AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1205370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205370 MtrunA17_Chr4g0054401 97.441 1055 23 2 1 1052 1 1054 0.0 2048
Msa1205370 MtrunA17_Chr7g0220961 31.400 793 503 10 48 824 44 811 4.12e-80 285
Msa1205370 MtrunA17_Chr6g0454711 28.815 878 565 8 12 880 51 877 4.98e-78 279
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205370 AT5G65770.1 53.641 824 375 4 5 825 13 832 0.0 817
Msa1205370 AT5G65770.3 53.641 824 375 4 5 825 13 832 0.0 817
Msa1205370 AT5G65780.2 53.125 832 375 6 5 825 13 840 0.0 803
Msa1205370 AT5G65770.2 51.939 851 375 5 5 825 13 859 0.0 802
Msa1205370 AT1G67230.1 28.347 829 550 8 4 824 12 804 1.34e-70 256
Msa1205370 AT1G13220.3 28.970 825 553 8 11 823 54 857 6.48e-70 254
Msa1205370 AT1G13220.2 28.970 825 553 8 11 823 41 844 7.79e-70 254
Msa1205370 AT1G68790.1 27.690 762 519 5 2 762 24 754 4.06e-57 215
Msa1205370 AT1G13220.1 34.661 251 161 2 11 258 54 304 1.09e-37 146

Find 228 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGGAGTCTTTGGCATCTT+TGG 0.205853 8_1:-61569862 Msa1205370:CDS
CGGCAAATGGGGTATTCTTT+TGG 0.206760 8_1:-61568649 Msa1205370:CDS
CCAACTCATGTTCCCTTTCC+AGG 0.223528 8_1:+61570051 None:intergenic
CATGTTCCCTTTCCAGGATT+TGG 0.226018 8_1:+61570057 None:intergenic
TCTTGTAAGATCTCAGAATT+TGG 0.229655 8_1:-61569733 Msa1205370:CDS
GACTGAAGAATTGAAGAAAT+TGG 0.231000 8_1:-61569055 Msa1205370:CDS
GTTATTTGTGTATAGATAAT+TGG 0.241032 8_1:-61567279 Msa1205370:three_prime_UTR
TTAGATATTACATATATATT+AGG 0.250015 8_1:-61567477 Msa1205370:three_prime_UTR
AGACTCCTGCAGATCTTTCT+TGG 0.253815 8_1:+61569875 None:intergenic
CAGCCCATTCTCGATTTCTT+AGG 0.255277 8_1:+61569175 None:intergenic
ATCTCAGAATTTGGAGCTAT+TGG 0.270107 8_1:-61569724 Msa1205370:CDS
GTATTATGTTGATGCTGTAC+TGG 0.289459 8_1:-61566873 Msa1205370:three_prime_UTR
TGTCAATTACTCCGAGTTCT+AGG 0.290991 8_1:-61573241 Msa1205370:CDS
TTTGAAGACGATCTAATTCC+TGG 0.294334 8_1:+61570683 None:intergenic
GATAACAGGCACTCACTAAA+TGG 0.300038 8_1:-61570461 Msa1205370:intron
CTTCCCGCCTCTTCTCAATA+AGG 0.300382 8_1:+61569367 None:intergenic
TGCAATTGCAAATTGCAATT+AGG 0.310934 8_1:-61567224 Msa1205370:three_prime_UTR
GCCATTCGTTCTTCTGCTCT+TGG 0.314925 8_1:+61568427 None:intergenic
TGAGCGGACTGAGATAAATT+TGG 0.321576 8_1:-61569205 Msa1205370:CDS
TGAAATGCTTAAATCTGATA+TGG 0.322733 8_1:-61568995 Msa1205370:CDS
CATTACTACACGAGCTTCTT+CGG 0.324345 8_1:+61567871 None:intergenic
GAAAGATCTGCAGGAGTCTT+TGG 0.325327 8_1:-61569871 Msa1205370:CDS
TCATATGGGCCTTCTCATAT+TGG 0.331170 8_1:-61571566 Msa1205370:CDS
TTCAAATCCAGATTTGCTTT+TGG 0.332770 8_1:-61567063 Msa1205370:three_prime_UTR
CATTGTGCCAAAAGCAAATC+TGG 0.346603 8_1:+61567056 None:intergenic
CCTGATGACTTCTGCACAAA+TGG 0.349964 8_1:+61568850 None:intergenic
GCCTTGTGGTTCTAGTGTAT+TGG 0.363904 8_1:-61567717 Msa1205370:CDS
AAAGCGTGGTGCGCTTTATA+CGG 0.364587 8_1:-61573494 Msa1205370:five_prime_UTR
CCAGCATATTGATGCTCTTA+AGG 0.365197 8_1:-61569283 Msa1205370:CDS
TCTGTGCAGATTATCTTGAT+TGG 0.365535 8_1:+61567787 None:intergenic
AACAGATCTGGAAGCGGCTT+AGG 0.371963 8_1:-61573193 Msa1205370:CDS
ATCAACATCCACATCTTTGC+AGG 0.372268 8_1:+61568897 None:intergenic
GGAGAAAGCTGCAAAAGAAT+TGG 0.380847 8_1:-61569262 Msa1205370:CDS
CATATTGGAGAGGAAGGAAT+TGG 0.382576 8_1:-61571551 Msa1205370:CDS
AGAATTGGAACAGGTTTCCT+TGG 0.383621 8_1:-61569247 Msa1205370:CDS
ACCTGTTTCCGATTACTGTT+AGG 0.383846 8_1:-61567660 Msa1205370:intron
ACTCCTTCTCAGACGCTTTG+AGG 0.384043 8_1:+61569949 None:intergenic
CTGTGCAGATTATCTTGATT+GGG 0.384123 8_1:+61567788 None:intergenic
GGTACTTCAACAATTACTTT+TGG 0.384732 8_1:+61568622 None:intergenic
TCTGTGACTAAAGATGTTAA+TGG 0.393938 8_1:-61568559 Msa1205370:CDS
TTGTACAGGGACTTTGGATG+TGG 0.394338 8_1:-61567515 Msa1205370:intron
ACTTGGTAATGGACGGCAAA+TGG 0.400926 8_1:-61568662 Msa1205370:CDS
TGTGAATACCTAACAGTAAT+CGG 0.401322 8_1:+61567652 None:intergenic
CTGGCTTTGTACAGGGACTT+TGG 0.403595 8_1:-61567521 Msa1205370:intron
TGAAGCAGAAAAGAAATTTA+CGG 0.407769 8_1:-61571135 Msa1205370:CDS
CTTGGTAATGGACGGCAAAT+GGG 0.407948 8_1:-61568661 Msa1205370:CDS
ATATGATCATCAACATCATA+TGG 0.413448 8_1:-61571581 Msa1205370:CDS
CTCCCACTCAACTTCAAACT+TGG 0.415131 8_1:+61569671 None:intergenic
CAATGCAGGATGTCATTTGT+TGG 0.415155 8_1:-61567315 Msa1205370:intron
CACAAAGTTTAAACTTGAAA+AGG 0.416010 8_1:-61570647 Msa1205370:CDS
GAGGTCATCCAAAGTGAAAC+AGG 0.416294 8_1:-61569798 Msa1205370:CDS
CTGTGACTAAAGATGTTAAT+GGG 0.418605 8_1:-61568558 Msa1205370:CDS
GTGGCTTCTGATACAAATAA+TGG 0.423209 8_1:-61568721 Msa1205370:CDS
GATAGTTAGAGACAACATAT+TGG 0.428980 8_1:-61567131 Msa1205370:three_prime_UTR
GAAAACCAGCCTACAACTAC+TGG 0.430253 8_1:-61570602 Msa1205370:CDS
CGACAAGCTAAGAGAAGAAA+AGG 0.433504 8_1:-61569556 Msa1205370:CDS
CACTTTCCGATGAACAGATC+TGG 0.434257 8_1:-61573205 Msa1205370:CDS
TGCTGATCCACTTGTAGATC+TGG 0.434812 8_1:-61568464 Msa1205370:CDS
GGCCTCCAGTAGTTGTAGGC+TGG 0.436397 8_1:+61570597 None:intergenic
GTGGCGTATCAGGAGAATTT+CGG 0.436754 8_1:+61568767 None:intergenic
ACCTAACAGTAATCGGAAAC+AGG 0.439212 8_1:+61567659 None:intergenic
AAGCGAAACGCGATAAGCTT+AGG 0.439499 8_1:-61573320 Msa1205370:five_prime_UTR
ACCACAAGGCAAAATTTCTT+CGG 0.440283 8_1:+61567730 None:intergenic
AGCTGCAAAAGAATTGGAAC+AGG 0.440708 8_1:-61569256 Msa1205370:CDS
GGGGTTACTTGCTAGTGAAC+GGG 0.444606 8_1:-61569502 Msa1205370:CDS
CGGAGTAATTGACAGAGGTT+TGG 0.444619 8_1:+61573250 None:intergenic
GATGTCATTTGTTGGTGTGT+TGG 0.444798 8_1:-61567307 Msa1205370:three_prime_UTR
AGGTTTCCTTGGAGATGAAA+AGG 0.444918 8_1:-61569236 Msa1205370:CDS
CACCCTTACACAACAAGAAC+AGG 0.444990 8_1:-61570575 Msa1205370:intron
ACCAACAGAAAATATCTTCA+AGG 0.445161 8_1:-61568966 Msa1205370:CDS
TGGAAGCGGCTTAGGGAGGC+TGG 0.445310 8_1:-61573185 Msa1205370:CDS
AATTTGCAATTGCATCGATA+AGG 0.446834 8_1:+61567233 None:intergenic
GCGCTCATTCTTAATAAAAG+TGG 0.447106 8_1:+61569578 None:intergenic
GGGTGGCCTCCAGTAGTTGT+AGG 0.448905 8_1:+61570593 None:intergenic
AAGCTTAGGATAATCGCGTT+TGG 0.451114 8_1:-61573306 Msa1205370:five_prime_UTR
CCATTTGTGCAGAAGTCATC+AGG 0.451956 8_1:-61568850 Msa1205370:CDS
GAACCTGTTCTTGTTGTGTA+AGG 0.453905 8_1:+61570572 None:intergenic
GTCAATTACTCCGAGTTCTA+GGG 0.454173 8_1:-61573240 Msa1205370:CDS
GTTGAAGTACCCTCTCTAGA+TGG 0.457116 8_1:-61568610 Msa1205370:CDS
TGGATGTGGGCATTGGTAGT+TGG 0.457695 8_1:-61567501 Msa1205370:three_prime_UTR
TGAGAAGAGGCGGGAAGAAG+TGG 0.459412 8_1:-61569361 Msa1205370:CDS
CATGAACATGCTGAGTGGTT+TGG 0.461814 8_1:-61569456 Msa1205370:CDS
GAATCTTTGAAGAAGACAAT+AGG 0.462052 8_1:-61571421 Msa1205370:CDS
TGATAACGCAAAGCAGAGAT+TGG 0.462406 8_1:-61569820 Msa1205370:CDS
GAGACGAGCTTGGGAATTGA+AGG 0.462973 8_1:-61570105 Msa1205370:CDS
ATCCCTTTCTGAAAGGCAAA+AGG 0.464632 8_1:-61570785 Msa1205370:CDS
TGTTGATGCTGTACTGGGCT+AGG 0.464808 8_1:-61566867 Msa1205370:three_prime_UTR
