AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0432500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0432500 MtrunA17_Chr3g0137541 82.468 154 2 2 1 154 1 129 6.69e-90 277
Msa0432500 MtrunA17_Chr2g0333251 44.526 137 50 3 15 150 45 156 9.65e-32 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0432500 AT4G32160.1 64.935 154 29 2 1 154 2 130 7.71e-71 228
Msa0432500 AT2G25350.1 60.390 154 36 2 1 154 1 129 5.97e-67 216
Msa0432500 AT2G25350.2 60.390 154 36 2 1 154 1 129 7.25e-66 214
Msa0432500 AT2G25350.4 60.390 154 36 2 1 154 1 129 1.27e-62 202
Msa0432500 AT2G25350.5 60.390 154 36 2 1 154 1 129 1.53e-62 203
Msa0432500 AT2G25350.3 60.390 154 36 2 1 154 1 129 1.53e-62 203
Msa0432500 AT3G15920.1 55.629 151 42 3 4 154 64 189 4.64e-54 184

Find 201 sgRNAs with CRISPR-Local

Find 452 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTCACATTTCTCCTTTA+TGG 0.098755 3_2:-84648648 None:intergenic
TCATATGATTCTTCACTTCT+AGG 0.124218 3_2:+84647543 Msa0432500:three_prime_UTR
GGTAGTGACATGTCTAATTT+TGG 0.135817 3_2:+84647672 Msa0432500:three_prime_UTR
GGATCTGAATTCTTTGATTT+TGG 0.143999 3_2:-84643962 None:intergenic
TATTGATGAGGGTTTGTTTA+TGG 0.150863 3_2:+84647422 Msa0432500:three_prime_UTR
TTGTTGCATGTTTGGGATTA+TGG 0.172769 3_2:+84646139 Msa0432500:CDS
GCCTGGGCATGCTAAAGTTT+TGG 0.180319 3_2:+84647593 Msa0432500:three_prime_UTR
TGTACACGTGGCTTCTTTAA+TGG 0.199414 3_2:-84642501 None:intergenic
TTACTAGCATGTTGAAAATT+AGG 0.201435 3_2:+84646234 Msa0432500:exon
CACCGAATAATCCGTGTTAT+TGG 0.207210 3_2:-84647190 None:intergenic
GGAGTCCTGCACCTCGAAAA+TGG 0.227854 3_2:+84642828 Msa0432500:CDS
TCCCGCCCATTCTGTGTAAT+TGG 0.256896 3_2:-84643869 None:intergenic
AATACCAATTGTTGCATGTT+TGG 0.266400 3_2:+84646131 Msa0432500:CDS
TTATCATCCTGTCCAATTCT+TGG 0.267529 3_2:-84647315 None:intergenic
TCATCTGTTGCGTCAGATTA+TGG 0.273295 3_2:+84647255 Msa0432500:three_prime_UTR
GATGGCTCTGTCGACCTTCC+TGG 0.289026 3_2:+84647714 Msa0432500:three_prime_UTR
ATTGATGAGGGTTTGTTTAT+GGG 0.291776 3_2:+84647423 Msa0432500:three_prime_UTR
ATTGCATTATAATACCTTCT+TGG 0.298355 3_2:+84643930 Msa0432500:CDS
GAGCCATCACCAGATGAATT+TGG 0.300939 3_2:-84647699 None:intergenic
GATCATATCAGATTTGTTCT+TGG 0.302019 3_2:+84649508 Msa0432500:three_prime_UTR
ATAGAGAAGCTTGTAAAATA+TGG 0.308920 3_2:+84647390 Msa0432500:three_prime_UTR
ATCTGTTCAGGTCAAGGATT+TGG 0.309445 3_2:+84648132 Msa0432500:intron
CAAGGGAGATATTAAAGTTC+TGG 0.313417 3_2:+84648565 Msa0432500:three_prime_UTR
GTTCCTTCTTCAATTCTGTT+TGG 0.316758 3_2:-84648616 None:intergenic
TTCCTTCTTCAATTCTGTTT+GGG 0.323271 3_2:-84648615 None:intergenic
TACTCAAATGCAATGGGATA+TGG 0.328309 3_2:+84648231 Msa0432500:three_prime_UTR
GCAGAACGATGTGCTGTTGC+AGG 0.334516 3_2:+84648475 Msa0432500:three_prime_UTR
CTTGATTTAATCTAACTATA+AGG 0.336717 3_2:-84647899 None:intergenic
TGGATATTTGTAATCCCTTC+TGG 0.337338 3_2:-84644923 None:intergenic
GCTGTCTATGTAGCTTAAAA+AGG 0.340648 3_2:+84646006 Msa0432500:intron
TTCCAATAACACGGATTATT+CGG 0.345896 3_2:+84647188 Msa0432500:three_prime_UTR
ATACCAATTGTTGCATGTTT+GGG 0.352344 3_2:+84646132 Msa0432500:CDS
TTGCATTATAATACCTTCTT+GGG 0.352481 3_2:+84643931 Msa0432500:CDS
TCACTCTATCTTTCTACAAT+TGG 0.354479 3_2:-84642717 None:intergenic
CAGTCAGTACTGGGCATGTT+AGG 0.361645 3_2:+84643243 Msa0432500:CDS
CGACCTTCCTGGATCTGCTT+CGG 0.362574 3_2:+84647725 Msa0432500:three_prime_UTR
TACAAGGCATGCTCTCAAAT+TGG 0.362742 3_2:+84649565 Msa0432500:three_prime_UTR
TTGATCAACTTTACCACTAT+AGG 0.370104 3_2:-84643983 None:intergenic
CACACAAAATTGAAAAGTTC+TGG 0.370980 3_2:+84647774 Msa0432500:three_prime_UTR
GCTACAGAGAAGGCGCTCTT+TGG 0.378552 3_2:+84646915 Msa0432500:intron
TACATTAGAAGCTGCACTTC+CGG 0.379999 3_2:-84649432 None:intergenic
ATTGAAAAGCCGAGCTTTGT+TGG 0.385083 3_2:+84646078 Msa0432500:CDS
TGTAAAATTAACTCGCCTAT+AGG 0.396509 3_2:-84649725 None:intergenic
GTGCAATCATCTCTCCATTC+GGG 0.402724 3_2:+84647210 Msa0432500:three_prime_UTR
TAGACGGAAGTCACTGGAAA+TGG 0.403568 3_2:+84648261 Msa0432500:three_prime_UTR
CCCTTTCCAATTACACAGAA+TGG 0.404012 3_2:+84643863 Msa0432500:CDS
TTTCAATCGCATGAGTCCCT+TGG 0.410016 3_2:-84646062 None:intergenic
CAGAACTTTAATATCTCCCT+TGG 0.410861 3_2:-84648564 None:intergenic
CGAGCTTTGTTGGAAGAGGT+TGG 0.415118 3_2:+84646088 Msa0432500:CDS
GAAGTAGGAACTCCAAGAAT+TGG 0.415171 3_2:+84647303 Msa0432500:three_prime_UTR
AGTCCCTTGGGTGGCGCTGG+AGG 0.415381 3_2:-84646049 None:intergenic
ATCAATGTCAGACAATAGTT+TGG 0.415454 3_2:-84646950 None:intergenic
TAATCAAAATTTGCAATTGA+CGG 0.415681 3_2:-84642672 None:intergenic
CTGCTAGTAGGATGTCAATT+TGG 0.416430 3_2:-84649239 None:intergenic
GTCCCATCGTGTCTATGCTT+TGG 0.417043 3_2:-84642779 None:intergenic
CACTGCCTCTTGGCATGGAT+TGG 0.421999 3_2:+84642807 Msa0432500:CDS
TTCAATCGCATGAGTCCCTT+GGG 0.424288 3_2:-84646061 None:intergenic
TTTGGGATTCCAAATTCATC+TGG 0.424544 3_2:+84647690 Msa0432500:three_prime_UTR
GGTGCAATCATCTCTCCATT+CGG 0.424766 3_2:+84647209 Msa0432500:three_prime_UTR
CACTTCCGGTGTCCTTCTCT+AGG 0.431799 3_2:-84649418 None:intergenic
TTCGCCACTGCCTCTTGGCA+TGG 0.432596 3_2:+84642802 Msa0432500:CDS
CGTAACATTGTTCACATGTC+TGG 0.436461 3_2:-84647496 None:intergenic
ATGAGTCCCTTGGGTGGCGC+TGG 0.437452 3_2:-84646052 None:intergenic
GAGCTTTGTTGGAAGAGGTT+GGG 0.443540 3_2:+84646089 Msa0432500:CDS
CTGTGAATTTACCTTTGGAC+TGG 0.444137 3_2:-84643270 None:intergenic
ACGATGATTGTGTGGCCATT+CGG 0.444748 3_2:-84643894 None:intergenic
CTTGAAACCGAAGCAGATCC+AGG 0.444794 3_2:-84647732 None:intergenic
ACTATTCTAGAGCAATTAGA+AGG 0.445905 3_2:+84647450 Msa0432500:three_prime_UTR
GGGACTTCGCCACTGCCTCT+TGG 0.448090 3_2:+84642797 Msa0432500:CDS
TGAAAGAGAAAAGAGTGAAC+AGG 0.451485 3_2:+84649059 Msa0432500:three_prime_UTR
GGAACTTAGTGAGTCCATAA+AGG 0.452089 3_2:+84648634 Msa0432500:three_prime_UTR
GTCCCTTGGGTGGCGCTGGA+GGG 0.458980 3_2:-84646048 None:intergenic
AATCCCAAACATGCAACAAT+TGG 0.460348 3_2:-84646135 None:intergenic
TAATCCGTGTTATTGGAATC+AGG 0.462417 3_2:-84647183 None:intergenic
TCATTAAAGGACAGTTCTAC+AGG 0.462888 3_2:+84644879 Msa0432500:intron
CAGGATGATAATTCTGAAGT+TGG 0.463087 3_2:+84647327 Msa0432500:three_prime_UTR
ATCAACGCAATAAACTGAAC+AGG 0.468232 3_2:+84647823 Msa0432500:three_prime_UTR
AGACATGTGAACAATGTTAC+GGG 0.471076 3_2:+84647498 Msa0432500:three_prime_UTR
ACAGAGAAGGCGCTCTTTGG+AGG 0.477031 3_2:+84646918 Msa0432500:intron
TATAATGCAATAACTCCAAC+CGG 0.477943 3_2:-84643918 None:intergenic
AAGATTTACTCAAATGCAAT+GGG 0.480298 3_2:+84648225 Msa0432500:three_prime_UTR
CCTTTCCAATTACACAGAAT+GGG 0.485927 3_2:+84643864 Msa0432500:CDS
TCGGGCTTATCATTAGCTGC+TGG 0.487638 3_2:+84647228 Msa0432500:three_prime_UTR
TGCAAAATAATTATTCGTAC+AGG 0.489877 3_2:-84649779 None:intergenic
TTCTCCGATCGGATCGATGA+AGG 0.492549 3_2:-84642630 None:intergenic
GATGAAACTTAAGTCTGAAT+CGG 0.495271 3_2:+84648285 Msa0432500:three_prime_UTR
