime_UTR 35.0%
AGTTTAATCTCAAAGGTTGG+TGG - chr7_3:64549255-64549274 None:intergenic 35.0%
! TGTAGAGATAAAAGTGTACG+TGG - chr7_3:64549300-64549319 None:intergenic 35.0%
!! AAGTGATGTGGGTTAGAAAA+GGG - chr7_3:64549325-64549344 None:intergenic 35.0%
ATATTACCCTAGATTCACTG+AGG - chr7_3:64549529-64549548 None:intergenic 35.0%
!! GTGGGTTGGTTAGTTTAATT+TGG + chr7_3:64549723-64549742 Msa1116750:intron 35.0%
! AATCTTCTAAGAAGAGCAGA+TGG + chr7_3:64550001-64550020 Msa1116750:CDS 35.0%
CAAGAAACTCTGCTAAATCT+CGG - chr7_3:64550036-64550055 None:intergenic 35.0%
CCATGGAAGAATACTATAAC+AGG - chr7_3:64550229-64550248 None:intergenic 35.0%
CCTGTTATAGTATTCTTCCA+TGG + chr7_3:64550226-64550245 Msa1116750:CDS 35.0%
GTTATAGTATTCTTCCATGG+CGG + chr7_3:64550229-64550248 Msa1116750:CDS 35.0%
! TTGTAAAGCAGCTGTTGTTT+CGG + chr7_3:64550318-64550337 Msa1116750:CDS 35.0%
TTTCCATGTGCTTATGAAGA+TGG + chr7_3:64550370-64550389 Msa1116750:CDS 35.0%
AATGGGTGAAGTCAAGAAAA+TGG + chr7_3:64550407-64550426 Msa1116750:CDS 35.0%
TCAAGAAAATGGCTTCAAAG+TGG + chr7_3:64550418-64550437 Msa1116750:CDS 35.0%
CAAGAAAATGGCTTCAAAGT+GGG + chr7_3:64550419-64550438 Msa1116750:CDS 35.0%
! CAGAAGGAATTGAAGTGTTA+GGG + chr7_3:64550533-64550552 Msa1116750:CDS 35.0%
!!! CTTTTTTCACCACCAAACAA+AGG - chr7_3:64550574-64550593 None:intergenic 35.0%
TACAAGATCGTGATTGGTAT+TGG + chr7_3:64550638-64550657 Msa1116750:CDS 35.0%
!! TCCTAAAAGTCTTGTTTGTG+TGG + chr7_3:64550756-64550775 Msa1116750:CDS 35.0%
! GTGGATGGTTTAAGGAATTT+TGG + chr7_3:64550817-64550836 Msa1116750:CDS 35.0%
TCATTTCTATTGCCTTATGG+AGG + chr7_3:64550906-64550925 Msa1116750:CDS 35.0%
AGTTCTTGATTTCCTCCATA+AGG - chr7_3:64550921-64550940 None:intergenic 35.0%
TTTAAGTACACGCCATTACT+TGG - chr7_3:64551065-64551084 None:intergenic 35.0%
! TCTATGGTGGTCAATTTTAG+AGG + chr7_3:64551114-64551133 Msa1116750:three_prime_UTR 35.0%
! CTATGGTGGTCAATTTTAGA+GGG + chr7_3:64551115-64551134 Msa1116750:three_prime_UTR 35.0%
!! TATGGTGGTCAATTTTAGAG+GGG + chr7_3:64551116-64551135 Msa1116750:three_prime_UTR 35.0%
GGAGATTGAAGATTAGGTAT+TGG + chr7_3:64551137-64551156 Msa1116750:three_prime_UTR 35.0%
!! GAAGATTAGGTATTGGTTGA+TGG + chr7_3:64551144-64551163 Msa1116750:three_prime_UTR 35.0%
