AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0365620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365620 MtrunA17_Chr3g0105901 95.046 323 10 1 7 323 630 952 0.0 638
Msa0365620 MtrunA17_Chr5g0444511 30.415 217 107 5 4 183 427 636 4.78e-23 99.8
Msa0365620 MtrunA17_Chr3g0099361 33.696 184 105 5 4 183 501 671 4.07e-21 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365620 AT5G58510.1 60.831 337 113 6 3 323 630 963 4.87e-135 407
Msa0365620 AT5G58510.2 61.062 226 79 3 3 222 630 852 4.84e-92 292
Msa0365620 AT5G55060.3 36.842 190 82 6 4 183 322 483 1.68e-25 107
Msa0365620 AT5G55060.2 36.842 190 82 6 4 183 322 483 1.68e-25 107
Msa0365620 AT5G55060.1 36.842 190 82 6 4 183 415 576 2.94e-25 106

Find 196 sgRNAs with CRISPR-Local

Find 864 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAACTTTGTTCTAGGTAAA+AGG 0.153890 3_1:+59829078 Msa0365620:intron
CAAGCCTGCAAATTGGAATT+TGG 0.195936 3_1:+59829296 Msa0365620:five_prime_UTR
ATTTCACCCTTGCTTCTTCC+TGG 0.232958 3_1:+59828089 Msa0365620:five_prime_UTR
ATTAATTTGATGTTGTTTAT+TGG 0.249300 3_1:+59840694 Msa0365620:exon
TCCAATAAAACTTATGCATT+TGG 0.259281 3_1:+59829749 Msa0365620:five_prime_UTR
GAGACAGGAACTCACAAATT+TGG 0.279202 3_1:-59829796 None:intergenic
CCTTCTCGGAAAGCTTATAT+TGG 0.286136 3_1:+59829663 Msa0365620:five_prime_UTR
TTCAAGCTTGCTCCCATTGT+TGG 0.287724 3_1:-59840255 None:intergenic
TCATAACAATTACCTTTAAC+AGG 0.293198 3_1:-59830543 None:intergenic
TGACCTACGTGTTGCACTTT+CGG 0.295352 3_1:+59840659 Msa0365620:CDS
TAGAGGCTGTTTGCCGGCTT+TGG 0.301802 3_1:+59828566 Msa0365620:five_prime_UTR
GAAATTTGTGGAGAAAGATT+TGG 0.305936 3_1:+59838431 Msa0365620:CDS
TCTGCAGAAGATCCTGTTAA+AGG 0.306445 3_1:+59830531 Msa0365620:five_prime_UTR
CATTGAGGATTTCAAATTAT+CGG 0.306833 3_1:-59831995 None:intergenic
GCAGTTCTCTTGGAGTATTC+TGG 0.306853 3_1:+59829102 Msa0365620:five_prime_UTR
TTGACAACACTTCTCTTTCA+TGG 0.308470 3_1:-59840434 None:intergenic
AAATCCAAATTCCAATTTGC+AGG 0.320981 3_1:-59829300 None:intergenic
TTCTATGGAAATGGCTGAAC+TGG 0.322774 3_1:+59831225 Msa0365620:five_prime_UTR
TGTTTACATTCTCTTTGGTT+TGG 0.330319 3_1:+59833877 Msa0365620:five_prime_UTR
CACGATCTGCAGTTATGTTT+CGG 0.330557 3_1:+59829324 Msa0365620:five_prime_UTR
TCAGATGAATGAAGATTATC+AGG 0.342556 3_1:+59834554 Msa0365620:five_prime_UTR
AAATCTGAAGAAAATCTTAC+TGG 0.346213 3_1:+59830453 Msa0365620:five_prime_UTR
TTCCAGTTCACGATCCTTCT+CGG 0.355995 3_1:+59829649 Msa0365620:five_prime_UTR
CTCCCACAGCTAACCAATCT+TGG 0.357096 3_1:+59840469 Msa0365620:CDS
ACGCAGGCAAGCCTGCAAAT+TGG 0.358232 3_1:+59829289 Msa0365620:five_prime_UTR
CTGAAATAGAGGCTGTTTGC+CGG 0.364549 3_1:+59828560 Msa0365620:five_prime_UTR
TCAAAACCTTTCTCCAAGAT+TGG 0.364616 3_1:-59840482 None:intergenic
AGTTCACCTGTCAACTTTCC+CGG 0.366304 3_1:-59834802 None:intergenic
GAAGATGGTTGAAAGTTCTA+TGG 0.366567 3_1:+59831210 Msa0365620:five_prime_UTR
AGAAGTGGTTGATCTCTCTA+AGG 0.374421 3_1:+59831272 Msa0365620:five_prime_UTR
ACATCAATTGCTTGAACAAA+TGG 0.382687 3_1:+59839869 Msa0365620:CDS
TTCGAGAGGTTAGGTGGTGT+TGG 0.390276 3_1:+59834096 Msa0365620:five_prime_UTR
TTCTTCCATGTCTTCAACTT+CGG 0.394276 3_1:-59827945 None:intergenic
AGCAGATCGCATTGGTAGTC+AGG 0.397737 3_1:+59829725 Msa0365620:five_prime_UTR
TGTCAGCCATTTCTGTGCTA+TGG 0.399482 3_1:+59834063 Msa0365620:intron
AATGGGATGATGATTGTTCT+TGG 0.400326 3_1:+59830496 Msa0365620:five_prime_UTR
TAACTTTGTTCTAGGTAAAA+GGG 0.401392 3_1:+59829079 Msa0365620:intron
GAAAGAAGAGGTTGTTGAAA+AGG 0.405819 3_1:+59840275 Msa0365620:CDS
CTACCATGGCATCTGCTTTG+AGG 0.406678 3_1:+59839985 Msa0365620:CDS
CCCTTGCTTCTTCCTGGGAA+CGG 0.416166 3_1:+59828095 Msa0365620:five_prime_UTR
TTATACAGGTCTGTAACTTC+AGG 0.416188 3_1:-59836159 None:intergenic
GGTGGCATTCACCTGGAGAT+TGG 0.417522 3_1:+59838290 Msa0365620:CDS
TAAGACTTCGCGATCTGTAA+AGG 0.418442 3_1:+59833822 Msa0365620:five_prime_UTR
AGGTAGGATCTTCGTCTTGC+CGG 0.420190 3_1:-59827897 None:intergenic
CTCTATCCATAGCACAGAAA+TGG 0.420200 3_1:-59834069 None:intergenic
GGTAAAAGGGGCAGTTCTCT+TGG 0.422286 3_1:+59829092 Msa0365620:intron
CGATAATTTGAAATCCTCAA+TGG 0.428406 3_1:+59831996 Msa0365620:five_prime_UTR
TGGGCACTGTATTCACTAGA+AGG 0.428991 3_1:+59829697 Msa0365620:five_prime_UTR
CACAATATGGTCAGAGAAGA+TGG 0.429747 3_1:+59831195 Msa0365620:five_prime_UTR
CATCAACAAGAAGATGCAAC+TGG 0.432513 3_1:-59831779 None:intergenic
ATGTTAGCTTCATTGCAATT+CGG 0.432871 3_1:-59830374 None:intergenic
TTGCTTTGTCGAATTGTTCA+AGG 0.435752 3_1:+59829528 Msa0365620:five_prime_UTR
GTGGCATTCACCTGGAGATT+GGG 0.435816 3_1:+59838291 Msa0365620:CDS
AGAGGCTTCTGTTCCGAAGC+AGG 0.442981 3_1:-59838472 None:intergenic
TTTCACCCTTGCTTCTTCCT+GGG 0.443811 3_1:+59828090 Msa0365620:five_prime_UTR
TCGAGAGGTTAGGTGGTGTT+GGG 0.444848 3_1:+59834097 Msa0365620:five_prime_UTR
CTTCGTCTTGCCGGTGTTGG+TGG 0.450440 3_1:-59827888 None:intergenic
TGTTATGTATACAGACTTGA+AGG 0.450998 3_1:+59831726 Msa0365620:intron
GTTTATTGGTCTCAAACTCA+TGG 0.451131 3_1:+59840708 Msa0365620:three_prime_UTR
AAGACTTCGCGATCTGTAAA+GGG 0.452336 3_1:+59833823 Msa0365620:five_prime_UTR
AAGTCTTCAAAAGTAGCATC+TGG 0.452459 3_1:-59838262 None:intergenic
AATAAAACTTATGCATTTGG+AGG 0.453146 3_1:+59829752 Msa0365620:five_prime_UTR
CTCACCTGCTCTTCCTGCTT+CGG 0.456403 3_1:+59838459 Msa0365620:CDS
AAAATAAGTCGAAAGATAGT+TGG 0.461931 3_1:+59838368 Msa0365620:CDS
TTCATATAGTCCTCATCAAA+GGG 0.462254 3_1:-59830408 None:intergenic
TTCCGAGAAGGATCGTGAAC+TGG 0.464690 3_1:-59829651 None:intergenic
ACGCTAAGTCAGACTAGTTA+TGG 0.464886 3_1:+59839921 Msa0365620:CDS
CTCCAAGATTGGTTAGCTGT+GGG 0.465469 3_1:-59840471 None:intergenic
CGTGTCAGCTGCCGCTCTGA+AGG 0.468088 3_1:-59839901 None:intergenic
TAGGTTTATTTCTGAAATAG+AGG 0.471512 3_1:+59828549 Msa0365620:intron
GAAAAGGATATCCTAACTTC+AGG 0.473184 3_1:+59837686 Msa0365620:five_prime_UTR
CTGAAAGAACTGTTTATTGA+AGG 0.473727 3_1:+59832051 Msa0365620:five_prime_UTR
TTTATTCGGTGGCATTCACC+TGG 0.474759 3_1:+59838283 Msa0365620:CDS
TAGAGTTTGTTCGAGAGGTT+AGG 0.477130 3_1:+59834087 Msa0365620:five_prime_UTR
TGCATTGCAAATGTCATTTG+AGG 0.478123 3_1:+59831800 Msa0365620:five_prime_UTR
AGCTAACCAATCTTGGAGAA+AGG 0.478511 3_1:+59840476 Msa0365620:CDS
TGATGCTGATCCACTGCTCT+CGG 0.481314 3_1:-59838329 None:intergenic
GCAGTTATGTTTCGGTGTAA+AGG 0.483595 3_1:+59829332 Msa0365620:five_prime_UTR
TAGGAGAAACCTGTGTGTAC+GGG 0.487737 3_1:-59836272 None:intergenic
TCTCCAAGATTGGTTAGCTG+TGG 0.489439 3_1:-59840472 None:intergenic
GGTTGAAAGTTCTATGGAAA+TGG 0.489937 3_1:+59831216 Msa0365620:five_prime_UTR
CTCAACAGTTTGCTAGCCTC+TGG 0.490161 3_1:-59829494 None:intergenic
GTAGGAGAAACCTGTGTGTA+CGG 0.491626 3_1:-59836273 None:intergenic
TGAAGGTTCTAAAGAGAGTC+GGG 0.494547 3_1:+59831743 Msa0365620:five_prime_UTR
AGCATGGGAAATCTTCTCAA+TGG 0.497933 3_1:+59840504 Msa0365620:CDS
GATCTTCGTCTTGCCGGTGT+TGG 0.498167 3_1:-59827891 None:intergenic
TCATCGTCATCAGTAGAATC+AGG 0.499159 3_1:-59827917 None:intergenic
AAAATAATCTCCCTGAGGAT+TGG 0.503477 3_1:-59840534 None:intergenic
ATGGTCACGAACCAATCCTC+AGG 0.503857 3_1:+59840523 Msa0365620:CDS
CGTCTTGCCGGTGTTGGTGG+AGG 0.513140 3_1:-59827885 None:intergenic
CCAATATAAGCTTTCCGAGA+AGG 0.513716 3_1:-59829663 None:intergenic
TGCCGGCTTTGGATGTCTGA+TGG 0.517822 3_1:+59828577 Msa0365620:five_prime_UTR
TTTCATATAGTCCTCATCAA+AGG 0.518881 3_1:-59830409 None:intergenic
GATGCTGATCCACTGCTCTC+GGG 0.519692 3_1:-59838328 None:intergenic
TGCATGTCTTCTGTCATAAG+AGG 0.520468 3_1:-59836390 None:intergenic
TGTCGGAGCACGGAAATTTG+TGG 0.522930 3_1:+59838419 Msa0365620:CDS
TCATCTGCTTCCCAATCTCC+AGG 0.523726 3_1:-59838301 None:intergenic
TGTTCCGAAGCAGGAAGAGC+AGG 0.527290 3_1:-59838463 None:intergenic
TCGTGAACTGGAACAAATGC+TGG 0.532806 3_1:-59829639 None:intergenic
ATAAAACTTATGCATTTGGA+GGG 0.535174 3_1:+59829753 Msa0365620:five_prime_UTR
GATTAATCAAACAAGTAGAA+AGG 0.539887 3_1:-59834166 None:intergenic
CTTGTGGCAGCTGAAAATCC+TGG 0.542047 3_1:+59831970 Msa0365620:intron
GATCCGTTAGGTGCCATCCT+AGG 0.542441 3_1:-59834137 None:intergenic
AGTTTGTTCGAGAGGTTAGG+TGG 0.546050 3_1:+59834090 Msa0365620:five_prime_UTR
ACTTACAGAATGTATATATG+TGG 0.546156 3_1:+59840627 Msa0365620:CDS
GACATCAAGTGGGACACAAT+GGG 0.546476 3_1:+59830479 Msa0365620:five_prime_UTR
ATCAAACACGCACCGTTCCC+AGG 0.548121 3_1:-59828107 None:intergenic
AAGCAATTGATGTGGTCGTA+AGG 0.548145 3_1:-59839859 None:intergenic
CGAAGTCTTATTTCCCTCAT+CGG 0.551491 3_1:-59833809 None:intergenic
TTGACAAGAAACAAGCAGTA+AGG 0.552332 3_1:+59840409 Msa0365620:CDS
TCTCTATTTGGATCAAGAAG+AGG 0.552889 3_1:-59838490 None:intergenic
GAAAGGTCGATTGATCCGTT+AGG 0.553610 3_1:-59834149 None:intergenic
AGCTTTCAATATGCATTGAG+AGG 0.553845 3_1:+59834526 Msa0365620:intron
TTGAAGGTTCTAAAGAGAGT+CGG 0.554334 3_1:+59831742 Msa0365620:five_prime_UTR
TTATGGAGAACTGAAACAGA+TGG 0.560318 3_1:+59839938 Msa0365620:CDS
GATTTCAAATTATCGGAACC+AGG 0.560814 3_1:-59831988 None:intergenic
TTAACTAGGAGAGGTTCAGC+TGG 0.562481 3_1:+59836201 Msa0365620:five_prime_UTR
TTAGGTGCCATCCTAGGTAA+TGG 0.562654 3_1:-59834131 None:intergenic
CACCTCATGAAGCTGAGAAG+TGG 0.562932 3_1:+59831257 Msa0365620:five_prime_UTR
GGTTCTAAAGAGAGTCGGGT+TGG 0.563765 3_1:+59831747 Msa0365620:five_prime_UTR
GTATTCTGGCAATTTGTACA+AGG 0.564368 3_1:+59829116 Msa0365620:five_prime_UTR
GTCACAACCATTACCTAGGA+TGG 0.564747 3_1:+59834124 Msa0365620:five_prime_UTR
TCTTCAGACTTAACTAGGAG+AGG 0.564818 3_1:+59836192 Msa0365620:five_prime_UTR
ATGGTATGTGACCTCAGTCA+TGG 0.568093 3_1:-59834607 None:intergenic
ACCGTTCCCAGGAAGAAGCA+AGG 0.568748 3_1:-59828096 None:intergenic
GAAGATTATCAGGACTGTAT+CGG 0.570921 3_1:+59834564 Msa0365620:five_prime_UTR
ATGGATAGAGTTTGTTCGAG+AGG 0.572899 3_1:+59834082 Msa0365620:five_prime_UTR
GCGTCATCCTCCACCAACAC+CGG 0.572918 3_1:+59827878 Msa0365620:five_prime_UTR
CTTCTTGATCCAAATAGAGA+AGG 0.574853 3_1:+59838493 Msa0365620:CDS
GACCATCAGACATCCAAAGC+CGG 0.576876 3_1:-59828579 None:intergenic
AACTTTGTTCTAGGTAAAAG+GGG 0.577221 3_1:+59829080 Msa0365620:intron
TATATTGGAATTCAGAGCAT+GGG 0.581759 3_1:+59829678 Msa0365620:five_prime_UTR
ATGATTGTTCTTGGAGTGAG+TGG 0.584633 3_1:+59830505 Msa0365620:five_prime_UTR
ATGCAAGCTGTTGAAGCCAT+TGG 0.586740 3_1:+59836423 Msa0365620:five_prime_UTR
AGACATCAAGTGGGACACAA+TGG 0.587373 3_1:+59830478 Msa0365620:five_prime_UTR
TAAATTGCAGGAAGAAAGTG+TGG 0.587545 3_1:+59834734 Msa0365620:intron
GATTAATCAGAAACTTCAGA+TGG 0.588476 3_1:+59834181 Msa0365620:five_prime_UTR
ATCGCTCCTCAGAGTGCAAG+TGG 0.589618 3_1:+59829455 Msa0365620:five_prime_UTR
CCGTTCCCAGGAAGAAGCAA+GGG 0.590595 3_1:-59828095 None:intergenic
CGGTGAAGGTATAACCATTG+AGG 0.591681 3_1:-59832010 None:intergenic
AAAATTTCTCTTGAGAGCCG+TGG 0.592922 3_1:-59840207 None:intergenic
CGATCATATCTGAGATTCGA+TGG 0.594175 3_1:+59827856 Msa0365620:five_prime_UTR
AATAACTAGTTACCTTGTAG+AGG 0.597222 3_1:-59840008 None:intergenic
ATCAACAAGAAGATGCAACT+GGG 0.598756 3_1:-59831778 None:intergenic
TGCCTTGAAAACTTACAGCA+TGG 0.601892 3_1:+59829158 Msa0365620:five_prime_UTR
GCTTACAAATGAATCACCAA+TGG 0.602069 3_1:-59836439 None:intergenic
TTGCAGGAAGAAAGTGTGGT+TGG 0.609382 3_1:+59834738 Msa0365620:intron