TGTGAATTTACCTTTGGACT+GGG 0.495993 3_2:-84643269 None:intergenic
GAGTCCTGCACCTCGAAAAT+GGG 0.496052 3_2:+84642829 Msa0432500:CDS
TATTAAAGTTCTGGTTAAAG+AGG 0.500220 3_2:+84648574 Msa0432500:three_prime_UTR
AAGCTTTCAAATGAAAGTGT+TGG 0.501521 3_2:+84647627 Msa0432500:three_prime_UTR
AATGAAAGTGTTGGAAGTGA+TGG 0.501811 3_2:+84647636 Msa0432500:three_prime_UTR
TTCAAGAGAAACAGATATTG+TGG 0.502530 3_2:+84647749 Msa0432500:three_prime_UTR
TCAATTCTGTTTGGGAACTA+CGG 0.503298 3_2:-84648607 None:intergenic
CTGGCATTTACTTTATGCCT+AGG 0.504098 3_2:-84647477 None:intergenic
AAGCCGAGCTTTGTTGGAAG+AGG 0.504103 3_2:+84646084 Msa0432500:CDS
CCATTCTGTGTAATTGGAAA+GGG 0.504200 3_2:-84643863 None:intergenic
CCATCGTGTCTATGCTTTGG+AGG 0.506070 3_2:-84642776 None:intergenic
AGATGCTGCTAGAGAGCAGC+TGG 0.507403 3_2:+84648502 Msa0432500:three_prime_UTR
GCGTAAGCACAGTGGAAGAA+TGG 0.510389 3_2:-84642593 None:intergenic
GATCGTTTACTGAATTCTGC+TGG 0.511534 3_2:-84647161 None:intergenic
CAGACATGTGAACAATGTTA+CGG 0.513568 3_2:+84647497 Msa0432500:three_prime_UTR
CAACCTCTTCCAACAAAGCT+CGG 0.515780 3_2:-84646087 None:intergenic
CATCCCTCCAGCGCCACCCA+AGG 0.522811 3_2:+84646045 Msa0432500:CDS
GTGAACAGGCAGAAACTGCT+TGG 0.523674 3_2:+84649073 Msa0432500:three_prime_UTR
TGAACCTTCTTAGTACTCCA+TGG 0.524087 3_2:-84644943 None:intergenic
AAAGAATTCAGATCCTATAG+TGG 0.524287 3_2:+84643970 Msa0432500:CDS
TCCAATTACACAGAATGGGC+GGG 0.525347 3_2:+84643868 Msa0432500:CDS
AGTAATTAAATTCAAGCAAG+AGG 0.527343 3_2:-84646174 None:intergenic
AAAGATTTACTCAAATGCAA+TGG 0.527444 3_2:+84648224 Msa0432500:three_prime_UTR
TTCTTTCGACCATGCAGAGA+AGG 0.532922 3_2:+84647847 Msa0432500:three_prime_UTR
AGGAACTCCAAGAATTGGAC+AGG 0.533535 3_2:+84647308 Msa0432500:three_prime_UTR
AAATTTGCAATTGACGGCAC+CGG 0.537631 3_2:-84642666 None:intergenic
TAACTTGTACCTCTGCTAGT+AGG 0.539656 3_2:-84649251 None:intergenic
CAATCCATGCCAAGAGGCAG+TGG 0.540638 3_2:-84642806 None:intergenic
CCCATTCTGTGTAATTGGAA+AGG 0.540748 3_2:-84643864 None:intergenic
GGAACTTAGACGGAAGTCAC+TGG 0.542430 3_2:+84648255 Msa0432500:three_prime_UTR
ATCCCTCCAGCGCCACCCAA+GGG 0.543505 3_2:+84646046 Msa0432500:CDS
AAATCAAGAAATAGCTGCAA+AGG 0.546074 3_2:+84647914 Msa0432500:three_prime_UTR
AGTGGAGTCAAGGTCAAAAG+TGG 0.546119 3_2:-84649675 None:intergenic
TGATACCAGGATGGAAATGT+TGG 0.546262 3_2:+84648422 Msa0432500:intron
AGAAAACAGCTTGAGAAATG+TGG 0.546835 3_2:+84649096 Msa0432500:three_prime_UTR
GGCATATCAAATATTGATGA+GGG 0.547371 3_2:+84647411 Msa0432500:three_prime_UTR
CCCAAAACTTTAGCATGCCC+AGG 0.547727 3_2:-84647594 None:intergenic
AAAACCAATGACATAAAAGA+TGG 0.549854 3_2:+84649458 Msa0432500:three_prime_UTR
AACAGACAAACCGTGTTACA+AGG 0.550327 3_2:+84649549 Msa0432500:three_prime_UTR
AGCAATTAGAAGGACTTCCT+AGG 0.550544 3_2:+84647460 Msa0432500:three_prime_UTR
TCGTACAGGTATACATACAC+TGG 0.551025 3_2:-84649765 None:intergenic
GCTGGAGGGATGTTTCTCCT+TGG 0.553615 3_2:-84646034 None:intergenic
CCATACGATGCATCGGAAGT+AGG 0.554564 3_2:+84647288 Msa0432500:three_prime_UTR
TCAAGAGAAACAGATATTGT+GGG 0.554679 3_2:+84647750 Msa0432500:three_prime_UTR
AGCGGATGAGAGAATCCTAT+AGG 0.557149 3_2:+84649710 Msa0432500:three_prime_UTR
CGTACAGGTATACATACACT+GGG 0.557253 3_2:-84649764 None:intergenic
AAATAAGGAGAACTTGCAGC+AGG 0.557345 3_2:+84648183 Msa0432500:three_prime_UTR
TTTGGCACGAAGACCCAAGA+AGG 0.558048 3_2:-84643944 None:intergenic
GAAGGCGCTCTTTGGAGGAG+TGG 0.558280 3_2:+84646923 Msa0432500:three_prime_UTR
GAAAACAGCTTGAGAAATGT+GGG 0.559042 3_2:+84649097 Msa0432500:three_prime_UTR
GAAGGGATTACAAATATCCA+TGG 0.563612 3_2:+84644926 Msa0432500:CDS
AGCAGGCTATTCTGATTGAG+AGG 0.569251 3_2:+84648200 Msa0432500:three_prime_UTR
CCTACTTCCGATGCATCGTA+TGG 0.569440 3_2:-84647288 None:intergenic
ATATCCATGGAGTACTAAGA+AGG 0.570085 3_2:+84644939 Msa0432500:CDS
AGTGACTAGCCTTCTCTGCA+TGG 0.570494 3_2:-84647856 None:intergenic
TTCTGTGTAATTGGAAAGGG+AGG 0.573428 3_2:-84643860 None:intergenic
TTCCTTACGAAGATGAGGAC+AGG 0.574686 3_2:+84649157 Msa0432500:three_prime_UTR
GTCCTGTCCTCATCTTCGTA+AGG 0.577035 3_2:-84649159 None:intergenic
TTCCCAAACAGAATTGAAGA+AGG 0.577388 3_2:+84648613 Msa0432500:three_prime_UTR
TTAATTACTTTATACAAACA+TGG 0.578237 3_2:+84646188 Msa0432500:CDS
AGTTTATTGCGTTGATCTAG+CGG 0.578865 3_2:-84647816 None:intergenic
AGTTTCTAGCTCAAGAAATG+AGG 0.578988 3_2:-84646995 None:intergenic
ATTCCAAATTCATCTGGTGA+TGG 0.581544 3_2:+84647696 Msa0432500:three_prime_UTR
AAAGCTAGGGTTTCTCCGAT+CGG 0.588212 3_2:-84642641 None:intergenic
TGGCATATCAAATATTGATG+AGG 0.588442 3_2:+84647410 Msa0432500:three_prime_UTR
TATTGCGTTGATCTAGCGGA+AGG 0.591173 3_2:-84647812 None:intergenic
TCAAATGCAATGGGATATGG+AGG 0.591718 3_2:+84648234 Msa0432500:three_prime_UTR
ATAGGATTCTCTCATCCGCT+AGG 0.593903 3_2:-84649707 None:intergenic
CGATCCTGATTCCAATAACA+CGG 0.596415 3_2:+84647179 Msa0432500:three_prime_UTR
TTCCAATTACACAGAATGGG+CGG 0.596800 3_2:+84643867 Msa0432500:CDS
TTCTTCCACTGTGCTTACGC+CGG 0.599298 3_2:+84642596 Msa0432500:five_prime_UTR
AATCGCATGAGTCCCTTGGG+TGG 0.600840 3_2:-84646058 None:intergenic
TGATATATCAAGATGTGCAT+CGG 0.601858 3_2:+84646969 Msa0432500:three_prime_UTR
CAGCTAATGATAAGCCCGAA+TGG 0.603033 3_2:-84647224 None:intergenic
GTTTCGTGTGTTTGTACACG+TGG 0.606197 3_2:-84642513 None:intergenic
AAAGGAGAAATGTGAAGCTG+AGG 0.606470 3_2:+84648652 Msa0432500:three_prime_UTR
AGAGCTAGAAGCAAAATCCA+AGG 0.606575 3_2:+84648547 Msa0432500:three_prime_UTR
TGATACTCCATACGATGCAT+CGG 0.607028 3_2:+84647281 Msa0432500:three_prime_UTR
TGAGAGCATGCCTTGTAACA+CGG 0.610568 3_2:-84649559 None:intergenic
ACGGGGAAGGACAGAAGTAA+TGG 0.612467 3_2:+84647516 Msa0432500:three_prime_UTR
GATGAAGGAGGAATCTATGC+CGG 0.615324 3_2:-84642615 None:intergenic
GAGCTAGAAGCAAAATCCAA+GGG 0.616666 3_2:+84648548 Msa0432500:three_prime_UTR
TGATCTTCCTTACGAAGATG+AGG 0.618623 3_2:+84649152 Msa0432500:three_prime_UTR
TAAGAGTTGAAGCGGTAACG+TGG 0.620400 3_2:-84642563 None:intergenic
CGAAACACGCACGACACTCA+CGG 0.626768 3_2:+84642530 Msa0432500:five_prime_UTR
TGTTGGTCAGAATTTGACAA+AGG 0.626931 3_2:+84648439 Msa0432500:three_prime_UTR
TGGCCACACAATCATCGTAC+CGG 0.627130 3_2:+84643899 Msa0432500:CDS
TGTGAACAATGTTACGGGGA+AGG 0.627354 3_2:+84647503 Msa0432500:three_prime_UTR
GGGATATGGAGGAACTTAGA+CGG 0.628005 3_2:+84648245 Msa0432500:three_prime_UTR
CAGTTCTACAGGCTTCAAGT+TGG 0.629348 3_2:+84644890 Msa0432500:intron
GCAGGCTATTCTGATTGAGA+GGG 0.632177 3_2:+84648201 Msa0432500:three_prime_UTR
TCAGGTAGAAAACCTAGAGA+AGG 0.633522 3_2:+84649406 Msa0432500:intron
TGTTAGGACTCCCAGTCCAA+AGG 0.633722 3_2:+84643259 Msa0432500:CDS
GTTGGTATACAATCACCAGA+AGG 0.635623 3_2:+84644908 Msa0432500:CDS
TTGGTATACAATCACCAGAA+GGG 0.638434 3_2:+84644909 Msa0432500:CDS
CTCCAAAGCATAGACACGAT+GGG 0.638679 3_2:+84642777 Msa0432500:CDS
AAACCGAAGCAGATCCAGGA+AGG 0.639921 3_2:-84647728 None:intergenic