!! TTAGGTATTGGTTGATGGTT+TGG + chr7_3:64551149-64551168 Msa1116750:three_prime_UTR 35.0%
!! TTGGTTGATGGTTTGGAATT+TGG + chr7_3:64551156-64551175 Msa1116750:three_prime_UTR 35.0%
!! TGGTTGATGGTTTGGAATTT+GGG + chr7_3:64551157-64551176 Msa1116750:three_prime_UTR 35.0%
!! GAAGTGATGTGGGTTAGAAA+AGG - chr7_3:64549326-64549345 None:intergenic 40.0%
TGAAAGAGTCGAAGTGATGT+GGG - chr7_3:64549336-64549355 None:intergenic 40.0%
CATGGAGAAGAGAACAAAAG+AGG - chr7_3:64549376-64549395 None:intergenic 40.0%
! CTTTTGTTCTCTTCTCCATG+AGG + chr7_3:64549376-64549395 Msa1116750:five_prime_UTR 40.0%
AGAAGAAAGAGTGAACCTCA+TGG - chr7_3:64549394-64549413 None:intergenic 40.0%
AACAACTAACCAGACATGAC+TGG + chr7_3:64549488-64549507 Msa1116750:exon 40.0%
! TTCACTGAGGTTGACTTCAT+TGG - chr7_3:64549516-64549535 None:intergenic 40.0%
AAGTCAACCTCAGTGAATCT+AGG + chr7_3:64549519-64549538 Msa1116750:CDS 40.0%
AGTCAACCTCAGTGAATCTA+GGG + chr7_3:64549520-64549539 Msa1116750:CDS 40.0%
GTTTCTTGACAGAAAAGTCC+CGG + chr7_3:64550048-64550067 Msa1116750:CDS 40.0%
AATGAAAAGACTCCATCGAC+CGG - chr7_3:64550085-64550104 None:intergenic 40.0%
GATCATATCGAACGAAACAC+CGG + chr7_3:64550106-64550125 Msa1116750:CDS 40.0%
TGTAGCAGTAAAAGCTTGTG+AGG + chr7_3:64550504-64550523 Msa1116750:CDS 40.0%
! GCAGAAGGAATTGAAGTGTT+AGG + chr7_3:64550532-64550551 Msa1116750:CDS 40.0%
! CTTCTTCATCCTTTGTTTGG+TGG + chr7_3:64550562-64550581 Msa1116750:CDS 40.0%
!!! TGGAGAGCTTTTTTACCAGA+AGG + chr7_3:64550658-64550677 Msa1116750:CDS 40.0%
! TTTTCCCCTTTTGGACCAAA+CGG - chr7_3:64550712-64550731 None:intergenic 40.0%
! GCCACACAAACAAGACTTTT+AGG - chr7_3:64550760-64550779 None:intergenic 40.0%
!! AAAAGTCTTGTTTGTGTGGC+TGG + chr7_3:64550760-64550779 Msa1116750:CDS 40.0%
! AGATTGGCAATTGGCTTATG+TGG + chr7_3:64550798-64550817 Msa1116750:CDS 40.0%
TGGCTTATGTGGATGGTTTA+AGG + chr7_3:64550809-64550828 Msa1116750:CDS 40.0%
TACCTTAAGGAGGCTACTAT+TGG + chr7_3:64550859-64550878 Msa1116750:CDS 40.0%
AACCAATAGTAGCCTCCTTA+AGG - chr7_3:64550864-64550883 None:intergenic 40.0%
TAGAGGGGAGATTGAAGATT+AGG + chr7_3:64551131-64551150 Msa1116750:three_prime_UTR 40.0%
!! GGTTGATGGTTTGGAATTTG+GGG + chr7_3:64551158-64551177 Msa1116750:three_prime_UTR 40.0%
!! GAAGTGATGTGGGTTAGAAA+AGG - chr7_3:64549326-64549345 None:intergenic 40.0%