CGTTAGCTGAATCAAGAAAA+CGG 0.465398 8_1:-61571447 Msa1205370:CDS
TACTTGGCGTTCTTCTGAAA+AGG 0.469382 8_1:+61568528 None:intergenic
CTAGTGCTGCTCGATTCTCC+TGG 0.471595 8_1:-61568816 Msa1205370:CDS
ACAAGTCGCCTGTTTCACTT+TGG 0.473180 8_1:+61569790 None:intergenic
TCAGAAGGCTATAGCAGATC+GGG 0.474987 8_1:-61570213 Msa1205370:CDS
TTAAAGAACTTGAGGTTCAA+AGG 0.475754 8_1:-61569137 Msa1205370:CDS
TCAGAGATTCAGCAGGTGTC+AGG 0.476485 8_1:-61567920 Msa1205370:CDS
TGCAAATTGCAATTAGGATG+AGG 0.477222 8_1:-61567218 Msa1205370:three_prime_UTR
TCACAAAATCATCAAGTGTT+CGG 0.481290 8_1:+61566992 None:intergenic
TAAAGAACTTGAGGTTCAAA+GGG 0.483210 8_1:-61569136 Msa1205370:CDS
GGAGGTTGATCTTAAACAAC+GGG 0.485407 8_1:-61570084 Msa1205370:CDS
AGAAGTGGAAAGTTATTTGA+AGG 0.485948 8_1:-61569346 Msa1205370:CDS
ACTCTTGAGTAGTAGTTTGT+CGG 0.486424 8_1:+61566825 None:intergenic
TAAACAGTACACCCATGACT+TGG 0.488917 8_1:-61569523 Msa1205370:CDS
GATACAAATAATGGTAGCAA+TGG 0.490045 8_1:-61568712 Msa1205370:CDS
TCGTGTAGTAATGGTTGATA+AGG 0.492161 8_1:-61567861 Msa1205370:CDS
AGCTAACGCAGATTTATTCG+TGG 0.493155 8_1:+61571462 None:intergenic
TAGGTAGTGGCCTGATCTAA+AGG 0.493923 8_1:+61568397 None:intergenic
GAATCTCTGATATATCTGAC+TGG 0.495750 8_1:+61567933 None:intergenic
ACAGATCTGGAAGCGGCTTA+GGG 0.496135 8_1:-61573192 Msa1205370:CDS
CAAGTAGGCAGAGGGAAAAG+AGG 0.497312 8_1:-61568511 Msa1205370:CDS
GGGACTTTGGATGTGGGCAT+TGG 0.497607 8_1:-61567508 Msa1205370:three_prime_UTR
GGAAAATTTCATGAAGAAGA+TGG 0.499212 8_1:-61569481 Msa1205370:CDS
ATATATATTAGGAGTGTGTA+AGG 0.499589 8_1:-61567466 Msa1205370:intron
TTGAGACTAAGAGACGAGCT+TGG 0.500213 8_1:-61570115 Msa1205370:CDS
ATACAAATAATGGTAGCAAT+GGG 0.500523 8_1:-61568711 Msa1205370:CDS
TATTATGTTGATGCTGTACT+GGG 0.500683 8_1:-61566872 Msa1205370:three_prime_UTR
GAATTTGGAGCTATTGGCTG+AGG 0.501774 8_1:-61569718 Msa1205370:CDS
TAAGGTGTATATACAAAAGC+AGG 0.502182 8_1:+61567251 None:intergenic
AATGACAAGCCACTTGGTAA+TGG 0.503548 8_1:-61568673 Msa1205370:CDS
GATGCTGTACTGGGCTAGGT+TGG 0.503566 8_1:-61566863 Msa1205370:three_prime_UTR
TAGCAATGGGCAAAAGCACT+TGG 0.503709 8_1:-61568698 Msa1205370:CDS
TGAGGAATCGATTAAGCATA+AGG 0.503828 8_1:-61573156 Msa1205370:CDS
CGAAGAAGCTCGTGTAGTAA+TGG 0.505439 8_1:-61567870 Msa1205370:CDS
ACAACGGGAGGACCAAATCC+TGG 0.506111 8_1:-61570069 Msa1205370:CDS
TGAGACTAAGAGACGAGCTT+GGG 0.506442 8_1:-61570114 Msa1205370:CDS
GCTACAAATGCAGCGCAAAT+CGG 0.506734 8_1:-61570150 Msa1205370:CDS
GTTAGCTGAATCAAGAAAAC+GGG 0.507240 8_1:-61571446 Msa1205370:CDS
CCTTAAGAGCATCAATATGC+TGG 0.508753 8_1:+61569283 None:intergenic
GAGAATCGAGCAGCACTAGC+AGG 0.513330 8_1:+61568820 None:intergenic
CCTGGAAAGGGAACATGAGT+TGG 0.515780 8_1:-61570051 Msa1205370:CDS
CAGATCTGTTCATCGGAAAG+TGG 0.517049 8_1:+61573206 None:intergenic
GTGACCTAAGAAATCGAGAA+TGG 0.517616 8_1:-61569179 Msa1205370:CDS
AAACAGTACACCCATGACTT+GGG 0.521393 8_1:-61569522 Msa1205370:CDS
GGCCAAGTTTGAAGTTGAGT+GGG 0.523053 8_1:-61569673 Msa1205370:CDS
TAGCAAGTAACCCCAAGTCA+TGG 0.524802 8_1:+61569511 None:intergenic
TGGCGTTCTTCTGAAAAGGC+AGG 0.525277 8_1:+61568532 None:intergenic
TATTGCTAAGCTTGAAGCTG+AGG 0.526817 8_1:-61573111 Msa1205370:intron
TGTACAGGGACTTTGGATGT+GGG 0.531404 8_1:-61567514 Msa1205370:intron
GTGGTTTGGCAAGATGCAGC+AGG 0.532962 8_1:-61569442 Msa1205370:CDS
CAGAATTTATAGAAAATGAA+AGG 0.535054 8_1:-61569611 Msa1205370:CDS
ATCCTCTCTTTGGTTGAGCG+AGG 0.535700 8_1:+61570723 None:intergenic
TAGATCAGGCCACTACCTAC+TGG 0.536314 8_1:-61568393 Msa1205370:intron
CTCAGAAGGCTATAGCAGAT+CGG 0.536943 8_1:-61570214 Msa1205370:CDS
TGGAGAACACAGAAGGAATA+CGG 0.537560 8_1:-61567697 Msa1205370:CDS
AACCTGTTCTTGTTGTGTAA+GGG 0.540669 8_1:+61570573 None:intergenic
TTGAAGACGATCTAATTCCT+GGG 0.540729 8_1:+61570684 None:intergenic
TATGATCATCAACATCATAT+GGG 0.542963 8_1:-61571580 Msa1205370:CDS
AGGCCAAGTTTGAAGTTGAG+TGG 0.544846 8_1:-61569674 Msa1205370:CDS
CCTTCTCATATTGGAGAGGA+AGG 0.544902 8_1:-61571557 Msa1205370:CDS
ATTTATTCGTGGACAAATCA+CGG 0.548177 8_1:+61571473 None:intergenic
GGAGGACCAAATCCTGGAAA+GGG 0.552592 8_1:-61570063 Msa1205370:CDS
TGGGGTTACTTGCTAGTGAA+CGG 0.552616 8_1:-61569503 Msa1205370:CDS
ACAAGCCAAGAAAGATCTGC+AGG 0.553193 8_1:-61569880 Msa1205370:CDS
GCAAATTGCAATTAGGATGA+GGG 0.553275 8_1:-61567217 Msa1205370:three_prime_UTR
TGACCTAAGAAATCGAGAAT+GGG 0.556475 8_1:-61569178 Msa1205370:CDS
GAAGAACGCCAAGTAGGCAG+AGG 0.557769 8_1:-61568520 Msa1205370:CDS
TAAGCATTTCAACAATAGCA+AGG 0.563138 8_1:+61569007 None:intergenic
CTGTTCTTGTTGTGTAAGGG+TGG 0.565824 8_1:+61570576 None:intergenic
ATCGCGTTTGGAGTTTGCGA+TGG 0.566188 8_1:-61573294 Msa1205370:exon
TAATTGTATTAAAGAACTTG+AGG 0.568588 8_1:-61569145 Msa1205370:CDS
GATATAACAGTGTTGCAGAA+AGG 0.568859 8_1:-61571061 Msa1205370:CDS
AGATATATCAGAGATTCAGC+AGG 0.569147 8_1:-61567927 Msa1205370:CDS
GATGTTGATAACATTGGCAA+TGG 0.570955 8_1:-61568883 Msa1205370:CDS
GATAGAATCGAAGGTAGAAA+CGG 0.571351 8_1:+61573437 None:intergenic
AGCAAGTAACCCCAAGTCAT+GGG 0.571896 8_1:+61569512 None:intergenic
CCGATGAACAGATCTGGAAG+CGG 0.573843 8_1:-61573199 Msa1205370:CDS
ATTTATAGAAAATGAAAGGA+AGG 0.573898 8_1:-61569607 Msa1205370:CDS
ATAACCTTATTGAGAAGAGG+CGG 0.574080 8_1:-61569371 Msa1205370:CDS
ACCAAGAGCAGAAGAACGAA+TGG 0.574615 8_1:-61568428 Msa1205370:CDS
TGATAAGTTGAAAGCTGAGA+AGG 0.575127 8_1:-61569694 Msa1205370:CDS
GACAGAGGTTTGGCAGAGCT+AGG 0.577648 8_1:+61573260 None:intergenic
TAAATAACCTTATTGAGAAG+AGG 0.577808 8_1:-61569374 Msa1205370:CDS
TTCCGTACGCATCTCATGCA+AGG 0.577859 8_1:+61571217 None:intergenic
ATGTTGATAACATTGGCAAT+GGG 0.580067 8_1:-61568882 Msa1205370:CDS
TTGGAAAATGACAAGCCACT+TGG 0.581379 8_1:-61568679 Msa1205370:CDS
GGGAGGACCAAATCCTGGAA+AGG 0.583998 8_1:-61570064 Msa1205370:CDS
TAACCTTATTGAGAAGAGGC+GGG 0.584991 8_1:-61569370 Msa1205370:CDS
CAAGATGCAGCAGGAGCGAG+CGG 0.585787 8_1:-61569433 Msa1205370:CDS
TTGGTAATGGACGGCAAATG+GGG 0.588089 8_1:-61568660 Msa1205370:CDS
GCTAGCATTTCCATCTAGAG+AGG 0.589347 8_1:+61568600 None:intergenic
AAGCGCGTGAAGATATCCTC+AGG 0.590354 8_1:-61571022 Msa1205370:CDS
GTTTGTATATTGAAGCCTCA+AGG 0.590746 8_1:-61566804 Msa1205370:three_prime_UTR
AGAGGCAATCCCTTTCTGAA+AGG 0.590940 8_1:-61570792 Msa1205370:CDS
AAATTTGTACCAGTAGGTAG+TGG 0.593396 8_1:+61568384 None:intergenic
AAGATATAATTTGCCGCCTG+AGG 0.593589 8_1:+61571006 None:intergenic
TACGGAATGTGCTGAAACAA+AGG 0.594764 8_1:-61571201 Msa1205370:CDS
CCGCTTCCAGATCTGTTCAT+CGG 0.598029 8_1:+61573199 None:intergenic
ATCAAGATCACTGAGTGAGA+AGG 0.598320 8_1:-61570021 Msa1205370:CDS
GGCCTTGCATGAGATGCGTA+CGG 0.599729 8_1:-61571219 Msa1205370:CDS
CTTGAGTTCCTGCAAAGATG+TGG 0.599792 8_1:-61568905 Msa1205370:CDS
AAGCCTCAAAGCGTCTGAGA+AGG 0.599945 8_1:-61569952 Msa1205370:CDS
CTTCTCAAAACCCTAGAACT+CGG 0.600395 8_1:+61573230 None:intergenic
AATGTAGGATGAAACTCAGA+AGG 0.602666 8_1:-61570228 Msa1205370:intron
CCTTCCTCTCCAATATGAGA+AGG 0.606050 8_1:+61571557 None:intergenic