CAGAACACTCCCCTTTGATG+AGG 0.609705 3_1:+59830398 Msa0365620:five_prime_UTR
GATGATGATCCCGAGAGCAG+TGG 0.609855 3_1:+59838319 Msa0365620:CDS
ATTTGTTCAAGCAATTGATG+TGG 0.610015 3_1:-59839867 None:intergenic
TCGCTCCACGATAGAGTGAG+TGG 0.610435 3_1:+59840558 Msa0365620:CDS
CGTCATCAGTAGAATCAGGT+AGG 0.610831 3_1:-59827913 None:intergenic
TCTAAGAGAATGTCGGAGCA+CGG 0.611994 3_1:+59838409 Msa0365620:CDS
TCAACAACTTTATCCTACCA+TGG 0.615005 3_1:+59839971 Msa0365620:CDS
AGGTTTGAAGCAGATCGCAT+TGG 0.616256 3_1:+59829717 Msa0365620:five_prime_UTR
AGGCCTCAAAGCAGATGCCA+TGG 0.616368 3_1:-59839988 None:intergenic
TCTGCTTTGAGGCCTCTACA+AGG 0.619352 3_1:+59839996 Msa0365620:CDS
AACCACTTCTCAGCTTCATG+AGG 0.619960 3_1:-59831259 None:intergenic
TAAAACTTATGCATTTGGAG+GGG 0.620059 3_1:+59829754 Msa0365620:five_prime_UTR
CTTACTGGTGAGACATCAAG+TGG 0.628857 3_1:+59830468 Msa0365620:five_prime_UTR
AGATATGTCAGCATTTAAAG+CGG 0.629182 3_1:+59838234 Msa0365620:CDS
ACTGAAGGCATACTCCACAT+TGG 0.630062 3_1:+59830326 Msa0365620:intron
AGCACACGATCTCTAACAGT+CGG 0.633362 3_1:-59832030 None:intergenic
CGATCTCTAACAGTCGGTGA+AGG 0.634551 3_1:-59832024 None:intergenic
TTATATTGGAATTCAGAGCA+TGG 0.634913 3_1:+59829677 Msa0365620:five_prime_UTR
TCAATTGCTTGAACAAATGG+TGG 0.635113 3_1:+59839872 Msa0365620:CDS
ATGTCTTCTGTCATAAGAGG+TGG 0.637142 3_1:-59836387 None:intergenic
GGGAGCAAGCTTGAAAGAAG+AGG 0.639622 3_1:+59840263 Msa0365620:CDS
CAAGATTGGTTAGCTGTGGG+AGG 0.640091 3_1:-59840468 None:intergenic
TTACCTAGGATGGCACCTAA+CGG 0.641363 3_1:+59834134 Msa0365620:five_prime_UTR
AAGAGTCACAACCATTACCT+AGG 0.642195 3_1:+59834120 Msa0365620:five_prime_UTR
CTCTTAGAAAGCTTCCCACG+TGG 0.649641 3_1:-59838394 None:intergenic
ACACACCGAAGTTGAAGACA+TGG 0.655155 3_1:+59827940 Msa0365620:five_prime_UTR
TGGTCACGAACCAATCCTCA+GGG 0.656438 3_1:+59840524 Msa0365620:CDS
GAAGCTTTCTAAGAGAATGT+CGG 0.656881 3_1:+59838402 Msa0365620:CDS
TTAGAAAGCTTCCCACGTGG+AGG 0.657047 3_1:-59838391 None:intergenic
CTCAAAGCAGATGCCATGGT+AGG 0.657425 3_1:-59839984 None:intergenic
AAGATAGTTGGCCTCCACGT+GGG 0.657707 3_1:+59838380 Msa0365620:CDS
AGGAGAAACCTGTGTGTACG+GGG 0.659244 3_1:-59836271 None:intergenic
TGTAGTTCTTGATGCACCAG+AGG 0.663468 3_1:+59829478 Msa0365620:five_prime_UTR
GATTACCACTCACTCTATCG+TGG 0.664886 3_1:-59840563 None:intergenic
TGTGCAAAGAGTGACTCAAG+AGG 0.665633 3_1:-59833850 None:intergenic
TCTTGGCATCCAGATGACGC+AGG 0.676543 3_1:+59829273 Msa0365620:intron
TATGCATGCCCCGTACACAC+AGG 0.679486 3_1:+59836263 Msa0365620:five_prime_UTR
AAAGATAGTTGGCCTCCACG+TGG 0.683279 3_1:+59838379 Msa0365620:CDS
TCATATAGATTCCATGACTG+AGG 0.684894 3_1:+59834596 Msa0365620:five_prime_UTR
ACTACACCACTTGCACTCTG+AGG 0.685653 3_1:-59829461 None:intergenic
AACAAGAAGATGCAACTGGG+AGG 0.691164 3_1:-59831775 None:intergenic
TCATATAGTCCTCATCAAAG+GGG 0.695091 3_1:-59830407 None:intergenic
ATGAACAGATAGATCCAATG+TGG 0.712050 3_1:-59830340 None:intergenic
TTTGGCAACTGCAATATACG+TGG 0.718773 3_1:+59833895 Msa0365620:five_prime_UTR
AATCACTATGCAGCTCGTAG+CGG 0.731948 3_1:+59840582 Msa0365620:CDS
CAACCGAAAGTGCAACACGT+AGG 0.757533 3_1:-59840662 None:intergenic
TTACTGGTGAGACATCAAGT+GGG 0.765914 3_1:+59830469 Msa0365620:five_prime_UTR
GCAAGCTTATACGAGCACCA+CGG 0.771138 3_1:+59840190 Msa0365620:CDS
GGTGGCTACTGCCTTCAGAG+CGG 0.783574 3_1:+59839890 Msa0365620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTGATTGTTTAAATT+CGG - chr3_1:59828971-59828990 None:intergenic 10.0%
!!! TATATTTTTTAAATCTATCT+TGG + chr3_1:59829256-59829275 Msa0365620:intron 10.0%
!! AATGAATTATTATATATTAC+TGG + chr3_1:59830022-59830041 Msa0365620:intron 10.0%
!! ATGAATTATTATATATTACT+GGG + chr3_1:59830023-59830042 Msa0365620:intron 10.0%
!! ATAATATAAAGAATTCAAAT+TGG - chr3_1:59831706-59831725 None:intergenic 10.0%
!!! AAGTGAAATATAATTTATTT+TGG + chr3_1:59832211-59832230 Msa0365620:intron 10.0%
!!! AAAAAATATGTTTTACTTTT+TGG - chr3_1:59832246-59832265 None:intergenic 10.0%
!!! AAAAGTAAAACATATTTTTT+TGG + chr3_1:59832246-59832265 Msa0365620:intron 10.0%
!! TCAATAAAATATTATACTAA+TGG - chr3_1:59833250-59833269 None:intergenic 10.0%
!!! ACATTTTCTAAAATTTATAT+TGG + chr3_1:59833398-59833417 Msa0365620:intron 10.0%
!!! CATTTTCTAAAATTTATATT+GGG + chr3_1:59833399-59833418 Msa0365620:intron 10.0%
!!! TAACTATTTTACAATAAATT+TGG - chr3_1:59835631-59835650 None:intergenic 10.0%
!! TAATTAAAATGATATATTTC+AGG + chr3_1:59835870-59835889 Msa0365620:intron 10.0%
!!! CATATATCATATTTTAAATT+AGG + chr3_1:59837625-59837644 Msa0365620:intron 10.0%
!!! CTATTAAAAATGAATTTTTT+GGG - chr3_1:59839159-59839178 None:intergenic 10.0%
!!! ATGTATTTTTTTCAAAATAA+TGG - chr3_1:59839405-59839424 None:intergenic 10.0%
!!! TAGTTAGTTCATATTTTTAT+AGG + chr3_1:59828217-59828236 Msa0365620:intron 15.0%
!!! TTAAATTACTTTAGTTTAGA+TGG + chr3_1:59828462-59828481 Msa0365620:intron 15.0%
!! ATAATAAAAAATTACCAGAA+GGG - chr3_1:59829203-59829222 None:intergenic 15.0%
!!! AATTTTTTATTATGGTTAGT+AGG + chr3_1:59829210-59829229 Msa0365620:intron 15.0%
!! TGAATTATTATATATTACTG+GGG + chr3_1:59830024-59830043 Msa0365620:intron 15.0%
!! AATCAATATTTAGAAAATAG+AGG + chr3_1:59830933-59830952 Msa0365620:intron 15.0%
!!! TTAGTATAACTATTCAATTT+TGG + chr3_1:59831917-59831936 Msa0365620:intron 15.0%
!!! ATATAATTTATTTTGGTTTG+AGG + chr3_1:59832218-59832237 Msa0365620:intron 15.0%
!!! TAATTTATTTTTTTCATGCA+CGG + chr3_1:59834204-59834223 Msa0365620:intron 15.0%
!! TATAGTTTCTCATAAAATAT+GGG + chr3_1:59834974-59834993 Msa0365620:intron 15.0%
!! ATAAAAATGAACAAAAGAAT+GGG - chr3_1:59835780-59835799 None:intergenic 15.0%
!! TTGAATATACTTAATAAATG+CGG + chr3_1:59837191-59837210 Msa0365620:intron 15.0%
!! AAATATTGAAGTGAAATAAA+GGG - chr3_1:59837325-59837344 None:intergenic 15.0%
!! TAAATATTGAAGTGAAATAA+AGG - chr3_1:59837326-59837345 None:intergenic 15.0%
!! TTTGGTTACATAAAAAAAAA+AGG - chr3_1:59837473-59837492 None:intergenic 15.0%
!!! TAATGTATATACTCTTTTAT+TGG + chr3_1:59837807-59837826 Msa0365620:intron 15.0%
!!! TTATGTATGTAAATTTTTGT+AGG + chr3_1:59837911-59837930 Msa0365620:intron 15.0%
!!! TGATAATGAAACTTATTTTA+AGG + chr3_1:59837995-59838014 Msa0365620:intron 15.0%
!!! GATAATGAAACTTATTTTAA+GGG + chr3_1:59837996-59838015 Msa0365620:intron 15.0%
!!! GAGAAACTTAAATTATTTTA+AGG - chr3_1:59838815-59838834 None:intergenic 15.0%
!! AAGTTGTAAAAAAAAAATAG+TGG + chr3_1:59838888-59838907 Msa0365620:intron 15.0%
!!! CCTATTAAAAATGAATTTTT+TGG - chr3_1:59839160-59839179 None:intergenic 15.0%
!!! CCAAAAAATTCATTTTTAAT+AGG + chr3_1:59839157-59839176 Msa0365620:intron 15.0%
!!! TTCATTTTTAATAGGTATAT+AGG + chr3_1:59839165-59839184 Msa0365620:intron 15.0%
!! TATATAAAATACAGTTGAAA+AGG - chr3_1:59839320-59839339 None:intergenic 15.0%
!!! ATTAATTTGATGTTGTTTAT+TGG + chr3_1:59840694-59840713 Msa0365620:exon 15.0%
!!! TCATGGTTTTAATAATTTTA+AGG + chr3_1:59840725-59840744 Msa0365620:three_prime_UTR 15.0%
!!! AAATGATGATGAAACTTTTT+TGG - chr3_1:59827781-59827800 None:intergenic 20.0%
!!! TGTTCTTTAGTTAGTTTATT+CGG + chr3_1:59828307-59828326 Msa0365620:intron 20.0%
!! TTGATTAAATAAGTTCAGTT+TGG + chr3_1:59828341-59828360 Msa0365620:intron 20.0%
!! CAGAATACAAAAATATGAAT+CGG - chr3_1:59828430-59828449 None:intergenic 20.0%
!!! GTTGTTAATTGTTTTTTTGT+AGG + chr3_1:59828530-59828549 Msa0365620:intron 20.0%
!! AGTACAAAATGTTATCAAAT+AGG + chr3_1:59828913-59828932 Msa0365620:intron 20.0%
!!! AATTTTATGCCATTTCTTTT+TGG + chr3_1:59829038-59829057 Msa0365620:intron 20.0%
!! CATAATAAAAAATTACCAGA+AGG - chr3_1:59829204-59829223 None:intergenic 20.0%
!!! CTTCTGGTAATTTTTTATTA+TGG + chr3_1:59829202-59829221 Msa0365620:intron 20.0%
!!! AAATTTCATTGATTTCACTA+AGG + chr3_1:59829396-59829415 Msa0365620:intron 20.0%
!!! TTACTATTTTCTCATAACTT+TGG + chr3_1:59829601-59829620 Msa0365620:intron 20.0%
!! TTGTAAAAGAAAGAAAAGTA+TGG - chr3_1:59829908-59829927 None:intergenic 20.0%
!! ATCAAATGGAAATTAATTAC+AGG - chr3_1:59830306-59830325 None:intergenic 20.0%
!! AAAGGTAATTGTTATGATAA+AGG + chr3_1:59830549-59830568 Msa0365620:intron 20.0%
!!! TTTTTTTCTGAAACAAAACT+GGG - chr3_1:59830726-59830745 None:intergenic 20.0%
!! CAACTTATCCATAAATTAAA+TGG - chr3_1:59831155-59831174 None:intergenic 20.0%
!! TTAAAACGTGATATTATACA+AGG - chr3_1:59831604-59831623 None:intergenic 20.0%
!!! AAAAAGCATCAATAGTTTAA+TGG + chr3_1:59831623-59831642 Msa0365620:intron 20.0%
!!! TTTATAGAAGATTTTGTTTC+AGG + chr3_1:59831828-59831847 Msa0365620:five_prime_UTR 20.0%
!! ATACTAACTAAGAAACATAA+AGG - chr3_1:59831904-59831923 None:intergenic 20.0%
!! CAGATTTATTGAACATATAT+AGG - chr3_1:59832149-59832168 None:intergenic 20.0%
!! TAAAAAATACCTATGTTCTT+AGG - chr3_1:59832411-59832430 None:intergenic 20.0%
!! TGAAAAAATGTTTATGAATG+TGG - chr3_1:59832503-59832522 None:intergenic 20.0%
!! TTTCCAATACAAATAAAAGA+GGG + chr3_1:59832900-59832919 Msa0365620:intron 20.0%
!! TACAGATATTAGTGAAATTT+AGG + chr3_1:59832942-59832961 Msa0365620:intron 20.0%
!!! CAGTTTATTTTTGTTTACAT+GGG - chr3_1:59833568-59833587 None:intergenic 20.0%
!! CATGTAAACAAAAATAAACT+GGG + chr3_1:59833567-59833586 Msa0365620:intron 20.0%
!!! TTTTAATGTGATAAAGGAAA+GGG - chr3_1:59833616-59833635 None:intergenic 20.0%
!!! CTTATGTTTTAATGTGATAA+AGG - chr3_1:59833622-59833641 None:intergenic 20.0%
!! CTTTATCACATTAAAACATA+AGG + chr3_1:59833620-59833639 Msa0365620:intron 20.0%
!!! AATTTTGTTTACATTCTCTT+TGG + chr3_1:59833872-59833891 Msa0365620:five_prime_UTR 20.0%
!! CTAAAATCAAAAGGAAAAAA+TGG - chr3_1:59834629-59834648 None:intergenic 20.0%
!!! TTTGTGTTATTATTGTAAAC+TGG + chr3_1:59834704-59834723 Msa0365620:intron 20.0%
!! CTATAGTTTCTCATAAAATA+TGG + chr3_1:59834973-59834992 Msa0365620:intron 20.0%
!! ACTTTCAATTCTCTATAATA+TGG + chr3_1:59835295-59835314 Msa0365620:intron 20.0%
!! AATAAATTTGGTTAAATTCG+AGG - chr3_1:59835619-59835638 None:intergenic 20.0%
!! TAAAAATGAACAAAAGAATG+GGG - chr3_1:59835779-59835798 None:intergenic 20.0%
!! GATAAAAATGAACAAAAGAA+TGG - chr3_1:59835781-59835800 None:intergenic 20.0%
!!! AAGATTTTTTGTCTTTATAC+AGG - chr3_1:59836176-59836195 None:intergenic 20.0%
!! TTTAATATCAATTAACTGCT+TGG - chr3_1:59836600-59836619 None:intergenic 20.0%
!! ATTACAAAATGTTAACTCAA+TGG - chr3_1:59836824-59836843 None:intergenic 20.0%
!! ATTACAAAATGTTAACTCAA+TGG - chr3_1:59836824-59836843 None:intergenic 20.0%
!!! TCATAATGTTGTTTCATAAA+AGG + chr3_1:59836967-59836986 Msa0365620:intron 20.0%
!!! ATGTTTATAGAAAGTATCAT+AGG + chr3_1:59837148-59837167 Msa0365620:intron 20.0%
!! ACATAAACATAACACTATAT+AGG - chr3_1:59837296-59837315 None:intergenic 20.0%
!! ATATAGTGTTATGTTTATGT+TGG + chr3_1:59837296-59837315 Msa0365620:intron 20.0%
!!! GAAGGCTATTTTTTTTTTTT+TGG - chr3_1:59837491-59837510 None:intergenic 20.0%
!! AGAAAAATTCTGTACAAAAA+AGG - chr3_1:59837657-59837676 None:intergenic 20.0%
!! TTTCTGATATTTAATGAGTA+TGG - chr3_1:59837871-59837890 None:intergenic 20.0%
!!! TTATTTTAAGGGAATGTTTT+GGG + chr3_1:59838007-59838026 Msa0365620:intron 20.0%
!! AGTTTATTATGTATTCTATG+TGG - chr3_1:59838097-59838116 None:intergenic 20.0%
!!! TATAAACTATGAAGCATTAA+GGG - chr3_1:59838149-59838168 None:intergenic 20.0%