AATTGACATCCTACTAGCAG+AGG 0.643598 3_2:+84649242 Msa0432500:three_prime_UTR
AGAATGGGCGGGATACCGAA+TGG 0.643780 3_2:+84643879 Msa0432500:CDS
TATATCAAGATGTGCATCGG+TGG 0.647391 3_2:+84646972 Msa0432500:three_prime_UTR
TCCTCCTTCATCGATCCGAT+CGG 0.648106 3_2:+84642626 Msa0432500:five_prime_UTR
CACACAATCATCGTACCGGT+TGG 0.650920 3_2:+84643903 Msa0432500:CDS
GCGCACGCTAAGAGTTGAAG+CGG 0.651249 3_2:-84642571 None:intergenic
CCTCCAAAGCATAGACACGA+TGG 0.653421 3_2:+84642776 Msa0432500:CDS
TCCGATCGGATCGATGAAGG+AGG 0.656474 3_2:-84642627 None:intergenic
AGGCTGAGAGAAAAGCTCCA+TGG 0.658284 3_2:-84647574 None:intergenic
ACTTCTAGGTAATAATACCA+TGG 0.661220 3_2:+84647557 Msa0432500:three_prime_UTR
CAACCGGTACGATGATTGTG+TGG 0.666909 3_2:-84643902 None:intergenic
GGACTCCAATCCATGCCAAG+AGG 0.690067 3_2:-84642812 None:intergenic
GAAAACCTAGAGAAGGACAC+CGG 0.699203 3_2:+84649413 Msa0432500:three_prime_UTR
GACATGTGAACAATGTTACG+GGG 0.707256 3_2:+84647499 Msa0432500:three_prime_UTR
ATAAAAGATGGTGTAATCTG+TGG 0.709015 3_2:+84649470 Msa0432500:three_prime_UTR
CTATGCCGGCGTAAGCACAG+TGG 0.709743 3_2:-84642601 None:intergenic
AGTGATGGAAGCTCAATACG+AGG 0.752524 3_2:+84647651 Msa0432500:three_prime_UTR
GTACAGGTATACATACACTG+GGG 0.875797 3_2:-84649763 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTTTATTTATACATAATA+AGG - chr3_2:84646650-84646669 None:intergenic 10.0%
!! TAAAGATTATTCTAAATTAT+TGG + chr3_2:84646663-84646682 Msa0432500:intron 10.0%
!! AAAGATTATTCTAAATTATT+GGG + chr3_2:84646664-84646683 Msa0432500:intron 10.0%
!!! TTTGGTATTTTTTAAATTAG+TGG + chr3_2:84643305-84643324 Msa0432500:intron 15.0%
!! AATAATTATGAATAGAAGTT+TGG - chr3_2:84644012-84644031 None:intergenic 15.0%
!! TTACATTTAGAAATAAATGT+GGG - chr3_2:84644443-84644462 None:intergenic 15.0%
!! TTTACATTTAGAAATAAATG+TGG - chr3_2:84644444-84644463 None:intergenic 15.0%
!! TCTATATAAAAGATAAACTT+AGG + chr3_2:84644760-84644779 Msa0432500:intron 15.0%
!! AACAACATACTATAAATAAA+TGG - chr3_2:84644823-84644842 None:intergenic 15.0%
!!! TTCATTTTTAACATCATTAA+AGG + chr3_2:84644866-84644885 Msa0432500:intron 15.0%
!! TTAATTACTTTATACAAACA+TGG + chr3_2:84646188-84646207 Msa0432500:CDS 15.0%
!! ATAAATATATCTATAATCTG+TGG + chr3_2:84648046-84648065 Msa0432500:intron 15.0%
!!! ATATTTAACTTTTCTCTTTT+GGG + chr3_2:84648356-84648375 Msa0432500:intron 15.0%
!!! TGACATATATTGTATTTTTT+GGG + chr3_2:84648758-84648777 Msa0432500:intron 15.0%
!! TAATCAAAATTTGCAATTGA+CGG - chr3_2:84642675-84642694 None:intergenic 20.0%
!!! GATTTCAATTTTGATTGATA+TGG + chr3_2:84642967-84642986 Msa0432500:intron 20.0%
!! CAAAATTAAAGGAGAAAAAA+GGG - chr3_2:84643754-84643773 None:intergenic 20.0%
!! ACAAAATTAAAGGAGAAAAA+AGG - chr3_2:84643755-84643774 None:intergenic 20.0%
!! ATATTTATCTTCAATCTTCA+TGG + chr3_2:84643777-84643796 Msa0432500:intron 20.0%
!! ATTTCTAAATGTAAAAGAGA+TGG + chr3_2:84644449-84644468 Msa0432500:intron 20.0%
!! ATATAAAAGATAAACTTAGG+TGG + chr3_2:84644763-84644782 Msa0432500:intron 20.0%
!!! AATAAATTTAAATGGCTTTG+TGG - chr3_2:84645181-84645200 None:intergenic 20.0%
!!! TCATCCTACATAAATTTTAA+AGG - chr3_2:84645337-84645356 None:intergenic 20.0%
!! ACTTATACTTTGTCTATTAA+AGG + chr3_2:84645397-84645416 Msa0432500:intron 20.0%
!! CATTCTATTCATTAATCATA+AGG - chr3_2:84645672-84645691 None:intergenic 20.0%
!! CTTATGATTAATGAATAGAA+TGG + chr3_2:84645670-84645689 Msa0432500:intron 20.0%
!!! TCTCAATATTTTTTGTAATG+AGG + chr3_2:84646695-84646714 Msa0432500:intron 20.0%
!!! TCTTGTATGTGATTTTTTTT+TGG + chr3_2:84647027-84647046 Msa0432500:intron 20.0%
!! CTTGATTTAATCTAACTATA+AGG - chr3_2:84647902-84647921 None:intergenic 20.0%
!!! GATATTTAACTTTTCTCTTT+TGG + chr3_2:84648355-84648374 Msa0432500:intron 20.0%
!!! TATTTAACTTTTCTCTTTTG+GGG + chr3_2:84648357-84648376 Msa0432500:intron 20.0%
!!! GTGACATATATTGTATTTTT+TGG + chr3_2:84648757-84648776 Msa0432500:intron 20.0%
!! AAATTCAAAATAAGAAAGGA+AGG - chr3_2:84648810-84648829 None:intergenic 20.0%
!! CAACAAATTCAAAATAAGAA+AGG - chr3_2:84648814-84648833 None:intergenic 20.0%
!!! ATTTTGAATTTGTTGTGTTA+TGG + chr3_2:84648819-84648838 Msa0432500:intron 20.0%
!!! TTTTGAATTTGTTGTGTTAT+GGG + chr3_2:84648820-84648839 Msa0432500:intron 20.0%
!!! ATTAAGCTTAGATTTTCAAA+TGG + chr3_2:84648920-84648939 Msa0432500:intron 20.0%
!!! TTAAGCTTAGATTTTCAAAT+GGG + chr3_2:84648921-84648940 Msa0432500:intron 20.0%
!!! TTTGTTACATTTTCAATAGA+AGG - chr3_2:84649614-84649633 None:intergenic 20.0%
!!! TTTGCTTTTAAACTTTTACG+CGG + chr3_2:84643085-84643104 Msa0432500:intron 25.0%
! AAAATCTGTGAATTTACCTT+TGG - chr3_2:84643278-84643297 None:intergenic 25.0%
!! TCATATCTTTAAGAAAGCAA+CGG + chr3_2:84643440-84643459 Msa0432500:intron 25.0%
!! ATGTCAAAGTTTTTCATCTT+TGG - chr3_2:84643532-84643551 None:intergenic 25.0%
! AAATCTAAGCGTAGATAATA+AGG + chr3_2:84643587-84643606 Msa0432500:intron 25.0%
! ATCTCAAAAGAACAAAACAT+TGG + chr3_2:84643682-84643701 Msa0432500:intron 25.0%
! TTCAAATGATGTGTTTATCT+AGG - chr3_2:84643803-84643822 None:intergenic 25.0%
! ATTGCATTATAATACCTTCT+TGG + chr3_2:84643930-84643949 Msa0432500:CDS 25.0%
! TTGCATTATAATACCTTCTT+GGG + chr3_2:84643931-84643950 Msa0432500:CDS 25.0%
! TAGATACTACGGTTATTATT+AGG - chr3_2:84644152-84644171 None:intergenic 25.0%
! TAACTACTTTAACTATACAG+AGG + chr3_2:84644242-84644261 Msa0432500:intron 25.0%
!! TTTAACTATACAGAGGTATA+TGG + chr3_2:84644249-84644268 Msa0432500:intron 25.0%
! TTGACACTGTGAAATAATAT+TGG - chr3_2:84644338-84644357 None:intergenic 25.0%
!!! TTTTAATTCTGCATCATTTG+TGG + chr3_2:84644363-84644382 Msa0432500:intron 25.0%
!!! TACTATAAATAAATGGACTG+TGG - chr3_2:84644816-84644835 None:intergenic 25.0%
!!! ATTTTCATGTATTTCTACTC+TGG + chr3_2:84645035-84645054 Msa0432500:intron 25.0%
! CTAATGGTTAAAAACACTAA+TGG - chr3_2:84645147-84645166 None:intergenic 25.0%
! TGTGGTTGAAAATAAACTAA+TGG - chr3_2:84645163-84645182 None:intergenic 25.0%
!!! AATTTTAAAGGCAGTAGAAA+TGG - chr3_2:84645325-84645344 None:intergenic 25.0%
!!! ACTGCCTTTAAAATTTATGT+AGG + chr3_2:84645330-84645349 Msa0432500:intron 25.0%
! TAGTTTACCAAAATGGTATA+AGG - chr3_2:84645371-84645390 None:intergenic 25.0%
! TTAAAGGATTAAACCTTCTT+TGG + chr3_2:84645413-84645432 Msa0432500:intron 25.0%
!! AACTACATTGATACTGTTTT+TGG - chr3_2:84645532-84645551 None:intergenic 25.0%
! TAGTTTAGAAGTTTCAAAAC+AGG + chr3_2:84645547-84645566 Msa0432500:intron 25.0%
!! ACAGGAAATCTTTAGAAAAT+TGG + chr3_2:84645565-84645584 Msa0432500:intron 25.0%
! AGAAACCAATATTAACTTTG+AGG + chr3_2:84645606-84645625 Msa0432500:intron 25.0%
! TCAAGTATTTATTAGTTCCA+AGG + chr3_2:84645799-84645818 Msa0432500:intron 25.0%
! TTATCTATCTCTATCATACA+GGG - chr3_2:84645925-84645944 None:intergenic 25.0%
! TTTATCTATCTCTATCATAC+AGG - chr3_2:84645926-84645945 None:intergenic 25.0%
! AGTAATTAAATTCAAGCAAG+AGG - chr3_2:84646177-84646196 None:intergenic 25.0%
! TTACTAGCATGTTGAAAATT+AGG + chr3_2:84646234-84646253 Msa0432500:exon 25.0%