TAACGCAAAGCAGAGATTGG+AGG 0.607102 8_1:-61569817 Msa1205370:CDS
GAAAGCAACAATCAAAACCA+TGG 0.612375 8_1:+61567083 None:intergenic
GATCTGGAAGCGGCTTAGGG+AGG 0.612382 8_1:-61573189 Msa1205370:CDS
TAGGGAGGCTGGATTTGATG+AGG 0.612435 8_1:-61573174 Msa1205370:CDS
AATCTCTGATATATCTGACT+GGG 0.618522 8_1:+61567934 None:intergenic
AGGAGGTTGATCTTAAACAA+CGG 0.618769 8_1:-61570085 Msa1205370:CDS
AAGAACGCCAAGTAGGCAGA+GGG 0.620212 8_1:-61568519 Msa1205370:CDS
GGCGTGATTGATAGAATCGA+AGG 0.620245 8_1:+61573428 None:intergenic
TTCTGCGCCAGATCTACAAG+TGG 0.621294 8_1:+61568457 None:intergenic
ACAAGCCACTTGGTAATGGA+CGG 0.621530 8_1:-61568669 Msa1205370:CDS
CTAGCATTTCCATCTAGAGA+GGG 0.627557 8_1:+61568601 None:intergenic
ATAAGGAGATGAATCTTGAG+AGG 0.627569 8_1:-61570810 Msa1205370:CDS
AACAGTACACCCATGACTTG+GGG 0.628762 8_1:-61569521 Msa1205370:CDS
ACGAGCTTGGGAATTGAAGG+AGG 0.629550 8_1:-61570102 Msa1205370:CDS
AATAAGTGCTGTGAGTGCGT+TGG 0.630124 8_1:+61573407 None:intergenic
GTATGAACATGTTAAAACCA+TGG 0.630158 8_1:-61571521 Msa1205370:CDS
AGTGTATTGGAGAACACAGA+AGG 0.633214 8_1:-61567704 Msa1205370:CDS
ATTTGCCGTCCATTACCAAG+TGG 0.636716 8_1:+61568664 None:intergenic
GAGCAGTTGACAGTTCCACT+AGG 0.641324 8_1:+61569991 None:intergenic
CATCTTTGCAGGAACTCAAG+CGG 0.649707 8_1:+61568908 None:intergenic
GGCGTCAAAGATGCATGCAT+AGG 0.650637 8_1:-61571400 Msa1205370:CDS
GATGTGGATGTTGATAACAT+TGG 0.656585 8_1:-61568889 Msa1205370:CDS
TGAGAAGGAGAAAGACCTAG+TGG 0.658465 8_1:-61570006 Msa1205370:CDS
TGGGCCTTCTCATATTGGAG+AGG 0.667331 8_1:-61571561 Msa1205370:CDS
AACCAGCCTACAACTACTGG+AGG 0.669577 8_1:-61570599 Msa1205370:CDS
ATCCTCGCTCAACCAAAGAG+AGG 0.673919 8_1:-61570725 Msa1205370:CDS
TAACTCAGATGACTCGACCA+TGG 0.674789 8_1:+61571504 None:intergenic
GGTTGATCTTAAACAACGGG+AGG 0.676677 8_1:-61570081 Msa1205370:CDS
TGAAAAGGCTTCAAACTGAG+CGG 0.688590 8_1:-61569221 Msa1205370:CDS
CATCAGACTCTTACACAAGG+TGG 0.692343 8_1:-61568931 Msa1205370:CDS
GAACTCGGAGTAATTGACAG+AGG 0.692990 8_1:+61573245 None:intergenic
CGCGTGAAGATATCCTCAGG+CGG 0.693321 8_1:-61571019 Msa1205370:CDS
AGCAGAAAAGAAATTTACGG+AGG 0.700844 8_1:-61571132 Msa1205370:CDS
AAGCATCAGACTCTTACACA+AGG 0.711698 8_1:-61568934 Msa1205370:CDS
TCCAATACACTAGAACCACA+AGG 0.737093 8_1:+61567716 None:intergenic
TGGCACATGAACATGCTGAG+TGG 0.773883 8_1:-61569461 Msa1205370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr8_1:61568949-61568968 None:intergenic 0.0%
!! TTATTATGATATTCAATTAA+AGG - chr8_1:61568046-61568065 Msa1205370:intron 10.0%
!! ATATTTAAAAATTCTAAGTT+GGG - chr8_1:61569748-61569767 Msa1205370:CDS 10.0%
!!! TGTTATTATTTTAATTTTGT+TGG - chr8_1:61569985-61570004 Msa1205370:CDS 10.0%
!!! TGTTATTATTTTAATTTTGT+TGG - chr8_1:61569985-61570004 Msa1205370:CDS 10.0%
!!! AAATTTATTTTTGAGAATAT+TGG - chr8_1:61572247-61572266 Msa1205370:intron 10.0%
!! TTAGATATTACATATATATT+AGG - chr8_1:61572820-61572839 Msa1205370:intron 10.0%
!! AATGTAACAAATATTATTGA+TGG - chr8_1:61567381-61567400 Msa1205370:intron 15.0%
!!! TATTGTTTTATAGTTAAGTT+TGG + chr8_1:61568333-61568352 None:intergenic 15.0%
!!! ATAAGAAAAATATATTTTGC+TGG + chr8_1:61568670-61568689 None:intergenic 15.0%
!! ATCAAAATTTATATCATTAC+AGG + chr8_1:61569398-61569417 None:intergenic 15.0%
!! CATATTTAAAAATTCTAAGT+TGG - chr8_1:61569747-61569766 Msa1205370:CDS 15.0%
!! TTAAAATAATAACAATACAG+AGG + chr8_1:61569979-61569998 None:intergenic 15.0%
!!! ATTATTTTAATTTTGTTGGA+TGG - chr8_1:61569989-61570008 Msa1205370:CDS 15.0%
!! TTAAAATAATAACAATACAG+AGG + chr8_1:61569979-61569998 None:intergenic 15.0%
!!! ATTATTTTAATTTTGTTGGA+TGG - chr8_1:61569989-61570008 Msa1205370:CDS 15.0%
!! CTTATGAATAATATATTACT+CGG + chr8_1:61572281-61572300 None:intergenic 15.0%
!! GATAAAGTTATAGAAATTTA+CGG + chr8_1:61572888-61572907 None:intergenic 15.0%
!!! AATATTATTGATGGCTTATA+TGG - chr8_1:61567390-61567409 Msa1205370:intron 20.0%
!! TTAAGAAAAATCTAGAGATA+CGG - chr8_1:61567618-61567637 Msa1205370:intron 20.0%
!! ATCAAATTTACACTTTAAAC+TGG - chr8_1:61567907-61567926 Msa1205370:CDS 20.0%
!!! TTTATTGATATTAGGGTTTT+GGG - chr8_1:61567968-61567987 Msa1205370:intron 20.0%
!! ATTGAATATCATAATAAGCA+TGG + chr8_1:61568043-61568062 None:intergenic 20.0%
!! ATTAACCTGTTAATGTTAAT+TGG - chr8_1:61568176-61568195 Msa1205370:intron 20.0%
!! ATTAACCAATTAACATTAAC+AGG + chr8_1:61568184-61568203 None:intergenic 20.0%
!! CATATTTAAGCAATTCAAAT+TGG - chr8_1:61568219-61568238 Msa1205370:intron 20.0%
!! GTGTGTATTATAGTTAAATT+TGG - chr8_1:61568289-61568308 Msa1205370:intron 20.0%
!! GAAAGAAAGAAAGAAAAAAT+TGG + chr8_1:61569014-61569033 None:intergenic 20.0%
!! AAAATTTATATCATTACAGG+TGG + chr8_1:61569395-61569414 None:intergenic 20.0%
!!! AATTTTTGAAGTGAAACTAA+AGG - chr8_1:61570531-61570550 Msa1205370:intron 20.0%
!! CAGAATTTATAGAAAATGAA+AGG - chr8_1:61570686-61570705 Msa1205370:CDS 20.0%
!! ATTTATAGAAAATGAAAGGA+AGG - chr8_1:61570690-61570709 Msa1205370:CDS 20.0%
!! TAATTGTATTAAAGAACTTG+AGG - chr8_1:61571152-61571171 Msa1205370:CDS 20.0%
!!! GTTAGCATATTTTTTTTACA+AGG - chr8_1:61571958-61571977 Msa1205370:intron 20.0%
!! TTAAAAAGTCATACAAATGA+TGG - chr8_1:61572078-61572097 Msa1205370:intron 20.0%
!! AATAAATTTGTAGATCTTTG+AGG + chr8_1:61572236-61572255 None:intergenic 20.0%
!! ATATTATTCATAAGTAGTCT+AGG - chr8_1:61572287-61572306 Msa1205370:intron 20.0%
!!! TTTATTGTAACTTCTTTTCT+AGG - chr8_1:61572684-61572703 Msa1205370:intron 20.0%
!! TTATCGAAGTAAAATTGATT+GGG + chr8_1:61572912-61572931 None:intergenic 20.0%
!! ATTATCGAAGTAAAATTGAT+TGG + chr8_1:61572913-61572932 None:intergenic 20.0%
!! GTTATTTGTGTATAGATAAT+TGG - chr8_1:61573018-61573037 Msa1205370:intron 20.0%
!!! TGAAATTTTAATCAGCTTCT+TGG + chr8_1:61566956-61566975 None:intergenic 25.0%
!!! AGTTTGAGTTGATTGAATTA+GGG - chr8_1:61567249-61567268 Msa1205370:three_prime_UTR 25.0%
!! TTTTACTTTGACATTGTTTG+TGG - chr8_1:61567293-61567312 Msa1205370:three_prime_UTR 25.0%
!! ATGGATTATTTGTGATGATT+CGG - chr8_1:61567409-61567428 Msa1205370:intron 25.0%
!! AGTTTCTCTTATAGTTTTCT+AGG + chr8_1:61567597-61567616 None:intergenic 25.0%
! TGTAAAAATGATAGATCATG+TGG - chr8_1:61567736-61567755 Msa1205370:CDS 25.0%
!!! TGAAACTTTAGAGTATTGAT+AGG - chr8_1:61567839-61567858 Msa1205370:CDS 25.0%
! GTATTCTATAAAAGGACAAA+TGG + chr8_1:61567882-61567901 None:intergenic 25.0%
!! TGTCCTTTTATAGAATACTT+TGG - chr8_1:61567884-61567903 Msa1205370:CDS 25.0%
!! GATCCAAAGTATTCTATAAA+AGG + chr8_1:61567890-61567909 None:intergenic 25.0%
! AGGTGAACTTTATTGATATT+AGG - chr8_1:61567960-61567979 Msa1205370:intron 25.0%
! GGTGAACTTTATTGATATTA+GGG - chr8_1:61567961-61567980 Msa1205370:intron 25.0%
!! CTTTATTGATATTAGGGTTT+TGG - chr8_1:61567967-61567986 Msa1205370:intron 25.0%
! TTAACTATAATACACACACA+TGG + chr8_1:61568286-61568305 None:intergenic 25.0%
! ATTTGAATCAAGAAGAGAAT+TGG + chr8_1:61568367-61568386 None:intergenic 25.0%