!!! ATTATAGTATTGAACAATGT+TGG - chr3_1:59838179-59838198 None:intergenic 20.0%
!! ATATAAATTACGAACAATGT+GGG + chr3_1:59838591-59838610 Msa0365620:intron 20.0%
!! ATGAATTTAACTGCTATAAT+TGG - chr3_1:59838630-59838649 None:intergenic 20.0%
!! AATTATAGCAGTTAAATTCA+TGG + chr3_1:59838629-59838648 Msa0365620:intron 20.0%
!! TTCATAATAAGACTTATTCA+CGG - chr3_1:59838703-59838722 None:intergenic 20.0%
!! TGTAAAAAAAAAATAGTGGT+TGG + chr3_1:59838892-59838911 Msa0365620:intron 20.0%
!! ATTCTATTGAAACAATACAT+AGG - chr3_1:59838928-59838947 None:intergenic 20.0%
!!! ATTTATATTCTCAATTTTCC+AGG + chr3_1:59839818-59839837 Msa0365620:intron 20.0%
!!! AACTTTTATATTCCAACAAT+GGG + chr3_1:59840243-59840262 Msa0365620:CDS 20.0%
! AATCAGAATCATAATTCGAT+TGG - chr3_1:59827997-59828016 None:intergenic 25.0%
! TTAAATAAGTTCAGTTTGGA+TGG + chr3_1:59828345-59828364 Msa0365620:intron 25.0%
!!! TAGGTTTATTTCTGAAATAG+AGG + chr3_1:59828549-59828568 Msa0365620:intron 25.0%
!!! ATGCTTACCATTAGATTTTT+TGG - chr3_1:59828604-59828623 None:intergenic 25.0%
! AATTTCGTATATTGAAATGC+CGG + chr3_1:59828636-59828655 Msa0365620:intron 25.0%
! CATATTTGTAAATTGTGATG+CGG + chr3_1:59828689-59828708 Msa0365620:intron 25.0%
! AATTTCGGTTTCTTCAAATT+CGG - chr3_1:59828874-59828893 None:intergenic 25.0%
!! TAACTTTGTTCTAGGTAAAA+GGG + chr3_1:59829079-59829098 Msa0365620:intron 25.0%
! TCCAATAAAACTTATGCATT+TGG + chr3_1:59829749-59829768 Msa0365620:five_prime_UTR 25.0%
!!! TCCAAATGCATAAGTTTTAT+TGG - chr3_1:59829753-59829772 None:intergenic 25.0%
! AATAAAACTTATGCATTTGG+AGG + chr3_1:59829752-59829771 Msa0365620:five_prime_UTR 25.0%
! ATAAAACTTATGCATTTGGA+GGG + chr3_1:59829753-59829772 Msa0365620:five_prime_UTR 25.0%
! TAAATTAAACAACAAGAGAC+AGG - chr3_1:59829814-59829833 None:intergenic 25.0%
!!! TTCATTTAATTTTCTGACGT+TGG + chr3_1:59829837-59829856 Msa0365620:intron 25.0%
!!! GCAACAGTTTTCTATTTTTT+TGG + chr3_1:59830060-59830079 Msa0365620:intron 25.0%
!! ACTTTTCCTTTTCTATATTC+TGG + chr3_1:59830137-59830156 Msa0365620:intron 25.0%
! AGTAAACCAGAATATAGAAA+AGG - chr3_1:59830146-59830165 None:intergenic 25.0%
! AGAATTCAAGAAACACATTT+GGG - chr3_1:59830172-59830191 None:intergenic 25.0%
! AAGAATTCAAGAAACACATT+TGG - chr3_1:59830173-59830192 None:intergenic 25.0%
!!! ATAAATTATTAGGTTGAGGT+AGG - chr3_1:59830216-59830235 None:intergenic 25.0%
!! TAGCATAAATTATTAGGTTG+AGG - chr3_1:59830220-59830239 None:intergenic 25.0%
! TAATTTCCATTTGATACTGA+AGG + chr3_1:59830311-59830330 Msa0365620:intron 25.0%
! AAATCTGAAGAAAATCTTAC+TGG + chr3_1:59830453-59830472 Msa0365620:five_prime_UTR 25.0%
! TCATAACAATTACCTTTAAC+AGG - chr3_1:59830546-59830565 None:intergenic 25.0%
! TCACAAAATACACATTCTAT+AGG - chr3_1:59830632-59830651 None:intergenic 25.0%
!!! GTTTTTTTCTGAAACAAAAC+TGG - chr3_1:59830727-59830746 None:intergenic 25.0%
! GCAAGGATGAAAAATAAAAT+AGG - chr3_1:59830749-59830768 None:intergenic 25.0%
!! AAAGAGACAAACAAAAGTAT+AGG - chr3_1:59831015-59831034 None:intergenic 25.0%
! TCCATAAATTAAATGGAACT+GGG - chr3_1:59831148-59831167 None:intergenic 25.0%
! ATCCATAAATTAAATGGAAC+TGG - chr3_1:59831149-59831168 None:intergenic 25.0%
! CTGATGAAAATGAAATTTCT+GGG - chr3_1:59831472-59831491 None:intergenic 25.0%
! ACTGATGAAAATGAAATTTC+TGG - chr3_1:59831473-59831492 None:intergenic 25.0%
! ATAACACTTGTGAATTGTAA+TGG + chr3_1:59831510-59831529 Msa0365620:intron 25.0%
!!! TTTCAGGTTCAAATTTGTTT+TGG + chr3_1:59831844-59831863 Msa0365620:intron 25.0%
! CATTGAGGATTTCAAATTAT+CGG - chr3_1:59831998-59832017 None:intergenic 25.0%
! TTATATTTCACTTCACTCTT+TGG - chr3_1:59832204-59832223 None:intergenic 25.0%
!!! AAACATATTTTTTTGGACAG+TGG + chr3_1:59832253-59832272 Msa0365620:intron 25.0%
! TATGTATTTCCTAAGAACAT+AGG + chr3_1:59832399-59832418 Msa0365620:intron 25.0%
! GAGATTACAAATATATTGCT+GGG - chr3_1:59832449-59832468 None:intergenic 25.0%
! AGAGATTACAAATATATTGC+TGG - chr3_1:59832450-59832469 None:intergenic 25.0%
! ATTAACACCATATTAGAACT+TGG + chr3_1:59832651-59832670 Msa0365620:intron 25.0%
! AAACGAAAATACCTAAACTT+GGG - chr3_1:59832840-59832859 None:intergenic 25.0%
! AAAACGAAAATACCTAAACT+TGG - chr3_1:59832841-59832860 None:intergenic 25.0%
! CTTTCCAATACAAATAAAAG+AGG + chr3_1:59832899-59832918 Msa0365620:intron 25.0%
! TTCCAATACAAATAAAAGAG+GGG + chr3_1:59832901-59832920 Msa0365620:intron 25.0%
! AGATATTAGTGAAATTTAGG+TGG + chr3_1:59832945-59832964 Msa0365620:intron 25.0%
! GATATTAGTGAAATTTAGGT+GGG + chr3_1:59832946-59832965 Msa0365620:intron 25.0%
! ATATTAGTGAAATTTAGGTG+GGG + chr3_1:59832947-59832966 Msa0365620:intron 25.0%
!!! TGGTTTTATTTTTGATGGTT+AGG + chr3_1:59832973-59832992 Msa0365620:intron 25.0%
!! TGGTATTCTATTTAAGTTAG+AGG - chr3_1:59833431-59833450 None:intergenic 25.0%
!!! TTGTTTTTTCTGGAATTAAG+TGG - chr3_1:59833499-59833518 None:intergenic 25.0%
!! ACTATTTTCTTGTTCTTGAA+AGG + chr3_1:59833527-59833546 Msa0365620:intron 25.0%
!!! CCAGTTTATTTTTGTTTACA+TGG - chr3_1:59833569-59833588 None:intergenic 25.0%
! CCATGTAAACAAAAATAAAC+TGG + chr3_1:59833566-59833585 Msa0365620:intron 25.0%
!!! GTTTTAATGTGATAAAGGAA+AGG - chr3_1:59833617-59833636 None:intergenic 25.0%
! TTCAAAATTATTCACTAAGC+AGG - chr3_1:59833657-59833676 None:intergenic 25.0%
!! TTTTGAATTTCATGTTTCCT+TGG + chr3_1:59833670-59833689 Msa0365620:intron 25.0%
! GATTAATCAAACAAGTAGAA+AGG - chr3_1:59834169-59834188 None:intergenic 25.0%
!! TTTTCTTGTAGCTAAAAAGT+GGG - chr3_1:59834331-59834350 None:intergenic 25.0%
!!! TCCTTTTGATTTTAGTGATT+AGG + chr3_1:59834634-59834653 Msa0365620:intron 25.0%
! ACCTAATCACTAAAATCAAA+AGG - chr3_1:59834638-59834657 None:intergenic 25.0%
!!! ATTTTAGTGATTAGGTTGAT+TGG + chr3_1:59834642-59834661 Msa0365620:intron 25.0%
! AATTAGTGGTTATAAGTGAT+GGG - chr3_1:59835048-59835067 None:intergenic 25.0%
! AAATTAGTGGTTATAAGTGA+TGG - chr3_1:59835049-59835068 None:intergenic 25.0%
! ATCACTTATAACCACTAATT+TGG + chr3_1:59835048-59835067 Msa0365620:intron 25.0%
! TAGTAATATGACCAAATTAG+TGG - chr3_1:59835062-59835081 None:intergenic 25.0%
! TTGATACCATATCATCTAAT+AGG + chr3_1:59835209-59835228 Msa0365620:intron 25.0%
! ACCAAGAAACAAAAATGTAA+TGG + chr3_1:59835337-59835356 Msa0365620:intron 25.0%
!!! TCCATTACATTTTTGTTTCT+TGG - chr3_1:59835341-59835360 None:intergenic 25.0%
! AATATTGTGAAGGAAATTTG+GGG - chr3_1:59835451-59835470 None:intergenic 25.0%
! GAATATTGTGAAGGAAATTT+GGG - chr3_1:59835452-59835471 None:intergenic 25.0%
! TGAATATTGTGAAGGAAATT+TGG - chr3_1:59835453-59835472 None:intergenic 25.0%
!!! CCATATTTTAATATGGTGAT+AGG - chr3_1:59835537-59835556 None:intergenic 25.0%
! CCTATCACCATATTAAAATA+TGG + chr3_1:59835534-59835553 Msa0365620:intron 25.0%
! ACCATATTAAAATATGGACT+GGG + chr3_1:59835540-59835559 Msa0365620:intron 25.0%
!! TGAATATATTGTTGCTTCTT+TGG + chr3_1:59835753-59835772 Msa0365620:intron 25.0%
! AATTTGGCAAAGGAAATAAA+AGG - chr3_1:59835929-59835948 None:intergenic 25.0%
! AAAAATCTTCAGACTTAACT+AGG + chr3_1:59836187-59836206 Msa0365620:five_prime_UTR 25.0%
!!! TCACAATGTTGTTTCATAAA+AGG + chr3_1:59836862-59836881 Msa0365620:intron 25.0%
!!! TTTTTTACCTAGCTTGAAAA+AGG + chr3_1:59836888-59836907 Msa0365620:intron 25.0%
!!! TAATGTTGTTTCATAAAAGG+TGG + chr3_1:59836970-59836989 Msa0365620:intron 25.0%
! ATAAATGCGGTTAAATTCTT+TGG + chr3_1:59837204-59837223 Msa0365620:intron 25.0%
! TAGGTACATAAGAAATTCTT+CGG - chr3_1:59837277-59837296 None:intergenic 25.0%
! AAAATGTTCAAGGATAAAGA+AGG - chr3_1:59837509-59837528 None:intergenic 25.0%
! ATGATCAACCAAATTCAAAT+GGG - chr3_1:59837543-59837562 None:intergenic 25.0%
! AATGATCAACCAAATTCAAA+TGG - chr3_1:59837544-59837563 None:intergenic 25.0%
!! TTAAGTTTTTACCTGAAGTT+AGG - chr3_1:59837700-59837719 None:intergenic 25.0%
!!! TATATGAAATTTTAAGGGCA+TGG + chr3_1:59837969-59837988 Msa0365620:intron 25.0%
!!! CTTATTTTAAGGGAATGTTT+TGG + chr3_1:59838006-59838025 Msa0365620:intron 25.0%
! ATTATGTATTCTATGTGGAT+TGG - chr3_1:59838092-59838111 None:intergenic 25.0%
!! CTATAAACTATGAAGCATTA+AGG - chr3_1:59838150-59838169 None:intergenic 25.0%
! TATATGTGACAGACAAAAAA+TGG + chr3_1:59838198-59838217 Msa0365620:intron 25.0%
!!! CTACTTTTGAAGACTTTATT+CGG + chr3_1:59838269-59838288 Msa0365620:CDS 25.0%
! AAAATAAGTCGAAAGATAGT+TGG + chr3_1:59838368-59838387 Msa0365620:CDS 25.0%
! CACATTGTTCGTAATTTATA+TGG - chr3_1:59838592-59838611 None:intergenic 25.0%
! CATATAAATTACGAACAATG+TGG + chr3_1:59838590-59838609 Msa0365620:intron 25.0%
! TCAAGATTCAAATTGTGAAT+CGG + chr3_1:59838660-59838679 Msa0365620:intron 25.0%
! ATTTCAATAGAATGAGTCAT+GGG + chr3_1:59838963-59838982 Msa0365620:intron 25.0%
! AGCATTCATCATAATCAAAT+TGG + chr3_1:59839001-59839020 Msa0365620:intron 25.0%
! GCATTCATCATAATCAAATT+GGG + chr3_1:59839002-59839021 Msa0365620:intron 25.0%
!!! ATGAATTTTTTGGGATTTTG+AGG - chr3_1:59839150-59839169 None:intergenic 25.0%
! ACAGTTGAAAAGGTAAAAAA+AGG - chr3_1:59839310-59839329 None:intergenic 25.0%
!! AAGCATTTTGCAATTTCTTA+TGG - chr3_1:59839360-59839379 None:intergenic 25.0%
!!! AGCCAGAAATATTTTAATGA+GGG - chr3_1:59839446-59839465 None:intergenic 25.0%
! AAAGATATAAGAAGTAGCAT+CGG + chr3_1:59839568-59839587 Msa0365620:intron 25.0%
! AATCGTCTTATATAAACACA+TGG - chr3_1:59839619-59839638 None:intergenic 25.0%
! TTATATAAGACGATTTGTCT+TGG + chr3_1:59839624-59839643 Msa0365620:intron 25.0%
! GTGGTTAGAAATATTAAGAA+AGG + chr3_1:59839690-59839709 Msa0365620:intron 25.0%
!! CAACTTTTATATTCCAACAA+TGG + chr3_1:59840242-59840261 Msa0365620:CDS 25.0%
! ACTTACAGAATGTATATATG+TGG + chr3_1:59840627-59840646 Msa0365620:CDS 25.0%
!! TAGGTTTGTTTCTGAAATAG+AGG + chr3_1:59828236-59828255 Msa0365620:intron 30.0%
TGATGGTCCAAAAAATCTAA+TGG + chr3_1:59828594-59828613 Msa0365620:five_prime_UTR 30.0%
!!! TGCTTCACTGTTTTTAAGTA+TGG + chr3_1:59828730-59828749 Msa0365620:intron 30.0%
! AGAGTACTATGCAACAATTT+CGG - chr3_1:59828889-59828908 None:intergenic 30.0%
TTATCAAATAGGCGCTATAA+TGG + chr3_1:59828924-59828943 Msa0365620:intron 30.0%
ATGTTGTCAATTGCAAATTG+CGG - chr3_1:59828996-59829015 None:intergenic 30.0%
CAATTTGCAATTGACAACAT+TGG + chr3_1:59828996-59829015 Msa0365620:intron 30.0%
! CATTTCTTTTTGGACTTGAA+CGG + chr3_1:59829048-59829067 Msa0365620:intron 30.0%
TTTACCTAGAACAAAGTTAC+AGG - chr3_1:59829078-59829097 None:intergenic 30.0%
! GTAACTTTGTTCTAGGTAAA+AGG + chr3_1:59829078-59829097 Msa0365620:intron 30.0%
! AACTTTGTTCTAGGTAAAAG+GGG + chr3_1:59829080-59829099 Msa0365620:intron 30.0%
TAAAAAATTACCAGAAGGGT+TGG - chr3_1:59829199-59829218 None:intergenic 30.0%
TTATTATGGTTAGTAGGTTG+AGG + chr3_1:59829216-59829235 Msa0365620:intron 30.0%
AAATCCAAATTCCAATTTGC+AGG - chr3_1:59829303-59829322 None:intergenic 30.0%
!! TTTCGGTGTAAAGGAATTTT+TGG + chr3_1:59829341-59829360 Msa0365620:five_prime_UTR 30.0%
!!! GTGTAAAGGAATTTTTGGTA+TGG + chr3_1:59829346-59829365 Msa0365620:intron 30.0%
CTAATGTCATGTATGTCATT+AGG + chr3_1:59829430-59829449 Msa0365620:intron 30.0%
TTATATTGGAATTCAGAGCA+TGG + chr3_1:59829677-59829696 Msa0365620:five_prime_UTR 30.0%
TATATTGGAATTCAGAGCAT+GGG + chr3_1:59829678-59829697 Msa0365620:five_prime_UTR 30.0%
TAAAACTTATGCATTTGGAG+GGG + chr3_1:59829754-59829773 Msa0365620:five_prime_UTR 30.0%
