AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0900620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0900620 MtrunA17_Chr6g0486791 97.887 710 11 1 1 706 1 710 0.0 1398
Msa0900620 MtrunA17_Chr8g0392921 25.725 276 191 6 408 680 377 641 7.88e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0900620 AT2G19950.2 59.164 742 235 13 1 707 1 709 0.0 789
Msa0900620 AT2G19950.1 58.974 741 235 13 1 707 1 706 0.0 785
Msa0900620 AT1G18190.1 25.510 294 193 8 390 680 369 639 2.08e-12 70.9

Find 159 sgRNAs with CRISPR-Local

Find 683 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTAAAGATTAATTCATTTC+TGG 0.116517 6_1:+96837901 Msa0900620:five_prime_UTR
TCTTTGACAGGCTCATTATT+TGG 0.201982 6_1:-96841392 None:intergenic
AATCTACAGCCTTGGTAATT+TGG 0.216900 6_1:-96841499 None:intergenic
TGAGCAGAAGGTGGCACTTC+TGG 0.220385 6_1:+96844586 Msa0900620:CDS
ATTACTTGATTTGCTTCTTC+TGG 0.247068 6_1:-96844798 None:intergenic
GTTGGGGTCTTTAATTCCTT+TGG 0.251889 6_1:-96841456 None:intergenic
ATGCTTGTCAGTTCCTCTTT+TGG 0.260978 6_1:-96847363 None:intergenic
AAAATCTAAACCTGGAGATT+TGG 0.274907 6_1:-96840499 None:intergenic
AATTACCAAGGCTGTAGATT+TGG 0.292589 6_1:+96841502 Msa0900620:CDS
GTACTGGTGGGTCCATGGTT+GGG 0.299291 6_1:-96841473 None:intergenic
AGAAGCAAATCAAGTAATTC+AGG 0.302936 6_1:+96844803 Msa0900620:CDS
ATTTGTAGAGCAGGCTTCTA+TGG 0.311690 6_1:+96843849 Msa0900620:intron
TTTGGAATCCAATCAAAATA+TGG 0.314133 6_1:+96841520 Msa0900620:CDS
TAGAGAAGTTGCAGAATCTA+TGG 0.315690 6_1:+96847222 Msa0900620:CDS
CTTGGCTGGTGCAAGTATTC+AGG 0.325402 6_1:+96846728 Msa0900620:CDS
AGAAGTGGAGCGTGCTCGTC+AGG 0.328567 6_1:+96845639 Msa0900620:CDS
GTATCTCTTGCATCGCCTTC+AGG 0.333267 6_1:+96847052 Msa0900620:CDS
TTGGGGTCTTTAATTCCTTT+GGG 0.341419 6_1:-96841455 None:intergenic
AAATCAAGAATTGCAAGATA+TGG 0.341493 6_1:+96844743 Msa0900620:CDS
GCAGTTAAACTGCTAGATTC+AGG 0.348092 6_1:+96846843 Msa0900620:CDS
TCGGGAACTAACTGATCTTT+TGG 0.349704 6_1:+96846055 Msa0900620:CDS
CTGGAAAGTTAACAATAATT+CGG 0.350968 6_1:+96837920 Msa0900620:five_prime_UTR
CTCGTCGAGCATCGTCATCT+TGG 0.351652 6_1:+96846356 Msa0900620:CDS
CTTTGATTGATTTGTAGAAA+TGG 0.353849 6_1:-96841228 None:intergenic
ATCCGAAAATGCACAGTTAG+AGG 0.354925 6_1:+96842047 Msa0900620:CDS
TGGAGTCTATGATGAGAAAT+CGG 0.360262 6_1:+96843562 Msa0900620:CDS
GGATTTGTCTGAAAGTAAAA+AGG 0.369350 6_1:+96842235 Msa0900620:CDS
TCGTCGAGCATCGTCATCTT+GGG 0.373501 6_1:+96846357 Msa0900620:CDS
TACAAGAGTTGAGTCAAATA+TGG 0.375369 6_1:+96842262 Msa0900620:CDS
AGTACTGGTGGGTCCATGGT+TGG 0.375753 6_1:-96841474 None:intergenic
TTTAAAAGCACAGCTGGTTT+GGG 0.376507 6_1:+96847300 Msa0900620:three_prime_UTR
TATTTAAACAATCCGATTCC+AGG 0.385646 6_1:-96847505 None:intergenic
TGGCTCTTTCGATTCACAAT+AGG 0.387256 6_1:-96841629 None:intergenic
TACTGGTGGGTCCATGGTTG+GGG 0.388141 6_1:-96841472 None:intergenic
ATACAAGTCACGGACCAATT+TGG 0.389023 6_1:-96843775 None:intergenic
ATGCTCAGCATCCCTCTTCA+TGG 0.395923 6_1:-96845841 None:intergenic
GATGCCGTATCACCTGTATT+AGG 0.398019 6_1:+96841266 Msa0900620:CDS
TGCACATAATGCTACCAAAT+TGG 0.400081 6_1:+96843761 Msa0900620:CDS
TATGGAAAGAGAAGTGGAAT+TGG 0.404922 6_1:+96843867 Msa0900620:CDS
TGAAAACAAATTATCTTCCT+TGG 0.412415 6_1:+96845675 Msa0900620:CDS
AGCTGCTACAGAGTTTCAAT+TGG 0.412733 6_1:+96846198 Msa0900620:CDS
AAGCTGGTTGCTAATGAAAC+AGG 0.417550 6_1:+96840459 Msa0900620:CDS
TGTACTGAATGATAAATATA+CGG 0.422165 6_1:+96847451 Msa0900620:three_prime_UTR
AATGTTGCTCAGGTTTGTGC+TGG 0.423701 6_1:+96841997 Msa0900620:intron
CTTGGTAATTTGGTCAGTAC+TGG 0.427821 6_1:-96841489 None:intergenic
TTGCATCACCGTCACTTGGC+TGG 0.431466 6_1:+96846714 Msa0900620:CDS
TCCTTTGCATCACCGTCACT+TGG 0.433272 6_1:+96846710 Msa0900620:CDS
GTCAAATATGGCCGACGCCT+TGG 0.436981 6_1:+96842274 Msa0900620:CDS
TTTCGGATTTGTATTCTTGA+AGG 0.441499 6_1:-96842032 None:intergenic
TACTGCCCTTGCAAGGATAC+AGG 0.443308 6_1:+96843912 Msa0900620:CDS
CTAAAGAGGCAAGGCTAGCT+CGG 0.446754 6_1:+96841841 Msa0900620:CDS
AAACTGCTGCAGATTGAAGC+TGG 0.447523 6_1:+96847412 Msa0900620:three_prime_UTR
GAAGAACGAAATAGAAGAAC+AGG 0.457219 6_1:-96847790 None:intergenic
GGTAATTTGGTCAGTACTGG+TGG 0.461480 6_1:-96841486 None:intergenic
TCTGAAGCCTTCTCTTTGAC+AGG 0.466826 6_1:-96841404 None:intergenic
AGAGCAACATTCAGATTCTC+AGG 0.469026 6_1:-96847683 None:intergenic
CTCATTATTTGGAGAGGTAG+TGG 0.470428 6_1:-96841381 None:intergenic
ACAGGATCAACTTTGTCGCT+TGG 0.474868 6_1:-96841182 None:intergenic
CTCAAAACAACTAGATCTAC+TGG 0.478986 6_1:+96841813 Msa0900620:CDS
TGAATCTCCAGCAGCAACAT+TGG 0.480796 6_1:+96841142 Msa0900620:CDS
TGCTGAGCATTATTCACGTC+AGG 0.481972 6_1:+96845854 Msa0900620:CDS
GACAATGAAGTTCCTAATAC+AGG 0.482717 6_1:-96841278 None:intergenic
GAGTAGACATTCCCTGGAAT+CGG 0.484773 6_1:+96847493 Msa0900620:three_prime_UTR
GTAGGTACAAGCGGACAGTA+TGG 0.486131 6_1:+96847195 Msa0900620:intron
TTTCTCGAGTAGACATTCCC+TGG 0.487451 6_1:+96847487 Msa0900620:three_prime_UTR
TTGAAATGGCTGCCATGAAG+AGG 0.491031 6_1:+96845829 Msa0900620:CDS
CAATCTGATTCCAAATCTCC+AGG 0.492147 6_1:+96840489 Msa0900620:CDS
TCAAGTATGCAAACCAAAAG+AGG 0.493895 6_1:+96847350 Msa0900620:three_prime_UTR
TATAATTAGTGATACTACTA+AGG 0.494705 6_1:+96841112 Msa0900620:CDS
TATGGAATCCCGTTTGCGAC+GGG 0.496199 6_1:+96844761 Msa0900620:CDS
TGTTGATCGAAGGGCAAAGC+TGG 0.498785 6_1:+96840443 Msa0900620:CDS
CAGAAAGAGAAATAGAATAG+TGG 0.499021 6_1:+96838093 Msa0900620:five_prime_UTR
AGTATTGTATCACTAGTACT+AGG 0.499624 6_1:-96841581 None:intergenic
TCTTTAATTCCTTTGGGAGA+AGG 0.500285 6_1:-96841449 None:intergenic
ACAAGCATGGCAGGAAGAAG+TGG 0.502194 6_1:+96845624 Msa0900620:CDS