!!! GGTTATTTTTACAATACATG+TGG + chr8_1:61568458-61568477 None:intergenic 25.0%
! ACTTGAAAAGACAATTTGAT+TGG + chr8_1:61568577-61568596 None:intergenic 25.0%
! ATATGATCATCAACATCATA+TGG - chr8_1:61568716-61568735 Msa1205370:CDS 25.0%
! TATGATCATCAACATCATAT+GGG - chr8_1:61568717-61568736 Msa1205370:CDS 25.0%
! TGAAGCAGAAAAGAAATTTA+CGG - chr8_1:61569162-61569181 Msa1205370:CDS 25.0%
! CACAAAGTTTAAACTTGAAA+AGG - chr8_1:61569650-61569669 Msa1205370:CDS 25.0%
! ATGAAAAAAAAGAAGAGTTG+CGG - chr8_1:61570656-61570675 Msa1205370:CDS 25.0%
! TAAATAACCTTATTGAGAAG+AGG - chr8_1:61570923-61570942 Msa1205370:intron 25.0%
! TGAAATGCTTAAATCTGATA+TGG - chr8_1:61571302-61571321 Msa1205370:intron 25.0%
! ATACAAATAATGGTAGCAAT+GGG - chr8_1:61571586-61571605 Msa1205370:CDS 25.0%
! GTGCTTCAAATCATAAAAAA+GGG - chr8_1:61572399-61572418 Msa1205370:intron 25.0%
!! ATATATATTAGGAGTGTGTA+AGG - chr8_1:61572831-61572850 Msa1205370:intron 25.0%
! TATCGAAGTAAAATTGATTG+GGG + chr8_1:61572911-61572930 None:intergenic 25.0%
!!! TTTTATGAGTACTTTTTCCA+TGG - chr8_1:61573197-61573216 Msa1205370:CDS 25.0%
!!! GTGTTTGATTTGATTGTTTT+TGG - chr8_1:61573340-61573359 Msa1205370:five_prime_UTR 25.0%
! TTGTGTTCTTTTTGCTTTAG+GGG + chr8_1:61566916-61566935 None:intergenic 30.0%
! GTTGTGTTCTTTTTGCTTTA+GGG + chr8_1:61566917-61566936 None:intergenic 30.0%
! TGTTGTGTTCTTTTTGCTTT+AGG + chr8_1:61566918-61566937 None:intergenic 30.0%
!! GAGTTTGAGTTGATTGAATT+AGG - chr8_1:61567248-61567267 Msa1205370:three_prime_UTR 30.0%
!! GTTTGAGTTGATTGAATTAG+GGG - chr8_1:61567250-61567269 Msa1205370:three_prime_UTR 30.0%
GATTGAATTAGGGGATTAAT+AGG - chr8_1:61567259-61567278 Msa1205370:three_prime_UTR 30.0%
GACTTGTAGATTCTCTATAA+AGG - chr8_1:61567522-61567541 Msa1205370:intron 30.0%
AAGGAGAGTAGATTACATAA+AGG - chr8_1:61567541-61567560 Msa1205370:intron 30.0%
! TAAAGGTTAGTCAAATCACT+AGG - chr8_1:61567558-61567577 Msa1205370:intron 30.0%
! AAAGGTTAGTCAAATCACTA+GGG - chr8_1:61567559-61567578 Msa1205370:intron 30.0%
CTATCTATGACTAACCTATA+AGG + chr8_1:61567768-61567787 None:intergenic 30.0%
TTTACACTTTAAACTGGTAG+TGG - chr8_1:61567913-61567932 Msa1205370:CDS 30.0%
ATATCATAATAAGCATGGAC+CGG + chr8_1:61568038-61568057 None:intergenic 30.0%
AAGGAAACTTGCAAAATTCT+TGG + chr8_1:61568117-61568136 None:intergenic 30.0%
ATTTGCAAAGTCAATTGAGT+TGG - chr8_1:61568503-61568522 Msa1205370:CDS 30.0%
AATTTGATTGGTGAAGGAAA+AGG + chr8_1:61568565-61568584 None:intergenic 30.0%
AAAGACAATTTGATTGGTGA+AGG + chr8_1:61568571-61568590 None:intergenic 30.0%
!! GGTTTTAACATGTTCATACT+TGG + chr8_1:61568775-61568794 None:intergenic 30.0%
GTATGAACATGTTAAAACCA+TGG - chr8_1:61568776-61568795 Msa1205370:CDS 30.0%
ATTTATTCGTGGACAAATCA+CGG + chr8_1:61568827-61568846 None:intergenic 30.0%
! GAATCTTTGAAGAAGACAAT+AGG - chr8_1:61568876-61568895 Msa1205370:CDS 30.0%
! AAAGGTTTTACAACAAGAAC+AGG - chr8_1:61569530-61569549 Msa1205370:CDS 30.0%
! TTTTACAACAAGAACAGGAA+AGG - chr8_1:61569535-61569554 Msa1205370:CDS 30.0%
TAAAAAGATGATCCTCTCTT+TGG + chr8_1:61569587-61569606 None:intergenic 30.0%
ATAAAAGAACCATTGACCAT+AGG + chr8_1:61569943-61569962 None:intergenic 30.0%
! TTTTGTTGGATGGAAAATGT+AGG - chr8_1:61570054-61570073 Msa1205370:CDS 30.0%
!!! ATGTTTTTTTGCTCTCATTG+TGG + chr8_1:61570113-61570132 None:intergenic 30.0%
! ATCTTTCTCCTTTTGCAAAA+GGG + chr8_1:61570389-61570408 None:intergenic 30.0%
TCTTGTAAGATCTCAGAATT+TGG - chr8_1:61570564-61570583 Msa1205370:intron 30.0%
GGAAAATTTCATGAAGAAGA+TGG - chr8_1:61570816-61570835 Msa1205370:CDS 30.0%
GGATATTGAGATGCAAAAAA+GGG - chr8_1:61570897-61570916 Msa1205370:intron 30.0%
AGAAGTGGAAAGTTATTTGA+AGG - chr8_1:61570951-61570970 Msa1205370:intron 30.0%
!! TTTTGAGGAAGAGAAGAATA+GGG - chr8_1:61570987-61571006 Msa1205370:intron 30.0%
TTAAAGAACTTGAGGTTCAA+AGG - chr8_1:61571160-61571179 Msa1205370:CDS 30.0%
TAAAGAACTTGAGGTTCAAA+GGG - chr8_1:61571161-61571180 Msa1205370:CDS 30.0%
GACTGAAGAATTGAAGAAAT+TGG - chr8_1:61571242-61571261 Msa1205370:intron 30.0%
TAAGCATTTCAACAATAGCA+AGG + chr8_1:61571293-61571312 None:intergenic 30.0%
ACCAACAGAAAATATCTTCA+AGG - chr8_1:61571331-61571350 Msa1205370:intron 30.0%
! TCCTTGAAGATATTTTCTGT+TGG + chr8_1:61571335-61571354 None:intergenic 30.0%
!! ATGTTGATAACATTGGCAAT+GGG - chr8_1:61571415-61571434 Msa1205370:CDS 30.0%
!!! AAATTTCCTTTTTTCGTGAG+TGG + chr8_1:61571552-61571571 None:intergenic 30.0%
ACTCACGAAAAAAGGAAATT+TGG - chr8_1:61571551-61571570 Msa1205370:CDS 30.0%
GATACAAATAATGGTAGCAA+TGG - chr8_1:61571585-61571604 Msa1205370:CDS 30.0%
! GGTACTTCAACAATTACTTT+TGG + chr8_1:61571678-61571697 None:intergenic 30.0%
TCTGTGACTAAAGATGTTAA+TGG - chr8_1:61571738-61571757 Msa1205370:intron 30.0%
CTGTGACTAAAGATGTTAAT+GGG - chr8_1:61571739-61571758 Msa1205370:intron 30.0%
ACAAATAGTGTGTTTCAGTA+GGG + chr8_1:61571940-61571959 None:intergenic 30.0%
AACAAATAGTGTGTTTCAGT+AGG + chr8_1:61571941-61571960 None:intergenic 30.0%
!! TACAAATGATGGATTGTGAT+TGG - chr8_1:61572089-61572108 Msa1205370:intron 30.0%
AATCTCTGATATATCTGACT+GGG + chr8_1:61572366-61572385 None:intergenic 30.0%
GGTGCTTCAAATCATAAAAA+AGG - chr8_1:61572398-61572417 Msa1205370:intron 30.0%
TGTGAATACCTAACAGTAAT+CGG + chr8_1:61572648-61572667 None:intergenic 30.0%
ATCGAAGTAAAATTGATTGG+GGG + chr8_1:61572910-61572929 None:intergenic 30.0%
TAAGGTGTATATACAAAAGC+AGG + chr8_1:61573049-61573068 None:intergenic 30.0%
! AATTTGCAATTGCATCGATA+AGG + chr8_1:61573067-61573086 None:intergenic 30.0%
TGCAATTGCAAATTGCAATT+AGG - chr8_1:61573073-61573092 Msa1205370:intron 30.0%
GATAGTTAGAGACAACATAT+TGG - chr8_1:61573166-61573185 Msa1205370:CDS 30.0%
!! TTCAAATCCAGATTTGCTTT+TGG - chr8_1:61573234-61573253 Msa1205370:CDS 30.0%
TCACAAAATCATCAAGTGTT+CGG + chr8_1:61573308-61573327 None:intergenic 30.0%
!! AGCTCTTGTTTATATTTTGC+TGG - chr8_1:61573385-61573404 Msa1205370:five_prime_UTR 30.0%
TATTATGTTGATGCTGTACT+GGG - chr8_1:61573425-61573444 Msa1205370:five_prime_UTR 30.0%
GTGAGTAATCAAAAAAAGCG+TGG - chr8_1:61566831-61566850 Msa1205370:three_prime_UTR 35.0%
GATAGAATCGAAGGTAGAAA+CGG + chr8_1:61566863-61566882 None:intergenic 35.0%
TGAGGAATCGATTAAGCATA+AGG - chr8_1:61567141-61567160 Msa1205370:three_prime_UTR 35.0%
!! GGGGATTAATAGGTTTTATC+AGG - chr8_1:61567269-61567288 Msa1205370:three_prime_UTR 35.0%
ACTTTGACATTGTTTGTGGT+TGG - chr8_1:61567297-61567316 Msa1205370:three_prime_UTR 35.0%
! GATTATTTGTGATGATTCGG+TGG - chr8_1:61567412-61567431 Msa1205370:intron 35.0%
ATACGGTACATTTGTAAGAG+TGG - chr8_1:61567435-61567454 Msa1205370:intron 35.0%
! AAGGTTAGTCAAATCACTAG+GGG - chr8_1:61567560-61567579 Msa1205370:intron 35.0%
TATAAAAGGACAAATGGCTG+CGG + chr8_1:61567876-61567895 None:intergenic 35.0%
TTGAAGCTATCACATTGAGT+AGG - chr8_1:61567995-61568014 Msa1205370:intron 35.0%
GAAGGATATATGCAATGAGA+GGG + chr8_1:61568264-61568283 None:intergenic 35.0%
CTATAATACACACACATGGA+AGG + chr8_1:61568282-61568301 None:intergenic 35.0%