CTTGAGATGAAATAAATACG+TGG + chr3_1:59829992-59830011 Msa0365620:intron 30.0%
CTTAAAGAATACAGAGATCT+CGG - chr3_1:59830095-59830114 None:intergenic 30.0%
!! TGGCTCTAGCATAAATTATT+AGG - chr3_1:59830226-59830245 None:intergenic 30.0%
TAATAATTTATGCTAGAGCC+AGG + chr3_1:59830225-59830244 Msa0365620:intron 30.0%
! ATGTTAGCTTCATTGCAATT+CGG - chr3_1:59830377-59830396 None:intergenic 30.0%
TTCATATAGTCCTCATCAAA+GGG - chr3_1:59830411-59830430 None:intergenic 30.0%
TTTCATATAGTCCTCATCAA+AGG - chr3_1:59830412-59830431 None:intergenic 30.0%
!! TGTTCTGAAGTTATTGAGAA+AGG + chr3_1:59830653-59830672 Msa0365620:intron 30.0%
!! GTTCTGAAGTTATTGAGAAA+GGG + chr3_1:59830654-59830673 Msa0365620:intron 30.0%
!! TTTGTCATACAAAGCATTGA+GGG - chr3_1:59830703-59830722 None:intergenic 30.0%
! CTATTGTTCTTTTTGTCCAT+GGG + chr3_1:59830852-59830871 Msa0365620:intron 30.0%
! TATTGTTCTTTTTGTCCATG+GGG + chr3_1:59830853-59830872 Msa0365620:intron 30.0%
!! TTAATGACTTGGGACATTTT+TGG + chr3_1:59831046-59831065 Msa0365620:intron 30.0%
! TCCCAGTTCCATTTAATTTA+TGG + chr3_1:59831144-59831163 Msa0365620:intron 30.0%
!! GTTTTGAACTGATCACAATA+TGG + chr3_1:59831182-59831201 Msa0365620:five_prime_UTR 30.0%
!!! TGTTTGGTTTTGATTCTACA+GGG - chr3_1:59831328-59831347 None:intergenic 30.0%
!!! ATGTTTGGTTTTGATTCTAC+AGG - chr3_1:59831329-59831348 None:intergenic 30.0%
TAATAATCAGAGTCAGTATG+TGG + chr3_1:59831412-59831431 Msa0365620:intron 30.0%
ACTTGTGAATTGTAATGGTT+AGG + chr3_1:59831515-59831534 Msa0365620:intron 30.0%
!! ACTTCAAAAGCATTTACTGA+GGG + chr3_1:59831577-59831596 Msa0365620:intron 30.0%
TGTTATGTATACAGACTTGA+AGG + chr3_1:59831726-59831745 Msa0365620:intron 30.0%
! CGATAATTTGAAATCCTCAA+TGG + chr3_1:59831996-59832015 Msa0365620:five_prime_UTR 30.0%
CTGAAAGAACTGTTTATTGA+AGG + chr3_1:59832051-59832070 Msa0365620:five_prime_UTR 30.0%
GAACTGTTTATTGAAGGTAA+TGG + chr3_1:59832057-59832076 Msa0365620:intron 30.0%
TTCCACTGTCCAAAAAAATA+AGG + chr3_1:59832309-59832328 Msa0365620:intron 30.0%
TCCACTGTCCAAAAAAATAA+GGG + chr3_1:59832310-59832329 Msa0365620:intron 30.0%
! GGAACTTTTTATTACTGCAT+AGG - chr3_1:59832352-59832371 None:intergenic 30.0%
TTCCCAGGAAAGAATTATTA+CGG - chr3_1:59832375-59832394 None:intergenic 30.0%
ACCATATTAGAACTTGGATT+GGG + chr3_1:59832657-59832676 Msa0365620:intron 30.0%
GTCTCACATTAAATGTGATA+TGG - chr3_1:59832753-59832772 None:intergenic 30.0%
ATTTGTATTGGAAAGAACAG+AGG - chr3_1:59832894-59832913 None:intergenic 30.0%
!! ATCCCCTCTTTTATTTGTAT+TGG - chr3_1:59832906-59832925 None:intergenic 30.0%
TACAAATAAAAGAGGGGATA+AGG + chr3_1:59832907-59832926 Msa0365620:intron 30.0%
ACAAATAAAAGAGGGGATAA+GGG + chr3_1:59832908-59832927 Msa0365620:intron 30.0%
TATTAGTGAAATTTAGGTGG+GGG + chr3_1:59832948-59832967 Msa0365620:intron 30.0%
TCTCAATGGAAAAACAATGT+TGG + chr3_1:59833019-59833038 Msa0365620:intron 30.0%
CTCAATGGAAAAACAATGTT+GGG + chr3_1:59833020-59833039 Msa0365620:intron 30.0%
CAAACACATGTATACATGTT+TGG - chr3_1:59833451-59833470 None:intergenic 30.0%
ATGTATACATGTGTTTGCAT+TGG + chr3_1:59833454-59833473 Msa0365620:intron 30.0%
TCACATTAAAACATAAGGTC+TGG + chr3_1:59833625-59833644 Msa0365620:intron 30.0%
TGTTTACATTCTCTTTGGTT+TGG + chr3_1:59833877-59833896 Msa0365620:five_prime_UTR 30.0%
TAAGAAAATCAATTCCACGT+AGG - chr3_1:59833988-59834007 None:intergenic 30.0%
GATTAATCAGAAACTTCAGA+TGG + chr3_1:59834181-59834200 Msa0365620:five_prime_UTR 30.0%
! GTTTTCTTGTAGCTAAAAAG+TGG - chr3_1:59834332-59834351 None:intergenic 30.0%
!! GTCTCACTTTTCTTTCATTT+TGG + chr3_1:59834359-59834378 Msa0365620:intron 30.0%
GCCTAGAATACATAAAGATA+AGG + chr3_1:59834469-59834488 Msa0365620:intron 30.0%
GCCTTATCTTTATGTATTCT+AGG - chr3_1:59834473-59834492 None:intergenic 30.0%
TACATAAAGATAAGGCTAAG+TGG + chr3_1:59834477-59834496 Msa0365620:intron 30.0%
TCAGATGAATGAAGATTATC+AGG + chr3_1:59834554-59834573 Msa0365620:five_prime_UTR 30.0%
ATAAATTATAACAACCGAGC+AGG - chr3_1:59834841-59834860 None:intergenic 30.0%
! AGTGATTGGTAACATGATAA+TGG - chr3_1:59834926-59834945 None:intergenic 30.0%
TTTGATTCAACAACGAAGAT+TGG - chr3_1:59834950-59834969 None:intergenic 30.0%
CACATCCTATATATGTTGTT+GGG - chr3_1:59835187-59835206 None:intergenic 30.0%
! TGTATTTTGTTCATCCTTTC+TGG - chr3_1:59835237-59835256 None:intergenic 30.0%
ATTTCTATTATCACACCGTA+AGG - chr3_1:59835372-59835391 None:intergenic 30.0%
TCCATCTTATTCCCTTTAAT+GGG + chr3_1:59835511-59835530 Msa0365620:intron 30.0%
CACCATATTAAAATATGGAC+TGG + chr3_1:59835539-59835558 Msa0365620:intron 30.0%
TTAAATTCGAGGTTAGTAGT+GGG - chr3_1:59835608-59835627 None:intergenic 30.0%
ATTTAGAGAGAGCAGAATTT+AGG + chr3_1:59835803-59835822 Msa0365620:intron 30.0%
GATCAAAAGCTTACTGTTTA+AGG - chr3_1:59835836-59835855 None:intergenic 30.0%
! AACAGTAAGCTTTTGATCTT+TGG + chr3_1:59835838-59835857 Msa0365620:intron 30.0%
! AAAGGAAATAAAAGGCATAC+TGG - chr3_1:59835921-59835940 None:intergenic 30.0%
! GATTTTCGAAAATTTGGCAA+AGG - chr3_1:59835939-59835958 None:intergenic 30.0%
! CACAGTGATTTTCGAAAATT+TGG - chr3_1:59835945-59835964 None:intergenic 30.0%
TCTGCTGTTAAGAATAATCA+TGG + chr3_1:59836003-59836022 Msa0365620:intron 30.0%
CCAAAATATTTCCAAGAACA+TGG - chr3_1:59836061-59836080 None:intergenic 30.0%
! CCATGTTCTTGGAAATATTT+TGG + chr3_1:59836058-59836077 Msa0365620:intron 30.0%
CAGTTATGTCTACTATAAAG+GGG - chr3_1:59836091-59836110 None:intergenic 30.0%
GCAGTTATGTCTACTATAAA+GGG - chr3_1:59836092-59836111 None:intergenic 30.0%
AGCAGTTATGTCTACTATAA+AGG - chr3_1:59836093-59836112 None:intergenic 30.0%
AGCATTATATTCTGCAACAT+TGG - chr3_1:59836339-59836358 None:intergenic 30.0%
!!! TATCTTGTTTTCTATGCTAC+AGG + chr3_1:59836362-59836381 Msa0365620:intron 30.0%
CTATATACCAAGAAATTGAG+TGG - chr3_1:59836763-59836782 None:intergenic 30.0%
!! CAATGTTGTTTCATAAAAGG+TGG + chr3_1:59836865-59836884 Msa0365620:intron 30.0%
! GGTTTTACTTCTCTTGAAAA+AGG + chr3_1:59836991-59837010 Msa0365620:intron 30.0%
AATGAAAACTTCATACATGC+AGG - chr3_1:59837042-59837061 None:intergenic 30.0%
ATTGTAGTTGGTTACAAAGA+GGG - chr3_1:59837068-59837087 None:intergenic 30.0%
AATTGTAGTTGGTTACAAAG+AGG - chr3_1:59837069-59837088 None:intergenic 30.0%
TTGGATAGTTTAAACCTCTT+AGG + chr3_1:59837223-59837242 Msa0365620:intron 30.0%
TTGAGGTTAATGAAAATGCA+AGG + chr3_1:59837377-59837396 Msa0365620:intron 30.0%
AAGAAGCTTCAAAATGTTCA+AGG - chr3_1:59837519-59837538 None:intergenic 30.0%
!!! AACATGTCGATTTTGATTTC+TGG + chr3_1:59837752-59837771 Msa0365620:intron 30.0%
GTAGCATTTCAATTAGTTAC+TGG - chr3_1:59837849-59837868 None:intergenic 30.0%
!!! ACTCTTCGTTTTTTCTTTCT+TGG + chr3_1:59838114-59838133 Msa0365620:intron 30.0%
AGATATGTCAGCATTTAAAG+CGG + chr3_1:59838234-59838253 Msa0365620:CDS 30.0%
GAAATTTGTGGAGAAAGATT+TGG + chr3_1:59838431-59838450 Msa0365620:CDS 30.0%
!! ACTTTTTCTCCTTCTCTATT+TGG - chr3_1:59838505-59838524 None:intergenic 30.0%
TTATTCACGGTAAGGAAAAA+AGG - chr3_1:59838690-59838709 None:intergenic 30.0%
AATAAGACTTATTCACGGTA+AGG - chr3_1:59838698-59838717 None:intergenic 30.0%
ATGTCAAAAGACAAGAAAAG+TGG + chr3_1:59838854-59838873 Msa0365620:intron 30.0%
TGTTTCAATAGAATGAGTCA+TGG + chr3_1:59838934-59838953 Msa0365620:intron 30.0%
CATTTCAATAGAATGAGTCA+TGG + chr3_1:59838962-59838981 Msa0365620:intron 30.0%
ATCTCTAGTGTGAATCTATT+GGG - chr3_1:59839048-59839067 None:intergenic 30.0%
AATCTCTAGTGTGAATCTAT+TGG - chr3_1:59839049-59839068 None:intergenic 30.0%
!! GATTGGTTTCAATCAAGTAT+TGG + chr3_1:59839075-59839094 Msa0365620:intron 30.0%
!!! AATTTTTTGGGATTTTGAGG+AGG - chr3_1:59839147-59839166 None:intergenic 30.0%
AAAAGGTAAAAAAAGGAGCA+TGG - chr3_1:59839303-59839322 None:intergenic 30.0%
!!! CCAGAAATATTTTAATGAGG+GGG - chr3_1:59839444-59839463 None:intergenic 30.0%
!!! GCCAGAAATATTTTAATGAG+GGG - chr3_1:59839445-59839464 None:intergenic 30.0%
!!! GAGCCAGAAATATTTTAATG+AGG - chr3_1:59839447-59839466 None:intergenic 30.0%
! TAGTCCTTTTCCTTTCATTA+TGG - chr3_1:59839766-59839785 None:intergenic 30.0%
TTTCAAGATAATGAAGAACC+TGG - chr3_1:59839839-59839858 None:intergenic 30.0%
ATTTGTTCAAGCAATTGATG+TGG - chr3_1:59839870-59839889 None:intergenic 30.0%
ACATCAATTGCTTGAACAAA+TGG + chr3_1:59839869-59839888 Msa0365620:CDS 30.0%
AATAACTAGTTACCTTGTAG+AGG - chr3_1:59840011-59840030 None:intergenic 30.0%
TGAAATCCATGTCACTAAAA+TGG - chr3_1:59840367-59840386 None:intergenic 30.0%
ATGGATTTCATCTATCTTTC+TGG + chr3_1:59840377-59840396 Msa0365620:intron 30.0%
TTCTTCCATGTCTTCAACTT+CGG - chr3_1:59827948-59827967 None:intergenic 35.0%
! CTGAAATAGAGGCTTTTTGT+AGG + chr3_1:59828247-59828266 Msa0365620:intron 35.0%
! AAGTTCAGTTTGGATGGATT+TGG + chr3_1:59828351-59828370 Msa0365620:intron 35.0%
ACGATTACAGTAAGATACGT+CGG - chr3_1:59828664-59828683 None:intergenic 35.0%
! GTTGTGTTGATGGAAATAGT+GGG + chr3_1:59828754-59828773 Msa0365620:intron 35.0%
! TTGTGTTGATGGAAATAGTG+GGG + chr3_1:59828755-59828774 Msa0365620:intron 35.0%
! ACTTTTGTCCCTATTGAAAC+CGG + chr3_1:59828800-59828819 Msa0365620:intron 35.0%
!! TAACAACACCGGTTTCAATA+GGG - chr3_1:59828811-59828830 None:intergenic 35.0%
!! TTAACAACACCGGTTTCAAT+AGG - chr3_1:59828812-59828831 None:intergenic 35.0%
GTTAAATAGCACAGCTATAG+CGG + chr3_1:59828827-59828846 Msa0365620:intron 35.0%
CGTTCAAGTCCAAAAAGAAA+TGG - chr3_1:59829050-59829069 None:intergenic 35.0%
ACATCCTGTAACTTTGTTCT+AGG + chr3_1:59829071-59829090 Msa0365620:intron 35.0%
GTATTCTGGCAATTTGTACA+AGG + chr3_1:59829116-59829135 Msa0365620:five_prime_UTR 35.0%
TTGCTTTGTCGAATTGTTCA+AGG + chr3_1:59829528-59829547 Msa0365620:five_prime_UTR 35.0%
TAACTATTGCTCGTTGTTTG+TGG + chr3_1:59829551-59829570 Msa0365620:intron 35.0%
! ATGGAAGCATAAAGCAACAA+GGG - chr3_1:59829889-59829908 None:intergenic 35.0%
! TATGGAAGCATAAAGCAACA+AGG - chr3_1:59829890-59829909 None:intergenic 35.0%
CAACAGTGCTATGATACAAT+TGG + chr3_1:59829925-59829944 Msa0365620:intron 35.0%
AATTACAGGCAGAAGTTTAC+AGG - chr3_1:59830292-59830311 None:intergenic 35.0%
AGTATGCCTTCAGTATCAAA+TGG - chr3_1:59830320-59830339 None:intergenic 35.0%
ATGAACAGATAGATCCAATG+TGG - chr3_1:59830343-59830362 None:intergenic 35.0%
TCATATAGTCCTCATCAAAG+GGG - chr3_1:59830410-59830429 None:intergenic 35.0%
AATGGGATGATGATTGTTCT+TGG + chr3_1:59830496-59830515 Msa0365620:five_prime_UTR 35.0%
CTGTTAGAAATAGCTGTAAG+CGG + chr3_1:59830578-59830597 Msa0365620:intron 35.0%
!! TTGTCATACAAAGCATTGAG+GGG - chr3_1:59830702-59830721 None:intergenic 35.0%
!! GTTTGTCATACAAAGCATTG+AGG - chr3_1:59830704-59830723 None:intergenic 35.0%
TTAGAAGAACGTAGAAAGCA+AGG - chr3_1:59830766-59830785 None:intergenic 35.0%
GGACAAAAAGAACAATAGGT+GGG - chr3_1:59830850-59830869 None:intergenic 35.0%
TGGACAAAAAGAACAATAGG+TGG - chr3_1:59830851-59830870 None:intergenic 35.0%
CCATGGACAAAAAGAACAAT+AGG - chr3_1:59830854-59830873 None:intergenic 35.0%
! CCTATTGTTCTTTTTGTCCA+TGG + chr3_1:59830851-59830870 Msa0365620:intron 35.0%
AAAGGCTAGACATACAGAAT+GGG - chr3_1:59830976-59830995 None:intergenic 35.0%
!! TAGAGCCTTGTTTAATGACT+TGG + chr3_1:59831035-59831054 Msa0365620:intron 35.0%
!! AGAGCCTTGTTTAATGACTT+GGG + chr3_1:59831036-59831055 Msa0365620:intron 35.0%