CAGTTAAACTGCTAGATTCA+GGG 0.506568 6_1:+96846844 Msa0900620:CDS
GGTCAGTACTGGTGGGTCCA+TGG 0.515491 6_1:-96841478 None:intergenic
TGTTGAGCGAAGAGCAGAAG+AGG 0.517834 6_1:+96843731 Msa0900620:CDS
AAACAAATTATCTTCCTTGG+AGG 0.518875 6_1:+96845678 Msa0900620:CDS
GTTCTGTGGAAGCAATTAAG+AGG 0.520381 6_1:+96842330 Msa0900620:CDS
TATTTAGATACAAGCATGGC+AGG 0.521800 6_1:+96845615 Msa0900620:intron
AGCGTGCTCGTCAGGGTCAG+AGG 0.523036 6_1:+96845647 Msa0900620:CDS
TTCAGAGAATAGCAGATGAA+AGG 0.523166 6_1:+96844543 Msa0900620:intron
AACTGCTGCAGATTGAAGCT+GGG 0.525658 6_1:+96847413 Msa0900620:three_prime_UTR
CTTACATCCAATGTTGCTGC+TGG 0.525883 6_1:-96841149 None:intergenic
GGATTCCAAATCTACAGCCT+TGG 0.526693 6_1:-96841507 None:intergenic
TCAGAGCCACGAGATTTCTC+TGG 0.528975 6_1:+96846871 Msa0900620:CDS
TATTTGAAGTTGTTGATCGA+AGG 0.530291 6_1:+96840433 Msa0900620:CDS
AGAGCTGAGTAAATCATATG+AGG 0.531479 6_1:+96842190 Msa0900620:CDS
TGAGACTGATATAAAAGCCC+TGG 0.534677 6_1:+96846384 Msa0900620:CDS
ATTTGAAGTTGTTGATCGAA+GGG 0.536558 6_1:+96840434 Msa0900620:CDS
GTGTCACCTGTATCCTTGCA+AGG 0.537166 6_1:-96843918 None:intergenic
GAGAAAGAAATCAAAACCTA+AGG 0.539713 6_1:+96840984 Msa0900620:CDS
CTAGCATAAAACAGCTACAA+AGG 0.540411 6_1:+96842213 Msa0900620:CDS
CACCTTCTGCTCAAGTTCTG+TGG 0.541065 6_1:-96844576 None:intergenic
ATTCCTTTGGGAGAAGGAGA+AGG 0.543665 6_1:-96841443 None:intergenic
TTCTATTATGTAGGTACAAG+CGG 0.544425 6_1:+96847186 Msa0900620:intron
ATCTACTGGTCAGTCTAAAG+AGG 0.544662 6_1:+96841827 Msa0900620:CDS
TAGCATAAAACAGCTACAAA+GGG 0.545018 6_1:+96842214 Msa0900620:CDS
ATATGGAATCCCGTTTGCGA+CGG 0.546003 6_1:+96844760 Msa0900620:CDS
TAAAGAGGCAAGGCTAGCTC+GGG 0.546779 6_1:+96841842 Msa0900620:CDS
GGAGTTAGAGAAACGCTATC+GGG 0.547356 6_1:+96846037 Msa0900620:CDS
GGCTTCAGATATTAATGAAG+TGG 0.555877 6_1:+96841418 Msa0900620:CDS
GGAGTCTATGATGAGAAATC+GGG 0.557020 6_1:+96843563 Msa0900620:CDS
GGCCACAGAACTTGAGCAGA+AGG 0.558071 6_1:+96844574 Msa0900620:CDS
TGACGGTGATGCAAAGGAAG+AGG 0.558083 6_1:-96846705 None:intergenic
TAATTAGCTTCAAATGGGCA+AGG 0.558301 6_1:+96840949 Msa0900620:intron
TAAGCGTCTTAAAGAAGCAC+AGG 0.558991 6_1:+96846231 Msa0900620:CDS
GTAATTTGGTCAGTACTGGT+GGG 0.559125 6_1:-96841485 None:intergenic
GCCAAGTGACGGTGATGCAA+AGG 0.559895 6_1:-96846711 None:intergenic
TTAGTTGGTACATAGGCTCA+AGG 0.560057 6_1:+96841786 Msa0900620:intron
TCAAATGGGCAAGGATCTCA+AGG 0.560116 6_1:+96840958 Msa0900620:CDS
TACAGAGTTTCAATTGGAGA+AGG 0.562314 6_1:+96846204 Msa0900620:CDS
AGTTCCTAATACAGGTGATA+CGG 0.565098 6_1:-96841270 None:intergenic
GGCTTCTATGGAAAGAGAAG+TGG 0.566482 6_1:+96843861 Msa0900620:intron
AGAGAAGTTGCAGAATCTAT+GGG 0.567670 6_1:+96847223 Msa0900620:CDS
CGGAGTTAGAGAAACGCTAT+CGG 0.568280 6_1:+96846036 Msa0900620:CDS
TATGTGAGAATATCAAAACT+TGG 0.568918 6_1:+96847716 Msa0900620:three_prime_UTR
ATTTAAACAATCCGATTCCA+GGG 0.571868 6_1:-96847504 None:intergenic
TGAGGCAGTTCTAAGTTCTG+TGG 0.572856 6_1:+96842316 Msa0900620:CDS
AACAGAGACAAGGATGATGC+AGG 0.576385 6_1:+96843590 Msa0900620:CDS
CATTTCTACAAATCAATCAA+AGG 0.577407 6_1:+96841229 Msa0900620:CDS
TAATGAGCCTGTCAAAGAGA+AGG 0.578478 6_1:+96841397 Msa0900620:CDS
GCGTGCTCGTCAGGGTCAGA+GGG 0.582607 6_1:+96845648 Msa0900620:CDS
AGGCAAGCTGCATTGTCAGA+AGG 0.583185 6_1:+96842350 Msa0900620:CDS
CTTCTTGTAACAGGAGCATA+CGG 0.587267 6_1:+96846016 Msa0900620:intron
AAATTAACTAAGAACCTGCA+TGG 0.587332 6_1:-96842384 None:intergenic
TATATCTTATCAGGCAAACA+TGG 0.587486 6_1:+96843542 Msa0900620:intron
ACTAATTATAGTTGATGACT+CGG 0.590513 6_1:-96841099 None:intergenic
TCTCTGACATTCGCCTAGAG+AGG 0.595348 6_1:-96847390 None:intergenic
ACTACAGGAACAACTTGAAG+AGG 0.599696 6_1:+96841685 Msa0900620:CDS
GACAAGCATCTAACCTCTCT+AGG 0.601390 6_1:+96847377 Msa0900620:three_prime_UTR
GGAATTAAAGACCCCAACCA+TGG 0.601722 6_1:+96841461 Msa0900620:CDS
AGTCATCTACTGCCCTTGCA+AGG 0.607621 6_1:+96843905 Msa0900620:CDS
AGGAAGTCTAGCATCCATGC+AGG 0.607835 6_1:+96842370 Msa0900620:CDS
GAAAGTTAACAATAATTCGG+TGG 0.608604 6_1:+96837923 Msa0900620:five_prime_UTR
TACTTGCACCAGCCAAGTGA+CGG 0.608717 6_1:-96846722 None:intergenic
ACAAACACAATTAGAAACCA+TGG 0.610153 6_1:+96846165 Msa0900620:CDS
AGAGGAACTTCTTACTGCAG+AGG 0.610498 6_1:+96842065 Msa0900620:CDS
GGTATATTTAGATACAAGCA+TGG 0.613099 6_1:+96845611 Msa0900620:intron
GACAGGCTCATTATTTGGAG+AGG 0.614711 6_1:-96841387 None:intergenic
GATCCTTCTCCTTCTCCCAA+AGG 0.617494 6_1:+96841440 Msa0900620:CDS
TAAACACGACACAGGTGATG+TGG 0.617868 6_1:+96841325 Msa0900620:CDS
CTGGTCAGTCTAAAGAGGCA+AGG 0.618138 6_1:+96841832 Msa0900620:CDS
TCATGGCTCAAAGTTGCTGA+AGG 0.624196 6_1:+96838233 Msa0900620:CDS
AGTTAAACTGCTAGATTCAG+GGG 0.632750 6_1:+96846845 Msa0900620:CDS
AGCAGATGAAAGGACAGCAA+AGG 0.634944 6_1:+96844553 Msa0900620:CDS
GAAGTGGAGCGTGCTCGTCA+GGG 0.640662 6_1:+96845640 Msa0900620:CDS
CACAGAACTTGAGCAGAAGG+TGG 0.645266 6_1:+96844577 Msa0900620:CDS
GCAGAAGGTGGCACTTCTGG+AGG 0.646399 6_1:+96844589 Msa0900620:CDS
GCTCTTGCAGGCTCTAAGAG+AGG 0.648071 6_1:+96843698 Msa0900620:intron
TGTCACCTGTATCCTTGCAA+GGG 0.649317 6_1:-96843917 None:intergenic
TGAAATGGCTGCCATGAAGA+GGG 0.649515 6_1:+96845830 Msa0900620:CDS
ACAGGTGATACGGCATCAGT+CGG 0.655720 6_1:-96841260 None:intergenic
ATCGGGAACTAACAGAGACA+AGG 0.677418 6_1:+96843580 Msa0900620:CDS
TGTGAATCGAAAGAGCCAAG+AGG 0.684923 6_1:+96841634 Msa0900620:CDS
GATACTGTTAAACACGACAC+AGG 0.707727 6_1:+96841317 Msa0900620:CDS
ATAACGCCAGAGAAATCTCG+TGG 0.710424 6_1:-96846877 None:intergenic
CAGTACTGACCAAATTACCA+AGG 0.715990 6_1:+96841490 Msa0900620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGTTTTTGAATTTATTT+TGG + chr6_1:96838962-96838981 Msa0900620:intron 10.0%