ACAGTGACCATTCATGTTAT+TGG - chr8_1:61568642-61568661 Msa1205370:CDS 35.0%
CGTTAGCTGAATCAAGAAAA+CGG - chr8_1:61568850-61568869 Msa1205370:CDS 35.0%
GTTAGCTGAATCAAGAAAAC+GGG - chr8_1:61568851-61568870 Msa1205370:CDS 35.0%
!!! TTGCTTTTTGAAGCTTGAGA+AGG - chr8_1:61569057-61569076 Msa1205370:CDS 35.0%
AGCAGAAAAGAAATTTACGG+AGG - chr8_1:61569165-61569184 Msa1205370:CDS 35.0%
GATATAACAGTGTTGCAGAA+AGG - chr8_1:61569236-61569255 Msa1205370:CDS 35.0%
CAGCTGTGATGAAAAAGATA+AGG - chr8_1:61569470-61569489 Msa1205370:CDS 35.0%
ATAAGGAGATGAATCTTGAG+AGG - chr8_1:61569487-61569506 Msa1205370:CDS 35.0%
! AACCTTTTGCCTTTCAGAAA+GGG + chr8_1:61569517-61569536 None:intergenic 35.0%
! AAACCTTTTGCCTTTCAGAA+AGG + chr8_1:61569518-61569537 None:intergenic 35.0%
!! TCATCTTTTTAGTAGATCCC+AGG - chr8_1:61569596-61569615 Msa1205370:CDS 35.0%
TTGAAGACGATCTAATTCCT+GGG + chr8_1:61569616-61569635 None:intergenic 35.0%
TTTGAAGACGATCTAATTCC+TGG + chr8_1:61569617-61569636 None:intergenic 35.0%
AGATCGTCTTCAAAAAGAGT+TGG - chr8_1:61569623-61569642 Msa1205370:CDS 35.0%
! AACCTGTTCTTGTTGTGTAA+GGG + chr8_1:61569727-61569746 None:intergenic 35.0%
TTATCACAACACATATCCAC+GGG + chr8_1:61569821-61569840 None:intergenic 35.0%
GTTATCACAACACATATCCA+CGG + chr8_1:61569822-61569841 None:intergenic 35.0%
TGGATATGTGTTGTGATAAC+AGG - chr8_1:61569822-61569841 Msa1205370:CDS 35.0%
ATCTGTATGTTCTCTTCCTA+TGG - chr8_1:61569924-61569943 Msa1205370:CDS 35.0%
AATGTAGGATGAAACTCAGA+AGG - chr8_1:61570069-61570088 Msa1205370:CDS 35.0%
! AGGAGGTTGATCTTAAACAA+CGG - chr8_1:61570212-61570231 Msa1205370:CDS 35.0%
! AAACACAACCCTTTTGCAAA+AGG - chr8_1:61570378-61570397 Msa1205370:intron 35.0%
! CATCTTTCTCCTTTTGCAAA+AGG + chr8_1:61570390-61570409 None:intergenic 35.0%
! ATCTCAGAATTTGGAGCTAT+TGG - chr8_1:61570573-61570592 Msa1205370:intron 35.0%
! TGATAAGTTGAAAGCTGAGA+AGG - chr8_1:61570603-61570622 Msa1205370:CDS 35.0%
GCGCTCATTCTTAATAAAAG+TGG + chr8_1:61570722-61570741 None:intergenic 35.0%
GGGATATTGAGATGCAAAAA+AGG - chr8_1:61570896-61570915 Msa1205370:intron 35.0%
ATAACCTTATTGAGAAGAGG+CGG - chr8_1:61570926-61570945 Msa1205370:intron 35.0%
!! CTTTTGAGGAAGAGAAGAAT+AGG - chr8_1:61570986-61571005 Msa1205370:intron 35.0%
TGACCTAAGAAATCGAGAAT+GGG - chr8_1:61571119-61571138 Msa1205370:CDS 35.0%
!! GATGTGGATGTTGATAACAT+TGG - chr8_1:61571408-61571427 Msa1205370:CDS 35.0%
!! GATGTTGATAACATTGGCAA+TGG - chr8_1:61571414-61571433 Msa1205370:CDS 35.0%
GAAAAAAGGAAATTTGGCTG+TGG - chr8_1:61571557-61571576 Msa1205370:CDS 35.0%
GTGGCTTCTGATACAAATAA+TGG - chr8_1:61571576-61571595 Msa1205370:CDS 35.0%
AAATTTGTACCAGTAGGTAG+TGG + chr8_1:61571916-61571935 None:intergenic 35.0%
TAAGTAGTCTAGGTGTAGTA+TGG - chr8_1:61572297-61572316 Msa1205370:intron 35.0%
GAATCTCTGATATATCTGAC+TGG + chr8_1:61572367-61572386 None:intergenic 35.0%
AGATATATCAGAGATTCAGC+AGG - chr8_1:61572370-61572389 Msa1205370:intron 35.0%
! TCGTGTAGTAATGGTTGATA+AGG - chr8_1:61572436-61572455 Msa1205370:intron 35.0%
CTGTGCAGATTATCTTGATT+GGG + chr8_1:61572512-61572531 None:intergenic 35.0%
TCTGTGCAGATTATCTTGAT+TGG + chr8_1:61572513-61572532 None:intergenic 35.0%
ACCACAAGGCAAAATTTCTT+CGG + chr8_1:61572570-61572589 None:intergenic 35.0%
! TGTAACTTCTTTTCTAGGCT+AGG - chr8_1:61572689-61572708 Msa1205370:intron 35.0%
TGCAAATTGCAATTAGGATG+AGG - chr8_1:61573079-61573098 Msa1205370:intron 35.0%
GCAAATTGCAATTAGGATGA+GGG - chr8_1:61573080-61573099 Msa1205370:intron 35.0%
GAAAGCAACAATCAAAACCA+TGG + chr8_1:61573217-61573236 None:intergenic 35.0%
GTATTATGTTGATGCTGTAC+TGG - chr8_1:61573424-61573443 Msa1205370:five_prime_UTR 35.0%
! ACTCTTGAGTAGTAGTTTGT+CGG + chr8_1:61573475-61573494 None:intergenic 35.0%
GTTTGTATATTGAAGCCTCA+AGG - chr8_1:61573493-61573512 Msa1205370:five_prime_UTR 35.0%
AAGCTTAGGATAATCGCGTT+TGG - chr8_1:61566991-61567010 Msa1205370:three_prime_UTR 40.0%
TGTCAATTACTCCGAGTTCT+AGG - chr8_1:61567056-61567075 Msa1205370:three_prime_UTR 40.0%
GTCAATTACTCCGAGTTCTA+GGG - chr8_1:61567057-61567076 Msa1205370:three_prime_UTR 40.0%
CTTCTCAAAACCCTAGAACT+CGG + chr8_1:61567070-61567089 None:intergenic 40.0%
TATTGCTAAGCTTGAAGCTG+AGG - chr8_1:61567186-61567205 Msa1205370:three_prime_UTR 40.0%
!! TTGTGATGATTCGGTGGATA+CGG - chr8_1:61567418-61567437 Msa1205370:intron 40.0%
! TGTAAGAGTGGTGATGTTGT+TGG - chr8_1:61567447-61567466 Msa1205370:intron 40.0%
! GTAAGAGTGGTGATGTTGTT+GGG - chr8_1:61567448-61567467 Msa1205370:intron 40.0%
! AGGTTAGTCAAATCACTAGG+GGG - chr8_1:61567561-61567580 Msa1205370:intron 40.0%
AAAATCTAGAGATACGGAGC+TGG - chr8_1:61567624-61567643 Msa1205370:intron 40.0%
! TTGTAGTGGAATGCAGCTAT+AGG - chr8_1:61567940-61567959 Msa1205370:CDS 40.0%
GGACTTTACCTAATCAGTTC+CGG - chr8_1:61568016-61568035 Msa1205370:intron 40.0%
TGATCATTGCGCAAATGACA+AGG + chr8_1:61568136-61568155 None:intergenic 40.0%
GGAAGGATATATGCAATGAG+AGG + chr8_1:61568265-61568284 None:intergenic 40.0%
TGAACTGACCATGAAAGCTA+AGG + chr8_1:61568484-61568503 None:intergenic 40.0%
TCATATGGGCCTTCTCATAT+TGG - chr8_1:61568731-61568750 Msa1205370:CDS 40.0%
CATATTGGAGAGGAAGGAAT+TGG - chr8_1:61568746-61568765 Msa1205370:CDS 40.0%
AGCTAACGCAGATTTATTCG+TGG + chr8_1:61568838-61568857 None:intergenic 40.0%
TACGGAATGTGCTGAAACAA+AGG - chr8_1:61569096-61569115 Msa1205370:CDS 40.0%
! AAGATATAATTTGCCGCCTG+AGG + chr8_1:61569294-61569313 None:intergenic 40.0%
! ATCCCTTTCTGAAAGGCAAA+AGG - chr8_1:61569512-61569531 Msa1205370:CDS 40.0%
TCGTCTTCAAAAAGAGTTGG+AGG - chr8_1:61569626-61569645 Msa1205370:CDS 40.0%
! GAACCTGTTCTTGTTGTGTA+AGG + chr8_1:61569728-61569747 None:intergenic 40.0%
GATAACAGGCACTCACTAAA+TGG - chr8_1:61569836-61569855 Msa1205370:CDS 40.0%
TGTTCTCTTCCTATGGTCAA+TGG - chr8_1:61569931-61569950 Msa1205370:CDS 40.0%
! GGAGGTTGATCTTAAACAAC+GGG - chr8_1:61570213-61570232 Msa1205370:CDS 40.0%
ATCAAGATCACTGAGTGAGA+AGG - chr8_1:61570276-61570295 Msa1205370:intron 40.0%
! TGATAACGCAAAGCAGAGAT+TGG - chr8_1:61570477-61570496 Msa1205370:intron 40.0%
CGACAAGCTAAGAGAAGAAA+AGG - chr8_1:61570741-61570760 Msa1205370:CDS 40.0%
TAACCTTATTGAGAAGAGGC+GGG - chr8_1:61570927-61570946 Msa1205370:intron 40.0%
! GGAAAGAGAAACAGCTTTTG+AGG - chr8_1:61570972-61570991 Msa1205370:intron 40.0%
!! CCTTAAGAGCATCAATATGC+TGG + chr8_1:61571017-61571036 None:intergenic 40.0%
CCAGCATATTGATGCTCTTA+AGG - chr8_1:61571014-61571033 Msa1205370:CDS 40.0%
GGAGAAAGCTGCAAAAGAAT+TGG - chr8_1:61571035-61571054 Msa1205370:CDS 40.0%
AGCTGCAAAAGAATTGGAAC+AGG - chr8_1:61571041-61571060 Msa1205370:CDS 40.0%
AGAATTGGAACAGGTTTCCT+TGG - chr8_1:61571050-61571069 Msa1205370:CDS 40.0%
AGGTTTCCTTGGAGATGAAA+AGG - chr8_1:61571061-61571080 Msa1205370:CDS 40.0%
! TTGAAGCCTTTTCATCTCCA+AGG + chr8_1:61571070-61571089 None:intergenic 40.0%
TGAAAAGGCTTCAAACTGAG+CGG - chr8_1:61571076-61571095 Msa1205370:CDS 40.0%