ATGTCCCAAGTCATTAAACA+AGG - chr3_1:59831043-59831062 None:intergenic 35.0%
TTTATGGATAAGTTGCATGC+AGG + chr3_1:59831160-59831179 Msa0365620:intron 35.0%
GAAGATGGTTGAAAGTTCTA+TGG + chr3_1:59831210-59831229 Msa0365620:five_prime_UTR 35.0%
GGTTGAAAGTTCTATGGAAA+TGG + chr3_1:59831216-59831235 Msa0365620:five_prime_UTR 35.0%
!!! GTTTGGTTTTGATTCTACAG+GGG - chr3_1:59831327-59831346 None:intergenic 35.0%
TAGCAATGAGTCATCATGTT+TGG - chr3_1:59831344-59831363 None:intergenic 35.0%
TGTGAATTGTAATGGTTAGG+TGG + chr3_1:59831518-59831537 Msa0365620:intron 35.0%
GTGAATTGTAATGGTTAGGT+GGG + chr3_1:59831519-59831538 Msa0365620:intron 35.0%
TTGAAGTGGAAATGAAAGGA+TGG - chr3_1:59831564-59831583 None:intergenic 35.0%
!!! GCTTTTGAAGTGGAAATGAA+AGG - chr3_1:59831568-59831587 None:intergenic 35.0%
!! CTCAGTAAATGCTTTTGAAG+TGG - chr3_1:59831578-59831597 None:intergenic 35.0%
!! CACTTCAAAAGCATTTACTG+AGG + chr3_1:59831576-59831595 Msa0365620:intron 35.0%
!! TTGAAGGTTCTAAAGAGAGT+CGG + chr3_1:59831742-59831761 Msa0365620:five_prime_UTR 35.0%
ATCAACAAGAAGATGCAACT+GGG - chr3_1:59831781-59831800 None:intergenic 35.0%
! TGCATTGCAAATGTCATTTG+AGG + chr3_1:59831800-59831819 Msa0365620:five_prime_UTR 35.0%
!! TTCAGCATTTTCCCTTGTTT+TGG + chr3_1:59831947-59831966 Msa0365620:intron 35.0%
GATTTCAAATTATCGGAACC+AGG - chr3_1:59831991-59832010 None:intergenic 35.0%
ATGTTCAATAAATCTGCCAC+TGG + chr3_1:59832153-59832172 Msa0365620:intron 35.0%
TGTTCAATAAATCTGCCACT+GGG + chr3_1:59832154-59832173 Msa0365620:intron 35.0%
ATATCATTGCTTGAAGAGCT+TGG + chr3_1:59832280-59832299 Msa0365620:intron 35.0%
CCACTGTCCAAAAAAATAAG+GGG + chr3_1:59832311-59832330 Msa0365620:intron 35.0%
CACTGTCCAAAAAAATAAGG+GGG + chr3_1:59832312-59832331 Msa0365620:intron 35.0%
ACTGTCCAAAAAAATAAGGG+GGG + chr3_1:59832313-59832332 Msa0365620:intron 35.0%
!!! TGATTCCCCCCTTATTTTTT+TGG - chr3_1:59832321-59832340 None:intergenic 35.0%
! CTTTTTATTACTGCATAGGC+AGG - chr3_1:59832348-59832367 None:intergenic 35.0%
TCCCAGGAAAGAATTATTAC+GGG - chr3_1:59832374-59832393 None:intergenic 35.0%
GGAAATACATAATTGTTCCC+AGG - chr3_1:59832390-59832409 None:intergenic 35.0%
! TATTGCTGGGAATCTAAGAT+TGG - chr3_1:59832436-59832455 None:intergenic 35.0%
TGGAAATCTTTCACCAAAGA+GGG - chr3_1:59832483-59832502 None:intergenic 35.0%
TAACCCAAGTGGTTTAGTAA+TGG + chr3_1:59832603-59832622 Msa0365620:intron 35.0%
AACCCAAGTGGTTTAGTAAT+GGG + chr3_1:59832604-59832623 Msa0365620:intron 35.0%
TACCCATTACTAAACCACTT+GGG - chr3_1:59832609-59832628 None:intergenic 35.0%
CACCATATTAGAACTTGGAT+TGG + chr3_1:59832656-59832675 Msa0365620:intron 35.0%
! ACCCAATCCAAGTTCTAATA+TGG - chr3_1:59832661-59832680 None:intergenic 35.0%
CATAAACAGTCAATCACGTT+CGG + chr3_1:59832810-59832829 Msa0365620:intron 35.0%
CAAATAAAAGAGGGGATAAG+GGG + chr3_1:59832909-59832928 Msa0365620:intron 35.0%
!!! GGGTGTGGTTTTATTTTTGA+TGG + chr3_1:59832968-59832987 Msa0365620:intron 35.0%
GCATACTGGAAAGAAAAAAG+CGG + chr3_1:59833069-59833088 Msa0365620:intron 35.0%
!! CATTGGTTTCCAAGAACATT+AGG + chr3_1:59833471-59833490 Msa0365620:intron 35.0%
TAAGTGGTACCTAATGTTCT+TGG - chr3_1:59833483-59833502 None:intergenic 35.0%
!!! GTGCTCATAGTTGTTTTTTC+TGG - chr3_1:59833509-59833528 None:intergenic 35.0%
!! TTTTTGTTTACATGGGAGAC+AGG - chr3_1:59833561-59833580 None:intergenic 35.0%
ATAAGTGATGTAATCTCTGC+AGG + chr3_1:59833766-59833785 Msa0365620:intron 35.0%
TGGTATGTACCAAAAGACTT+TGG + chr3_1:59833915-59833934 Msa0365620:intron 35.0%
GGTATGTACCAAAAGACTTT+GGG + chr3_1:59833916-59833935 Msa0365620:intron 35.0%
! CAAACAAACCCAAAGTCTTT+TGG - chr3_1:59833927-59833946 None:intergenic 35.0%
TTCTTTCCTACTCTAGGTTT+AGG - chr3_1:59833958-59833977 None:intergenic 35.0%
AGCTTTCAATATGCATTGAG+AGG + chr3_1:59834526-59834545 Msa0365620:intron 35.0%
GAAGATTATCAGGACTGTAT+CGG + chr3_1:59834564-59834583 Msa0365620:five_prime_UTR 35.0%
TCATATAGATTCCATGACTG+AGG + chr3_1:59834596-59834615 Msa0365620:five_prime_UTR 35.0%
!! ACTGGTCTTGTTTAAATTGC+AGG + chr3_1:59834722-59834741 Msa0365620:intron 35.0%
TAAATTGCAGGAAGAAAGTG+TGG + chr3_1:59834734-59834753 Msa0365620:intron 35.0%
GGAAGAAATAGCAATAAGAG+AGG - chr3_1:59834905-59834924 None:intergenic 35.0%
AGTAAGTGACCCAAAAAATC+AGG + chr3_1:59835158-59835177 Msa0365620:intron 35.0%
GCACATCCTATATATGTTGT+TGG - chr3_1:59835188-59835207 None:intergenic 35.0%
CTGGTTCCTATTAGATGATA+TGG - chr3_1:59835218-59835237 None:intergenic 35.0%
TCATCTAATAGGAACCAGAA+AGG + chr3_1:59835220-59835239 Msa0365620:intron 35.0%
AGGGAACATGAATATTGTGA+AGG - chr3_1:59835461-59835480 None:intergenic 35.0%
AGAATGACAAATTGAAGGAG+GGG - chr3_1:59835492-59835511 None:intergenic 35.0%
GAGAATGACAAATTGAAGGA+GGG - chr3_1:59835493-59835512 None:intergenic 35.0%
GATGGAGAATGACAAATTGA+AGG - chr3_1:59835497-59835516 None:intergenic 35.0%
CTCCATCTTATTCCCTTTAA+TGG + chr3_1:59835510-59835529 Msa0365620:intron 35.0%
!!! GCCCAGTCCATATTTTAATA+TGG - chr3_1:59835544-59835563 None:intergenic 35.0%
TAAATTCGAGGTTAGTAGTG+GGG - chr3_1:59835607-59835626 None:intergenic 35.0%
GTTAAATTCGAGGTTAGTAG+TGG - chr3_1:59835609-59835628 None:intergenic 35.0%
TACGTCCAGTTTCAAAAACA+TGG + chr3_1:59835720-59835739 Msa0365620:intron 35.0%
!!! AGAAGCCATGTTTTTGAAAC+TGG - chr3_1:59835728-59835747 None:intergenic 35.0%
AAAGCAAGAGCTACATAACA+TGG - chr3_1:59835981-59836000 None:intergenic 35.0%
ACGAGTTTGTAACTTGAATG+AGG - chr3_1:59836037-59836056 None:intergenic 35.0%
TTATACAGGTCTGTAACTTC+AGG - chr3_1:59836162-59836181 None:intergenic 35.0%
GCTTACAAATGAATCACCAA+TGG - chr3_1:59836442-59836461 None:intergenic 35.0%
CAATGCATGTGTCAATAGAT+TGG - chr3_1:59836701-59836720 None:intergenic 35.0%
CAATCTATTGACACATGCAT+TGG + chr3_1:59836699-59836718 Msa0365620:intron 35.0%
TTAACTCAATGGTCATGTCA+GGG - chr3_1:59836813-59836832 None:intergenic 35.0%
ATACATGCAGGTAAATGAGA+GGG - chr3_1:59837030-59837049 None:intergenic 35.0%
GTATCACTGAGAATTGTAGT+TGG - chr3_1:59837080-59837099 None:intergenic 35.0%
!!! TTCACTTTTTCAGTCCTAAG+AGG - chr3_1:59837240-59837259 None:intergenic 35.0%
TACAGCACTATAAGTAAGTC+TGG + chr3_1:59837352-59837371 Msa0365620:intron 35.0%
!! TATAAGTAAGTCTGGTCTTG+AGG + chr3_1:59837360-59837379 Msa0365620:intron 35.0%
GCTTCTTTCCCATTTGAATT+TGG + chr3_1:59837532-59837551 Msa0365620:intron 35.0%
GAAGTTTGAACTCTAACTTG+CGG + chr3_1:59837580-59837599 Msa0365620:intron 35.0%
GAAAAGGATATCCTAACTTC+AGG + chr3_1:59837686-59837705 Msa0365620:five_prime_UTR 35.0%
TTTCAATTAGTTACTGGCGT+AGG - chr3_1:59837843-59837862 None:intergenic 35.0%
TGACAGACAAAAAATGGCTT+TGG + chr3_1:59838204-59838223 Msa0365620:intron 35.0%
AAGTCTTCAAAAGTAGCATC+TGG - chr3_1:59838265-59838284 None:intergenic 35.0%
!! CTTTTGAAGACTTTATTCGG+TGG + chr3_1:59838272-59838291 Msa0365620:CDS 35.0%
! GAAGCTTTCTAAGAGAATGT+CGG + chr3_1:59838402-59838421 Msa0365620:CDS 35.0%
TCTCTATTTGGATCAAGAAG+AGG - chr3_1:59838493-59838512 None:intergenic 35.0%
CTTCTTGATCCAAATAGAGA+AGG + chr3_1:59838493-59838512 Msa0365620:CDS 35.0%
! CACTAGAGATTCGTATTGAT+TGG + chr3_1:59839058-59839077 Msa0365620:intron 35.0%
AAAATGCTTGTGTTGTACCA+GGG + chr3_1:59839371-59839390 Msa0365620:intron 35.0%
CCCCCTCATTAAAATATTTC+TGG + chr3_1:59839441-59839460 Msa0365620:intron 35.0%
!! AAAGCAGATGTGTGGTTTTA+TGG + chr3_1:59839714-59839733 Msa0365620:intron 35.0%
!!! AAGCAGATGTGTGGTTTTAT+GGG + chr3_1:59839715-59839734 Msa0365620:intron 35.0%
AAGGACTACTTGTACGTATT+TGG + chr3_1:59839778-59839797 Msa0365620:intron 35.0%
TCAATTGCTTGAACAAATGG+TGG + chr3_1:59839872-59839891 Msa0365620:CDS 35.0%
TTATGGAGAACTGAAACAGA+TGG + chr3_1:59839938-59839957 Msa0365620:CDS 35.0%
TCAACAACTTTATCCTACCA+TGG + chr3_1:59839971-59839990 Msa0365620:CDS 35.0%
GAAAGAAGAGGTTGTTGAAA+AGG + chr3_1:59840275-59840294 Msa0365620:CDS 35.0%
!! TCCTTACCATTTTAGTGACA+TGG + chr3_1:59840358-59840377 Msa0365620:intron 35.0%
TCCATGTCACTAAAATGGTA+AGG - chr3_1:59840362-59840381 None:intergenic 35.0%
! TTCATCTATCTTTCTGGCAT+AGG + chr3_1:59840383-59840402 Msa0365620:intron 35.0%
TTGACAAGAAACAAGCAGTA+AGG + chr3_1:59840409-59840428 Msa0365620:CDS 35.0%
TTGACAACACTTCTCTTTCA+TGG - chr3_1:59840437-59840456 None:intergenic 35.0%
TCAAAACCTTTCTCCAAGAT+TGG - chr3_1:59840485-59840504 None:intergenic 35.0%
AAAATAATCTCCCTGAGGAT+TGG - chr3_1:59840537-59840556 None:intergenic 35.0%
! GTTTATTGGTCTCAAACTCA+TGG + chr3_1:59840708-59840727 Msa0365620:three_prime_UTR 35.0%
! CGATCATATCTGAGATTCGA+TGG + chr3_1:59827856-59827875 Msa0365620:five_prime_UTR 40.0%
TCATCGTCATCAGTAGAATC+AGG - chr3_1:59827920-59827939 None:intergenic 40.0%
ATGGAAGAAGATGAAGACGT+AGG + chr3_1:59827959-59827978 Msa0365620:intron 40.0%
! TAGAGGCTTTTTGTAGGTTC+TGG + chr3_1:59828253-59828272 Msa0365620:intron 40.0%
TAAGTATGGCGTTGTGTTGA+TGG + chr3_1:59828744-59828763 Msa0365620:intron 40.0%
! CGTTGTGTTGATGGAAATAG+TGG + chr3_1:59828753-59828772 Msa0365620:intron 40.0%
!! GCTGTGCTATTTAACAACAC+CGG - chr3_1:59828822-59828841 None:intergenic 40.0%
TGCCTTGAAAACTTACAGCA+TGG + chr3_1:59829158-59829177 Msa0365620:five_prime_UTR 40.0%
! CTCCATGCTGTAAGTTTTCA+AGG - chr3_1:59829163-59829182 None:intergenic 40.0%
!!! TATTTTGAGACCAACCCTTC+TGG + chr3_1:59829186-59829205 Msa0365620:five_prime_UTR 40.0%
! ATGGTTAGTAGGTTGAGGTT+TGG + chr3_1:59829221-59829240 Msa0365620:intron 40.0%
! TGGTTAGTAGGTTGAGGTTT+GGG + chr3_1:59829222-59829241 Msa0365620:intron 40.0%
CAAGCCTGCAAATTGGAATT+TGG + chr3_1:59829296-59829315 Msa0365620:five_prime_UTR 40.0%
CACGATCTGCAGTTATGTTT+CGG + chr3_1:59829324-59829343 Msa0365620:five_prime_UTR 40.0%
! GCAGTTATGTTTCGGTGTAA+AGG + chr3_1:59829332-59829351 Msa0365620:five_prime_UTR 40.0%
! AACTTTGGCTTCGAAGTTTG+TGG + chr3_1:59829616-59829635 Msa0365620:intron 40.0%
CCAATATAAGCTTTCCGAGA+AGG - chr3_1:59829666-59829685 None:intergenic 40.0%
CCTTCTCGGAAAGCTTATAT+TGG + chr3_1:59829663-59829682 Msa0365620:five_prime_UTR 40.0%
GAGACAGGAACTCACAAATT+TGG - chr3_1:59829799-59829818 None:intergenic 40.0%
CTTTACATAGAAGAACAGCC+TGG - chr3_1:59830246-59830265 None:intergenic 40.0%
TTACTGGTGAGACATCAAGT+GGG + chr3_1:59830469-59830488 Msa0365620:five_prime_UTR 40.0%
ATGATTGTTCTTGGAGTGAG+TGG + chr3_1:59830505-59830524 Msa0365620:five_prime_UTR 40.0%
TCTGCAGAAGATCCTGTTAA+AGG + chr3_1:59830531-59830550 Msa0365620:five_prime_UTR 40.0%
!! TGTCATACAAAGCATTGAGG+GGG - chr3_1:59830701-59830720 None:intergenic 40.0%
AGAAAATCATTAGCTCCTCG+TGG - chr3_1:59830906-59830925 None:intergenic 40.0%
GAAAGGCTAGACATACAGAA+TGG - chr3_1:59830977-59830996 None:intergenic 40.0%
GGAATTGAGATCTGTCTGAA+AGG - chr3_1:59830994-59831013 None:intergenic 40.0%
CTCATGAAAACAGCAAAGCA+TGG - chr3_1:59831109-59831128 None:intergenic 40.0%
CACAATATGGTCAGAGAAGA+TGG + chr3_1:59831195-59831214 Msa0365620:five_prime_UTR 40.0%
TTCTATGGAAATGGCTGAAC+TGG + chr3_1:59831225-59831244 Msa0365620:five_prime_UTR 40.0%
AGAAGTGGTTGATCTCTCTA+AGG + chr3_1:59831272-59831291 Msa0365620:five_prime_UTR 40.0%
GACGCAATTACTACGAAAAC+TGG + chr3_1:59831677-59831696 Msa0365620:intron 40.0%
!! TGAAGGTTCTAAAGAGAGTC+GGG + chr3_1:59831743-59831762 Msa0365620:five_prime_UTR 40.0%