!!! TTATTTTATAATTTGGTTAT+TGG + chr6_1:96839059-96839078 Msa0900620:intron 10.0%
!! GTAAAAAAATATAAAAGAAT+AGG - chr6_1:96839196-96839215 None:intergenic 10.0%
!!! ATTTAAAAAAAGTTTTTGTT+TGG + chr6_1:96839265-96839284 Msa0900620:intron 10.0%
!!! ATGCTTAATTAATTTTTAAA+TGG + chr6_1:96839438-96839457 Msa0900620:intron 10.0%
!!! TTAATTAATTTTTAAATGGT+TGG + chr6_1:96839442-96839461 Msa0900620:intron 10.0%
!! ATAAAAATCTTAATATTCAA+AGG - chr6_1:96842624-96842643 None:intergenic 10.0%
!!! TTGAATATTAAGATTTTTAT+TGG + chr6_1:96842624-96842643 Msa0900620:intron 10.0%
!!! CGTTTTATTTATAATTTTTA+AGG + chr6_1:96843503-96843522 Msa0900620:intron 10.0%
! GCGGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839667-96839686 Msa0900620:intron 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839668-96839687 Msa0900620:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839669-96839688 Msa0900620:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839669-96839688 Msa0900620:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839669-96839688 Msa0900620:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839669-96839688 Msa0900620:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839669-96839688 Msa0900620:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839669-96839688 Msa0900620:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839669-96839688 Msa0900620:intron 100.0%
!!! CAATTATTTCTTTTTTGATT+TGG + chr6_1:96838473-96838492 Msa0900620:intron 15.0%
!!! TTGTTTATTTTGATCTTAAT+AGG + chr6_1:96838696-96838715 Msa0900620:intron 15.0%
!!! TGTTTATTTTGATCTTAATA+GGG + chr6_1:96838697-96838716 Msa0900620:intron 15.0%
!!! TGATACTTATTTTATGTTTT+TGG + chr6_1:96839000-96839019 Msa0900620:intron 15.0%
!!! TTGAGACTTATTTTATAATT+TGG + chr6_1:96839052-96839071 Msa0900620:intron 15.0%
!!! ATTTTGTTTTTCTCTTTTAA+TGG + chr6_1:96840276-96840295 Msa0900620:intron 15.0%
!! ATAAAAATAAAATCTAAACC+TGG - chr6_1:96840510-96840529 None:intergenic 15.0%
!! GTTTAATCTTTCAATTATAT+TGG - chr6_1:96840631-96840650 None:intergenic 15.0%
!! AAGATTATGTATAAAAAAGT+AGG - chr6_1:96842551-96842570 None:intergenic 15.0%
!!! TACTTTTTTATACATAATCT+TGG + chr6_1:96842550-96842569 Msa0900620:intron 15.0%
!!! ATTATATTTTCCTAATATGT+AGG - chr6_1:96842816-96842835 None:intergenic 15.0%
!!! TATATTTGCTATTATGTTAT+CGG - chr6_1:96844006-96844025 None:intergenic 15.0%
!!! TATTTTCAAATATTTTCTCA+TGG - chr6_1:96844078-96844097 None:intergenic 15.0%
!!! TTGTTTCTTTTTTAATATGA+AGG + chr6_1:96844632-96844651 Msa0900620:intron 15.0%
!!! TAGTATTTCTATTTGAAATA+TGG + chr6_1:96844663-96844682 Msa0900620:intron 15.0%
!!! AATTACATTATGTTTTTTTC+TGG + chr6_1:96845087-96845106 Msa0900620:intron 15.0%
!!! ATTACATTATGTTTTTTTCT+GGG + chr6_1:96845088-96845107 Msa0900620:intron 15.0%
!!! AGTTTTTCTATTTTTATATC+TGG + chr6_1:96846911-96846930 Msa0900620:CDS 15.0%
!!! TTTTAAGAAGTGATTATTTC+TGG - chr6_1:96837996-96838015 None:intergenic 20.0%
!!! CGTTTTTTTATATGAAGAAA+CGG - chr6_1:96838184-96838203 None:intergenic 20.0%
!!! CGTAAATTTCAATTTTGATT+CGG + chr6_1:96838309-96838328 Msa0900620:intron 20.0%
!! TTGGTTAATTTAATAGCTTA+TGG + chr6_1:96838492-96838511 Msa0900620:intron 20.0%
!! ATTTCAATCTTAGTTAGATT+TGG + chr6_1:96838615-96838634 Msa0900620:intron 20.0%
!!! GTTTATTTTGATCTTAATAG+GGG + chr6_1:96838698-96838717 Msa0900620:intron 20.0%
!!! TTATGTTTTTGGATTTATCT+TGG + chr6_1:96839011-96839030 Msa0900620:intron 20.0%
!! TCATAACTAATAGCAAAATA+AGG - chr6_1:96839120-96839139 None:intergenic 20.0%
!!! TAAAAAAAGTTTTTGTTTGG+CGG + chr6_1:96839268-96839287 Msa0900620:intron 20.0%
!! TAATTAAGCATTAAGATCTA+GGG - chr6_1:96839429-96839448 None:intergenic 20.0%
!! TTAATTAAGCATTAAGATCT+AGG - chr6_1:96839430-96839449 None:intergenic 20.0%
!! AGTTTGTAATTCTGTTATAT+TGG + chr6_1:96839524-96839543 Msa0900620:intron 20.0%
!!! TTTTTGTAATTAGCTTCAAA+TGG + chr6_1:96840943-96840962 Msa0900620:intron 20.0%
!!! TTTTGTAATTAGCTTCAAAT+GGG + chr6_1:96840944-96840963 Msa0900620:intron 20.0%
!! AAGACACATTTAATTATAGT+TGG - chr6_1:96841048-96841067 None:intergenic 20.0%
!! TATAATTAGTGATACTACTA+AGG + chr6_1:96841112-96841131 Msa0900620:CDS 20.0%
!!! TAATTTTTTAGTTGGTACAT+AGG + chr6_1:96841779-96841798 Msa0900620:intron 20.0%
!! ATTAGGAAAATATAATGAAG+AGG + chr6_1:96842820-96842839 Msa0900620:intron 20.0%
!!! ATAATGGAAACAAATTGAAT+TGG - chr6_1:96843190-96843209 None:intergenic 20.0%
!!! CAATTTCTTTTTAGACATAT+AGG + chr6_1:96843451-96843470 Msa0900620:intron 20.0%
!! AATGGGACATAAAAAATTAT+GGG - chr6_1:96843645-96843664 None:intergenic 20.0%
!!! TTTTAAACAAACTAGTAACT+TGG + chr6_1:96844353-96844372 Msa0900620:intron 20.0%
!! CTGAATAATATTTGATGTAA+CGG - chr6_1:96845436-96845455 None:intergenic 20.0%
!! ATATTAAAAAAATACCTCCA+AGG - chr6_1:96845695-96845714 None:intergenic 20.0%
!! CATTATCTTCAATAAACATA+AGG - chr6_1:96845720-96845739 None:intergenic 20.0%
!! CATATTATTCATTACATGTT+TGG + chr6_1:96845770-96845789 Msa0900620:intron 20.0%
!! AAGTCAAATTAATAATCAAG+AGG - chr6_1:96846278-96846297 None:intergenic 20.0%
!!! TCTTGATTATTAATTTGACT+TGG + chr6_1:96846277-96846296 Msa0900620:intron 20.0%
!!! GTTTTCACTTATTATTATGT+TGG + chr6_1:96846412-96846431 Msa0900620:intron 20.0%
!!! ACTATTTTTAACCATGTATT+TGG + chr6_1:96846797-96846816 Msa0900620:intron 20.0%
!! TGTACTGAATGATAAATATA+CGG + chr6_1:96847451-96847470 Msa0900620:three_prime_UTR 20.0%
!! TTTAGCAGAAGAATAAAAAA+AGG - chr6_1:96847543-96847562 None:intergenic 20.0%
! CGTAAAGATTAATTCATTTC+TGG + chr6_1:96837901-96837920 Msa0900620:five_prime_UTR 25.0%
! CTGGAAAGTTAACAATAATT+CGG + chr6_1:96837920-96837939 Msa0900620:five_prime_UTR 25.0%