!! AAATCTAAAACAGAGATATG+AGG - chr3_2:84646275-84646294 None:intergenic 25.0%
! GGGAGATGTTAAATAATATT+TGG - chr3_2:84646321-84646340 None:intergenic 25.0%
! GAAAATTACAAGTTACTGAA+AGG - chr3_2:84646475-84646494 None:intergenic 25.0%
! TGAAAACAATTACAAGTTCT+AGG - chr3_2:84646510-84646529 None:intergenic 25.0%
! TATACATAATAAGGAGAACA+TGG - chr3_2:84646641-84646660 None:intergenic 25.0%
! ATGAGGTTCTTATTATTCTT+AGG + chr3_2:84646712-84646731 Msa0432500:intron 25.0%
! GTTCTTATTATTCTTAGGTA+AGG + chr3_2:84646717-84646736 Msa0432500:intron 25.0%
!! ACTAATATACATGAGTTGAA+TGG + chr3_2:84646862-84646881 Msa0432500:intron 25.0%
!! CTAATATACATGAGTTGAAT+GGG + chr3_2:84646863-84646882 Msa0432500:intron 25.0%
!! TATTTTACAAGCTTCTCTAT+TGG - chr3_2:84647390-84647409 None:intergenic 25.0%
! ATAGAGAAGCTTGTAAAATA+TGG + chr3_2:84647390-84647409 Msa0432500:three_prime_UTR 25.0%
!! TTGATTTTTATAGAAGTGAC+TGG + chr3_2:84648109-84648128 Msa0432500:intron 25.0%
! AACTACCAAGCAAAAAAATA+AGG + chr3_2:84648168-84648187 Msa0432500:three_prime_UTR 25.0%
! AAAGATTTACTCAAATGCAA+TGG + chr3_2:84648224-84648243 Msa0432500:three_prime_UTR 25.0%
! AAGATTTACTCAAATGCAAT+GGG + chr3_2:84648225-84648244 Msa0432500:three_prime_UTR 25.0%
!!! CTTATCGTTGATTTCAAAAA+TGG + chr3_2:84648381-84648400 Msa0432500:intron 25.0%
!! GAAATTTTGTCAAAACAGTA+TGG + chr3_2:84648524-84648543 Msa0432500:three_prime_UTR 25.0%
!! TATTAAAGTTCTGGTTAAAG+AGG + chr3_2:84648574-84648593 Msa0432500:three_prime_UTR 25.0%
!! ATTTTGTATTATCTGTCAAG+AGG - chr3_2:84648712-84648731 None:intergenic 25.0%
!!! ATATTGTATTTTTTGGGTTC+TGG + chr3_2:84648764-84648783 Msa0432500:intron 25.0%
! TTGATTGAAGTTCAGAAATA+AGG - chr3_2:84648963-84648982 None:intergenic 25.0%
!!! TACAAGTTATCATTTTTCTG+TGG + chr3_2:84649265-84649284 Msa0432500:intron 25.0%
! CAAGTTCTGTAAATATAGAA+GGG - chr3_2:84649375-84649394 None:intergenic 25.0%
! ACAAGTTCTGTAAATATAGA+AGG - chr3_2:84649376-84649395 None:intergenic 25.0%
!! GAACTTGTTTAAATTTGTTC+AGG + chr3_2:84649388-84649407 Msa0432500:intron 25.0%
! AAAACCAATGACATAAAAGA+TGG + chr3_2:84649458-84649477 Msa0432500:three_prime_UTR 25.0%
! TGCAAAATAATTATTCGTAC+AGG - chr3_2:84649782-84649801 None:intergenic 25.0%
TCACTCTATCTTTCTACAAT+TGG - chr3_2:84642720-84642739 None:intergenic 30.0%
!!! ATCGATGTTTTTTGAAGTTG+AGG + chr3_2:84643113-84643132 Msa0432500:intron 30.0%
!!! TGTTTTTTGAAGTTGAGGAT+TGG + chr3_2:84643118-84643137 Msa0432500:intron 30.0%
!!! ATTTTTAGTCAGTCAGTACT+GGG + chr3_2:84643234-84643253 Msa0432500:intron 30.0%
!! TCACAGATTTTTAACTCGTT+TGG + chr3_2:84643287-84643306 Msa0432500:intron 30.0%
TTAGTGGAAAATGAAGTTTG+AGG + chr3_2:84643321-84643340 Msa0432500:intron 30.0%
! TAACTTTCACTGTTTTCACT+GGG - chr3_2:84643499-84643518 None:intergenic 30.0%
! ATAACTTTCACTGTTTTCAC+TGG - chr3_2:84643500-84643519 None:intergenic 30.0%
TCATCAAAGCTAACTAAGAA+GGG - chr3_2:84643649-84643668 None:intergenic 30.0%
!! TTCTTAGTTAGCTTTGATGA+CGG + chr3_2:84643649-84643668 Msa0432500:intron 30.0%
TATAATGCAATAACTCCAAC+CGG - chr3_2:84643921-84643940 None:intergenic 30.0%
!! GGATCTGAATTCTTTGATTT+TGG - chr3_2:84643965-84643984 None:intergenic 30.0%
AAAGAATTCAGATCCTATAG+TGG + chr3_2:84643970-84643989 Msa0432500:CDS 30.0%
TTGATCAACTTTACCACTAT+AGG - chr3_2:84643986-84644005 None:intergenic 30.0%
!! TGTAATTATCACCACTTTTC+AGG + chr3_2:84644037-84644056 Msa0432500:intron 30.0%
AGAGAGCAAAAATAACTCTA+CGG - chr3_2:84644201-84644220 None:intergenic 30.0%
AAAAAGAATAAAGCCAACCA+GGG - chr3_2:84644408-84644427 None:intergenic 30.0%
AAAAAAGAATAAAGCCAACC+AGG - chr3_2:84644409-84644428 None:intergenic 30.0%
!! AAAGAGATGGTTTTACCAAA+TGG + chr3_2:84644462-84644481 Msa0432500:intron 30.0%
!! TAGTTGTTTCTTTCTGTCAT+TGG + chr3_2:84644572-84644591 Msa0432500:intron 30.0%
CTTAGGCATTAATGATTTAC+AGG + chr3_2:84644786-84644805 Msa0432500:intron 30.0%
CCAAAATGGTATAAGGATAA+GGG - chr3_2:84645364-84645383 None:intergenic 30.0%
ACCAAAATGGTATAAGGATA+AGG - chr3_2:84645365-84645384 None:intergenic 30.0%
TGCTTCATAGTTTACCAAAA+TGG - chr3_2:84645378-84645397 None:intergenic 30.0%
AATGAGAACTCAGAGAATAA+TGG + chr3_2:84645482-84645501 Msa0432500:intron 30.0%
!! ATATTGGTTTCTTTCAGATC+TGG - chr3_2:84645598-84645617 None:intergenic 30.0%
! AACCAATATTAACTTTGAGG+CGG + chr3_2:84645609-84645628 Msa0432500:intron 30.0%
!!! TTTTGAAGCAATGCTAGATA+TGG + chr3_2:84645736-84645755 Msa0432500:intron 30.0%
! TTTGAAGCAATGCTAGATAT+GGG + chr3_2:84645737-84645756 Msa0432500:intron 30.0%
! GACTAATATTGTTTTCTCCT+TGG - chr3_2:84645819-84645838 None:intergenic 30.0%
TGGCAAAATAGTCAACTAAT+CGG - chr3_2:84645983-84646002 None:intergenic 30.0%
AGCTTAAAAAGGAATTTCCA+AGG + chr3_2:84646017-84646036 Msa0432500:intron 30.0%
AATACCAATTGTTGCATGTT+TGG + chr3_2:84646131-84646150 Msa0432500:CDS 30.0%
ATACCAATTGTTGCATGTTT+GGG + chr3_2:84646132-84646151 Msa0432500:CDS 30.0%
ATCTTGTGGTTAGGTTAAAA+AGG - chr3_2:84646572-84646591 None:intergenic 30.0%
ACTCATGTATATTAGTGTAC+AGG - chr3_2:84646858-84646877 None:intergenic 30.0%
ATCAATGTCAGACAATAGTT+TGG - chr3_2:84646953-84646972 None:intergenic 30.0%
TGATATATCAAGATGTGCAT+CGG + chr3_2:84646969-84646988 Msa0432500:three_prime_UTR 30.0%
! TTCCAATAACACGGATTATT+CGG + chr3_2:84647188-84647207 Msa0432500:three_prime_UTR 30.0%
TGGCATATCAAATATTGATG+AGG + chr3_2:84647410-84647429 Msa0432500:three_prime_UTR 30.0%
GGCATATCAAATATTGATGA+GGG + chr3_2:84647411-84647430 Msa0432500:three_prime_UTR 30.0%
! TATTGATGAGGGTTTGTTTA+TGG + chr3_2:84647422-84647441 Msa0432500:three_prime_UTR 30.0%
! ATTGATGAGGGTTTGTTTAT+GGG + chr3_2:84647423-84647442 Msa0432500:three_prime_UTR 30.0%
!! ACTATTCTAGAGCAATTAGA+AGG + chr3_2:84647450-84647469 Msa0432500:three_prime_UTR 30.0%
TCATATGATTCTTCACTTCT+AGG + chr3_2:84647543-84647562 Msa0432500:three_prime_UTR 30.0%
ACTTCTAGGTAATAATACCA+TGG + chr3_2:84647557-84647576 Msa0432500:three_prime_UTR 30.0%
! AAGCTTTCAAATGAAAGTGT+TGG + chr3_2:84647627-84647646 Msa0432500:three_prime_UTR 30.0%
! GTAGTGACATGTCTAATTTT+GGG + chr3_2:84647673-84647692 Msa0432500:three_prime_UTR 30.0%
TTCAAGAGAAACAGATATTG+TGG + chr3_2:84647749-84647768 Msa0432500:three_prime_UTR 30.0%
TCAAGAGAAACAGATATTGT+GGG + chr3_2:84647750-84647769 Msa0432500:three_prime_UTR 30.0%
! CAGAACTTTTCAATTTTGTG+TGG - chr3_2:84647776-84647795 None:intergenic 30.0%
CACACAAAATTGAAAAGTTC+TGG + chr3_2:84647774-84647793 Msa0432500:three_prime_UTR 30.0%
AAATCAAGAAATAGCTGCAA+AGG + chr3_2:84647914-84647933 Msa0432500:three_prime_UTR 30.0%
! AAAGGATTTTCTTACGACAA+AGG + chr3_2:84647932-84647951 Msa0432500:three_prime_UTR 30.0%
! AGTTTTCTTGTACCTGAAAT+TGG + chr3_2:84648005-84648024 Msa0432500:intron 30.0%
TTTATTTATTCAGTAGCCTC+TGG - chr3_2:84648031-84648050 None:intergenic 30.0%
!!! GTTCTCCTTATTTTTTTGCT+TGG - chr3_2:84648176-84648195 None:intergenic 30.0%