CATCAACAAGAAGATGCAAC+TGG - chr3_1:59831782-59831801 None:intergenic 40.0%
!!! TTTTCCCTTGTTTTGGCTTG+TGG + chr3_1:59831954-59831973 Msa0365620:intron 40.0%
ACTGTAAGAACAGACTCTAG+TGG - chr3_1:59832121-59832140 None:intergenic 40.0%
!!! CCCCTTATTTTTTTGGACAG+TGG - chr3_1:59832314-59832333 None:intergenic 40.0%
TCCCCGTAATAATTCTTTCC+TGG + chr3_1:59832369-59832388 Msa0365620:intron 40.0%
CCCAGGAAAGAATTATTACG+GGG - chr3_1:59832373-59832392 None:intergenic 40.0%
CCCCGTAATAATTCTTTCCT+GGG + chr3_1:59832370-59832389 Msa0365620:intron 40.0%
GTGGAAATCTTTCACCAAAG+AGG - chr3_1:59832484-59832503 None:intergenic 40.0%
AGACTTGAGATCCCCATATT+AGG - chr3_1:59832538-59832557 None:intergenic 40.0%
CTACCCATTACTAAACCACT+TGG - chr3_1:59832610-59832629 None:intergenic 40.0%
CTGACTCAACTCTACAAATC+CGG + chr3_1:59832681-59832700 Msa0365620:intron 40.0%
! CTCTACAAATCCGGCTTTTA+AGG + chr3_1:59832690-59832709 Msa0365620:intron 40.0%
TATGCTCAAAAGTTGACGTG+TGG - chr3_1:59832794-59832813 None:intergenic 40.0%
GGTTGATTAGACGTTCTCAA+TGG + chr3_1:59833005-59833024 Msa0365620:intron 40.0%
GGAAAAACAATGTTGGGAAG+TGG + chr3_1:59833026-59833045 Msa0365620:intron 40.0%
! TTTTCTTTCCAGTATGCCGA+TGG - chr3_1:59833066-59833085 None:intergenic 40.0%
! GACATGCTGGTATATTTTGC+TGG + chr3_1:59833705-59833724 Msa0365620:intron 40.0%
! ATTCTCAGATTTTGCCGATG+AGG + chr3_1:59833795-59833814 Msa0365620:five_prime_UTR 40.0%
! TTCTCAGATTTTGCCGATGA+GGG + chr3_1:59833796-59833815 Msa0365620:five_prime_UTR 40.0%
!! CGAAGTCTTATTTCCCTCAT+CGG - chr3_1:59833812-59833831 None:intergenic 40.0%
TAAGACTTCGCGATCTGTAA+AGG + chr3_1:59833822-59833841 Msa0365620:five_prime_UTR 40.0%
AAGACTTCGCGATCTGTAAA+GGG + chr3_1:59833823-59833842 Msa0365620:five_prime_UTR 40.0%
TTTGGCAACTGCAATATACG+TGG + chr3_1:59833895-59833914 Msa0365620:five_prime_UTR 40.0%
GATCAGTTCTTTCCTACTCT+AGG - chr3_1:59833964-59833983 None:intergenic 40.0%
CTCTATCCATAGCACAGAAA+TGG - chr3_1:59834072-59834091 None:intergenic 40.0%
! ATGGATAGAGTTTGTTCGAG+AGG + chr3_1:59834082-59834101 Msa0365620:five_prime_UTR 40.0%
! TAGAGTTTGTTCGAGAGGTT+AGG + chr3_1:59834087-59834106 Msa0365620:five_prime_UTR 40.0%
AAGAGTCACAACCATTACCT+AGG + chr3_1:59834120-59834139 Msa0365620:five_prime_UTR 40.0%
TTTCCCTACCTTTGATGTCT+TGG + chr3_1:59834447-59834466 Msa0365620:intron 40.0%
ATTCTAGGCCAAGACATCAA+AGG - chr3_1:59834458-59834477 None:intergenic 40.0%
!!! ACACCCAGTGAGATTTTTTC+CGG + chr3_1:59834783-59834802 Msa0365620:five_prime_UTR 40.0%
TTCCCGGAAAAAATCTCACT+GGG - chr3_1:59834789-59834808 None:intergenic 40.0%
TTTCCCGGAAAAAATCTCAC+TGG - chr3_1:59834790-59834809 None:intergenic 40.0%
!!! TTTTTTCCGGGAAAGTTGAC+AGG + chr3_1:59834796-59834815 Msa0365620:five_prime_UTR 40.0%
CAACGAAGATTGGAAGTGAT+TGG - chr3_1:59834940-59834959 None:intergenic 40.0%
AAGTGACCCAAAAAATCAGG+TGG + chr3_1:59835161-59835180 Msa0365620:intron 40.0%
! ATAGCTGAAACCCTTTTCTG+AGG + chr3_1:59835398-59835417 Msa0365620:intron 40.0%
GAATGACAAATTGAAGGAGG+GGG - chr3_1:59835491-59835510 None:intergenic 40.0%
GGAGAATGACAAATTGAAGG+AGG - chr3_1:59835494-59835513 None:intergenic 40.0%
GCCCATTAAAGGGAATAAGA+TGG - chr3_1:59835515-59835534 None:intergenic 40.0%
ATGGTGATAGGCCCATTAAA+GGG - chr3_1:59835525-59835544 None:intergenic 40.0%
TATGGTGATAGGCCCATTAA+AGG - chr3_1:59835526-59835545 None:intergenic 40.0%
GACGTATCATTAACTCAGTG+AGG - chr3_1:59835706-59835725 None:intergenic 40.0%
! TTTTCGAAAATCACTGTGCC+CGG + chr3_1:59835947-59835966 Msa0365620:intron 40.0%
TTCAGGCTTTCTGTTAACAG+TGG - chr3_1:59836145-59836164 None:intergenic 40.0%
TCTTCAGACTTAACTAGGAG+AGG + chr3_1:59836192-59836211 Msa0365620:five_prime_UTR 40.0%
CGAAGAATACTACACTGACA+AGG - chr3_1:59836316-59836335 None:intergenic 40.0%
ATGTCTTCTGTCATAAGAGG+TGG - chr3_1:59836390-59836409 None:intergenic 40.0%
TGCATGTCTTCTGTCATAAG+AGG - chr3_1:59836393-59836412 None:intergenic 40.0%
TGAAATCTGAGAGGTCTATG+GGG - chr3_1:59836553-59836572 None:intergenic 40.0%
GTGAAATCTGAGAGGTCTAT+GGG - chr3_1:59836554-59836573 None:intergenic 40.0%
TGTGAAATCTGAGAGGTCTA+TGG - chr3_1:59836555-59836574 None:intergenic 40.0%
AGACCTCTCAGATTTCACAT+AGG + chr3_1:59836556-59836575 Msa0365620:intron 40.0%
GACCTCTCAGATTTCACATA+GGG + chr3_1:59836557-59836576 Msa0365620:intron 40.0%
ACCTCTCAGATTTCACATAG+GGG + chr3_1:59836558-59836577 Msa0365620:intron 40.0%
!! AGATTAAATTGGTGCTGCAG+TGG + chr3_1:59836625-59836644 Msa0365620:intron 40.0%
!! ATAGATTGGCTCAAGTTGGT+TGG - chr3_1:59836687-59836706 None:intergenic 40.0%
! GTCAATAGATTGGCTCAAGT+TGG - chr3_1:59836691-59836710 None:intergenic 40.0%
GTTAACTCAATGGTCATGTC+AGG - chr3_1:59836814-59836833 None:intergenic 40.0%
CATACATGCAGGTAAATGAG+AGG - chr3_1:59837031-59837050 None:intergenic 40.0%
CTACAATTCTCAGTGATACG+TGG + chr3_1:59837081-59837100 Msa0365620:intron 40.0%
! ACAGAATTTTTCTGCTCAGC+TGG + chr3_1:59837664-59837683 Msa0365620:intron 40.0%
! TTTTTCTGCTCAGCTGGAAA+AGG + chr3_1:59837670-59837689 Msa0365620:five_prime_UTR 40.0%
!! TTATTTTGTGCTAGTGCCAG+TGG + chr3_1:59838063-59838082 Msa0365620:intron 40.0%
ATTACGAACAATGTGGGAAG+TGG + chr3_1:59838597-59838616 Msa0365620:intron 40.0%
!! TCAAGTATTGGATCGAGATC+AGG + chr3_1:59839087-59839106 Msa0365620:intron 40.0%
!! CAAGTATTGGATCGAGATCA+GGG + chr3_1:59839088-59839107 Msa0365620:intron 40.0%
!! AAGTATTGGATCGAGATCAG+GGG + chr3_1:59839089-59839108 Msa0365620:intron 40.0%
ATGTGAGTGATGTACTCTAG+TGG + chr3_1:59839240-59839259 Msa0365620:intron 40.0%
! GTAAAAAAAGGAGCATGGCA+GGG - chr3_1:59839298-59839317 None:intergenic 40.0%
CAAAATGCTTGTGTTGTACC+AGG + chr3_1:59839370-59839389 Msa0365620:intron 40.0%
AAATAATGGTTGTGTGACCC+TGG - chr3_1:59839391-59839410 None:intergenic 40.0%
ATACAACTCGTAACACAGTC+AGG + chr3_1:59839481-59839500 Msa0365620:intron 40.0%
TACAACTCGTAACACAGTCA+GGG + chr3_1:59839482-59839501 Msa0365620:intron 40.0%
TAGTCACTATTGCAACTAGG+AGG - chr3_1:59839543-59839562 None:intergenic 40.0%
TCCTAGTTGCAATAGTGACT+AGG + chr3_1:59839542-59839561 Msa0365620:intron 40.0%
CCTAGTTGCAATAGTGACTA+GGG + chr3_1:59839543-59839562 Msa0365620:intron 40.0%
CGGTATCGCAAGAGTTAATA+AGG + chr3_1:59839588-59839607 Msa0365620:intron 40.0%
!! TATGGCTTTATTAACCGAGC+AGG - chr3_1:59839658-59839677 None:intergenic 40.0%
AACCACTTATCTGTGCACTA+TGG - chr3_1:59839676-59839695 None:intergenic 40.0%
!! TATGGGAAAAGTGTCCATGT+TGG + chr3_1:59839732-59839751 Msa0365620:intron 40.0%
! CCTTTTCCTTTCATTATGGC+AGG - chr3_1:59839762-59839781 None:intergenic 40.0%
CCTGCCATAATGAAAGGAAA+AGG + chr3_1:59839759-59839778 Msa0365620:intron 40.0%
AAGCAATTGATGTGGTCGTA+AGG - chr3_1:59839862-59839881 None:intergenic 40.0%
! ACGCTAAGTCAGACTAGTTA+TGG + chr3_1:59839921-59839940 Msa0365620:CDS 40.0%
AAAATTTCTCTTGAGAGCCG+TGG - chr3_1:59840210-59840229 None:intergenic 40.0%
TGGTAAGGAAGACTTATCTG+TGG - chr3_1:59840347-59840366 None:intergenic 40.0%
AGCTAACCAATCTTGGAGAA+AGG + chr3_1:59840476-59840495 Msa0365620:CDS 40.0%
!!! TTGGAGAAAGGTTTTGAGCA+TGG + chr3_1:59840488-59840507 Msa0365620:CDS 40.0%
!!! TGGAGAAAGGTTTTGAGCAT+GGG + chr3_1:59840489-59840508 Msa0365620:CDS 40.0%
AGCATGGGAAATCTTCTCAA+TGG + chr3_1:59840504-59840523 Msa0365620:CDS 40.0%
GCGAAAAAATAATCTCCCTG+AGG - chr3_1:59840542-59840561 None:intergenic 40.0%
CGTCATCAGTAGAATCAGGT+AGG - chr3_1:59827916-59827935 None:intergenic 45.0%
ACACACCGAAGTTGAAGACA+TGG + chr3_1:59827940-59827959 Msa0365620:five_prime_UTR 45.0%
ATTTCACCCTTGCTTCTTCC+TGG + chr3_1:59828089-59828108 Msa0365620:five_prime_UTR 45.0%
TTTCACCCTTGCTTCTTCCT+GGG + chr3_1:59828090-59828109 Msa0365620:five_prime_UTR 45.0%
CTGAAATAGAGGCTGTTTGC+CGG + chr3_1:59828560-59828579 Msa0365620:five_prime_UTR 45.0%
! GCAGTTCTCTTGGAGTATTC+TGG + chr3_1:59829102-59829121 Msa0365620:five_prime_UTR 45.0%
TGTAGTTCTTGATGCACCAG+AGG + chr3_1:59829478-59829497 Msa0365620:five_prime_UTR 45.0%
TCGTGAACTGGAACAAATGC+TGG - chr3_1:59829642-59829661 None:intergenic 45.0%
TTCCAGTTCACGATCCTTCT+CGG + chr3_1:59829649-59829668 Msa0365620:five_prime_UTR 45.0%
! TGGGCACTGTATTCACTAGA+AGG + chr3_1:59829697-59829716 Msa0365620:five_prime_UTR 45.0%
! AGGTTTGAAGCAGATCGCAT+TGG + chr3_1:59829717-59829736 Msa0365620:five_prime_UTR 45.0%
! ACTGAAGGCATACTCCACAT+TGG + chr3_1:59830326-59830345 Msa0365620:intron 45.0%
CTTACTGGTGAGACATCAAG+TGG + chr3_1:59830468-59830487 Msa0365620:five_prime_UTR 45.0%
AGACATCAAGTGGGACACAA+TGG + chr3_1:59830478-59830497 Msa0365620:five_prime_UTR 45.0%
GACATCAAGTGGGACACAAT+GGG + chr3_1:59830479-59830498 Msa0365620:five_prime_UTR 45.0%
!! GTCATACAAAGCATTGAGGG+GGG - chr3_1:59830700-59830719 None:intergenic 45.0%
GGGAAGTCTAACGATTCCTT+TGG + chr3_1:59830873-59830892 Msa0365620:intron 45.0%
AACCACTTCTCAGCTTCATG+AGG - chr3_1:59831262-59831281 None:intergenic 45.0%
AACAAGAAGATGCAACTGGG+AGG - chr3_1:59831778-59831797 None:intergenic 45.0%
! CGGTGAAGGTATAACCATTG+AGG - chr3_1:59832013-59832032 None:intergenic 45.0%
AGCACACGATCTCTAACAGT+CGG - chr3_1:59832033-59832052 None:intergenic 45.0%
ATAAATCTGCCACTGGGACA+AGG + chr3_1:59832160-59832179 Msa0365620:intron 45.0%
!! GACAAGGTACTGGTGTCTTA+GGG + chr3_1:59832176-59832195 Msa0365620:intron 45.0%
! TCTGAAACAAACGCCCTCTT+TGG + chr3_1:59832467-59832486 Msa0365620:intron 45.0%
AAGCCACCTCACACCTAATA+TGG + chr3_1:59832522-59832541 Msa0365620:intron 45.0%
AGCCACCTCACACCTAATAT+GGG + chr3_1:59832523-59832542 Msa0365620:intron 45.0%
AGATCCCCATATTAGGTGTG+AGG - chr3_1:59832531-59832550 None:intergenic 45.0%
TGGGTTACGTTCCAAATGTC+CGG - chr3_1:59832590-59832609 None:intergenic 45.0%
! CATTTGGAACGTAACCCAAG+TGG + chr3_1:59832592-59832611 Msa0365620:intron 45.0%
GCATCGTTCACCTTAAAAGC+CGG - chr3_1:59832703-59832722 None:intergenic 45.0%
AACAGTCAATCACGTTCGGA+CGG + chr3_1:59832814-59832833 Msa0365620:intron 45.0%
ATAAAAGAGGGGATAAGGGG+AGG + chr3_1:59832912-59832931 Msa0365620:intron 45.0%
TAAAAGAGGGGATAAGGGGA+GGG + chr3_1:59832913-59832932 Msa0365620:intron 45.0%
! TTGATGGTTAGGAGTGTGTG+TGG + chr3_1:59832984-59833003 Msa0365620:intron 45.0%
!! GGAACTTTGAAGTCCACCAT+CGG + chr3_1:59833047-59833066 Msa0365620:intron 45.0%
ATGTCTTGCAAAGAACGCCA+AGG - chr3_1:59833690-59833709 None:intergenic 45.0%
TGTGCAAAGAGTGACTCAAG+AGG - chr3_1:59833853-59833872 None:intergenic 45.0%
CTGTAGCCTAAACCTAGAGT+AGG + chr3_1:59833949-59833968 Msa0365620:intron 45.0%
GAAAGAACTGATCACCTACG+TGG + chr3_1:59833971-59833990 Msa0365620:intron 45.0%
TGTCAGCCATTTCTGTGCTA+TGG + chr3_1:59834063-59834082 Msa0365620:intron 45.0%
! AGTTTGTTCGAGAGGTTAGG+TGG + chr3_1:59834090-59834109 Msa0365620:five_prime_UTR 45.0%
GTCACAACCATTACCTAGGA+TGG + chr3_1:59834124-59834143 Msa0365620:five_prime_UTR 45.0%
! TTAGGTGCCATCCTAGGTAA+TGG - chr3_1:59834134-59834153 None:intergenic 45.0%
TTACCTAGGATGGCACCTAA+CGG + chr3_1:59834134-59834153 Msa0365620:five_prime_UTR 45.0%
GAAAGGTCGATTGATCCGTT+AGG - chr3_1:59834152-59834171 None:intergenic 45.0%
AGGCCAAGACATCAAAGGTA+GGG - chr3_1:59834453-59834472 None:intergenic 45.0%
TAGGCCAAGACATCAAAGGT+AGG - chr3_1:59834454-59834473 None:intergenic 45.0%
ATGGTATGTGACCTCAGTCA+TGG - chr3_1:59834610-59834629 None:intergenic 45.0%