!! TGAGCGGACTGAGATAAATT+TGG - chr8_1:61571092-61571111 Msa1205370:CDS 40.0%
GTGACCTAAGAAATCGAGAA+TGG - chr8_1:61571118-61571137 Msa1205370:CDS 40.0%
AAGCATCAGACTCTTACACA+AGG - chr8_1:61571363-61571382 Msa1205370:intron 40.0%
ATCAACATCCACATCTTTGC+AGG + chr8_1:61571403-61571422 None:intergenic 40.0%
TTGGAAAATGACAAGCCACT+TGG - chr8_1:61571618-61571637 Msa1205370:intron 40.0%
AATGACAAGCCACTTGGTAA+TGG - chr8_1:61571624-61571643 Msa1205370:intron 40.0%
CTAGCATTTCCATCTAGAGA+GGG + chr8_1:61571699-61571718 None:intergenic 40.0%
! TACTTGGCGTTCTTCTGAAA+AGG + chr8_1:61571772-61571791 None:intergenic 40.0%
! TTTTCAGAAGAACGCCAAGT+AGG - chr8_1:61571771-61571790 Msa1205370:intron 40.0%
GGCCAAAAATCCTTTAGATC+AGG - chr8_1:61571890-61571909 Msa1205370:intron 40.0%
! GGCCTGATCTAAAGGATTTT+TGG + chr8_1:61571895-61571914 None:intergenic 40.0%
TAGGGCAAATTTGTACCAGT+AGG + chr8_1:61571922-61571941 None:intergenic 40.0%
! TAAGCCAATGAAAGCACAAG+TGG - chr8_1:61572198-61572217 Msa1205370:intron 40.0%
CATTACTACACGAGCTTCTT+CGG + chr8_1:61572429-61572448 None:intergenic 40.0%
! TCCGAAGAAATTTTGCCTTG+TGG - chr8_1:61572566-61572585 Msa1205370:intron 40.0%
TCCAATACACTAGAACCACA+AGG + chr8_1:61572584-61572603 None:intergenic 40.0%
AGTGTATTGGAGAACACAGA+AGG - chr8_1:61572593-61572612 Msa1205370:intron 40.0%
TGGAGAACACAGAAGGAATA+CGG - chr8_1:61572600-61572619 Msa1205370:intron 40.0%
ACCTGTTTCCGATTACTGTT+AGG - chr8_1:61572637-61572656 Msa1205370:intron 40.0%
ACCTAACAGTAATCGGAAAC+AGG + chr8_1:61572641-61572660 None:intergenic 40.0%
AGCCAGCATTAAGTTATGAG+CGG + chr8_1:61572762-61572781 None:intergenic 40.0%
!! ACTTAATGCTGGCTTTGTAC+AGG - chr8_1:61572768-61572787 Msa1205370:intron 40.0%
!! CTTAATGCTGGCTTTGTACA+GGG - chr8_1:61572769-61572788 Msa1205370:intron 40.0%
! GTGTTCTTTTCTTGCAATGC+AGG - chr8_1:61572968-61572987 Msa1205370:intron 40.0%
! CAATGCAGGATGTCATTTGT+TGG - chr8_1:61572982-61573001 Msa1205370:intron 40.0%
! GATGTCATTTGTTGGTGTGT+TGG - chr8_1:61572990-61573009 Msa1205370:intron 40.0%
CATTGTGCCAAAAGCAAATC+TGG + chr8_1:61573244-61573263 None:intergenic 40.0%
!! ATTTGCTTTTGGCACAATGC+TGG - chr8_1:61573245-61573264 Msa1205370:CDS 40.0%
!! TTTGCTTTTGGCACAATGCT+GGG - chr8_1:61573246-61573265 Msa1205370:CDS 40.0%
AAAGCGTGGTGCGCTTTATA+CGG - chr8_1:61566803-61566822 Msa1205370:three_prime_UTR 45.0%
GGCGTGATTGATAGAATCGA+AGG + chr8_1:61566872-61566891 None:intergenic 45.0%
! AATAAGTGCTGTGAGTGCGT+TGG + chr8_1:61566893-61566912 None:intergenic 45.0%
AAGCGAAACGCGATAAGCTT+AGG - chr8_1:61566977-61566996 Msa1205370:three_prime_UTR 45.0%
CGGAGTAATTGACAGAGGTT+TGG + chr8_1:61567050-61567069 None:intergenic 45.0%
GAACTCGGAGTAATTGACAG+AGG + chr8_1:61567055-61567074 None:intergenic 45.0%
CAGATCTGTTCATCGGAAAG+TGG + chr8_1:61567094-61567113 None:intergenic 45.0%
CACTTTCCGATGAACAGATC+TGG - chr8_1:61567092-61567111 Msa1205370:three_prime_UTR 45.0%
ATGTTGTTGGGCCGTAAAGA+TGG - chr8_1:61567460-61567479 Msa1205370:intron 45.0%
!! GAACTCGGCATTGGTTGTTT+GGG - chr8_1:61567486-61567505 Msa1205370:three_prime_UTR 45.0%
ACTTAGTGAGGTCGGCTAAA+TGG + chr8_1:61567686-61567705 None:intergenic 45.0%
ATTTAGCCGACCTCACTAAG+TGG - chr8_1:61567685-61567704 Msa1205370:CDS 45.0%
TTTAGCCGACCTCACTAAGT+GGG - chr8_1:61567686-61567705 Msa1205370:CDS 45.0%
AAGTCTTACCCCACTTAGTG+AGG + chr8_1:61567698-61567717 None:intergenic 45.0%
CACTAAGTGGGGTAAGACTT+AGG - chr8_1:61567698-61567717 Msa1205370:CDS 45.0%
TCATGTGGCGTGTTCCTTAT+AGG - chr8_1:61567751-61567770 Msa1205370:CDS 45.0%
!! AGAGTATTGATAGGTGCCTG+TGG - chr8_1:61567848-61567867 Msa1205370:CDS 45.0%
!! CTGGTAGTGGTTGATTGTAG+TGG - chr8_1:61567926-61567945 Msa1205370:CDS 45.0%
! GCACAGTGATTCGTGTTGAT+CGG - chr8_1:61568404-61568423 Msa1205370:CDS 45.0%
! TAACCACGCCTTAGCTTTCA+TGG - chr8_1:61568473-61568492 Msa1205370:CDS 45.0%
GCTGGCACCAATAACATGAA+TGG + chr8_1:61568652-61568671 None:intergenic 45.0%
CCTTCCTCTCCAATATGAGA+AGG + chr8_1:61568743-61568762 None:intergenic 45.0%
CCTTCTCATATTGGAGAGGA+AGG - chr8_1:61568740-61568759 Msa1205370:CDS 45.0%
TAACTCAGATGACTCGACCA+TGG + chr8_1:61568796-61568815 None:intergenic 45.0%
TAAAGATCACTCGCTTGCTC+AGG + chr8_1:61569371-61569390 None:intergenic 45.0%
TTCATCACAGCTGTGAGAGA+CGG + chr8_1:61569463-61569482 None:intergenic 45.0%
AGAGGCAATCCCTTTCTGAA+AGG - chr8_1:61569505-61569524 Msa1205370:CDS 45.0%
!!! GCTGGTTTTCTTGTCATGGA+GGG + chr8_1:61569685-61569704 None:intergenic 45.0%
!!! GTAGGCTGGTTTTCTTGTCA+TGG + chr8_1:61569689-61569708 None:intergenic 45.0%
GAAAACCAGCCTACAACTAC+TGG - chr8_1:61569695-61569714 Msa1205370:CDS 45.0%
! CTGTTCTTGTTGTGTAAGGG+TGG + chr8_1:61569724-61569743 None:intergenic 45.0%
CACCCTTACACAACAAGAAC+AGG - chr8_1:61569722-61569741 Msa1205370:CDS 45.0%
! ATTTCTGTCTTGTTCACCCG+TGG - chr8_1:61569802-61569821 Msa1205370:CDS 45.0%
CTCAGAAGGCTATAGCAGAT+CGG - chr8_1:61570083-61570102 Msa1205370:CDS 45.0%
TCAGAAGGCTATAGCAGATC+GGG - chr8_1:61570084-61570103 Msa1205370:CDS 45.0%
GCTACAAATGCAGCGCAAAT+CGG - chr8_1:61570147-61570166 Msa1205370:CDS 45.0%
TTGAGACTAAGAGACGAGCT+TGG - chr8_1:61570182-61570201 Msa1205370:CDS 45.0%
TGAGACTAAGAGACGAGCTT+GGG - chr8_1:61570183-61570202 Msa1205370:CDS 45.0%
GGTTGATCTTAAACAACGGG+AGG - chr8_1:61570216-61570235 Msa1205370:CDS 45.0%
CATGTTCCCTTTCCAGGATT+TGG + chr8_1:61570243-61570262 None:intergenic 45.0%
TGAGAAGGAGAAAGACCTAG+TGG - chr8_1:61570291-61570310 Msa1205370:intron 45.0%
ACAAGCCAAGAAAGATCTGC+AGG - chr8_1:61570417-61570436 Msa1205370:CDS 45.0%
AGACTCCTGCAGATCTTTCT+TGG + chr8_1:61570425-61570444 None:intergenic 45.0%
GAAAGATCTGCAGGAGTCTT+TGG - chr8_1:61570426-61570445 Msa1205370:CDS 45.0%
TAACGCAAAGCAGAGATTGG+AGG - chr8_1:61570480-61570499 Msa1205370:intron 45.0%
GAGGTCATCCAAAGTGAAAC+AGG - chr8_1:61570499-61570518 Msa1205370:intron 45.0%
ACAAGTCGCCTGTTTCACTT+TGG + chr8_1:61570510-61570529 None:intergenic 45.0%
! GAATTTGGAGCTATTGGCTG+AGG - chr8_1:61570579-61570598 Msa1205370:CDS 45.0%
! AGGCCAAGTTTGAAGTTGAG+TGG - chr8_1:61570623-61570642 Msa1205370:CDS 45.0%
! GGCCAAGTTTGAAGTTGAGT+GGG - chr8_1:61570624-61570643 Msa1205370:CDS 45.0%
CTCCCACTCAACTTCAAACT+TGG + chr8_1:61570629-61570648 None:intergenic 45.0%
CATGAACATGCTGAGTGGTT+TGG - chr8_1:61570841-61570860 Msa1205370:intron 45.0%
CAGCCCATTCTCGATTTCTT+AGG + chr8_1:61571125-61571144 None:intergenic 45.0%
CATCAGACTCTTACACAAGG+TGG - chr8_1:61571366-61571385 Msa1205370:intron 45.0%
CATCTTTGCAGGAACTCAAG+CGG + chr8_1:61571392-61571411 None:intergenic 45.0%
CTTGAGTTCCTGCAAAGATG+TGG - chr8_1:61571392-61571411 Msa1205370:intron 45.0%
CCTGATGACTTCTGCACAAA+TGG + chr8_1:61571450-61571469 None:intergenic 45.0%
CCATTTGTGCAGAAGTCATC+AGG - chr8_1:61571447-61571466 Msa1205370:CDS 45.0%
! CTCTGTGCATCGTTTTATCC+AGG + chr8_1:61571502-61571521 None:intergenic 45.0%
GTGGCGTATCAGGAGAATTT+CGG + chr8_1:61571533-61571552 None:intergenic 45.0%