GATGAAACTTAAGTCTGAAT+CGG + chr3_2:84648285-84648304 Msa0432500:three_prime_UTR 30.0%
ACTGTTATACATATGATACC+AGG + chr3_2:84648409-84648428 Msa0432500:intron 30.0%
TTATACATATGATACCAGGA+TGG + chr3_2:84648413-84648432 Msa0432500:intron 30.0%
TTCCTTCTTCAATTCTGTTT+GGG - chr3_2:84648618-84648637 None:intergenic 30.0%
!! ACATACAGAAAAGCTTTGAA+AGG - chr3_2:84648863-84648882 None:intergenic 30.0%
! TCTCTTTGTGAAGTGTTATA+TGG + chr3_2:84648891-84648910 Msa0432500:intron 30.0%
! TTTGTGAAGTGTTATATGGA+AGG + chr3_2:84648895-84648914 Msa0432500:intron 30.0%
ACATATAAGTCATGCATTCA+GGG - chr3_2:84648993-84649012 None:intergenic 30.0%
AACATATAAGTCATGCATTC+AGG - chr3_2:84648994-84649013 None:intergenic 30.0%
! TACACCATCTTTTATGTCAT+TGG - chr3_2:84649465-84649484 None:intergenic 30.0%
ATAAAAGATGGTGTAATCTG+TGG + chr3_2:84649470-84649489 Msa0432500:three_prime_UTR 30.0%
! GATCATATCAGATTTGTTCT+TGG + chr3_2:84649508-84649527 Msa0432500:three_prime_UTR 30.0%
TGTAAAATTAACTCGCCTAT+AGG - chr3_2:84649728-84649747 None:intergenic 30.0%
ACTGGAATGGAAACAAATCA+TGG - chr3_2:84643148-84643167 None:intergenic 35.0%
CAAATCAAGACTCAGAAAAC+TGG - chr3_2:84643166-84643185 None:intergenic 35.0%
ATTACAGAGAAACACTGCAA+GGG - chr3_2:84643210-84643229 None:intergenic 35.0%
TATTACAGAGAAACACTGCA+AGG - chr3_2:84643211-84643230 None:intergenic 35.0%
!!! GATTTTTAGTCAGTCAGTAC+TGG + chr3_2:84643233-84643252 Msa0432500:intron 35.0%
TGTGAATTTACCTTTGGACT+GGG - chr3_2:84643272-84643291 None:intergenic 35.0%
!! AAGCAACGGCATTTTGATAA+TGG + chr3_2:84643454-84643473 Msa0432500:intron 35.0%
TAGATAATAAGGCTTCACAC+AGG + chr3_2:84643598-84643617 Msa0432500:intron 35.0%
! ACACAGGCATTTGCTTTAAA+GGG + chr3_2:84643614-84643633 Msa0432500:intron 35.0%
ATCAAAGCTAACTAAGAAGG+GGG - chr3_2:84643647-84643666 None:intergenic 35.0%
CATCAAAGCTAACTAAGAAG+GGG - chr3_2:84643648-84643667 None:intergenic 35.0%
GTCATCAAAGCTAACTAAGA+AGG - chr3_2:84643650-84643669 None:intergenic 35.0%
AAGGGAGGATAAATAAGCTT+AGG - chr3_2:84643848-84643867 None:intergenic 35.0%
CCATTCTGTGTAATTGGAAA+GGG - chr3_2:84643866-84643885 None:intergenic 35.0%
CCTTTCCAATTACACAGAAT+GGG + chr3_2:84643864-84643883 Msa0432500:CDS 35.0%
!!! TTATCACCACTTTTCAGGTT+TGG + chr3_2:84644042-84644061 Msa0432500:intron 35.0%
!!! TATCACCACTTTTCAGGTTT+GGG + chr3_2:84644043-84644062 Msa0432500:intron 35.0%
!!! TTTTCAGGTTTGGGTTTGTT+AGG + chr3_2:84644052-84644071 Msa0432500:intron 35.0%
TCAGCAGCATATAGATACTA+CGG - chr3_2:84644163-84644182 None:intergenic 35.0%
ACGACAAGACTTTCCTATAA+AGG + chr3_2:84644286-84644305 Msa0432500:intron 35.0%
CAATGAAAAATATGCCTGCA+GGG - chr3_2:84644312-84644331 None:intergenic 35.0%
ACAATGAAAAATATGCCTGC+AGG - chr3_2:84644313-84644332 None:intergenic 35.0%
TTCTGCATCATTTGTGGTTA+TGG + chr3_2:84644369-84644388 Msa0432500:intron 35.0%
GACTGGAATAGAGTATAATG+TGG - chr3_2:84644539-84644558 None:intergenic 35.0%
CGAACACTGTATATAGCATT+TGG - chr3_2:84644639-84644658 None:intergenic 35.0%
ATACAGTGTTCGATAGTTAC+AGG + chr3_2:84644647-84644666 Msa0432500:intron 35.0%
AAGATAAACTTAGGTGGCTT+AGG + chr3_2:84644769-84644788 Msa0432500:intron 35.0%
TCATTAAAGGACAGTTCTAC+AGG + chr3_2:84644879-84644898 Msa0432500:intron 35.0%
TTGGTATACAATCACCAGAA+GGG + chr3_2:84644909-84644928 Msa0432500:CDS 35.0%
TGGATATTTGTAATCCCTTC+TGG - chr3_2:84644926-84644945 None:intergenic 35.0%
GAAGGGATTACAAATATCCA+TGG + chr3_2:84644926-84644945 Msa0432500:CDS 35.0%
! ATATCCATGGAGTACTAAGA+AGG + chr3_2:84644939-84644958 Msa0432500:CDS 35.0%
GTAGTCAGAAATCAGAATCA+CGG - chr3_2:84645061-84645080 None:intergenic 35.0%
! TTCACATTCTGAGAGAGTAT+CGG - chr3_2:84645266-84645285 None:intergenic 35.0%
CAGAATGTGAAGACAAATCA+TGG + chr3_2:84645275-84645294 Msa0432500:intron 35.0%
AATGTGAAGACAAATCATGG+TGG + chr3_2:84645278-84645297 Msa0432500:intron 35.0%
! CCCTTATCCTTATACCATTT+TGG + chr3_2:84645361-84645380 Msa0432500:intron 35.0%
! GTTTCTTTCAGATCTGGTTT+AGG - chr3_2:84645592-84645611 None:intergenic 35.0%
TTCCGCCTCAAAGTTAATAT+TGG - chr3_2:84645614-84645633 None:intergenic 35.0%
AGCATTGCTTCAAAAAATGC+CGG - chr3_2:84645731-84645750 None:intergenic 35.0%
! TTATATTTTCTCGCAGCAGA+AGG - chr3_2:84645773-84645792 None:intergenic 35.0%
GCTGTCTATGTAGCTTAAAA+AGG + chr3_2:84646006-84646025 Msa0432500:intron 35.0%
AATCCCAAACATGCAACAAT+TGG - chr3_2:84646138-84646157 None:intergenic 35.0%
! TTGTTGCATGTTTGGGATTA+TGG + chr3_2:84646139-84646158 Msa0432500:CDS 35.0%
AACCAGAGAAAGTTACTGAA+AGG - chr3_2:84646539-84646558 None:intergenic 35.0%
! ACAAGATCCACCATGTTTTT+GGG + chr3_2:84646585-84646604 Msa0432500:intron 35.0%
TTTCAATGTCCCCAAAAACA+TGG - chr3_2:84646598-84646617 None:intergenic 35.0%
! ATTTTGTACAACGTGACAAG+TGG + chr3_2:84646801-84646820 Msa0432500:intron 35.0%
AATCTGACTGTGATGTTAGA+TGG - chr3_2:84646829-84646848 None:intergenic 35.0%
CATGTATATTAGTGTACAGG+TGG - chr3_2:84646855-84646874 None:intergenic 35.0%
! ATATACATGAGTTGAATGGG+TGG + chr3_2:84646866-84646885 Msa0432500:intron 35.0%
!! GTTTACTTTTGCTACAGAGA+AGG + chr3_2:84646905-84646924 Msa0432500:intron 35.0%
!! AGTTTCTAGCTCAAGAAATG+AGG - chr3_2:84646998-84647017 None:intergenic 35.0%
! TAATCCGTGTTATTGGAATC+AGG - chr3_2:84647186-84647205 None:intergenic 35.0%
TTATCATCCTGTCCAATTCT+TGG - chr3_2:84647318-84647337 None:intergenic 35.0%
!! CAGGATGATAATTCTGAAGT+TGG + chr3_2:84647327-84647346 Msa0432500:three_prime_UTR 35.0%
CAGACATGTGAACAATGTTA+CGG + chr3_2:84647497-84647516 Msa0432500:three_prime_UTR 35.0%
AGACATGTGAACAATGTTAC+GGG + chr3_2:84647498-84647517 Msa0432500:three_prime_UTR 35.0%
!! AATGAAAGTGTTGGAAGTGA+TGG + chr3_2:84647636-84647655 Msa0432500:three_prime_UTR 35.0%
! GGTAGTGACATGTCTAATTT+TGG + chr3_2:84647672-84647691 Msa0432500:three_prime_UTR 35.0%
! TTTGGGATTCCAAATTCATC+TGG + chr3_2:84647690-84647709 Msa0432500:three_prime_UTR 35.0%
ATTCCAAATTCATCTGGTGA+TGG + chr3_2:84647696-84647715 Msa0432500:three_prime_UTR 35.0%
! AGTTTATTGCGTTGATCTAG+CGG - chr3_2:84647819-84647838 None:intergenic 35.0%
ATCAACGCAATAAACTGAAC+AGG + chr3_2:84647823-84647842 Msa0432500:three_prime_UTR 35.0%
AGTCACTGCAAAAACTGATA+TGG + chr3_2:84647872-84647891 Msa0432500:three_prime_UTR 35.0%
GTTGTGGAACATAAAGAATC+TGG - chr3_2:84648075-84648094 None:intergenic 35.0%
! AAAGCTTTGTATGCAAGTTG+TGG - chr3_2:84648091-84648110 None:intergenic 35.0%
TACTCAAATGCAATGGGATA+TGG + chr3_2:84648231-84648250 Msa0432500:three_prime_UTR 35.0%
TGTTGGTCAGAATTTGACAA+AGG + chr3_2:84648439-84648458 Msa0432500:three_prime_UTR 35.0%
CAGAACTTTAATATCTCCCT+TGG - chr3_2:84648567-84648586 None:intergenic 35.0%
CAAGGGAGATATTAAAGTTC+TGG + chr3_2:84648565-84648584 Msa0432500:three_prime_UTR 35.0%
TCAATTCTGTTTGGGAACTA+CGG - chr3_2:84648610-84648629 None:intergenic 35.0%
TTCCCAAACAGAATTGAAGA+AGG + chr3_2:84648613-84648632 Msa0432500:three_prime_UTR 35.0%
GTTCCTTCTTCAATTCTGTT+TGG - chr3_2:84648619-84648638 None:intergenic 35.0%