TGAAAGAGTCGAAGTGATGT+GGG - chr7_3:64549336-64549355 None:intergenic 40.0%
CATGGAGAAGAGAACAAAAG+AGG - chr7_3:64549376-64549395 None:intergenic 40.0%
! CTTTTGTTCTCTTCTCCATG+AGG + chr7_3:64549376-64549395 Msa1116750:five_prime_UTR 40.0%
AGAAGAAAGAGTGAACCTCA+TGG - chr7_3:64549394-64549413 None:intergenic 40.0%
AACAACTAACCAGACATGAC+TGG + chr7_3:64549488-64549507 Msa1116750:exon 40.0%
! TTCACTGAGGTTGACTTCAT+TGG - chr7_3:64549516-64549535 None:intergenic 40.0%
AAGTCAACCTCAGTGAATCT+AGG + chr7_3:64549519-64549538 Msa1116750:CDS 40.0%
AGTCAACCTCAGTGAATCTA+GGG + chr7_3:64549520-64549539 Msa1116750:CDS 40.0%
GTTTCTTGACAGAAAAGTCC+CGG + chr7_3:64550048-64550067 Msa1116750:CDS 40.0%
AATGAAAAGACTCCATCGAC+CGG - chr7_3:64550085-64550104 None:intergenic 40.0%
GATCATATCGAACGAAACAC+CGG + chr7_3:64550106-64550125 Msa1116750:CDS 40.0%
TGTAGCAGTAAAAGCTTGTG+AGG + chr7_3:64550504-64550523 Msa1116750:CDS 40.0%
! GCAGAAGGAATTGAAGTGTT+AGG + chr7_3:64550532-64550551 Msa1116750:CDS 40.0%
! CTTCTTCATCCTTTGTTTGG+TGG + chr7_3:64550562-64550581 Msa1116750:CDS 40.0%
!!! TGGAGAGCTTTTTTACCAGA+AGG + chr7_3:64550658-64550677 Msa1116750:CDS 40.0%
! TTTTCCCCTTTTGGACCAAA+CGG - chr7_3:64550712-64550731 None:intergenic 40.0%
! GCCACACAAACAAGACTTTT+AGG - chr7_3:64550760-64550779 None:intergenic 40.0%
!! AAAAGTCTTGTTTGTGTGGC+TGG + chr7_3:64550760-64550779 Msa1116750:CDS 40.0%
! AGATTGGCAATTGGCTTATG+TGG + chr7_3:64550798-64550817 Msa1116750:CDS 40.0%
TGGCTTATGTGGATGGTTTA+AGG + chr7_3:64550809-64550828 Msa1116750:CDS 40.0%
TACCTTAAGGAGGCTACTAT+TGG + chr7_3:64550859-64550878 Msa1116750:CDS 40.0%
AACCAATAGTAGCCTCCTTA+AGG - chr7_3:64550864-64550883 None:intergenic 40.0%
TAGAGGGGAGATTGAAGATT+AGG + chr7_3:64551131-64551150 Msa1116750:three_prime_UTR 40.0%
!! GGTTGATGGTTTGGAATTTG+GGG + chr7_3:64551158-64551177 Msa1116750:three_prime_UTR 40.0%
! GATAAAAGTGTACGTGGCGT+AGG - chr7_3:64549294-64549313 None:intergenic 45.0%
GTGAAAGAGTCGAAGTGATG+TGG - chr7_3:64549337-64549356 None:intergenic 45.0%
TCATTGGTACCAGTCATGTC+TGG - chr7_3:64549500-64549519 None:intergenic 45.0%
GGTTAATTACCGACGATCAC+CGG + chr7_3:64550339-64550358 Msa1116750:CDS 45.0%
CAGCCATCTTCATAAGCACA+TGG - chr7_3:64550376-64550395 None:intergenic 45.0%