!!! TGATTCCTTTTTTGTTACAA+TGG + chr6_1:96838208-96838227 Msa0900620:exon 25.0%
! TTGAAGATTGTTTAGTGTTT+CGG + chr6_1:96838338-96838357 Msa0900620:intron 25.0%
!!! AAAAAAAGTTTTTGTTTGGC+GGG + chr6_1:96839269-96839288 Msa0900620:intron 25.0%
! ATTCTGTTATATTGGAAAGT+AGG + chr6_1:96839532-96839551 Msa0900620:intron 25.0%
! TTCTGTTATATTGGAAAGTA+GGG + chr6_1:96839533-96839552 Msa0900620:intron 25.0%
! AATGAAACGAATCATTGTAA+TGG + chr6_1:96839556-96839575 Msa0900620:intron 25.0%
! TTAGTTAATTAGAACAGTGT+TGG + chr6_1:96839852-96839871 Msa0900620:intron 25.0%
!! CTTCATTAATTACTAGTCTA+AGG + chr6_1:96840229-96840248 Msa0900620:intron 25.0%
! CAAATAAATCTGATCAATCA+GGG - chr6_1:96840419-96840438 None:intergenic 25.0%
! TCAAATAAATCTGATCAATC+AGG - chr6_1:96840420-96840439 None:intergenic 25.0%
!! TTTTATGTTTCTTCTGTTCT+AGG + chr6_1:96840676-96840695 Msa0900620:intron 25.0%
! TACATAGTTAGAGAGAAAAT+AGG + chr6_1:96840744-96840763 Msa0900620:intron 25.0%
! ACATAGTTAGAGAGAAAATA+GGG + chr6_1:96840745-96840764 Msa0900620:intron 25.0%
!!! ACTAATTATAGTTGATGACT+CGG - chr6_1:96841102-96841121 None:intergenic 25.0%
!!! CTTTGATTGATTTGTAGAAA+TGG - chr6_1:96841231-96841250 None:intergenic 25.0%
! CATTTCTACAAATCAATCAA+AGG + chr6_1:96841229-96841248 Msa0900620:CDS 25.0%
!! TTTGGAATCCAATCAAAATA+TGG + chr6_1:96841520-96841539 Msa0900620:CDS 25.0%
!!! TTCTTGATCCATATTTTGAT+TGG - chr6_1:96841531-96841550 None:intergenic 25.0%
! TGAAGAGGTAAAACTTATTA+TGG + chr6_1:96841700-96841719 Msa0900620:intron 25.0%
!!! CTTCTGACTAATTTTTTAGT+TGG + chr6_1:96841771-96841790 Msa0900620:intron 25.0%
! CAACATTAGAAAATATCATC+AGG - chr6_1:96841984-96842003 None:intergenic 25.0%
!! GCAAGTTTAGAATTAATTAC+AGG - chr6_1:96842166-96842185 None:intergenic 25.0%
!! TATGCTACAAAATTTAGTTC+TGG - chr6_1:96842462-96842481 None:intergenic 25.0%
!! TTTTGGTCTATGAATGATAT+GGG + chr6_1:96842658-96842677 Msa0900620:intron 25.0%
!! TTTACACATTTAGCAGATTT+TGG + chr6_1:96843333-96843352 Msa0900620:intron 25.0%
!! TTACACATTTAGCAGATTTT+GGG + chr6_1:96843334-96843353 Msa0900620:intron 25.0%
! TTATAAATAAAACGAAGCTG+TGG - chr6_1:96843497-96843516 None:intergenic 25.0%
! GAATGGGACATAAAAAATTA+TGG - chr6_1:96843646-96843665 None:intergenic 25.0%
! CAACAACTATACATATGAAT+GGG - chr6_1:96843662-96843681 None:intergenic 25.0%
!! ACTGCTGTTAAACTTTTAAA+TGG + chr6_1:96843949-96843968 Msa0900620:intron 25.0%
! TTACTGAGAAAACTCATAAT+TGG + chr6_1:96844027-96844046 Msa0900620:intron 25.0%
!! AATTGGATTTTAAGCATAGT+TGG + chr6_1:96844044-96844063 Msa0900620:intron 25.0%
!! AAACACTTTTGGTATAAACA+AGG - chr6_1:96844184-96844203 None:intergenic 25.0%
!!! TATACCAAAAGTGTTTTAGA+AGG + chr6_1:96844188-96844207 Msa0900620:intron 25.0%
!!! ATTTCCTTCTAAAACACTTT+TGG - chr6_1:96844195-96844214 None:intergenic 25.0%
!!! AAAAGTGTTTTAGAAGGAAA+TGG + chr6_1:96844194-96844213 Msa0900620:intron 25.0%
!!! AAAGTGTTTTAGAAGGAAAT+GGG + chr6_1:96844195-96844214 Msa0900620:intron 25.0%
!! AAACTTTAGAAAAAGCTTGA+GGG - chr6_1:96844275-96844294 None:intergenic 25.0%
!!! TTTTTCTAAAGTTTGTCAAC+TGG + chr6_1:96844281-96844300 Msa0900620:intron 25.0%
! AAATCAAGAATTGCAAGATA+TGG + chr6_1:96844743-96844762 Msa0900620:CDS 25.0%
!! CTTTGAAGATGTAAAATTTG+AGG - chr6_1:96844877-96844896 None:intergenic 25.0%
!! ATCTAAACAATGACACTTTT+TGG - chr6_1:96845013-96845032 None:intergenic 25.0%
! CAATACATGATTCGAAAAAT+AGG + chr6_1:96845367-96845386 Msa0900620:intron 25.0%
! TGAAAACAAATTATCTTCCT+TGG + chr6_1:96845675-96845694 Msa0900620:CDS 25.0%
! ACAAAAATTGAGAGTTGAAA+TGG + chr6_1:96845815-96845834 Msa0900620:CDS 25.0%
!! TTGTAAATTTGGGATCTTTA+TGG - chr6_1:96845977-96845996 None:intergenic 25.0%
!! AGCACAAGTATTGTAAATTT+GGG - chr6_1:96845987-96846006 None:intergenic 25.0%
! AAACCACTTAATTACTTTGT+TGG + chr6_1:96846580-96846599 Msa0900620:intron 25.0%
! AACCACTTAATTACTTTGTT+GGG + chr6_1:96846581-96846600 Msa0900620:intron 25.0%
!!! GTTACTCCATTTTTTGTTTT+TGG + chr6_1:96846638-96846657 Msa0900620:intron 25.0%
! CTTCAACCAAAAACAAAAAA+TGG - chr6_1:96846647-96846666 None:intergenic 25.0%
! CTTATGAAATAACTAATTGC+AGG + chr6_1:96846682-96846701 Msa0900620:intron 25.0%
! GAAAATGACATAAAATGTGA+TGG - chr6_1:96846762-96846781 None:intergenic 25.0%
!! TTTTCGATCTTCTATTATGT+AGG + chr6_1:96847177-96847196 Msa0900620:intron 25.0%
! TATGTGAGAATATCAAAACT+TGG + chr6_1:96847716-96847735 Msa0900620:three_prime_UTR 25.0%
GAAAGTTAACAATAATTCGG+TGG + chr6_1:96837923-96837942 Msa0900620:five_prime_UTR 30.0%
! ATTGCTTCTATTGTGTTTTC+AGG - chr6_1:96837955-96837974 None:intergenic 30.0%
CAGAAAGAGAAATAGAATAG+TGG + chr6_1:96838093-96838112 Msa0900620:five_prime_UTR 30.0%
!!! TATTTTGATCTTAATAGGGG+TGG + chr6_1:96838701-96838720 Msa0900620:intron 30.0%
! TTGAACTCGTTTTCTATAGT+TGG + chr6_1:96838791-96838810 Msa0900620:intron 30.0%
AAATTGAAACACGAGTTAAG+CGG - chr6_1:96838924-96838943 None:intergenic 30.0%
ACGAATCATTGTAATGGTAA+AGG + chr6_1:96839562-96839581 Msa0900620:intron 30.0%
CAAAATCATTGGACCAAAAT+CGG - chr6_1:96839950-96839969 None:intergenic 30.0%
TGTGCACTGTAGAATAATAA+TGG + chr6_1:96840130-96840149 Msa0900620:intron 30.0%
TAATGAAGTATGCATGAGAT+TGG - chr6_1:96840217-96840236 None:intergenic 30.0%
! ATGGTTTTTGTCTAGTAGAA+AGG + chr6_1:96840295-96840314 Msa0900620:intron 30.0%
! TGGTTTTTGTCTAGTAGAAA+GGG + chr6_1:96840296-96840315 Msa0900620:intron 30.0%
! TATTTGAAGTTGTTGATCGA+AGG + chr6_1:96840433-96840452 Msa0900620:CDS 30.0%
! ATTTGAAGTTGTTGATCGAA+GGG + chr6_1:96840434-96840453 Msa0900620:CDS 30.0%
AAAATCTAAACCTGGAGATT+TGG - chr6_1:96840502-96840521 None:intergenic 30.0%