! TTGCAGGAAGAAAGTGTGGT+TGG + chr3_1:59834738-59834757 Msa0365620:intron 45.0%
!!! CACCCAGTGAGATTTTTTCC+GGG + chr3_1:59834784-59834803 Msa0365620:five_prime_UTR 45.0%
AGTTCACCTGTCAACTTTCC+CGG - chr3_1:59834805-59834824 None:intergenic 45.0%
TTAGCAAGTGAGAACCTGCT+CGG + chr3_1:59834824-59834843 Msa0365620:intron 45.0%
AGTCCAAGAGATAGCTCTTG+GGG - chr3_1:59835017-59835036 None:intergenic 45.0%
CAGTCCAAGAGATAGCTCTT+GGG - chr3_1:59835018-59835037 None:intergenic 45.0%
TCAGTCCAAGAGATAGCTCT+TGG - chr3_1:59835019-59835038 None:intergenic 45.0%
AAGAGCTATCTCTTGGACTG+AGG + chr3_1:59835018-59835037 Msa0365620:intron 45.0%
AGAGCTATCTCTTGGACTGA+GGG + chr3_1:59835019-59835038 Msa0365620:intron 45.0%
TCACTTACTGATGTCGAGTC+TGG - chr3_1:59835147-59835166 None:intergenic 45.0%
!!! GTTGGGCCACCTGATTTTTT+GGG - chr3_1:59835170-59835189 None:intergenic 45.0%
!!! TGTTGGGCCACCTGATTTTT+TGG - chr3_1:59835171-59835190 None:intergenic 45.0%
GGTGGCCCAACAACATATAT+AGG + chr3_1:59835179-59835198 Msa0365620:intron 45.0%
TAATGGAGCAGTGCTCCTTA+CGG + chr3_1:59835354-59835373 Msa0365620:intron 45.0%
! CTAGGTTGAGTGAAGAAGCA+GGG - chr3_1:59835428-59835447 None:intergenic 45.0%
! TGTGAAGGAAATTTGGGGCT+AGG - chr3_1:59835446-59835465 None:intergenic 45.0%
TGAAGGAGGGGGAAAGAAAA+GGG - chr3_1:59835480-59835499 None:intergenic 45.0%
TTGAAGGAGGGGGAAAGAAA+AGG - chr3_1:59835481-59835500 None:intergenic 45.0%
!!! AAGAGCTTGCTTTTGGGGTT+GGG - chr3_1:59835571-59835590 None:intergenic 45.0%
TCAGTGAGGACACTAGTTCA+TGG - chr3_1:59835692-59835711 None:intergenic 45.0%
! ACATAACATGGAGAGTGCAC+CGG - chr3_1:59835969-59835988 None:intergenic 45.0%
ACAAACTCGTGCCATGTTCT+TGG + chr3_1:59836047-59836066 Msa0365620:intron 45.0%
TTAACTAGGAGAGGTTCAGC+TGG + chr3_1:59836201-59836220 Msa0365620:five_prime_UTR 45.0%
TAGGAGAAACCTGTGTGTAC+GGG - chr3_1:59836275-59836294 None:intergenic 45.0%
GTAGGAGAAACCTGTGTGTA+CGG - chr3_1:59836276-59836295 None:intergenic 45.0%
ACTACACTGACAAGGCCAAA+TGG - chr3_1:59836308-59836327 None:intergenic 45.0%
ATGCAAGCTGTTGAAGCCAT+TGG + chr3_1:59836423-59836442 Msa0365620:five_prime_UTR 45.0%
ACCCCTATGTGAAATCTGAG+AGG - chr3_1:59836562-59836581 None:intergenic 45.0%
!! AATTGGTGCTGCAGTGGTAT+AGG + chr3_1:59836631-59836650 Msa0365620:intron 45.0%
ATTATCTGTGCCTGTGATGC+AGG + chr3_1:59836737-59836756 Msa0365620:intron 45.0%
ATGCAGGCCACTCAATTTCT+TGG + chr3_1:59836753-59836772 Msa0365620:intron 45.0%
!!! GGGTCATCCTTTTTCAAGCT+AGG - chr3_1:59836898-59836917 None:intergenic 45.0%
TTAACTCAATGGTCCTGTCG+CGG - chr3_1:59836926-59836945 None:intergenic 45.0%
ATGCAGGTAAATGAGAGGGA+GGG - chr3_1:59837026-59837045 None:intergenic 45.0%
TTCTCAGTGATACGTGGAAG+TGG + chr3_1:59837087-59837106 Msa0365620:intron 45.0%
!! CTATGTGGATTGGAATCCAC+TGG - chr3_1:59838082-59838101 None:intergenic 45.0%
! TTTATTCGGTGGCATTCACC+TGG + chr3_1:59838283-59838302 Msa0365620:CDS 45.0%
TCTAAGAGAATGTCGGAGCA+CGG + chr3_1:59838409-59838428 Msa0365620:CDS 45.0%
! GGTAAAAAAAGGAGCATGGC+AGG - chr3_1:59839299-59839318 None:intergenic 45.0%
AGTTGTATCTCGAACAGTGG+TGG - chr3_1:59839469-59839488 None:intergenic 45.0%
ACGAGTTGTATCTCGAACAG+TGG - chr3_1:59839472-59839491 None:intergenic 45.0%
CCCTAGTCACTATTGCAACT+AGG - chr3_1:59839546-59839565 None:intergenic 45.0%
AGCCATAGTGCACAGATAAG+TGG + chr3_1:59839671-59839690 Msa0365620:intron 45.0%
AGAAAGGCAAAGCAGATGTG+TGG + chr3_1:59839706-59839725 Msa0365620:intron 45.0%
! TTCAAGCTTGCTCCCATTGT+TGG - chr3_1:59840258-59840277 None:intergenic 45.0%
! CTCCAAGATTGGTTAGCTGT+GGG - chr3_1:59840474-59840493 None:intergenic 45.0%
! TCTCCAAGATTGGTTAGCTG+TGG - chr3_1:59840475-59840494 None:intergenic 45.0%
GATTACCACTCACTCTATCG+TGG - chr3_1:59840566-59840585 None:intergenic 45.0%
AATCACTATGCAGCTCGTAG+CGG + chr3_1:59840582-59840601 Msa0365620:CDS 45.0%
TGACCTACGTGTTGCACTTT+CGG + chr3_1:59840659-59840678 Msa0365620:CDS 45.0%
!!! TATATCATTTTAATTATATT+AGG - chr3_1:59835866-59835885 None:intergenic 5.0%
!! ATTAAATTTAAAGATTAAAT+TGG + chr3_1:59836614-59836633 Msa0365620:intron 5.0%
!!! TTATAATATATGAAATTTTA+AGG + chr3_1:59837963-59837982 Msa0365620:intron 5.0%
!!! TATAATATATGAAATTTTAA+GGG + chr3_1:59837964-59837983 Msa0365620:intron 5.0%
AGGTAGGATCTTCGTCTTGC+CGG - chr3_1:59827900-59827919 None:intergenic 50.0%
GACCATCAGACATCCAAAGC+CGG - chr3_1:59828582-59828601 None:intergenic 50.0%
ACAGTAAGATACGTCGGCAC+CGG - chr3_1:59828658-59828677 None:intergenic 50.0%
GGTAAAAGGGGCAGTTCTCT+TGG + chr3_1:59829092-59829111 Msa0365620:intron 50.0%
! GTAGGTTGAGGTTTGGGTTC+AGG + chr3_1:59829228-59829247 Msa0365620:intron 50.0%
ACTACACCACTTGCACTCTG+AGG - chr3_1:59829464-59829483 None:intergenic 50.0%
!! CTCAACAGTTTGCTAGCCTC+TGG - chr3_1:59829497-59829516 None:intergenic 50.0%
TTCCGAGAAGGATCGTGAAC+TGG - chr3_1:59829654-59829673 None:intergenic 50.0%
! AGCAGATCGCATTGGTAGTC+AGG + chr3_1:59829725-59829744 Msa0365620:five_prime_UTR 50.0%
TCTTACCACTTCCTCCCCTA+GGG + chr3_1:59829960-59829979 Msa0365620:intron 50.0%
TCAAGATGTCCCTTCCCTAG+GGG - chr3_1:59829977-59829996 None:intergenic 50.0%
CTCAAGATGTCCCTTCCCTA+GGG - chr3_1:59829978-59829997 None:intergenic 50.0%
TCTCAAGATGTCCCTTCCCT+AGG - chr3_1:59829979-59829998 None:intergenic 50.0%
CAGAACACTCCCCTTTGATG+AGG + chr3_1:59830398-59830417 Msa0365620:five_prime_UTR 50.0%
GGAATCGTTAGACTTCCCCA+TGG - chr3_1:59830871-59830890 None:intergenic 50.0%
TCCTTTGGATTTCGTCCACG+AGG + chr3_1:59830888-59830907 Msa0365620:intron 50.0%
TCCTCGTGGACGAAATCCAA+AGG - chr3_1:59830892-59830911 None:intergenic 50.0%
CACCTCATGAAGCTGAGAAG+TGG + chr3_1:59831257-59831276 Msa0365620:five_prime_UTR 50.0%
!! GGTTCTAAAGAGAGTCGGGT+TGG + chr3_1:59831747-59831766 Msa0365620:five_prime_UTR 50.0%
GCTGCCACAAGCCAAAACAA+GGG - chr3_1:59831961-59831980 None:intergenic 50.0%
AGCTGCCACAAGCCAAAACA+AGG - chr3_1:59831962-59831981 None:intergenic 50.0%
CTTGTGGCAGCTGAAAATCC+TGG + chr3_1:59831970-59831989 Msa0365620:intron 50.0%
CGATCTCTAACAGTCGGTGA+AGG - chr3_1:59832027-59832046 None:intergenic 50.0%
!! GGACAAGGTACTGGTGTCTT+AGG + chr3_1:59832175-59832194 Msa0365620:intron 50.0%
GCCACCTCACACCTAATATG+GGG + chr3_1:59832524-59832543 Msa0365620:intron 50.0%
TCCCCATATTAGGTGTGAGG+TGG - chr3_1:59832528-59832547 None:intergenic 50.0%
!! GTTCTAGGAGTGAGTGACGT+AGG - chr3_1:59832568-59832587 None:intergenic 50.0%
ACGTCACTCACTCCTAGAAC+CGG + chr3_1:59832568-59832587 Msa0365620:intron 50.0%
CACTCCTAGAACCGGACATT+TGG + chr3_1:59832576-59832595 Msa0365620:intron 50.0%
CGTTCCAAATGTCCGGTTCT+AGG - chr3_1:59832583-59832602 None:intergenic 50.0%
GTGAAATTTAGGTGGGGGTG+TGG + chr3_1:59832953-59832972 Msa0365620:intron 50.0%
TCTTTCCAGTATGCCGATGG+TGG - chr3_1:59833063-59833082 None:intergenic 50.0%
GCGTTCTTTGCAAGACATGC+TGG + chr3_1:59833692-59833711 Msa0365620:intron 50.0%
TTCGAGAGGTTAGGTGGTGT+TGG + chr3_1:59834096-59834115 Msa0365620:five_prime_UTR 50.0%
TCGAGAGGTTAGGTGGTGTT+GGG + chr3_1:59834097-59834116 Msa0365620:five_prime_UTR 50.0%
CAACCCCAAGAGCTATCTCT+TGG + chr3_1:59835011-59835030 Msa0365620:intron 50.0%
TCCAGTCCTAGACGTGAAGA+GGG - chr3_1:59835106-59835125 None:intergenic 50.0%
! GCAGGGTGTTCCTCAGAAAA+GGG - chr3_1:59835411-59835430 None:intergenic 50.0%
! AGCAGGGTGTTCCTCAGAAA+AGG - chr3_1:59835412-59835431 None:intergenic 50.0%
! GCTAGGTTGAGTGAAGAAGC+AGG - chr3_1:59835429-59835448 None:intergenic 50.0%
!!! CTTGCTTTTGGGGTTGGGTT+AGG - chr3_1:59835566-59835585 None:intergenic 50.0%
!!! CAAGAGCTTGCTTTTGGGGT+TGG - chr3_1:59835572-59835591 None:intergenic 50.0%
CAACCCCAAAAGCAAGCTCT+TGG + chr3_1:59835570-59835589 Msa0365620:intron 50.0%
!! ACGCCAAGAGCTTGCTTTTG+GGG - chr3_1:59835576-59835595 None:intergenic 50.0%
!! CACGCCAAGAGCTTGCTTTT+GGG - chr3_1:59835577-59835596 None:intergenic 50.0%
!! TCACGCCAAGAGCTTGCTTT+TGG - chr3_1:59835578-59835597 None:intergenic 50.0%
AAAAGCAAGCTCTTGGCGTG+AGG + chr3_1:59835577-59835596 Msa0365620:intron 50.0%
AAAGCAAGCTCTTGGCGTGA+GGG + chr3_1:59835578-59835597 Msa0365620:intron 50.0%
! CATAACATGGAGAGTGCACC+GGG - chr3_1:59835968-59835987 None:intergenic 50.0%
AGGAGAAACCTGTGTGTACG+GGG - chr3_1:59836274-59836293 None:intergenic 50.0%
TCCTACACCCAGACACCATT+TGG + chr3_1:59836290-59836309 Msa0365620:intron 50.0%
GACAAGGCCAAATGGTGTCT+GGG - chr3_1:59836300-59836319 None:intergenic 50.0%
TGACAAGGCCAAATGGTGTC+TGG - chr3_1:59836301-59836320 None:intergenic 50.0%
AGAGGTCTATGGGGTCTCTA+AGG - chr3_1:59836544-59836563 None:intergenic 50.0%
AATTGAGTGGCCTGCATCAC+AGG - chr3_1:59836750-59836769 None:intergenic 50.0%
TAACTCAATGGTCCTGTCGC+GGG - chr3_1:59836925-59836944 None:intergenic 50.0%
TGCAGGTAAATGAGAGGGAG+GGG - chr3_1:59837025-59837044 None:intergenic 50.0%
CATGCAGGTAAATGAGAGGG+AGG - chr3_1:59837027-59837046 None:intergenic 50.0%
GGGAGACGAAACTCGTTTAG+TGG + chr3_1:59838027-59838046 Msa0365620:intron 50.0%
GTGGCATTCACCTGGAGATT+GGG + chr3_1:59838291-59838310 Msa0365620:CDS 50.0%
TCATCTGCTTCCCAATCTCC+AGG - chr3_1:59838304-59838323 None:intergenic 50.0%
TGATGCTGATCCACTGCTCT+CGG - chr3_1:59838332-59838351 None:intergenic 50.0%
! AAAGATAGTTGGCCTCCACG+TGG + chr3_1:59838379-59838398 Msa0365620:CDS 50.0%
! AAGATAGTTGGCCTCCACGT+GGG + chr3_1:59838380-59838399 Msa0365620:CDS 50.0%
TTAGAAAGCTTCCCACGTGG+AGG - chr3_1:59838394-59838413 None:intergenic 50.0%
CTCTTAGAAAGCTTCCCACG+TGG - chr3_1:59838397-59838416 None:intergenic 50.0%
TGTCGGAGCACGGAAATTTG+TGG + chr3_1:59838419-59838438 Msa0365620:CDS 50.0%
TATTGGATCGAGATCAGGGG+CGG + chr3_1:59839092-59839111 Msa0365620:intron 50.0%
!! TTGGGATTTTGAGGAGGCCA+TGG - chr3_1:59839141-59839160 None:intergenic 50.0%
TCTTGGAATGCTGTCCTGCT+CGG + chr3_1:59839641-59839660 Msa0365620:intron 50.0%
TTATGGCAGGCAAGCCAACA+TGG - chr3_1:59839749-59839768 None:intergenic 50.0%
GGCTTGCCTGCCATAATGAA+AGG + chr3_1:59839753-59839772 Msa0365620:intron 50.0%
CTCAAAGCAGATGCCATGGT+AGG - chr3_1:59839987-59840006 None:intergenic 50.0%
CTACCATGGCATCTGCTTTG+AGG + chr3_1:59839985-59840004 Msa0365620:CDS 50.0%
!! TCTGCTTTGAGGCCTCTACA+AGG + chr3_1:59839996-59840015 Msa0365620:CDS 50.0%
GCAAGCTTATACGAGCACCA+CGG + chr3_1:59840190-59840209 Msa0365620:CDS 50.0%
GGGAGCAAGCTTGAAAGAAG+AGG + chr3_1:59840263-59840282 Msa0365620:CDS 50.0%
! CAAGATTGGTTAGCTGTGGG+AGG - chr3_1:59840471-59840490 None:intergenic 50.0%
CTCCCACAGCTAACCAATCT+TGG + chr3_1:59840469-59840488 Msa0365620:CDS 50.0%
ATGGTCACGAACCAATCCTC+AGG + chr3_1:59840523-59840542 Msa0365620:CDS 50.0%
TGGTCACGAACCAATCCTCA+GGG + chr3_1:59840524-59840543 Msa0365620:CDS 50.0%
! CAACCGAAAGTGCAACACGT+AGG - chr3_1:59840665-59840684 None:intergenic 50.0%
GATCTTCGTCTTGCCGGTGT+TGG - chr3_1:59827894-59827913 None:intergenic 55.0%
CCGTTCCCAGGAAGAAGCAA+GGG - chr3_1:59828098-59828117 None:intergenic 55.0%
CCCTTGCTTCTTCCTGGGAA+CGG + chr3_1:59828095-59828114 Msa0365620:five_prime_UTR 55.0%
ACCGTTCCCAGGAAGAAGCA+AGG - chr3_1:59828099-59828118 None:intergenic 55.0%
ATCAAACACGCACCGTTCCC+AGG - chr3_1:59828110-59828129 None:intergenic 55.0%
!! TAGAGGCTGTTTGCCGGCTT+TGG + chr3_1:59828566-59828585 Msa0365620:five_prime_UTR 55.0%