AGCTTCACATTTCTCCTTTA+TGG - chr3_2:84648651-84648670 None:intergenic 35.0%
!! CAGAAAAGCTTTGAAAGGAA+GGG - chr3_2:84648858-84648877 None:intergenic 35.0%
!! ACAGAAAAGCTTTGAAAGGA+AGG - chr3_2:84648859-84648878 None:intergenic 35.0%
ATACACGAGAAACACAAACA+TGG - chr3_2:84649021-84649040 None:intergenic 35.0%
TGAAAGAGAAAAGAGTGAAC+AGG + chr3_2:84649059-84649078 Msa0432500:three_prime_UTR 35.0%
AGAAAACAGCTTGAGAAATG+TGG + chr3_2:84649096-84649115 Msa0432500:three_prime_UTR 35.0%
GAAAACAGCTTGAGAAATGT+GGG + chr3_2:84649097-84649116 Msa0432500:three_prime_UTR 35.0%
TGTACACGTGGCTTCTTTAA+TGG - chr3_2:84642504-84642523 None:intergenic 40.0%
AAATTTGCAATTGACGGCAC+CGG - chr3_2:84642669-84642688 None:intergenic 40.0%
! ACAACGATTACCCATTTTCG+AGG - chr3_2:84642842-84642861 None:intergenic 40.0%
! GCTTTTAAACTTTTACGCGG+TGG + chr3_2:84643088-84643107 Msa0432500:intron 40.0%
CAAGACTCAGAAAACTGGAA+TGG - chr3_2:84643161-84643180 None:intergenic 40.0%
!! CTGAGTCTTGATTTGCTTTG+TGG + chr3_2:84643171-84643190 Msa0432500:intron 40.0%
CTGTGAATTTACCTTTGGAC+TGG - chr3_2:84643273-84643292 None:intergenic 40.0%
!! TTGCAATTTGCTTTGGAACG+CGG - chr3_2:84643394-84643413 None:intergenic 40.0%
! GCTTGGATTGCAATTTGCTT+TGG - chr3_2:84643401-84643420 None:intergenic 40.0%
ATATGATTCAACCTCGACCA+TGG - chr3_2:84643426-84643445 None:intergenic 40.0%
CACACAGGCATTTGCTTTAA+AGG + chr3_2:84643613-84643632 Msa0432500:intron 40.0%
TTCTGTGTAATTGGAAAGGG+AGG - chr3_2:84643863-84643882 None:intergenic 40.0%
CCCTTTCCAATTACACAGAA+TGG + chr3_2:84643863-84643882 Msa0432500:CDS 40.0%
CCCATTCTGTGTAATTGGAA+AGG - chr3_2:84643867-84643886 None:intergenic 40.0%
TTCCAATTACACAGAATGGG+CGG + chr3_2:84643867-84643886 Msa0432500:CDS 40.0%
ACAAACCCAAACCTGAAAAG+TGG - chr3_2:84644051-84644070 None:intergenic 40.0%
ATGGTTGTGTTATGAATCCC+TGG + chr3_2:84644388-84644407 Msa0432500:intron 40.0%
TTGTGTTATGAATCCCTGGT+TGG + chr3_2:84644392-84644411 Msa0432500:intron 40.0%
ACTACTAGAAGCAGATTGAC+TGG - chr3_2:84644556-84644575 None:intergenic 40.0%
GTAAAGTCAAGTGTCAAACC+AGG + chr3_2:84644708-84644727 Msa0432500:intron 40.0%
! TTTTTCACAGACATGTCTCC+TGG - chr3_2:84644729-84644748 None:intergenic 40.0%
GTTGGTATACAATCACCAGA+AGG + chr3_2:84644908-84644927 Msa0432500:CDS 40.0%
TGAACCTTCTTAGTACTCCA+TGG - chr3_2:84644946-84644965 None:intergenic 40.0%
! CAAATCATGGTGGAGTCAAT+TGG + chr3_2:84645288-84645307 Msa0432500:intron 40.0%
! ACATGCAGATTAGCCAAAGA+AGG - chr3_2:84645429-84645448 None:intergenic 40.0%
! TTTGAGGCGGAAAATAGACA+AGG + chr3_2:84645622-84645641 Msa0432500:intron 40.0%
TGTTGTGCACATGTGTTATG+AGG - chr3_2:84645696-84645715 None:intergenic 40.0%
ACATGTGCACAACAACATGA+GGG + chr3_2:84645702-84645721 Msa0432500:intron 40.0%
GCATATGTCTGTGCTTGTTT+AGG + chr3_2:84645952-84645971 Msa0432500:intron 40.0%
TAAGCTACATAGACAGCATG+TGG - chr3_2:84646003-84646022 None:intergenic 40.0%
! ATTGAAAAGCCGAGCTTTGT+TGG + chr3_2:84646078-84646097 Msa0432500:CDS 40.0%
GTAACCAATTCCATCTTGAC+TGG - chr3_2:84646349-84646368 None:intergenic 40.0%
AGCCTTTCAGTAACTTTCTC+TGG + chr3_2:84646534-84646553 Msa0432500:intron 40.0%
!! CAAAAACATGGTGGATCTTG+TGG - chr3_2:84646586-84646605 None:intergenic 40.0%
! CACAAGATCCACCATGTTTT+TGG + chr3_2:84646584-84646603 Msa0432500:intron 40.0%
!! CAAGATCCACCATGTTTTTG+GGG + chr3_2:84646586-84646605 Msa0432500:intron 40.0%
TATATCAAGATGTGCATCGG+TGG + chr3_2:84646972-84646991 Msa0432500:three_prime_UTR 40.0%
GATCGTTTACTGAATTCTGC+TGG - chr3_2:84647164-84647183 None:intergenic 40.0%
CGATCCTGATTCCAATAACA+CGG + chr3_2:84647179-84647198 Msa0432500:three_prime_UTR 40.0%
CACCGAATAATCCGTGTTAT+TGG - chr3_2:84647193-84647212 None:intergenic 40.0%
TCATCTGTTGCGTCAGATTA+TGG + chr3_2:84647255-84647274 Msa0432500:three_prime_UTR 40.0%
TGATACTCCATACGATGCAT+CGG + chr3_2:84647281-84647300 Msa0432500:three_prime_UTR 40.0%
GAAGTAGGAACTCCAAGAAT+TGG + chr3_2:84647303-84647322 Msa0432500:three_prime_UTR 40.0%
AGCAATTAGAAGGACTTCCT+AGG + chr3_2:84647460-84647479 Msa0432500:three_prime_UTR 40.0%
CGTAACATTGTTCACATGTC+TGG - chr3_2:84647499-84647518 None:intergenic 40.0%
GACATGTGAACAATGTTACG+GGG + chr3_2:84647499-84647518 Msa0432500:three_prime_UTR 40.0%
CACTGCAAAAACTGATATGG+AGG + chr3_2:84647875-84647894 Msa0432500:three_prime_UTR 40.0%
AAGGTATACCATATGCGACT+TGG + chr3_2:84647951-84647970 Msa0432500:intron 40.0%
ATCTGTTCAGGTCAAGGATT+TGG + chr3_2:84648132-84648151 Msa0432500:intron 40.0%
AAATAAGGAGAACTTGCAGC+AGG + chr3_2:84648183-84648202 Msa0432500:three_prime_UTR 40.0%
TCAAATGCAATGGGATATGG+AGG + chr3_2:84648234-84648253 Msa0432500:three_prime_UTR 40.0%
TGATACCAGGATGGAAATGT+TGG + chr3_2:84648422-84648441 Msa0432500:intron 40.0%
AGAGCTAGAAGCAAAATCCA+AGG + chr3_2:84648547-84648566 Msa0432500:three_prime_UTR 40.0%
GAGCTAGAAGCAAAATCCAA+GGG + chr3_2:84648548-84648567 Msa0432500:three_prime_UTR 40.0%
GGAACTTAGTGAGTCCATAA+AGG + chr3_2:84648634-84648653 Msa0432500:three_prime_UTR 40.0%
AAAGGAGAAATGTGAAGCTG+AGG + chr3_2:84648652-84648671 Msa0432500:three_prime_UTR 40.0%
AGTTCAGAAATAAGGCAGTG+AGG - chr3_2:84648955-84648974 None:intergenic 40.0%
TGATCTTCCTTACGAAGATG+AGG + chr3_2:84649152-84649171 Msa0432500:three_prime_UTR 40.0%
CTGCTAGTAGGATGTCAATT+TGG - chr3_2:84649242-84649261 None:intergenic 40.0%
AATTGACATCCTACTAGCAG+AGG + chr3_2:84649242-84649261 Msa0432500:three_prime_UTR 40.0%
! TAACTTGTACCTCTGCTAGT+AGG - chr3_2:84649254-84649273 None:intergenic 40.0%
TCAGGTAGAAAACCTAGAGA+AGG + chr3_2:84649406-84649425 Msa0432500:intron 40.0%
TACATTAGAAGCTGCACTTC+CGG - chr3_2:84649435-84649454 None:intergenic 40.0%
AACAGACAAACCGTGTTACA+AGG + chr3_2:84649549-84649568 Msa0432500:three_prime_UTR 40.0%
TACAAGGCATGCTCTCAAAT+TGG + chr3_2:84649565-84649584 Msa0432500:three_prime_UTR 40.0%
GATGAAAAACAGTGGAGTCA+AGG - chr3_2:84649688-84649707 None:intergenic 40.0%
!! TCCACTGTTTTTCATCCTAG+CGG + chr3_2:84649692-84649711 Msa0432500:three_prime_UTR 40.0%
GTACAGGTATACATACACTG+GGG - chr3_2:84649766-84649785 None:intergenic 40.0%
CGTACAGGTATACATACACT+GGG - chr3_2:84649767-84649786 None:intergenic 40.0%
TCGTACAGGTATACATACAC+TGG - chr3_2:84649768-84649787 None:intergenic 40.0%
GTTTCGTGTGTTTGTACACG+TGG - chr3_2:84642516-84642535 None:intergenic 45.0%
TAAGAGTTGAAGCGGTAACG+TGG - chr3_2:84642566-84642585 None:intergenic 45.0%
GATGAAGGAGGAATCTATGC+CGG - chr3_2:84642618-84642637 None:intergenic 45.0%
AAAGCTAGGGTTTCTCCGAT+CGG - chr3_2:84642644-84642663 None:intergenic 45.0%
!! GGAGAAACCCTAGCTTTTTC+CGG + chr3_2:84642647-84642666 Msa0432500:five_prime_UTR 45.0%
CTCCAAAGCATAGACACGAT+GGG + chr3_2:84642777-84642796 Msa0432500:CDS 45.0%
!! ATTACCCATTTTCGAGGTGC+AGG - chr3_2:84642836-84642855 None:intergenic 45.0%
AATTGCAATCCAAGCGACCA+TGG + chr3_2:84643406-84643425 Msa0432500:intron 45.0%
TCCAATTACACAGAATGGGC+GGG + chr3_2:84643868-84643887 Msa0432500:CDS 45.0%