AATTGATTGCTAAACAAAGG+GGG - chr6_1:96840551-96840570 None:intergenic 30.0%
GAATTGATTGCTAAACAAAG+GGG - chr6_1:96840552-96840571 None:intergenic 30.0%
CGAATTGATTGCTAAACAAA+GGG - chr6_1:96840553-96840572 None:intergenic 30.0%
ACGAATTGATTGCTAAACAA+AGG - chr6_1:96840554-96840573 None:intergenic 30.0%
TTCGTAGTCAATACTTAATC+TGG + chr6_1:96840569-96840588 Msa0900620:intron 30.0%
! ACTTAATCTGGAATTAGATC+TGG + chr6_1:96840581-96840600 Msa0900620:intron 30.0%
! CTTAATCTGGAATTAGATCT+GGG + chr6_1:96840582-96840601 Msa0900620:intron 30.0%
ACTATGTAATTCCCAATCTA+CGG - chr6_1:96840732-96840751 None:intergenic 30.0%
CATAGTTAGAGAGAAAATAG+GGG + chr6_1:96840746-96840765 Msa0900620:intron 30.0%
AACACCTACTTTCAAAAAGA+TGG + chr6_1:96840770-96840789 Msa0900620:intron 30.0%
!! TCTACCATCTTTTTGAAAGT+AGG - chr6_1:96840777-96840796 None:intergenic 30.0%
ATGTAAGCACTAGTAATACT+AGG - chr6_1:96840906-96840925 None:intergenic 30.0%
GAGAAAGAAATCAAAACCTA+AGG + chr6_1:96840984-96841003 Msa0900620:CDS 30.0%
TCAAGAAAAAACTGAATCTG+TGG + chr6_1:96841544-96841563 Msa0900620:CDS 30.0%
AGTATTGTATCACTAGTACT+AGG - chr6_1:96841584-96841603 None:intergenic 30.0%
!!! AGTTGTTCCTGTAGTTTTTT+GGG - chr6_1:96841680-96841699 None:intergenic 30.0%
!!! AAGTTGTTCCTGTAGTTTTT+TGG - chr6_1:96841681-96841700 None:intergenic 30.0%
AAATATCATCAGGCATCTAT+TGG - chr6_1:96841974-96841993 None:intergenic 30.0%
! GATATTTTCTAATGTTGCTC+AGG + chr6_1:96841987-96842006 Msa0900620:intron 30.0%
TTTCGGATTTGTATTCTTGA+AGG - chr6_1:96842035-96842054 None:intergenic 30.0%
!!! TGTTTCTTGTTTTAGTGACT+AGG + chr6_1:96842102-96842121 Msa0900620:intron 30.0%
TAGCATAAAACAGCTACAAA+GGG + chr6_1:96842214-96842233 Msa0900620:CDS 30.0%
GGATTTGTCTGAAAGTAAAA+AGG + chr6_1:96842235-96842254 Msa0900620:CDS 30.0%
TACAAGAGTTGAGTCAAATA+TGG + chr6_1:96842262-96842281 Msa0900620:CDS 30.0%
AGCAAAAAATGCTGAAATTG+AGG + chr6_1:96842298-96842317 Msa0900620:CDS 30.0%
AAATTAACTAAGAACCTGCA+TGG - chr6_1:96842387-96842406 None:intergenic 30.0%
TTAATATTCAAAGGTCGACT+TGG - chr6_1:96842615-96842634 None:intergenic 30.0%
!! GTTTTGGTCTATGAATGATA+TGG + chr6_1:96842657-96842676 Msa0900620:intron 30.0%
GCAAAATAATAGTTATGCAG+AGG + chr6_1:96842729-96842748 Msa0900620:intron 30.0%
GTATGTTGCAAATGATTGTT+AGG - chr6_1:96842794-96842813 None:intergenic 30.0%
TTGCAACATACCTACATATT+AGG + chr6_1:96842803-96842822 Msa0900620:intron 30.0%
ATGAAGAGGAATGCAAAAAA+CGG + chr6_1:96842834-96842853 Msa0900620:intron 30.0%
CATTTGCTTTCTCATATGTT+GGG - chr6_1:96842898-96842917 None:intergenic 30.0%
TCATTTGCTTTCTCATATGT+TGG - chr6_1:96842899-96842918 None:intergenic 30.0%
AACATATGAGAAAGCAAATG+AGG + chr6_1:96842898-96842917 Msa0900620:intron 30.0%
CAGTCAGATCAAATAAAAAC+AGG + chr6_1:96842959-96842978 Msa0900620:intron 30.0%
TTATCCATTTCGGATATTGT+TGG - chr6_1:96842997-96843016 None:intergenic 30.0%
TTGATAAAACAAGTGTCTCA+TGG - chr6_1:96843021-96843040 None:intergenic 30.0%
ATCTTTGTCTTCTCCAAATT+TGG - chr6_1:96843142-96843161 None:intergenic 30.0%
AATTAGTGGCAGTTATCTTA+TGG - chr6_1:96843213-96843232 None:intergenic 30.0%
!! TGATGTTCTGAAGAAATTAG+TGG - chr6_1:96843227-96843246 None:intergenic 30.0%
! TACACATTTAGCAGATTTTG+GGG + chr6_1:96843335-96843354 Msa0900620:intron 30.0%
! AACACTGGTTATATCTTATC+AGG + chr6_1:96843533-96843552 Msa0900620:intron 30.0%
TATATCTTATCAGGCAAACA+TGG + chr6_1:96843542-96843561 Msa0900620:intron 30.0%
CCAACAACTATACATATGAA+TGG - chr6_1:96843663-96843682 None:intergenic 30.0%
CCATTCATATGTATAGTTGT+TGG + chr6_1:96843660-96843679 Msa0900620:intron 30.0%
GAACTAAACAATACAAGTCA+CGG - chr6_1:96843788-96843807 None:intergenic 30.0%
AAAATACACTTCGTGTAGTT+AGG + chr6_1:96844092-96844111 Msa0900620:intron 30.0%
!!! AAGTGTTTTAGAAGGAAATG+GGG + chr6_1:96844196-96844215 Msa0900620:intron 30.0%
! CAAACTTTAGAAAAAGCTTG+AGG - chr6_1:96844276-96844295 None:intergenic 30.0%
ACCATCAAAATAGCTTCAAA+GGG - chr6_1:96844466-96844485 None:intergenic 30.0%
TACCATCAAAATAGCTTCAA+AGG - chr6_1:96844467-96844486 None:intergenic 30.0%
GAAATGTTTAATGACAACCT+CGG + chr6_1:96844693-96844712 Msa0900620:intron 30.0%
!! ATTACTTGATTTGCTTCTTC+TGG - chr6_1:96844801-96844820 None:intergenic 30.0%
AGAAGCAAATCAAGTAATTC+AGG + chr6_1:96844803-96844822 Msa0900620:CDS 30.0%
TGTCGTGTATATGAAAATAG+AGG + chr6_1:96844964-96844983 Msa0900620:intron 30.0%
! GTGTCATTGTTTAGATTATG+AGG + chr6_1:96845017-96845036 Msa0900620:intron 30.0%
TGATAAACTATTCATCCGTA+TGG + chr6_1:96845568-96845587 Msa0900620:intron 30.0%
CTAAATATACCAAACTTGCA+AGG - chr6_1:96845602-96845621 None:intergenic 30.0%
GGTATATTTAGATACAAGCA+TGG + chr6_1:96845611-96845630 Msa0900620:intron 30.0%
AAACAAATTATCTTCCTTGG+AGG + chr6_1:96845678-96845697 Msa0900620:CDS 30.0%
ATCCTCTGTCTTATAAATCA+TGG + chr6_1:96845740-96845759 Msa0900620:intron 30.0%
AACCATGATTTATAAGACAG+AGG - chr6_1:96845745-96845764 None:intergenic 30.0%
! ATGTTTGGTTTCAACATTTC+AGG + chr6_1:96845785-96845804 Msa0900620:intron 30.0%
! CAGCACAAGTATTGTAAATT+TGG - chr6_1:96845988-96846007 None:intergenic 30.0%
!! ACTGATCTTTTGGTAATTTC+TGG + chr6_1:96846065-96846084 Msa0900620:intron 30.0%
ACAAACACAATTAGAAACCA+TGG + chr6_1:96846165-96846184 Msa0900620:CDS 30.0%
ATAAGTGAAAACATACTCCA+GGG - chr6_1:96846404-96846423 None:intergenic 30.0%
AATAAGTGAAAACATACTCC+AGG - chr6_1:96846405-96846424 None:intergenic 30.0%
AATCATAAACTTAGCGTCAA+TGG + chr6_1:96846473-96846492 Msa0900620:intron 30.0%
!! ATTCATTTTAATGGGTGTGA+AGG - chr6_1:96846529-96846548 None:intergenic 30.0%
AAAAACTATCTGCTGGAAAA+GGG - chr6_1:96847128-96847147 None:intergenic 30.0%
AAAAAACTATCTGCTGGAAA+AGG - chr6_1:96847129-96847148 None:intergenic 30.0%