! TTTTTCGTGAGTGGCGTATC+AGG + chr8_1:61571543-61571562 None:intergenic 45.0%
GATACGCCACTCACGAAAAA+AGG - chr8_1:61571543-61571562 Msa1205370:CDS 45.0%
!! TAGCAATGGGCAAAAGCACT+TGG - chr8_1:61571599-61571618 Msa1205370:intron 45.0%
!! ACAAGCCACTTGGTAATGGA+CGG - chr8_1:61571628-61571647 Msa1205370:intron 45.0%
ATTTGCCGTCCATTACCAAG+TGG + chr8_1:61571636-61571655 None:intergenic 45.0%
!! ACTTGGTAATGGACGGCAAA+TGG - chr8_1:61571635-61571654 Msa1205370:intron 45.0%
!! CTTGGTAATGGACGGCAAAT+GGG - chr8_1:61571636-61571655 Msa1205370:intron 45.0%
!! TTGGTAATGGACGGCAAATG+GGG - chr8_1:61571637-61571656 Msa1205370:intron 45.0%
!! CGGCAAATGGGGTATTCTTT+TGG - chr8_1:61571648-61571667 Msa1205370:intron 45.0%
! GTTGAAGTACCCTCTCTAGA+TGG - chr8_1:61571687-61571706 Msa1205370:intron 45.0%
GCTAGCATTTCCATCTAGAG+AGG + chr8_1:61571700-61571719 None:intergenic 45.0%
TGCTGATCCACTTGTAGATC+TGG - chr8_1:61571833-61571852 Msa1205370:intron 45.0%
ACCAAGAGCAGAAGAACGAA+TGG - chr8_1:61571869-61571888 Msa1205370:intron 45.0%
! TAGGTAGTGGCCTGATCTAA+AGG + chr8_1:61571903-61571922 None:intergenic 45.0%
AGCACCACTTGTGCTTTCAT+TGG + chr8_1:61572205-61572224 None:intergenic 45.0%
CGAAGAAGCTCGTGTAGTAA+TGG - chr8_1:61572427-61572446 Msa1205370:intron 45.0%
!! GCCTTGTGGTTCTAGTGTAT+TGG - chr8_1:61572580-61572599 Msa1205370:intron 45.0%
CTCCGCTCATAACTTAATGC+TGG - chr8_1:61572757-61572776 Msa1205370:intron 45.0%
TTGTACAGGGACTTTGGATG+TGG - chr8_1:61572782-61572801 Msa1205370:intron 45.0%
TGTACAGGGACTTTGGATGT+GGG - chr8_1:61572783-61572802 Msa1205370:intron 45.0%
! ATCGCGTTTGGAGTTTGCGA+TGG - chr8_1:61567003-61567022 Msa1205370:three_prime_UTR 50.0%
CCGCTTCCAGATCTGTTCAT+CGG + chr8_1:61567101-61567120 None:intergenic 50.0%
CCGATGAACAGATCTGGAAG+CGG - chr8_1:61567098-61567117 Msa1205370:three_prime_UTR 50.0%
AACAGATCTGGAAGCGGCTT+AGG - chr8_1:61567104-61567123 Msa1205370:three_prime_UTR 50.0%
ACAGATCTGGAAGCGGCTTA+GGG - chr8_1:61567105-61567124 Msa1205370:three_prime_UTR 50.0%
TAGGGAGGCTGGATTTGATG+AGG - chr8_1:61567123-61567142 Msa1205370:three_prime_UTR 50.0%
TTGTTGGGCCGTAAAGATGG+TGG - chr8_1:61567463-61567482 Msa1205370:intron 50.0%
TGTTGGGCCGTAAAGATGGT+GGG - chr8_1:61567464-61567483 Msa1205370:intron 50.0%
CCGAGTTCCCACCATCTTTA+CGG + chr8_1:61567474-61567493 None:intergenic 50.0%
!! CCGTAAAGATGGTGGGAACT+CGG - chr8_1:61567471-61567490 Msa1205370:three_prime_UTR 50.0%
!! GGAACTCGGCATTGGTTGTT+TGG - chr8_1:61567485-61567504 Msa1205370:three_prime_UTR 50.0%
TTAGCCGACCTCACTAAGTG+GGG - chr8_1:61567687-61567706 Msa1205370:CDS 50.0%
CTTACCCCACTTAGTGAGGT+CGG + chr8_1:61567694-61567713 None:intergenic 50.0%
AGCATGGACCGGAACTGATT+AGG + chr8_1:61568027-61568046 None:intergenic 50.0%
TGACCATGAAAGCTAAGGCG+TGG + chr8_1:61568479-61568498 None:intergenic 50.0%
TGGGCCTTCTCATATTGGAG+AGG - chr8_1:61568736-61568755 Msa1205370:CDS 50.0%
GGCGTCAAAGATGCATGCAT+AGG - chr8_1:61568897-61568916 Msa1205370:CDS 50.0%
TTCCGTACGCATCTCATGCA+AGG + chr8_1:61569083-61569102 None:intergenic 50.0%
AAGCGCGTGAAGATATCCTC+AGG - chr8_1:61569275-61569294 Msa1205370:CDS 50.0%
TCATCACAGCTGTGAGAGAC+GGG + chr8_1:61569462-61569481 None:intergenic 50.0%
ATCCTCGCTCAACCAAAGAG+AGG - chr8_1:61569572-61569591 Msa1205370:CDS 50.0%
ATCCTCTCTTTGGTTGAGCG+AGG + chr8_1:61569577-61569596 None:intergenic 50.0%
!!! GGCTGGTTTTCTTGTCATGG+AGG + chr8_1:61569686-61569705 None:intergenic 50.0%
AACCAGCCTACAACTACTGG+AGG - chr8_1:61569698-61569717 Msa1205370:CDS 50.0%
GAGACGAGCTTGGGAATTGA+AGG - chr8_1:61570192-61570211 Msa1205370:CDS 50.0%
ACGAGCTTGGGAATTGAAGG+AGG - chr8_1:61570195-61570214 Msa1205370:CDS 50.0%
GGAGGACCAAATCCTGGAAA+GGG - chr8_1:61570234-61570253 Msa1205370:intron 50.0%
CCAACTCATGTTCCCTTTCC+AGG + chr8_1:61570249-61570268 None:intergenic 50.0%
CCTGGAAAGGGAACATGAGT+TGG - chr8_1:61570246-61570265 Msa1205370:intron 50.0%
GAGCAGTTGACAGTTCCACT+AGG + chr8_1:61570309-61570328 None:intergenic 50.0%
! AAGCCTCAAAGCGTCTGAGA+AGG - chr8_1:61570345-61570364 Msa1205370:intron 50.0%
ACTCCTTCTCAGACGCTTTG+AGG + chr8_1:61570351-61570370 None:intergenic 50.0%
GCAGGAGTCTTTGGCATCTT+TGG - chr8_1:61570435-61570454 Msa1205370:CDS 50.0%
TGGCACATGAACATGCTGAG+TGG - chr8_1:61570836-61570855 Msa1205370:intron 50.0%
CTTCCCGCCTCTTCTCAATA+AGG + chr8_1:61570933-61570952 None:intergenic 50.0%
! TGGCGTTCTTCTGAAAAGGC+AGG + chr8_1:61571768-61571787 None:intergenic 50.0%
AAGAACGCCAAGTAGGCAGA+GGG - chr8_1:61571778-61571797 Msa1205370:intron 50.0%
! CTCTTTTCCCTCTGCCTACT+TGG + chr8_1:61571788-61571807 None:intergenic 50.0%
CAAGTAGGCAGAGGGAAAAG+AGG - chr8_1:61571786-61571805 Msa1205370:intron 50.0%
TTCTGCGCCAGATCTACAAG+TGG + chr8_1:61571843-61571862 None:intergenic 50.0%
GCCATTCGTTCTTCTGCTCT+TGG + chr8_1:61571873-61571892 None:intergenic 50.0%
TAGATCAGGCCACTACCTAC+TGG - chr8_1:61571904-61571923 Msa1205370:intron 50.0%
TCAGAGATTCAGCAGGTGTC+AGG - chr8_1:61572377-61572396 Msa1205370:intron 50.0%
!! CTGGCTTTGTACAGGGACTT+TGG - chr8_1:61572776-61572795 Msa1205370:intron 50.0%
!! TGGATGTGGGCATTGGTAGT+TGG - chr8_1:61572796-61572815 Msa1205370:intron 50.0%
TGTTGATGCTGTACTGGGCT+AGG - chr8_1:61573430-61573449 Msa1205370:five_prime_UTR 50.0%
GACAGAGGTTTGGCAGAGCT+AGG + chr8_1:61567040-61567059 None:intergenic 55.0%
!! AGATGGTGGGAACTCGGCAT+TGG - chr8_1:61567477-61567496 Msa1205370:three_prime_UTR 55.0%
GTCAAATCACTAGGGGGCAG+AGG - chr8_1:61567567-61567586 Msa1205370:intron 55.0%
AATCACTAGGGGGCAGAGGA+AGG - chr8_1:61567571-61567590 Msa1205370:intron 55.0%
ACAAATGGCTGCGGATCCAC+AGG + chr8_1:61567867-61567886 None:intergenic 55.0%
GGCCTTGCATGAGATGCGTA+CGG - chr8_1:61569078-61569097 Msa1205370:CDS 55.0%
CGCGTGAAGATATCCTCAGG+CGG - chr8_1:61569278-61569297 Msa1205370:CDS 55.0%
GCTGTGAGAGACGGGAAAGA+GGG + chr8_1:61569454-61569473 None:intergenic 55.0%
AGCTGTGAGAGACGGGAAAG+AGG + chr8_1:61569455-61569474 None:intergenic 55.0%
ACAACGGGAGGACCAAATCC+TGG - chr8_1:61570228-61570247 Msa1205370:intron 55.0%
GGGAGGACCAAATCCTGGAA+AGG - chr8_1:61570233-61570252 Msa1205370:intron 55.0%
! GTGGTTTGGCAAGATGCAGC+AGG - chr8_1:61570855-61570874 Msa1205370:intron 55.0%
!! AGGAGCGAGCGGATTTTCAG+CGG - chr8_1:61570875-61570894 Msa1205370:intron 55.0%
TGAGAAGAGGCGGGAAGAAG+TGG - chr8_1:61570936-61570955 Msa1205370:intron 55.0%
GAGAATCGAGCAGCACTAGC+AGG + chr8_1:61571480-61571499 None:intergenic 55.0%
! CTAGTGCTGCTCGATTCTCC+TGG - chr8_1:61571481-61571500 Msa1205370:CDS 55.0%
GAAGAACGCCAAGTAGGCAG+AGG - chr8_1:61571777-61571796 Msa1205370:intron 55.0%
GGGACTTTGGATGTGGGCAT+TGG - chr8_1:61572789-61572808 Msa1205370:intron 55.0%
! GCTTTTGGCACAATGCTGGG+TGG - chr8_1:61573249-61573268 Msa1205370:CDS 55.0%
! GATGCTGTACTGGGCTAGGT+TGG - chr8_1:61573434-61573453 Msa1205370:five_prime_UTR 55.0%
GATCTGGAAGCGGCTTAGGG+AGG - chr8_1:61567108-61567127 Msa1205370:three_prime_UTR 60.0%