ACGATGATTGTGTGGCCATT+CGG - chr3_2:84643897-84643916 None:intergenic 45.0%
! ACTTTTGTAGCACCGTCTTG+TGG + chr3_2:84644502-84644521 Msa0432500:intron 45.0%
! CTTTTGTAGCACCGTCTTGT+GGG + chr3_2:84644503-84644522 Msa0432500:intron 45.0%
! TTTTGTAGCACCGTCTTGTG+GGG + chr3_2:84644504-84644523 Msa0432500:intron 45.0%
CAGTTCTACAGGCTTCAAGT+TGG + chr3_2:84644890-84644909 Msa0432500:intron 45.0%
CACATGTGCACAACAACATG+AGG + chr3_2:84645701-84645720 Msa0432500:intron 45.0%
TTCAATCGCATGAGTCCCTT+GGG - chr3_2:84646064-84646083 None:intergenic 45.0%
TTTCAATCGCATGAGTCCCT+TGG - chr3_2:84646065-84646084 None:intergenic 45.0%
CAACCTCTTCCAACAAAGCT+CGG - chr3_2:84646090-84646109 None:intergenic 45.0%
!! GAGCTTTGTTGGAAGAGGTT+GGG + chr3_2:84646089-84646108 Msa0432500:CDS 45.0%
ATTCCATCTTGACTGGACAG+CGG - chr3_2:84646342-84646361 None:intergenic 45.0%
CTGTCCAGTCAAGATGGAAT+TGG + chr3_2:84646342-84646361 Msa0432500:intron 45.0%
!! ACATGGTGGATCTTGTGGTT+AGG - chr3_2:84646581-84646600 None:intergenic 45.0%
CAATGTCCCCAAAAACATGG+TGG - chr3_2:84646595-84646614 None:intergenic 45.0%
GGGGACATTGAAAATGTAGC+TGG + chr3_2:84646605-84646624 Msa0432500:intron 45.0%
TGCTGGCATGTGATTACATG+AGG - chr3_2:84647127-84647146 None:intergenic 45.0%
! TGGCTTGCATCTTGAAATGC+TGG - chr3_2:84647144-84647163 None:intergenic 45.0%
GGTGCAATCATCTCTCCATT+CGG + chr3_2:84647209-84647228 Msa0432500:three_prime_UTR 45.0%
GTGCAATCATCTCTCCATTC+GGG + chr3_2:84647210-84647229 Msa0432500:three_prime_UTR 45.0%
CAGCTAATGATAAGCCCGAA+TGG - chr3_2:84647227-84647246 None:intergenic 45.0%
AGGAACTCCAAGAATTGGAC+AGG + chr3_2:84647308-84647327 Msa0432500:three_prime_UTR 45.0%
TGTGAACAATGTTACGGGGA+AGG + chr3_2:84647503-84647522 Msa0432500:three_prime_UTR 45.0%
! CCTGGGCATGCTAAAGTTTT+GGG + chr3_2:84647594-84647613 Msa0432500:three_prime_UTR 45.0%
! AGTGATGGAAGCTCAATACG+AGG + chr3_2:84647651-84647670 Msa0432500:three_prime_UTR 45.0%
GAGCCATCACCAGATGAATT+TGG - chr3_2:84647702-84647721 None:intergenic 45.0%
! TATTGCGTTGATCTAGCGGA+AGG - chr3_2:84647815-84647834 None:intergenic 45.0%
TTCTTTCGACCATGCAGAGA+AGG + chr3_2:84647847-84647866 Msa0432500:three_prime_UTR 45.0%
TTGTACCTGAAATTGGCCAG+AGG + chr3_2:84648012-84648031 Msa0432500:intron 45.0%
AGAAGTGACTGGATCTGTTC+AGG + chr3_2:84648120-84648139 Msa0432500:intron 45.0%
AGCAGGCTATTCTGATTGAG+AGG + chr3_2:84648200-84648219 Msa0432500:three_prime_UTR 45.0%
GCAGGCTATTCTGATTGAGA+GGG + chr3_2:84648201-84648220 Msa0432500:three_prime_UTR 45.0%
GGGATATGGAGGAACTTAGA+CGG + chr3_2:84648245-84648264 Msa0432500:three_prime_UTR 45.0%
TAGACGGAAGTCACTGGAAA+TGG + chr3_2:84648261-84648280 Msa0432500:three_prime_UTR 45.0%
TCTGACCAACATTTCCATCC+TGG - chr3_2:84648430-84648449 None:intergenic 45.0%
GAGAAATGTGAAGCTGAGGT+AGG + chr3_2:84648656-84648675 Msa0432500:intron 45.0%
TTCCTTACGAAGATGAGGAC+AGG + chr3_2:84649157-84649176 Msa0432500:three_prime_UTR 45.0%
GAAAACCTAGAGAAGGACAC+CGG + chr3_2:84649413-84649432 Msa0432500:three_prime_UTR 45.0%
! TGAGAGCATGCCTTGTAACA+CGG - chr3_2:84649562-84649581 None:intergenic 45.0%
AGTGGAGTCAAGGTCAAAAG+TGG - chr3_2:84649678-84649697 None:intergenic 45.0%
TCCGCTAGGATGAAAAACAG+TGG - chr3_2:84649696-84649715 None:intergenic 45.0%
ATAGGATTCTCTCATCCGCT+AGG - chr3_2:84649710-84649729 None:intergenic 45.0%
AGCGGATGAGAGAATCCTAT+AGG + chr3_2:84649710-84649729 Msa0432500:three_prime_UTR 45.0%
!! ATAAATATATACAAAATTAA+AGG - chr3_2:84643765-84643784 None:intergenic 5.0%
!! AAATTAACAATAAATTTAAA+TGG - chr3_2:84645189-84645208 None:intergenic 5.0%
GCGTAAGCACAGTGGAAGAA+TGG - chr3_2:84642596-84642615 None:intergenic 50.0%
TTCTTCCACTGTGCTTACGC+CGG + chr3_2:84642596-84642615 Msa0432500:five_prime_UTR 50.0%
TCCTCCTTCATCGATCCGAT+CGG + chr3_2:84642626-84642645 Msa0432500:five_prime_UTR 50.0%
TTCTCCGATCGGATCGATGA+AGG - chr3_2:84642633-84642652 None:intergenic 50.0%
CCATCGTGTCTATGCTTTGG+AGG - chr3_2:84642779-84642798 None:intergenic 50.0%
CCTCCAAAGCATAGACACGA+TGG + chr3_2:84642776-84642795 Msa0432500:CDS 50.0%
GTCCCATCGTGTCTATGCTT+TGG - chr3_2:84642782-84642801 None:intergenic 50.0%
GAGTCCTGCACCTCGAAAAT+GGG + chr3_2:84642829-84642848 Msa0432500:CDS 50.0%
! CAGTCAGTACTGGGCATGTT+AGG + chr3_2:84643243-84643262 Msa0432500:CDS 50.0%
TGTTAGGACTCCCAGTCCAA+AGG + chr3_2:84643259-84643278 Msa0432500:CDS 50.0%
GGTACATGTACGCAGTTCTC+TGG - chr3_2:84643373-84643392 None:intergenic 50.0%
TCTGCGTGTGCATCAGTTAG+AGG + chr3_2:84643555-84643574 Msa0432500:intron 50.0%
TCCCGCCCATTCTGTGTAAT+TGG - chr3_2:84643872-84643891 None:intergenic 50.0%
TGGCCACACAATCATCGTAC+CGG + chr3_2:84643899-84643918 Msa0432500:CDS 50.0%
CAACCGGTACGATGATTGTG+TGG - chr3_2:84643905-84643924 None:intergenic 50.0%
! CACACAATCATCGTACCGGT+TGG + chr3_2:84643903-84643922 Msa0432500:CDS 50.0%
TTTGGCACGAAGACCCAAGA+AGG - chr3_2:84643947-84643966 None:intergenic 50.0%
CTTTCCTATAAAGGCCCTGC+AGG + chr3_2:84644295-84644314 Msa0432500:intron 50.0%
TATGCCTGCAGGGCCTTTAT+AGG - chr3_2:84644302-84644321 None:intergenic 50.0%
TACCAAATGGTCGATCCTGC+TGG + chr3_2:84644475-84644494 Msa0432500:intron 50.0%
ACCAAATGGTCGATCCTGCT+GGG + chr3_2:84644476-84644495 Msa0432500:intron 50.0%
GCTACAAAAGTGAACCCAGC+AGG - chr3_2:84644493-84644512 None:intergenic 50.0%
TCTCTGTGTGCGTGTATGTG+AGG - chr3_2:84645107-84645126 None:intergenic 50.0%
CACAACAACATGAGGGAAGC+CGG + chr3_2:84645709-84645728 Msa0432500:intron 50.0%
TACAGGGCACACATGCACAT+AGG - chr3_2:84645909-84645928 None:intergenic 50.0%
!! AAGCCGAGCTTTGTTGGAAG+AGG + chr3_2:84646084-84646103 Msa0432500:CDS 50.0%
!! CGAGCTTTGTTGGAAGAGGT+TGG + chr3_2:84646088-84646107 Msa0432500:CDS 50.0%
TTCCATCTTGACTGGACAGC+GGG - chr3_2:84646341-84646360 None:intergenic 50.0%
GCACAAGCACAAGCACAAGA+AGG - chr3_2:84646420-84646439 None:intergenic 50.0%
TCGGGCTTATCATTAGCTGC+TGG + chr3_2:84647228-84647247 Msa0432500:three_prime_UTR 50.0%
CCTACTTCCGATGCATCGTA+TGG - chr3_2:84647291-84647310 None:intergenic 50.0%
CCATACGATGCATCGGAAGT+AGG + chr3_2:84647288-84647307 Msa0432500:three_prime_UTR 50.0%
ACGGGGAAGGACAGAAGTAA+TGG + chr3_2:84647516-84647535 Msa0432500:three_prime_UTR 50.0%
AGGCTGAGAGAAAAGCTCCA+TGG - chr3_2:84647577-84647596 None:intergenic 50.0%
! ATGGAGCTTTTCTCTCAGCC+TGG + chr3_2:84647576-84647595 Msa0432500:three_prime_UTR 50.0%
! TGGAGCTTTTCTCTCAGCCT+GGG + chr3_2:84647577-84647596 Msa0432500:three_prime_UTR 50.0%
! GCCTGGGCATGCTAAAGTTT+TGG + chr3_2:84647593-84647612 Msa0432500:three_prime_UTR 50.0%
CCCAAAACTTTAGCATGCCC+AGG - chr3_2:84647597-84647616 None:intergenic 50.0%
AAACCGAAGCAGATCCAGGA+AGG - chr3_2:84647731-84647750 None:intergenic 50.0%
CTTGAAACCGAAGCAGATCC+AGG - chr3_2:84647735-84647754 None:intergenic 50.0%
!! AGTGACTAGCCTTCTCTGCA+TGG - chr3_2:84647859-84647878 None:intergenic 50.0%
AGTAGCCTCTGGCCAATTTC+AGG - chr3_2:84648020-84648039 None:intergenic 50.0%