TGATTCAAAAAACTATCTGC+TGG - chr6_1:96847135-96847154 None:intergenic 30.0%
!! AATCAAATTTCGTTGACTCT+GGG + chr6_1:96847150-96847169 Msa0900620:intron 30.0%
TTCTATTATGTAGGTACAAG+CGG + chr6_1:96847186-96847205 Msa0900620:intron 30.0%
GTCAAAAATGTCGTAAACTA+TGG - chr6_1:96847258-96847277 None:intergenic 30.0%
!! TACATTTTTAAAAGCACAGC+TGG + chr6_1:96847294-96847313 Msa0900620:three_prime_UTR 30.0%
ATTTAAACAATCCGATTCCA+GGG - chr6_1:96847507-96847526 None:intergenic 30.0%
TATTTAAACAATCCGATTCC+AGG - chr6_1:96847508-96847527 None:intergenic 30.0%
! CTGCTAAAGTTTGTATTTTG+AGG + chr6_1:96847555-96847574 Msa0900620:three_prime_UTR 30.0%
!! CTAAAGTTTGTATTTTGAGG+AGG + chr6_1:96847558-96847577 Msa0900620:three_prime_UTR 30.0%
TGACGCCATTGTAACAAAAA+AGG - chr6_1:96838216-96838235 None:intergenic 35.0%
! TTTTTGTTACAATGGCGTCA+TGG + chr6_1:96838216-96838235 Msa0900620:exon 35.0%
! GTTTAGTAGTTGATGTAGCA+TGG + chr6_1:96838665-96838684 Msa0900620:intron 35.0%
AATTGAAACACGAGTTAAGC+GGG - chr6_1:96838923-96838942 None:intergenic 35.0%
TAAGCATTAAGATCTAGGGA+TGG - chr6_1:96839425-96839444 None:intergenic 35.0%
! AAATCTGATCAGTCCGATTT+TGG + chr6_1:96839934-96839953 Msa0900620:intron 35.0%
!!! CAATGATTTTGACTCACTGT+CGG + chr6_1:96839959-96839978 Msa0900620:intron 35.0%
!!! AATGATTTTGACTCACTGTC+GGG + chr6_1:96839960-96839979 Msa0900620:intron 35.0%
ACTACAAGTGATCAATCTAG+AGG + chr6_1:96840001-96840020 Msa0900620:intron 35.0%
!! TCTAGAGGTGTTGTTAATCA+AGG + chr6_1:96840016-96840035 Msa0900620:intron 35.0%
CTCTATTTGACAACAATGTC+TGG + chr6_1:96840188-96840207 Msa0900620:intron 35.0%
! TTTTTGTCTAGTAGAAAGGG+AGG + chr6_1:96840299-96840318 Msa0900620:intron 35.0%
! TTTTGTCTAGTAGAAAGGGA+GGG + chr6_1:96840300-96840319 Msa0900620:intron 35.0%
CAAAAAGAACATGTCAGAGT+CGG - chr6_1:96840393-96840412 None:intergenic 35.0%
! ACTCTGACATGTTCTTTTTG+TGG + chr6_1:96840393-96840412 Msa0900620:intron 35.0%
ACTCTTGAAGTTAAAACGAC+TGG + chr6_1:96840649-96840668 Msa0900620:intron 35.0%
CTATGTAATTCCCAATCTAC+GGG - chr6_1:96840731-96840750 None:intergenic 35.0%
! TAATTAGCTTCAAATGGGCA+AGG + chr6_1:96840949-96840968 Msa0900620:intron 35.0%
AAATTCAGTGGCAATACCTT+AGG - chr6_1:96841003-96841022 None:intergenic 35.0%
ATCTGAGGATAGAAATTCAG+TGG - chr6_1:96841015-96841034 None:intergenic 35.0%
!! GTGTCTTCTTGAATTTTGAC+AGG + chr6_1:96841061-96841080 Msa0900620:intron 35.0%
!! TGAATTTTGACAGGCTCAAA+AGG + chr6_1:96841070-96841089 Msa0900620:intron 35.0%
!! GAATTTTGACAGGCTCAAAA+GGG + chr6_1:96841071-96841090 Msa0900620:intron 35.0%
ATCCTGTAGCCAAAAATGAT+GGG + chr6_1:96841198-96841217 Msa0900620:CDS 35.0%
AGTTCCTAATACAGGTGATA+CGG - chr6_1:96841273-96841292 None:intergenic 35.0%
GACAATGAAGTTCCTAATAC+AGG - chr6_1:96841281-96841300 None:intergenic 35.0%
TCTTTGACAGGCTCATTATT+TGG - chr6_1:96841395-96841414 None:intergenic 35.0%
GGCTTCAGATATTAATGAAG+TGG + chr6_1:96841418-96841437 Msa0900620:CDS 35.0%
! TCTTTAATTCCTTTGGGAGA+AGG - chr6_1:96841452-96841471 None:intergenic 35.0%
TTGGGGTCTTTAATTCCTTT+GGG - chr6_1:96841458-96841477 None:intergenic 35.0%
! AATCTACAGCCTTGGTAATT+TGG - chr6_1:96841502-96841521 None:intergenic 35.0%
AATTACCAAGGCTGTAGATT+TGG + chr6_1:96841502-96841521 Msa0900620:CDS 35.0%
!!! TTGTTCCTGTAGTTTTTTGG+GGG - chr6_1:96841678-96841697 None:intergenic 35.0%
!!! GTTGTTCCTGTAGTTTTTTG+GGG - chr6_1:96841679-96841698 None:intergenic 35.0%
CTCAAAACAACTAGATCTAC+TGG + chr6_1:96841813-96841832 Msa0900620:CDS 35.0%
TTAGCTAAGACCTCTTCAAA+TGG + chr6_1:96841894-96841913 Msa0900620:intron 35.0%
TAGCTAAGACCTCTTCAAAT+GGG + chr6_1:96841895-96841914 Msa0900620:intron 35.0%
! GAAAAGCTGTAGATTAGTTC+TGG + chr6_1:96841917-96841936 Msa0900620:intron 35.0%
! TTCCTCTAACTGTGCATTTT+CGG - chr6_1:96842052-96842071 None:intergenic 35.0%
AGAGCTGAGTAAATCATATG+AGG + chr6_1:96842190-96842209 Msa0900620:CDS 35.0%
CTAGCATAAAACAGCTACAA+AGG + chr6_1:96842213-96842232 Msa0900620:CDS 35.0%
!! GCTACAAAATTTAGTTCTGG+TGG - chr6_1:96842459-96842478 None:intergenic 35.0%
! TATTGGACTACCAAGAGTTT+TGG + chr6_1:96842641-96842660 Msa0900620:intron 35.0%
CATTCATAGACCAAAACTCT+TGG - chr6_1:96842654-96842673 None:intergenic 35.0%
TGAAGAGGAATGCAAAAAAC+GGG + chr6_1:96842835-96842854 Msa0900620:intron 35.0%
ACTGCTTCAATAATAGGACA+GGG - chr6_1:96842943-96842962 None:intergenic 35.0%
GATCTGACTGCTTCAATAAT+AGG - chr6_1:96842949-96842968 None:intergenic 35.0%
GTCTCATGGTTTATCCATTT+CGG - chr6_1:96843007-96843026 None:intergenic 35.0%
GTCACCTTCTCAATAAATGT+GGG + chr6_1:96843048-96843067 Msa0900620:intron 35.0%
TCAATTGCCTAGTGATATGA+AGG + chr6_1:96843082-96843101 Msa0900620:intron 35.0%
GAAATTGCCTTCATATCACT+AGG - chr6_1:96843092-96843111 None:intergenic 35.0%
CTTGGCACTTACGAAATAAA+TGG - chr6_1:96843116-96843135 None:intergenic 35.0%
CATTTATTTCGTAAGTGCCA+AGG + chr6_1:96843114-96843133 Msa0900620:intron 35.0%
GGCAGTTATCTTATGGATAA+TGG - chr6_1:96843206-96843225 None:intergenic 35.0%
TCATGCACATGTTATAGCTA+TGG + chr6_1:96843258-96843277 Msa0900620:intron 35.0%
CATGCACATGTTATAGCTAT+GGG + chr6_1:96843259-96843278 Msa0900620:intron 35.0%
ACAACAGACACATTTGCAAA+TGG - chr6_1:96843295-96843314 None:intergenic 35.0%
AACCTTTATACTCGACGAAA+TGG + chr6_1:96843358-96843377 Msa0900620:intron 35.0%
ACCTTTATACTCGACGAAAT+GGG + chr6_1:96843359-96843378 Msa0900620:intron 35.0%
TCGACGAAATGGGAAAATAT+TGG + chr6_1:96843369-96843388 Msa0900620:intron 35.0%
ATTGGACTATTATAGCGTGT+TGG + chr6_1:96843387-96843406 Msa0900620:intron 35.0%
!!! TTTTAAGGCATGAGTAACAC+TGG + chr6_1:96843518-96843537 Msa0900620:intron 35.0%
TGGAGTCTATGATGAGAAAT+CGG + chr6_1:96843562-96843581 Msa0900620:CDS 35.0%