GGCCTCCAGTAGTTGTAGGC+TGG + chr8_1:61569703-61569722 None:intergenic 60.0%
GGGTGGCCTCCAGTAGTTGT+AGG + chr8_1:61569707-61569726 None:intergenic 60.0%
CAAGATGCAGCAGGAGCGAG+CGG - chr8_1:61570864-61570883 Msa1205370:intron 60.0%
!! GGAGCGAGCGGATTTTCAGC+GGG - chr8_1:61570876-61570895 Msa1205370:intron 60.0%
TGGAAGCGGCTTAGGGAGGC+TGG - chr8_1:61567112-61567131 Msa1205370:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 61566796 61573523 61566796 ID=Msa1205370;Name=Msa1205370
chr8_1 mRNA 61566796 61573523 61566796 ID=Msa1205370-mRNA-1;Parent=Msa1205370;Name=Msa1205370-mRNA-1;_AED=0.03;_eAED=0.03;_QI=226|1|1|1|0.75|0.77|9|597|1053
chr8_1 exon 61566796 61567329 61566796 ID=Msa1205370-mRNA-1:exon:19983;Parent=Msa1205370-mRNA-1
chr8_1 exon 61567467 61567529 61567467 ID=Msa1205370-mRNA-1:exon:19982;Parent=Msa1205370-mRNA-1
chr8_1 exon 61567661 61567967 61567661 ID=Msa1205370-mRNA-1:exon:19981;Parent=Msa1205370-mRNA-1
chr8_1 exon 61568394 61570243 61568394 ID=Msa1205370-mRNA-1:exon:19980;Parent=Msa1205370-mRNA-1
chr8_1 exon 61570392 61570475 61570392 ID=Msa1205370-mRNA-1:exon:19979;Parent=Msa1205370-mRNA-1
chr8_1 exon 61570576 61570846 61570576 ID=Msa1205370-mRNA-1:exon:19978;Parent=Msa1205370-mRNA-1
chr8_1 exon 61570996 61571249 61570996 ID=Msa1205370-mRNA-1:exon:19977;Parent=Msa1205370-mRNA-1
chr8_1 exon 61571396 61571605 61571396 ID=Msa1205370-mRNA-1:exon:19976;Parent=Msa1205370-mRNA-1
chr8_1 exon 61573112 61573523 61573112 ID=Msa1205370-mRNA-1:exon:19975;Parent=Msa1205370-mRNA-1
chr8_1 five_prime_UTR 61573298 61573523 61573298 ID=Msa1205370-mRNA-1:five_prime_utr;Parent=Msa1205370-mRNA-1
chr8_1 CDS 61573112 61573297 61573112 ID=Msa1205370-mRNA-1:cds;Parent=Msa1205370-mRNA-1
chr8_1 CDS 61571396 61571605 61571396 ID=Msa1205370-mRNA-1:cds;Parent=Msa1205370-mRNA-1
chr8_1 CDS 61570996 61571249 61570996 ID=Msa1205370-mRNA-1:cds;Parent=Msa1205370-mRNA-1
chr8_1 CDS 61570576 61570846 61570576 ID=Msa1205370-mRNA-1:cds;Parent=Msa1205370-mRNA-1
chr8_1 CDS 61570392 61570475 61570392 ID=Msa1205370-mRNA-1:cds;Parent=Msa1205370-mRNA-1
chr8_1 CDS 61568394 61570243 61568394 ID=Msa1205370-mRNA-1:cds;Parent=Msa1205370-mRNA-1
chr8_1 CDS 61567661 61567967 61567661 ID=Msa1205370-mRNA-1:cds;Parent=Msa1205370-mRNA-1
chr8_1 three_prime_UTR 61567467 61567529 61567467 ID=Msa1205370-mRNA-1:three_prime_utr;Parent=Msa1205370-mRNA-1
chr8_1 three_prime_UTR 61566796 61567329 61566796 ID=Msa1205370-mRNA-1:three_prime_utr;Parent=Msa1205370-mRNA-1
Gene Sequence

>Msa1205370

ATGGAGATTTCGACACCTAGCTCTGCCAAACCTCTGTCAATTACTCCGAGTTCTAGGGTTTTGAGAAGTCCACTTTCCGATGAACAGATCTGGAAGCGGCTTAGGGAGGCTGGATTTGATGAGGAATCGATTAAGCATAAGGATAAAGCTGCGCTTGTAGCTTATATTGCTAAGCTTGAAGCTGAGATATATGATCATCAACATCATATGGGCCTTCTCATATTGGAGAGGAAGGAATTGGTTTCCAAGTATGAACATGTTAAAACCATGGTCGAGTCATCTGAGTTAGTGCATAACCGTGATTTGTCCACGAATAAATCTGCGTTAGCTGAATCAAGAAAACGGGAAGAATCTTTGAAGAAGACAATAGGCGTCAAAGATGCATGCATAGGAAGTCTTGAGAAGGCCTTGCATGAGATGCGTACGGAATGTGCTGAAACAAAGGTTGCAGCTGAAAGTAAATTAGCTGAAGCACATCAATTGACAGATGAAGCAGAAAAGAAATTTACGGAGGCTGAAGCTAAAGTGCGTGCTGCAGAATCTTTGCAAGCAGATGCTAATCGATATAACAGTGTTGCAGAAAGGAAGCTTCGTGATGTTGAAGCGCGTGAAGATATCCTCAGGCGGCAAATTATATCTTTCAAGTCAGACTGTGATGAAAAAGATAAGGAGATGAATCTTGAGAGGCAATCCCTTTCTGAAAGGCAAAAGGTTTTACAACAAGAACAGGAAAGGTTACTTCAATCACAATCCTCGCTCAACCAAAGAGAGGATCATCTTTTTAGTAGATCCCAGGAATTAGATCGTCTTCAAAAAGAGTTGGAGGACACAAAGTTTAAACTTGAAAAGGAAAATGAAGCCCTCCATGACAAGAAAACCAGCCTACAACTACTGGAGGCCACCCTTACACAACAAGAACAGGCACTCACTAAATGGAAAACTGAGCTTAACAAGAAAGAGCAAGAGTTGCTTGAATTTGAAGTGAAACTTTCTAATAGAGAATCTGATGAAACTCAGAAGGCTATAGCAGATCGGGAAGCCACAATGAGAGCAAAAAAACATGATTTAGAAGTTGAGCTACAAATGCAGCGCAAATCGGTTGAAAATGAAATTGAGACTAAGAGACGAGCTTGGGAATTGAAGGAGGTTGATCTTAAACAACGGGAGGACCAAATCCTGGAAAGGGAACATGAGTTGGAAGTTCTATCAAGATCACTGAGTGAGAAGGAGAAAGACCTAGTGGAACTGTCAACTGCTCTTAAAGATAAAGATCAAAGCCTCAAAGCGTCTGAGAAGGAGTTTGAATTAAACACAACCCTTTTGCAAAAGGAGAAAGATGATATTGAACAAGCCAAGAAAGATCTGCAGGAGTCTTTGGCATCTTTGGAAAATGAAAAAAGACAAGTTGATAACGCAAAGCAGAGATTGGAGGTCATCCAAAGTGAAACAGGCGACTTGTCAATTTTTGAAGTGAAACTAAAGGAAGAGATTGATCTTGTAAGATCTCAGAATTTGGAGCTATTGGCTGAGGCTGATAAGTTGAAAGCTGAGAAGGCCAAGTTTGAAGTTGAGTGGGAGCTTCTTGATGAAAAAAAAGAAGAGTTGCGGAAAGAAGCAGAATTTATAGAAAATGAAAGGAAGGCAGTTTCCACTTTTATTAAGAATGAGCGCGACAAGCTAAGAGAAGAAAAGGAAAATTTGCGTAAACAGTACACCCATGACTTGGGGTTACTTGCTAGTGAACGGGAAAATTTCATGAAGAAGATGGCACATGAACATGCTGAGTGGTTTGGCAAGATGCAGCAGGAGCGAGCGGATTTTCAGCGGGATATTGAGATGCAAAAAAGGGAGCTAAATAACCTTATTGAGAAGAGGCGGGAAGAAGTGGAAAGTTATTTGAAGGAAAGAGAAACAGCTTTTGAGGAAGAGAAGAATAGGGAGCTCCAGCATATTGATGCTCTTAAGGAGAAAGCTGCAAAAGAATTGGAACAGGTTTCCTTGGAGATGAAAAGGCTTCAAACTGAGCGGACTGAGATAAATTTGGATCGTGACCTAAGAAATCGAGAATGGGCTGAACTAAATAATTGTATTAAAGAACTTGAGGTTCAAAGGGATAAACTACAAAAACAGAGAGAACTGTTGCATGCTGATAGAATCAACATTTATTCTAAGACTGAAGAATTGAAGAAATTGGAAGATTCAAAAGTTGTCTCTGATGACCTTGCTATTGTTGAAATGCTTAAATCTGATATGGAGTATAACCAACAGAAAATATCTTCAAGGAAAAATTTGAAGCATCAGACTCTTACACAAGGTGGCCGCTTGAGTTCCTGCAAAGATGTGGATGTTGATAACATTGGCAATGGGTTTGATACTCCATTTGTGCAGAAGTCATCAGGTGTTTCTCCTGCTAGTGCTGCTCGATTCTCCTGGATAAAACGATGCACAGAGCTAATATTCCGAAATTCTCCTGATACGCCACTCACGAAAAAAGGAAATTTGGCTGTGGCTTCTGATACAAATAATGGTAGCAATGGGCAAAAGCACTTGGAAAATGACAAGCCACTTGGTAATGGACGGCAAATGGGGTATTCTTTTGGAGAACCAAAAGTAATTGTTGAAGTACCCTCTCTAGATGGAAATGCTAGCAGAACAAGCGAGCTCAAATCTGTGACTAAAGATGTTAATGGGAAACCTGCCTTTTCAGAAGAACGCCAAGTAGGCAGAGGGAAAAGAGGCAGAGAGAACTTGATTACTAAAGTTGCTGATCCACTTGTAGATCTGGCGCAGAATAAGAAACCAAGAGCAGAAGAACGAATGGCCAAAAATCCTTTAGATCAGGCCACTACCTACTGTGTGCATTCAACCCAGTCAGATATATCAGAGATTCAGCAGGTGTCAGGTGCTTCAAATCATAAAAAAGGGAACACCGAAGAAGCTCGTGTAGTAATGGTTGATAAGGTTATTCATGTTTCAGAAGTGACTTCTGAGAAAGTTGATACTCTCATCATTCCCAATCAAGATAATCTGCACAGAGAAACAATCGATCAGTCAAACTCTAAAACTAGATCCGAAGAAATTTTGCCTTGTGGTTCTAGTGTATTGGAGAACACAGAAGGAATACGGCAAGAAAACACTGAACCTGTTTCCGATTACTGTTAG

Protein sequence

>Msa1205370

MEISTPSSAKPLSITPSSRVLRSPLSDEQIWKRLREAGFDEESIKHKDKAALVAYIAKLEAEIYDHQHHMGLLILERKELVSKYEHVKTMVESSELVHNRDLSTNKSALAESRKREESLKKTIGVKDACIGSLEKALHEMRTECAETKVAAESKLAEAHQLTDEAEKKFTEAEAKVRAAESLQADANRYNSVAERKLRDVEAREDILRRQIISFKSDCDEKDKEMNLERQSLSERQKVLQQEQERLLQSQSSLNQREDHLFSRSQELDRLQKELEDTKFKLEKENEALHDKKTSLQLLEATLTQQEQALTKWKTELNKKEQELLEFEVKLSNRESDETQKAIADREATMRAKKHDLEVELQMQRKSVENEIETKRRAWELKEVDLKQREDQILEREHELEVLSRSLSEKEKDLVELSTALKDKDQSLKASEKEFELNTTLLQKEKDDIEQAKKDLQESLASLENEKRQVDNAKQRLEVIQSETGDLSIFEVKLKEEIDLVRSQNLELLAEADKLKAEKAKFEVEWELLDEKKEELRKEAEFIENERKAVSTFIKNERDKLREEKENLRKQYTHDLGLLASERENFMKKMAHEHAEWFGKMQQERADFQRDIEMQKRELNNLIEKRREEVESYLKERETAFEEEKNRELQHIDALKEKAAKELEQVSLEMKRLQTERTEINLDRDLRNREWAELNNCIKELEVQRDKLQKQRELLHADRINIYSKTEELKKLEDSKVVSDDLAIVEMLKSDMEYNQQKISSRKNLKHQTLTQGGRLSSCKDVDVDNIGNGFDTPFVQKSSGVSPASAARFSWIKRCTELIFRNSPDTPLTKKGNLAVASDTNNGSNGQKHLENDKPLGNGRQMGYSFGEPKVIVEVPSLDGNASRTSELKSVTKDVNGKPAFSEERQVGRGKRGRENLITKVADPLVDLAQNKKPRAEERMAKNPLDQATTYCVHSTQSDISEIQQVSGASNHKKGNTEEARVVMVDKVIHVSEVTSEKVDTLIIPNQDNLHRETIDQSNSKTRSEEILPCGSSVLENTEGIRQENTEPVSDYC*