CATGTGCTTATGAAGATGGC+TGG + chr7_3:64550374-64550393 Msa1116750:CDS 45.0%
ATGGCTGGAATGCACTCAAA+TGG + chr7_3:64550389-64550408 Msa1116750:CDS 45.0%
TGGCTGGAATGCACTCAAAT+GGG + chr7_3:64550390-64550409 Msa1116750:CDS 45.0%
TACATGGCAGGTGATAGTTC+TGG + chr7_3:64550463-64550482 Msa1116750:CDS 45.0%
GCTTGTGAGGAAAAAGCAGA+AGG + chr7_3:64550517-64550536 Msa1116750:CDS 45.0%
TGGTCTCTATCTTCACCTTC+TGG - chr7_3:64550676-64550695 None:intergenic 45.0%
TGTAACCCGTTTGGTCCAAA+AGG + chr7_3:64550703-64550722 Msa1116750:CDS 45.0%
GTAACCCGTTTGGTCCAAAA+GGG + chr7_3:64550704-64550723 Msa1116750:CDS 45.0%
TAACCCGTTTGGTCCAAAAG+GGG + chr7_3:64550705-64550724 Msa1116750:CDS 45.0%
! TTTCCCCTTTTGGACCAAAC+GGG - chr7_3:64550711-64550730 None:intergenic 45.0%
! TCTTGTTTGTGTGGCTGGTT+TGG + chr7_3:64550765-64550784 Msa1116750:CDS 45.0%
! TGGCAATTGGCTTATGTGGA+TGG + chr7_3:64550802-64550821 Msa1116750:CDS 45.0%
! GATAAAAGTGTACGTGGCGT+AGG - chr7_3:64549294-64549313 None:intergenic 45.0%
GTGAAAGAGTCGAAGTGATG+TGG - chr7_3:64549337-64549356 None:intergenic 45.0%
TCATTGGTACCAGTCATGTC+TGG - chr7_3:64549500-64549519 None:intergenic 45.0%
GGTTAATTACCGACGATCAC+CGG + chr7_3:64550339-64550358 Msa1116750:CDS 45.0%
CAGCCATCTTCATAAGCACA+TGG - chr7_3:64550376-64550395 None:intergenic 45.0%
CATGTGCTTATGAAGATGGC+TGG + chr7_3:64550374-64550393 Msa1116750:CDS 45.0%
ATGGCTGGAATGCACTCAAA+TGG + chr7_3:64550389-64550408 Msa1116750:CDS 45.0%
TGGCTGGAATGCACTCAAAT+GGG + chr7_3:64550390-64550409 Msa1116750:CDS 45.0%
TACATGGCAGGTGATAGTTC+TGG + chr7_3:64550463-64550482 Msa1116750:CDS 45.0%
GCTTGTGAGGAAAAAGCAGA+AGG + chr7_3:64550517-64550536 Msa1116750:CDS 45.0%
TGGTCTCTATCTTCACCTTC+TGG - chr7_3:64550676-64550695 None:intergenic 45.0%
TGTAACCCGTTTGGTCCAAA+AGG + chr7_3:64550703-64550722 Msa1116750:CDS 45.0%
GTAACCCGTTTGGTCCAAAA+GGG + chr7_3:64550704-64550723 Msa1116750:CDS 45.0%
TAACCCGTTTGGTCCAAAAG+GGG + chr7_3:64550705-64550724 Msa1116750:CDS 45.0%
! TTTCCCCTTTTGGACCAAAC+GGG - chr7_3:64550711-64550730 None:intergenic 45.0%
! TCTTGTTTGTGTGGCTGGTT+TGG + chr7_3:64550765-64550784 Msa1116750:CDS 45.0%
! TGGCAATTGGCTTATGTGGA+TGG + chr7_3:64550802-64550821 Msa1116750:CDS 45.0%