TATGGGAATCTTACATGCAT+CGG - chr6_1:96843628-96843647 None:intergenic 35.0%
TGCACATAATGCTACCAAAT+TGG + chr6_1:96843761-96843780 Msa0900620:CDS 35.0%
! GATTATGTGATTTGTAGAGC+AGG + chr6_1:96843840-96843859 Msa0900620:intron 35.0%
TATGGAAAGAGAAGTGGAAT+TGG + chr6_1:96843867-96843886 Msa0900620:CDS 35.0%
AGTTTAACAGCAGTAAGTGA+TGG - chr6_1:96843943-96843962 None:intergenic 35.0%
!!! AGTGTTTTAGAAGGAAATGG+GGG + chr6_1:96844197-96844216 Msa0900620:intron 35.0%
TCACCAGCATAAATCATGTA+CGG + chr6_1:96844427-96844446 Msa0900620:intron 35.0%
ATCAAAATAGCTTCAAAGGG+GGG - chr6_1:96844463-96844482 None:intergenic 35.0%
CATCAAAATAGCTTCAAAGG+GGG - chr6_1:96844464-96844483 None:intergenic 35.0%
CCATCAAAATAGCTTCAAAG+GGG - chr6_1:96844465-96844484 None:intergenic 35.0%
TTCAGAGAATAGCAGATGAA+AGG + chr6_1:96844543-96844562 Msa0900620:intron 35.0%
! GACTCAAATTTCTGAGAAGT+AGG + chr6_1:96844830-96844849 Msa0900620:intron 35.0%
AACCAAGTGGAAATTGGTAT+TGG + chr6_1:96845043-96845062 Msa0900620:intron 35.0%
ACCAAGTGGAAATTGGTATT+GGG + chr6_1:96845044-96845063 Msa0900620:intron 35.0%
! TCTGGGATTGAATTGATTAC+TGG + chr6_1:96845105-96845124 Msa0900620:intron 35.0%
CTGGGATTGAATTGATTACT+GGG + chr6_1:96845106-96845125 Msa0900620:intron 35.0%
CATAATGTTCGATCACTAAG+TGG - chr6_1:96845191-96845210 None:intergenic 35.0%
CACTTAGTGATCGAACATTA+TGG + chr6_1:96845189-96845208 Msa0900620:intron 35.0%
GCATAATTTCATCCATGTAG+CGG + chr6_1:96845211-96845230 Msa0900620:intron 35.0%
CTGTTACATGATATGTATCC+CGG + chr6_1:96845394-96845413 Msa0900620:intron 35.0%
TGCAAGGTTATGATTCCATA+CGG - chr6_1:96845586-96845605 None:intergenic 35.0%
GAATCATAACCTTGCAAGTT+TGG + chr6_1:96845590-96845609 Msa0900620:intron 35.0%
TATTTAGATACAAGCATGGC+AGG + chr6_1:96845615-96845634 Msa0900620:intron 35.0%
!!! TCTTTTGGTAATTTCTGGCA+TGG + chr6_1:96846070-96846089 Msa0900620:intron 35.0%
TTCTGGCATGGTTAAATTTC+AGG + chr6_1:96846082-96846101 Msa0900620:intron 35.0%
TACAGAGTTTCAATTGGAGA+AGG + chr6_1:96846204-96846223 Msa0900620:CDS 35.0%
ATTAATAATCAAGAGGCCAC+AGG - chr6_1:96846271-96846290 None:intergenic 35.0%
AGCCCAACAAAGTAATTAAG+TGG - chr6_1:96846586-96846605 None:intergenic 35.0%
CATAAAGCATGCCAAATACA+TGG - chr6_1:96846811-96846830 None:intergenic 35.0%
CAGTTAAACTGCTAGATTCA+GGG + chr6_1:96846844-96846863 Msa0900620:CDS 35.0%
AGTTAAACTGCTAGATTCAG+GGG + chr6_1:96846845-96846864 Msa0900620:CDS 35.0%
AATAGAAAAACTCGAGCTGT+TGG - chr6_1:96846903-96846922 None:intergenic 35.0%
AAACTCAAATCCTTCAAAGG+TGG - chr6_1:96846985-96847004 None:intergenic 35.0%
AGCAAACTCAAATCCTTCAA+AGG - chr6_1:96846988-96847007 None:intergenic 35.0%
AAATGAGCATCTTTACCTGA+AGG - chr6_1:96847070-96847089 None:intergenic 35.0%
!! GAATCAAATTTCGTTGACTC+TGG + chr6_1:96847149-96847168 Msa0900620:intron 35.0%
TAGAGAAGTTGCAGAATCTA+TGG + chr6_1:96847222-96847241 Msa0900620:CDS 35.0%
AGAGAAGTTGCAGAATCTAT+GGG + chr6_1:96847223-96847242 Msa0900620:CDS 35.0%
!! TTTTAAAAGCACAGCTGGTT+TGG + chr6_1:96847299-96847318 Msa0900620:three_prime_UTR 35.0%
! TTTAAAAGCACAGCTGGTTT+GGG + chr6_1:96847300-96847319 Msa0900620:three_prime_UTR 35.0%
! ATTTTGCTGAACTGTTGTCA+AGG - chr6_1:96847328-96847347 None:intergenic 35.0%
TCAAGTATGCAAACCAAAAG+AGG + chr6_1:96847350-96847369 Msa0900620:three_prime_UTR 35.0%
! TTTACGCAAACGCGATTTTC+AGG - chr6_1:96837887-96837906 None:intergenic 40.0%
!!! AAAGCGACGTCGTTTTAGAA+TGG + chr6_1:96838148-96838167 Msa0900620:five_prime_UTR 40.0%
GGTAACGTAACGTAACGTAA+CGG + chr6_1:96838254-96838273 Msa0900620:intron 40.0%
TCTTAATAGGGGTGGCAAAA+CGG + chr6_1:96838709-96838728 Msa0900620:intron 40.0%
! CTCGTTTTCTATAGTTGGCT+CGG + chr6_1:96838796-96838815 Msa0900620:intron 40.0%
!! TTTCTATAGTTGGCTCGGTT+CGG + chr6_1:96838801-96838820 Msa0900620:intron 40.0%
CTCGGTCACAAAATTTGACT+CGG + chr6_1:96839346-96839365 Msa0900620:intron 40.0%
!!! TCGTTTTTAGCGGGCTTAAA+CGG + chr6_1:96839380-96839399 Msa0900620:intron 40.0%
CGACAGTGAGTCAAAATCAT+TGG - chr6_1:96839961-96839980 None:intergenic 40.0%
CTCACTGTCGGGAAAATAAA+TGG + chr6_1:96839971-96839990 Msa0900620:intron 40.0%
TCAAGGATCGCAGATAATAG+TGG + chr6_1:96840033-96840052 Msa0900620:intron 40.0%
TCTGCTATGCTACAACACTA+TGG + chr6_1:96840067-96840086 Msa0900620:intron 40.0%
! GTCCAAATTTTGCTACGCTA+TGG + chr6_1:96840156-96840175 Msa0900620:intron 40.0%
CACCATAGCGTAGCAAAATT+TGG - chr6_1:96840161-96840180 None:intergenic 40.0%
TTTGTCTAGTAGAAAGGGAG+GGG + chr6_1:96840301-96840320 Msa0900620:intron 40.0%
AAGCTGGTTGCTAATGAAAC+AGG + chr6_1:96840459-96840478 Msa0900620:CDS 40.0%
CAATCTGATTCCAAATCTCC+AGG + chr6_1:96840489-96840508 Msa0900620:CDS 40.0%
TTGTCCTTAAACCCGTAGAT+TGG + chr6_1:96840717-96840736 Msa0900620:intron 40.0%
TGTCCTTAAACCCGTAGATT+GGG + chr6_1:96840718-96840737 Msa0900620:intron 40.0%
ATTCCCAATCTACGGGTTTA+AGG - chr6_1:96840724-96840743 None:intergenic 40.0%
! GTTTTGTCTACACATGCCAA+AGG - chr6_1:96840806-96840825 None:intergenic 40.0%
AACCCGTAGATGTTCTAGTA+AGG + chr6_1:96840823-96840842 Msa0900620:intron 40.0%
CTCCTTACTAGAACATCTAC+GGG - chr6_1:96840828-96840847 None:intergenic 40.0%
CCTCCTTACTAGAACATCTA+CGG - chr6_1:96840829-96840848 None:intergenic 40.0%
CGTAGATGTTCTAGTAAGGA+GGG + chr6_1:96840827-96840846 Msa0900620:intron 40.0%
GATCCTGTAGCCAAAAATGA+TGG + chr6_1:96841197-96841216 Msa0900620:CDS 40.0%
! GGAATCACTCCCATCATTTT+TGG - chr6_1:96841210-96841229 None:intergenic 40.0%
GATACTGTTAAACACGACAC+AGG + chr6_1:96841317-96841336 Msa0900620:CDS 40.0%
CTCATTATTTGGAGAGGTAG+TGG - chr6_1:96841384-96841403 None:intergenic 40.0%
TAATGAGCCTGTCAAAGAGA+AGG + chr6_1:96841397-96841416 Msa0900620:CDS 40.0%