GACTGGATCTGTTCAGGTCA+AGG + chr3_2:84648126-84648145 Msa0432500:intron 50.0%
GGAACTTAGACGGAAGTCAC+TGG + chr3_2:84648255-84648274 Msa0432500:three_prime_UTR 50.0%
GTGAACAGGCAGAAACTGCT+TGG + chr3_2:84649073-84649092 Msa0432500:three_prime_UTR 50.0%
GTCCTGTCCTCATCTTCGTA+AGG - chr3_2:84649162-84649181 None:intergenic 50.0%
TTACTGCTCGACTCTACAGC+TGG - chr3_2:84649304-84649323 None:intergenic 50.0%
CGAAACACGCACGACACTCA+CGG + chr3_2:84642530-84642549 Msa0432500:five_prime_UTR 55.0%
GCGCACGCTAAGAGTTGAAG+CGG - chr3_2:84642574-84642593 None:intergenic 55.0%
TCCGATCGGATCGATGAAGG+AGG - chr3_2:84642630-84642649 None:intergenic 55.0%
! GACGGCACCGGAAAAAGCTA+GGG - chr3_2:84642657-84642676 None:intergenic 55.0%
! TGACGGCACCGGAAAAAGCT+AGG - chr3_2:84642658-84642677 None:intergenic 55.0%
CAATCCATGCCAAGAGGCAG+TGG - chr3_2:84642809-84642828 None:intergenic 55.0%
CACTGCCTCTTGGCATGGAT+TGG + chr3_2:84642807-84642826 Msa0432500:CDS 55.0%
GGACTCCAATCCATGCCAAG+AGG - chr3_2:84642815-84642834 None:intergenic 55.0%
GGAGTCCTGCACCTCGAAAA+TGG + chr3_2:84642828-84642847 Msa0432500:CDS 55.0%
AATCCAAGCGACCATGGTCG+AGG + chr3_2:84643412-84643431 Msa0432500:intron 55.0%
AGAATGGGCGGGATACCGAA+TGG + chr3_2:84643879-84643898 Msa0432500:CDS 55.0%
ACCCAGCAGGATCGACCATT+TGG - chr3_2:84644480-84644499 None:intergenic 55.0%
GTGACAAGTGCCCCACAAGA+CGG - chr3_2:84644517-84644536 None:intergenic 55.0%
GCTGGAGGGATGTTTCTCCT+TGG - chr3_2:84646037-84646056 None:intergenic 55.0%
AATCGCATGAGTCCCTTGGG+TGG - chr3_2:84646061-84646080 None:intergenic 55.0%
!! GCTACAGAGAAGGCGCTCTT+TGG + chr3_2:84646915-84646934 Msa0432500:intron 55.0%
!! ACAGAGAAGGCGCTCTTTGG+AGG + chr3_2:84646918-84646937 Msa0432500:intron 55.0%
CGACCTTCCTGGATCTGCTT+CGG + chr3_2:84647725-84647744 Msa0432500:three_prime_UTR 55.0%
AACGCACGCCAAGTCGCATA+TGG - chr3_2:84647962-84647981 None:intergenic 55.0%
! GCAGAACGATGTGCTGTTGC+AGG + chr3_2:84648475-84648494 Msa0432500:three_prime_UTR 55.0%
AGATGCTGCTAGAGAGCAGC+TGG + chr3_2:84648502-84648521 Msa0432500:three_prime_UTR 55.0%
CACTTCCGGTGTCCTTCTCT+AGG - chr3_2:84649421-84649440 None:intergenic 55.0%
CTATGCCGGCGTAAGCACAG+TGG - chr3_2:84642604-84642623 None:intergenic 60.0%
TTCGCCACTGCCTCTTGGCA+TGG + chr3_2:84642802-84642821 Msa0432500:CDS 60.0%
CAACCTCGACCATGGTCGCT+TGG - chr3_2:84643418-84643437 None:intergenic 60.0%
CTCCCGCTGTCCAGTCAAGA+TGG + chr3_2:84646336-84646355 Msa0432500:intron 60.0%
!! GAAGGCGCTCTTTGGAGGAG+TGG + chr3_2:84646923-84646942 Msa0432500:three_prime_UTR 60.0%
! GATGGCTCTGTCGACCTTCC+TGG + chr3_2:84647714-84647733 Msa0432500:three_prime_UTR 60.0%
GGGACTTCGCCACTGCCTCT+TGG + chr3_2:84642797-84642816 Msa0432500:CDS 65.0%
ATCCCTCCAGCGCCACCCAA+GGG + chr3_2:84646046-84646065 Msa0432500:CDS 65.0%
ATGAGTCCCTTGGGTGGCGC+TGG - chr3_2:84646055-84646074 None:intergenic 65.0%
CATCCCTCCAGCGCCACCCA+AGG + chr3_2:84646045-84646064 Msa0432500:CDS 70.0%
! GTCCCTTGGGTGGCGCTGGA+GGG - chr3_2:84646051-84646070 None:intergenic 70.0%
! AGTCCCTTGGGTGGCGCTGG+AGG - chr3_2:84646052-84646071 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 84642492 84649826 84642492 ID=Msa0432500;Name=Msa0432500
chr3_2 mRNA 84642492 84649826 84642492 ID=Msa0432500-mRNA-1;Parent=Msa0432500;Name=Msa0432500-mRNA-1;_AED=0.10;_eAED=0.10;_QI=269|0.63|0.75|0.83|0.81|0.83|12|1977|198
chr3_2 exon 84642492 84642850 84642492 ID=Msa0432500-mRNA-1:exon:23958;Parent=Msa0432500-mRNA-1
chr3_2 exon 84643242 84643280 84643242 ID=Msa0432500-mRNA-1:exon:23959;Parent=Msa0432500-mRNA-1
chr3_2 exon 84643851 84643991 84643851 ID=Msa0432500-mRNA-1:exon:23960;Parent=Msa0432500-mRNA-1
chr3_2 exon 84644059 84644064 84644059 ID=Msa0432500-mRNA-1:exon:23961;Parent=Msa0432500-mRNA-1
chr3_2 exon 84644893 84644991 84644893 ID=Msa0432500-mRNA-1:exon:23962;Parent=Msa0432500-mRNA-1
chr3_2 exon 84646019 84646255 84646019 ID=Msa0432500-mRNA-1:exon:23963;Parent=Msa0432500-mRNA-1
chr3_2 exon 84646922 84647030 84646922 ID=Msa0432500-mRNA-1:exon:23964;Parent=Msa0432500-mRNA-1
chr3_2 exon 84647145 84647953 84647145 ID=Msa0432500-mRNA-1:exon:23965;Parent=Msa0432500-mRNA-1
chr3_2 exon 84648142 84648306 84648142 ID=Msa0432500-mRNA-1:exon:23966;Parent=Msa0432500-mRNA-1
chr3_2 exon 84648431 84648673 84648431 ID=Msa0432500-mRNA-1:exon:23967;Parent=Msa0432500-mRNA-1
chr3_2 exon 84649045 84649263 84649045 ID=Msa0432500-mRNA-1:exon:23968;Parent=Msa0432500-mRNA-1
chr3_2 exon 84649410 84649826 84649410 ID=Msa0432500-mRNA-1:exon:23969;Parent=Msa0432500-mRNA-1
chr3_2 five_prime_UTR 84642492 84642760 84642492 ID=Msa0432500-mRNA-1:five_prime_utr;Parent=Msa0432500-mRNA-1
chr3_2 CDS 84642761 84642850 84642761 ID=Msa0432500-mRNA-1:cds;Parent=Msa0432500-mRNA-1
chr3_2 CDS 84643242 84643280 84643242 ID=Msa0432500-mRNA-1:cds;Parent=Msa0432500-mRNA-1
chr3_2 CDS 84643851 84643991 84643851 ID=Msa0432500-mRNA-1:cds;Parent=Msa0432500-mRNA-1
chr3_2 CDS 84644059 84644064 84644059 ID=Msa0432500-mRNA-1:cds;Parent=Msa0432500-mRNA-1
chr3_2 CDS 84644893 84644991 84644893 ID=Msa0432500-mRNA-1:cds;Parent=Msa0432500-mRNA-1
chr3_2 CDS 84646019 84646240 84646019 ID=Msa0432500-mRNA-1:cds;Parent=Msa0432500-mRNA-1
chr3_2 three_prime_UTR 84646241 84646255 84646241 ID=Msa0432500-mRNA-1:three_prime_utr;Parent=Msa0432500-mRNA-1
chr3_2 three_prime_UTR 84646922 84647030 84646922 ID=Msa0432500-mRNA-1:three_prime_utr;Parent=Msa0432500-mRNA-1
chr3_2 three_prime_UTR 84647145 84647953 84647145 ID=Msa0432500-mRNA-1:three_prime_utr;Parent=Msa0432500-mRNA-1
chr3_2 three_prime_UTR 84648142 84648306 84648142 ID=Msa0432500-mRNA-1:three_prime_utr;Parent=Msa0432500-mRNA-1
chr3_2 three_prime_UTR 84648431 84648673 84648431 ID=Msa0432500-mRNA-1:three_prime_utr;Parent=Msa0432500-mRNA-1
chr3_2 three_prime_UTR 84649045 84649263 84649045 ID=Msa0432500-mRNA-1:three_prime_utr;Parent=Msa0432500-mRNA-1
chr3_2 three_prime_UTR 84649410 84649826 84649410 ID=Msa0432500-mRNA-1:three_prime_utr;Parent=Msa0432500-mRNA-1
Gene Sequence

>Msa0432500

ATGCAGAGACGAAGTCCTCCAAAGCATAGACACGATGGGACTTCGCCACTGCCTCTTGGCATGGATTGGAGTCCTGCACCTCGAAAATGGTCAGTCAGTACTGGGCATGTTAGGACTCCCAGTCCAAAGCTTATTTATCCTCCCTTTCCAATTACACAGAATGGGCGGGATACCGAATGGCCACACAATCATCGTACCGGTTGGAGTTATTGCATTATAATACCTTCTTGGGTCTTCGTGCCAAAATCAAAGAATTCAGATCCTATAGTGGTTTGGTTCTACAGGCTTCAAGTTGGTATACAATCACCAGAAGGGATTACAAATATCCATGGAGTACTAAGAAGGTTCAATGATTTTTTAAACTTGTATGTTGATCTTAAAAAGGAATTTCCAAGGAGAAACATCCCTCCAGCGCCACCCAAGGGACTCATGCGATTGAAAAGCCGAGCTTTGTTGGAAGAGGTTGGGAATTTCTTAAACTTGTTACAATACCAATTGTTGCATGTTTGGGATTATGGATCTGCATATGTCCTCTTGCTTGAATTTAATTACTTTATACAAACATGGTCTAAATGCATCACAACTGAAAATTACTAG
Protein sequence

>Msa0432500

MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWSVSTGHVRTPSPKLIYPPFPITQNGRDTEWPHNHRTGWSYCIIIPSWVFVPKSKNSDPIVVWFYRLQVGIQSPEGITNIHGVLRRFNDFLNLYVDLKKEFPRRNIPPAPPKGLMRLKSRALLEEVGNFLNLLQYQLLHVWDYGSAYVLLLEFNYFIQTWSKCITTENY*