! AAAAGTGTACGTGGCGTAGG+TGG - chr7_3:64549291-64549310 None:intergenic 50.0%
AGTCCCGGCAAATGCTATTC+CGG + chr7_3:64550063-64550082 Msa1116750:CDS 50.0%
TCGACCGGAATAGCATTTGC+CGG - chr7_3:64550070-64550089 None:intergenic 50.0%
GCAAATGCTATTCCGGTCGA+TGG + chr7_3:64550070-64550089 Msa1116750:CDS 50.0%
AATGAGAGAAGCTTCCGCCA+TGG - chr7_3:64550246-64550265 None:intergenic 50.0%
GCACATGGAAACCGATACTC+CGG - chr7_3:64550361-64550380 None:intergenic 50.0%
!! ATGGCAGGTGATAGTTCTGG+TGG + chr7_3:64550466-64550485 Msa1116750:CDS 50.0%
!! GACCAAACGGGTTACAAGCA+GGG - chr7_3:64550699-64550718 None:intergenic 50.0%
! AAAAGTGTACGTGGCGTAGG+TGG - chr7_3:64549291-64549310 None:intergenic 50.0%
AGTCCCGGCAAATGCTATTC+CGG + chr7_3:64550063-64550082 Msa1116750:CDS 50.0%
TCGACCGGAATAGCATTTGC+CGG - chr7_3:64550070-64550089 None:intergenic 50.0%
GCAAATGCTATTCCGGTCGA+TGG + chr7_3:64550070-64550089 Msa1116750:CDS 50.0%
AATGAGAGAAGCTTCCGCCA+TGG - chr7_3:64550246-64550265 None:intergenic 50.0%
GCACATGGAAACCGATACTC+CGG - chr7_3:64550361-64550380 None:intergenic 50.0%
!! ATGGCAGGTGATAGTTCTGG+TGG + chr7_3:64550466-64550485 Msa1116750:CDS 50.0%
!! GACCAAACGGGTTACAAGCA+GGG - chr7_3:64550699-64550718 None:intergenic 50.0%
CGACCGGAATAGCATTTGCC+GGG - chr7_3:64550069-64550088 None:intergenic 55.0%
ACCGACGATCACCGGAGTAT+CGG + chr7_3:64550347-64550366 Msa1116750:CDS 55.0%
ACCGATACTCCGGTGATCGT+CGG - chr7_3:64550351-64550370 None:intergenic 55.0%
!! CAAACGGGTTACAAGCAGGG+TGG - chr7_3:64550696-64550715 None:intergenic 55.0%
CACCCTGCTTGTAACCCGTT+TGG + chr7_3:64550694-64550713 Msa1116750:CDS 55.0%
!! GGACCAAACGGGTTACAAGC+AGG - chr7_3:64550700-64550719 None:intergenic 55.0%
CGACCGGAATAGCATTTGCC+GGG - chr7_3:64550069-64550088 None:intergenic 55.0%
ACCGACGATCACCGGAGTAT+CGG + chr7_3:64550347-64550366 Msa1116750:CDS 55.0%
ACCGATACTCCGGTGATCGT+CGG - chr7_3:64550351-64550370 None:intergenic 55.0%
!! CAAACGGGTTACAAGCAGGG+TGG - chr7_3:64550696-64550715 None:intergenic 55.0%
CACCCTGCTTGTAACCCGTT+TGG + chr7_3:64550694-64550713 Msa1116750:CDS 55.0%
!! GGACCAAACGGGTTACAAGC+AGG - chr7_3:64550700-64550719 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 64549187 64551236 64549187 ID=Msa1116750;Name=Msa1116750