!! TGCCGGCTTTGGATGTCTGA+TGG + chr3_1:59828577-59828596 Msa0365620:five_prime_UTR 55.0%
TCTTGGCATCCAGATGACGC+AGG + chr3_1:59829273-59829292 Msa0365620:intron 55.0%
ACGCAGGCAAGCCTGCAAAT+TGG + chr3_1:59829289-59829308 Msa0365620:five_prime_UTR 55.0%
ATCGCTCCTCAGAGTGCAAG+TGG + chr3_1:59829455-59829474 Msa0365620:five_prime_UTR 55.0%
GTCTTACCACTTCCTCCCCT+AGG + chr3_1:59829959-59829978 Msa0365620:intron 55.0%
CATTGAGGGGGGTCGAATGT+GGG - chr3_1:59830689-59830708 None:intergenic 55.0%
ACACCAGTACCTTGTCCCAG+TGG - chr3_1:59832172-59832191 None:intergenic 55.0%
GAAGTCCACCATCGGCATAC+TGG + chr3_1:59833055-59833074 Msa0365620:intron 55.0%
! GATCCGTTAGGTGCCATCCT+AGG - chr3_1:59834140-59834159 None:intergenic 55.0%
AGTCCTAGACGTGAAGAGGG+AGG - chr3_1:59835103-59835122 None:intergenic 55.0%
! TCCCTCTTCACGTCTAGGAC+TGG + chr3_1:59835102-59835121 Msa0365620:intron 55.0%
GTCCAGTCCTAGACGTGAAG+AGG - chr3_1:59835107-59835126 None:intergenic 55.0%
TATGCATGCCCCGTACACAC+AGG + chr3_1:59836263-59836282 Msa0365620:five_prime_UTR 55.0%
GCCAAATGGTGTCTGGGTGT+AGG - chr3_1:59836294-59836313 None:intergenic 55.0%
AACTCAATGGTCCTGTCGCG+GGG - chr3_1:59836924-59836943 None:intergenic 55.0%
AGGTAAATGAGAGGGAGGGG+GGG - chr3_1:59837022-59837041 None:intergenic 55.0%
CAGGTAAATGAGAGGGAGGG+GGG - chr3_1:59837023-59837042 None:intergenic 55.0%
GCAGGTAAATGAGAGGGAGG+GGG - chr3_1:59837024-59837043 None:intergenic 55.0%
GGTGGCATTCACCTGGAGAT+TGG + chr3_1:59838290-59838309 Msa0365620:CDS 55.0%
GATGATGATCCCGAGAGCAG+TGG + chr3_1:59838319-59838338 Msa0365620:CDS 55.0%
GATGCTGATCCACTGCTCTC+GGG - chr3_1:59838331-59838350 None:intergenic 55.0%
CTCACCTGCTCTTCCTGCTT+CGG + chr3_1:59838459-59838478 Msa0365620:CDS 55.0%
TGTTCCGAAGCAGGAAGAGC+AGG - chr3_1:59838466-59838485 None:intergenic 55.0%
AGAGGCTTCTGTTCCGAAGC+AGG - chr3_1:59838475-59838494 None:intergenic 55.0%
CGGAACCAGGTAGGGACATA+GGG + chr3_1:59839112-59839131 Msa0365620:intron 55.0%
AACCAGGTAGGGACATAGGG+AGG + chr3_1:59839115-59839134 Msa0365620:intron 55.0%
GGTTAAGCTGCACGCCTTTG+AGG + chr3_1:59839261-59839280 Msa0365620:intron 55.0%
GGGATCAAACCCAGCCTCAA+AGG - chr3_1:59839278-59839297 None:intergenic 55.0%
AGGCCTCAAAGCAGATGCCA+TGG - chr3_1:59839991-59840010 None:intergenic 55.0%
TCGCTCCACGATAGAGTGAG+TGG + chr3_1:59840558-59840577 Msa0365620:CDS 55.0%
GCGTCATCCTCCACCAACAC+CGG + chr3_1:59827878-59827897 Msa0365620:five_prime_UTR 60.0%
! CTTCGTCTTGCCGGTGTTGG+TGG - chr3_1:59827891-59827910 None:intergenic 60.0%
ACCACTTCCTCCCCTAGGGA+AGG + chr3_1:59829964-59829983 Msa0365620:intron 60.0%
CCACTTCCTCCCCTAGGGAA+GGG + chr3_1:59829965-59829984 Msa0365620:intron 60.0%
AGATGTCCCTTCCCTAGGGG+AGG - chr3_1:59829974-59829993 None:intergenic 60.0%
GCATTGAGGGGGGTCGAATG+TGG - chr3_1:59830690-59830709 None:intergenic 60.0%
CTGCCACTGGGACAAGGTAC+TGG + chr3_1:59832166-59832185 Msa0365620:intron 60.0%
CGTTCGGACGGCCCAAGTTT+AGG + chr3_1:59832826-59832845 Msa0365620:intron 60.0%
CAGCCTCCCTCTTCACGTCT+AGG + chr3_1:59835097-59835116 Msa0365620:intron 60.0%
ACTCAATGGTCCTGTCGCGG+GGG - chr3_1:59836923-59836942 None:intergenic 60.0%
ATCAGGGGCGGAACCAGGTA+GGG + chr3_1:59839104-59839123 Msa0365620:intron 60.0%
GCGGAACCAGGTAGGGACAT+AGG + chr3_1:59839111-59839130 Msa0365620:intron 60.0%
GTAGGGACATAGGGAGGCCA+TGG + chr3_1:59839121-59839140 Msa0365620:intron 60.0%
!! AAGCTGCACGCCTTTGAGGC+TGG + chr3_1:59839265-59839284 Msa0365620:intron 60.0%
!! AGCTGCACGCCTTTGAGGCT+GGG + chr3_1:59839266-59839285 Msa0365620:intron 60.0%
GGGCATAAATAACCCCCCCG+TGG + chr3_1:59839502-59839521 Msa0365620:intron 60.0%
AACCCCCCCGTGGTGATTGT+TGG + chr3_1:59839512-59839531 Msa0365620:intron 60.0%
ACCCCCCCGTGGTGATTGTT+GGG + chr3_1:59839513-59839532 Msa0365620:intron 60.0%
TCCGCCCAACAATCACCACG+GGG - chr3_1:59839520-59839539 None:intergenic 60.0%
GTCCGCCCAACAATCACCAC+GGG - chr3_1:59839521-59839540 None:intergenic 60.0%
GGTCCGCCCAACAATCACCA+CGG - chr3_1:59839522-59839541 None:intergenic 60.0%
GGTGGCTACTGCCTTCAGAG+CGG + chr3_1:59839890-59839909 Msa0365620:CDS 60.0%
!! CGTCTTGCCGGTGTTGGTGG+AGG - chr3_1:59827888-59827907 None:intergenic 65.0%
GCAGGCTTGCCTGCGTCATC+TGG - chr3_1:59829285-59829304 None:intergenic 65.0%
CCCTTCCCTAGGGGAGGAAG+TGG - chr3_1:59829968-59829987 None:intergenic 65.0%
AATGGTCCTGTCGCGGGGGT+GGG - chr3_1:59836919-59836938 None:intergenic 65.0%
TCGAGATCAGGGGCGGAACC+AGG + chr3_1:59839099-59839118 Msa0365620:intron 65.0%
GATCAGGGGCGGAACCAGGT+AGG + chr3_1:59839103-59839122 Msa0365620:intron 65.0%
GGCCTCCCTATGTCCCTACC+TGG - chr3_1:59839120-59839139 None:intergenic 65.0%
GCCCAACAATCACCACGGGG+GGG - chr3_1:59839517-59839536 None:intergenic 65.0%
CGCCCAACAATCACCACGGG+GGG - chr3_1:59839518-59839537 None:intergenic 65.0%
CCGCCCAACAATCACCACGG+GGG - chr3_1:59839519-59839538 None:intergenic 65.0%
CCCCCGTGGTGATTGTTGGG+CGG + chr3_1:59839516-59839535 Msa0365620:intron 65.0%
CGTGTCAGCTGCCGCTCTGA+AGG - chr3_1:59839904-59839923 None:intergenic 65.0%
ATGGTCCTGTCGCGGGGGTG+GGG - chr3_1:59836918-59836937 None:intergenic 70.0%
CAATGGTCCTGTCGCGGGGG+TGG - chr3_1:59836920-59836939 None:intergenic 70.0%
GATGACCCCACCCCCGCGAC+AGG + chr3_1:59836910-59836929 Msa0365620:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 59827742 59840764 59827742 ID=Msa0365620;Name=Msa0365620
chr3_1 mRNA 59827742 59840764 59827742 ID=Msa0365620-mRNA-1;Parent=Msa0365620;Name=Msa0365620-mRNA-1;_AED=0.12;_eAED=0.12;_QI=2029|0.95|0.95|1|0.80|0.81|22|66|323
chr3_1 exon 59827742 59827976 59827742 ID=Msa0365620-mRNA-1:exon:11428;Parent=Msa0365620-mRNA-1
chr3_1 exon 59828073 59828116 59828073 ID=Msa0365620-mRNA-1:exon:11429;Parent=Msa0365620-mRNA-1
chr3_1 exon 59828552 59828615 59828552 ID=Msa0365620-mRNA-1:exon:11430;Parent=Msa0365620-mRNA-1
chr3_1 exon 59829093 59829207 59829093 ID=Msa0365620-mRNA-1:exon:11431;Parent=Msa0365620-mRNA-1
chr3_1 exon 59829286 59829362 59829286 ID=Msa0365620-mRNA-1:exon:11432;Parent=Msa0365620-mRNA-1
chr3_1 exon 59829452 59829549 59829452 ID=Msa0365620-mRNA-1:exon:11433;Parent=Msa0365620-mRNA-1
chr3_1 exon 59829632 59829803 59829632 ID=Msa0365620-mRNA-1:exon:11434;Parent=Msa0365620-mRNA-1
chr3_1 exon 59830333 59830552 59830333 ID=Msa0365620-mRNA-1:exon:11435;Parent=Msa0365620-mRNA-1
chr3_1 exon 59831182 59831293 59831182 ID=Msa0365620-mRNA-1:exon:11436;Parent=Msa0365620-mRNA-1
chr3_1 exon 59831740 59831849 59831740 ID=Msa0365620-mRNA-1:exon:11437;Parent=Msa0365620-mRNA-1
chr3_1 exon 59831980 59832072 59831980 ID=Msa0365620-mRNA-1:exon:11438;Parent=Msa0365620-mRNA-1
chr3_1 exon 59833788 59833916 59833788 ID=Msa0365620-mRNA-1:exon:11439;Parent=Msa0365620-mRNA-1
chr3_1 exon 59834069 59834202 59834069 ID=Msa0365620-mRNA-1:exon:11440;Parent=Msa0365620-mRNA-1
chr3_1 exon 59834528 59834617 59834528 ID=Msa0365620-mRNA-1:exon:11441;Parent=Msa0365620-mRNA-1
chr3_1 exon 59834744 59834830 59834744 ID=Msa0365620-mRNA-1:exon:11442;Parent=Msa0365620-mRNA-1
chr3_1 exon 59836155 59836284 59836155 ID=Msa0365620-mRNA-1:exon:11443;Parent=Msa0365620-mRNA-1
chr3_1 exon 59836384 59836455 59836384 ID=Msa0365620-mRNA-1:exon:11444;Parent=Msa0365620-mRNA-1
chr3_1 exon 59837668 59837707 59837668 ID=Msa0365620-mRNA-1:exon:11445;Parent=Msa0365620-mRNA-1
chr3_1 exon 59838210 59838522 59838210 ID=Msa0365620-mRNA-1:exon:11446;Parent=Msa0365620-mRNA-1
chr3_1 exon 59839840 59840017 59839840 ID=Msa0365620-mRNA-1:exon:11447;Parent=Msa0365620-mRNA-1
chr3_1 exon 59840103 59840296 59840103 ID=Msa0365620-mRNA-1:exon:11448;Parent=Msa0365620-mRNA-1
chr3_1 exon 59840405 59840764 59840405 ID=Msa0365620-mRNA-1:exon:11449;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59827742 59827976 59827742 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59828073 59828116 59828073 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59828552 59828615 59828552 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59829093 59829207 59829093 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59829286 59829362 59829286 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59829452 59829549 59829452 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59829632 59829803 59829632 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59830333 59830552 59830333 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59831182 59831293 59831182 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59831740 59831849 59831740 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59831980 59832072 59831980 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59833788 59833916 59833788 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59834069 59834202 59834069 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59834528 59834617 59834528 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59834744 59834830 59834744 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59836155 59836284 59836155 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59836384 59836455 59836384 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59837668 59837707 59837668 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 five_prime_UTR 59838210 59838216 59838210 ID=Msa0365620-mRNA-1:five_prime_utr;Parent=Msa0365620-mRNA-1
chr3_1 CDS 59838217 59838522 59838217 ID=Msa0365620-mRNA-1:cds;Parent=Msa0365620-mRNA-1
chr3_1 CDS 59839840 59840017 59839840 ID=Msa0365620-mRNA-1:cds;Parent=Msa0365620-mRNA-1
chr3_1 CDS 59840103 59840296 59840103 ID=Msa0365620-mRNA-1:cds;Parent=Msa0365620-mRNA-1
chr3_1 CDS 59840405 59840698 59840405 ID=Msa0365620-mRNA-1:cds;Parent=Msa0365620-mRNA-1
chr3_1 three_prime_UTR 59840699 59840764 59840699 ID=Msa0365620-mRNA-1:three_prime_utr;Parent=Msa0365620-mRNA-1
Gene Sequence

>Msa0365620

ATGGCTTTGGTGCTATTAGATATGTCAGCATTTAAAGCGGCGAATCCAGATGCTACTTTTGAAGACTTTATTCGGTGGCATTCACCTGGAGATTGGGAAGCAGATGATGATCCCGAGAGCAGTGGATCAGCATCATCTGATTCTCTTGAAAAAAATAAGTCGAAAGATAGTTGGCCTCCACGTGGGAAGCTTTCTAAGAGAATGTCGGAGCACGGAAATTTGTGGAGAAAGATTTGGAATAGCTCACCTGCTCTTCCTGCTTCGGAACAGAAGCCTCTTCTTGATCCAAATAGAGAAGGAGAAAAAGTTCTTCATTATCTTGAAACCTTACGACCACATCAATTGCTTGAACAAATGGTGGCTACTGCCTTCAGAGCGGCAGCTGACACGCTAAGTCAGACTAGTTATGGAGAACTGAAACAGATGGAGACTAAGATTCAACAACTTTATCCTACCATGGCATCTGCTTTGAGGCCTCTACAAGACAGTGAGACTATTGAAGACTTCAGACGATTGTGTGTTGTTTTTGAACGTGTTGAAAAATTACTGACTGTCGCAGCTTCTCTTCATCGCAAGCTTATACGAGCACCACGGCTCTCAAGAGAAATTTTTAATGATTACTACAACTTTTATATTCCAACAATGGGAGCAAGCTTGAAAGAAGAGGTTGTTGAAAAGGAATTTGACAAGAAACAAGCAGTAAGGAACCATGAAAGAGAAGTGTTGTCAAATATGTTTGTTCCTCCCACAGCTAACCAATCTTGGAGAAAGGTTTTGAGCATGGGAAATCTTCTCAATGGTCACGAACCAATCCTCAGGGAGATTATTTTTTCGCTCCACGATAGAGTGAGTGGTAATCACTATGCAGCTCGTAGCGGTAGTGTTTCTCAAGAAATTGAAACTTACAGAATGTATATATGTGGAACATCTAATGACCTACGTGTTGCACTTTCGGTTGTCTCGTGTGATTAA
Protein sequence

>Msa0365620

MALVLLDMSAFKAANPDATFEDFIRWHSPGDWEADDDPESSGSASSDSLEKNKSKDSWPPRGKLSKRMSEHGNLWRKIWNSSPALPASEQKPLLDPNREGEKVLHYLETLRPHQLLEQMVATAFRAAADTLSQTSYGELKQMETKIQQLYPTMASALRPLQDSETIEDFRRLCVVFERVEKLLTVAASLHRKLIRAPRLSREIFNDYYNFYIPTMGASLKEEVVEKEFDKKQAVRNHEREVLSNMFVPPTANQSWRKVLSMGNLLNGHEPILREIIFSLHDRVSGNHYAARSGSVSQEIETYRMYICGTSNDLRVALSVVSCD*