chr7_3 mRNA 64549187 64551236 64549187 ID=Msa1116750-mRNA-1;Parent=Msa1116750;Name=Msa1116750-mRNA-1;_AED=0.00;_eAED=0.00;_QI=316|1|1|1|1|1|2|276|350
chr7_3 exon 64549187 64549541 64549187 ID=Msa1116750-mRNA-1:exon:15273;Parent=Msa1116750-mRNA-1
chr7_3 exon 64549947 64551236 64549947 ID=Msa1116750-mRNA-1:exon:15274;Parent=Msa1116750-mRNA-1
chr7_3 five_prime_UTR 64549187 64549502 64549187 ID=Msa1116750-mRNA-1:five_prime_utr;Parent=Msa1116750-mRNA-1
chr7_3 CDS 64549503 64549541 64549503 ID=Msa1116750-mRNA-1:cds;Parent=Msa1116750-mRNA-1
chr7_3 CDS 64549947 64550960 64549947 ID=Msa1116750-mRNA-1:cds;Parent=Msa1116750-mRNA-1
chr7_3 three_prime_UTR 64550961 64551236 64550961 ID=Msa1116750-mRNA-1:three_prime_utr;Parent=Msa1116750-mRNA-1
Gene Sequence

>Msa1116750

ATGACTGGTACCAATGAAGTCAACCTCAGTGAATCTAGGAGTGTTGTTCCATTGAATACATATGTTCTTATCTCAAATTTCAAACTTGCTTACAATCTTCTAAGAAGAGCAGATGGAACATTCAACCGAGATTTAGCAGAGTTTCTTGACAGAAAAGTCCCGGCAAATGCTATTCCGGTCGATGGAGTCTTTTCATTCGATCATATCGAACGAAACACCGGTCTATTCAATCGTGTTTATCTACCATCATCTTCAGAAAATGAATCTCAATGGGGTGTCAAAGATTTAGAGAAACCATTAAGTACAACAGAAATTGTTCCTGTTATAGTATTCTTCCATGGCGGAAGCTTCTCTCATTCTTCAGCAAATAGTGCTATCTATGATACATTTTGTAGAAGGTTAGTAAGTGTTTGTAAAGCAGCTGTTGTTTCGGTTAATTACCGACGATCACCGGAGTATCGGTTTCCATGTGCTTATGAAGATGGCTGGAATGCACTCAAATGGGTGAAGTCAAGAAAATGGCTTCAAAGTGGGAAAGAAAAGAAAGTTTATGTTTACATGGCAGGTGATAGTTCTGGTGGAAACATTGTTCATCATGTAGCAGTAAAAGCTTGTGAGGAAAAAGCAGAAGGAATTGAAGTGTTAGGGAACATTCTTCTTCATCCTTTGTTTGGTGGTGAAAAAAGAACAGATTCTGAAATGAGATTAGATGGAAAGTACTTTGTTAGATTACAAGATCGTGATTGGTATTGGAGAGCTTTTTTACCAGAAGGTGAAGATAGAGACCACCCTGCTTGTAACCCGTTTGGTCCAAAAGGGGAAAAAAATCTTAAAGGACTTGATAAGTTTCCTAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTTTACAAGATTGGCAATTGGCTTATGTGGATGGTTTAAGGAATTTTGGTCAAGATGTTAAACTTCTTTACCTTAAGGAGGCTACTATTGGTTTTTACTTCTTGCCTAATAATGATCATTTCTATTGCCTTATGGAGGAAATCAAGAACTTTGTTAATCCTAACTGTTAA
Protein sequence

>Msa1116750

MTGTNEVNLSESRSVVPLNTYVLISNFKLAYNLLRRADGTFNRDLAEFLDRKVPANAIPVDGVFSFDHIERNTGLFNRVYLPSSSENESQWGVKDLEKPLSTTEIVPVIVFFHGGSFSHSSANSAIYDTFCRRLVSVCKAAVVSVNYRRSPEYRFPCAYEDGWNALKWVKSRKWLQSGKEKKVYVYMAGDSSGGNIVHHVAVKACEEKAEGIEVLGNILLHPLFGGEKRTDSEMRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGEKNLKGLDKFPKSLVCVAGLDLLQDWQLAYVDGLRNFGQDVKLLYLKEATIGFYFLPNNDHFYCLMEEIKNFVNPNC*