GTTGGGGTCTTTAATTCCTT+TGG - chr6_1:96841459-96841478 None:intergenic 40.0%
!! GTAATTTGGTCAGTACTGGT+GGG - chr6_1:96841488-96841507 None:intergenic 40.0%
! CTTGGTAATTTGGTCAGTAC+TGG - chr6_1:96841492-96841511 None:intergenic 40.0%
!! CAGTACTGACCAAATTACCA+AGG + chr6_1:96841490-96841509 Msa0900620:CDS 40.0%
TGGCTCTTTCGATTCACAAT+AGG - chr6_1:96841632-96841651 None:intergenic 40.0%
!!! TGTCGGTTTTATGATCCTCT+TGG - chr6_1:96841652-96841671 None:intergenic 40.0%
!!! TAGTTTTTTGGGGGAGATGT+CGG - chr6_1:96841669-96841688 None:intergenic 40.0%
ACTACAGGAACAACTTGAAG+AGG + chr6_1:96841685-96841704 Msa0900620:CDS 40.0%
! TTAGTTGGTACATAGGCTCA+AGG + chr6_1:96841786-96841805 Msa0900620:intron 40.0%
ATCTACTGGTCAGTCTAAAG+AGG + chr6_1:96841827-96841846 Msa0900620:CDS 40.0%
GAGGTCTTAGCTAACAGAAA+TGG - chr6_1:96841888-96841907 None:intergenic 40.0%
! ACAGCTTTTCCCATTTGAAG+AGG - chr6_1:96841907-96841926 None:intergenic 40.0%
GGCATCTATTGGAAGCAATT+AGG - chr6_1:96841963-96841982 None:intergenic 40.0%
ATCCGAAAATGCACAGTTAG+AGG + chr6_1:96842047-96842066 Msa0900620:CDS 40.0%
!!! TTCAGCATTTTTTGCTGCCA+AGG - chr6_1:96842294-96842313 None:intergenic 40.0%
GTTCTGTGGAAGCAATTAAG+AGG + chr6_1:96842330-96842349 Msa0900620:CDS 40.0%
AAAAAACGGGTGTTTGTGTG+TGG + chr6_1:96842848-96842867 Msa0900620:intron 40.0%
AAAAACGGGTGTTTGTGTGT+GGG + chr6_1:96842849-96842868 Msa0900620:intron 40.0%
AATGAGGCAAACCAGTTGTT+AGG + chr6_1:96842914-96842933 Msa0900620:intron 40.0%
GACTGCTTCAATAATAGGAC+AGG - chr6_1:96842944-96842963 None:intergenic 40.0%
CGTCACCTTCTCAATAAATG+TGG + chr6_1:96843047-96843066 Msa0900620:intron 40.0%
GTCACCCACATTTATTGAGA+AGG - chr6_1:96843055-96843074 None:intergenic 40.0%
AAGTGCCAAGGAACCAAATT+TGG + chr6_1:96843126-96843145 Msa0900620:intron 40.0%
! CTTCTCCAAATTTGGTTCCT+TGG - chr6_1:96843134-96843153 None:intergenic 40.0%
! ATTGGTGACTGACTCTATGT+TGG - chr6_1:96843172-96843191 None:intergenic 40.0%
CTATAACATGTGCATGAAGC+TGG - chr6_1:96843255-96843274 None:intergenic 40.0%
GCAAATGTGTCTGTTGTGTA+TGG + chr6_1:96843298-96843317 Msa0900620:intron 40.0%
TCCCATTTCGTCGAGTATAA+AGG - chr6_1:96843363-96843382 None:intergenic 40.0%
TATGTAGATTCCCACGATAC+TGG - chr6_1:96843415-96843434 None:intergenic 40.0%
! TAAAACGAAGCTGTGGACTA+TGG - chr6_1:96843490-96843509 None:intergenic 40.0%
GGAGTCTATGATGAGAAATC+GGG + chr6_1:96843563-96843582 Msa0900620:CDS 40.0%
CATAAAACTGTTGCTCTTGC+AGG + chr6_1:96843686-96843705 Msa0900620:intron 40.0%
ATACAAGTCACGGACCAATT+TGG - chr6_1:96843778-96843797 None:intergenic 40.0%
ATTTGTAGAGCAGGCTTCTA+TGG + chr6_1:96843849-96843868 Msa0900620:intron 40.0%
TACACTTCGTGTAGTTAGGA+TGG + chr6_1:96844096-96844115 Msa0900620:intron 40.0%
TAAATCATGTACGGCTGTGT+TGG + chr6_1:96844436-96844455 Msa0900620:intron 40.0%
!!! CCCCTTTGAAGCTATTTTGA+TGG + chr6_1:96844462-96844481 Msa0900620:intron 40.0%
TGACAACCTCGGTTATTATC+AGG + chr6_1:96844704-96844723 Msa0900620:intron 40.0%
ACTCAACCTGATAATAACCG+AGG - chr6_1:96844713-96844732 None:intergenic 40.0%
!!! TTTTTTGTTCCCGTCGCAAA+CGG - chr6_1:96844773-96844792 None:intergenic 40.0%
GATTATGAGGACAAACCAAG+TGG + chr6_1:96845030-96845049 Msa0900620:intron 40.0%
AGGACAAACCAAGTGGAAAT+TGG + chr6_1:96845037-96845056 Msa0900620:intron 40.0%
CCAAGTGGAAATTGGTATTG+GGG + chr6_1:96845045-96845064 Msa0900620:intron 40.0%
! GGAAGCATGTTTATCAAACC+GGG - chr6_1:96845415-96845434 None:intergenic 40.0%
! CGGAAGCATGTTTATCAAAC+CGG - chr6_1:96845416-96845435 None:intergenic 40.0%
! CAACTAGTCAAAGGCTTGTT+GGG + chr6_1:96845487-96845506 Msa0900620:intron 40.0%
GACTCGACTCATAAACTTGT+AGG - chr6_1:96845955-96845974 None:intergenic 40.0%
GAACATCGTCTTCTTGTAAC+AGG + chr6_1:96846007-96846026 Msa0900620:intron 40.0%
! CTTCTTGTAACAGGAGCATA+CGG + chr6_1:96846016-96846035 Msa0900620:intron 40.0%
! TCGGGAACTAACTGATCTTT+TGG + chr6_1:96846055-96846074 Msa0900620:CDS 40.0%
AGCTGCTACAGAGTTTCAAT+TGG + chr6_1:96846198-96846217 Msa0900620:CDS 40.0%
! TAAGCGTCTTAAAGAAGCAC+AGG + chr6_1:96846231-96846250 Msa0900620:CDS 40.0%
CTGCCTGTTCAACATGAAAA+CGG - chr6_1:96846315-96846334 None:intergenic 40.0%
TGAGACTGATATAAAAGCCC+TGG + chr6_1:96846384-96846403 Msa0900620:CDS 40.0%
GAAGGAACTTCTTTCTCTAC+CGG - chr6_1:96846511-96846530 None:intergenic 40.0%
GCAGTTAAACTGCTAGATTC+AGG + chr6_1:96846843-96846862 Msa0900620:CDS 40.0%
! ATGCTTGTCAGTTCCTCTTT+TGG - chr6_1:96847366-96847385 None:intergenic 40.0%
AGAGCAACATTCAGATTCTC+AGG - chr6_1:96847686-96847705 None:intergenic 40.0%
TCATGGCTCAAAGTTGCTGA+AGG + chr6_1:96838233-96838252 Msa0900620:CDS 45.0%
CTTAATAGGGGTGGCAAAAC+GGG + chr6_1:96838710-96838729 Msa0900620:intron 45.0%
!! CCAAAAATAGCGGGCCAAAT+GGG - chr6_1:96838754-96838773 None:intergenic 45.0%
!!! ATTTGGCCCGCTATTTTTGG+CGG + chr6_1:96838754-96838773 Msa0900620:intron 45.0%
CGGCTCGTCTCGTTAAAATA+CGG + chr6_1:96838821-96838840 Msa0900620:intron 45.0%
GGCTCGTCTCGTTAAAATAC+GGG + chr6_1:96838822-96838841 Msa0900620:intron 45.0%
GCTCGTCTCGTTAAAATACG+GGG + chr6_1:96838823-96838842 Msa0900620:intron 45.0%
TTAACTCGTTGGAAACGGGA+CGG + chr6_1:96838875-96838894 Msa0900620:intron 45.0%
!! AAAGTTTTTGTTTGGCGGGC+CGG + chr6_1:96839273-96839292 Msa0900620:intron 45.0%
!! TCGTCTCGTCTCGTTTTTAG+CGG + chr6_1:96839370-96839389 Msa0900620:intron 45.0%
!!! CGTTTTTAGCGGGCTTAAAC+GGG + chr6_1:96839381-96839400 Msa0900620:intron 45.0%
!!! GTTTTTAGCGGGCTTAAACG+GGG + chr6_1:96839382-96839401 Msa0900620:intron 45.0%
AAGATCTAGGGATGGCAAAG+CGG - chr6_1:96839417-96839436 None:intergenic 45.0%
! CCTCAGACTAGTTGGTCATT+GGG - chr6_1:96839627-96839646 None:intergenic 45.0%
! CCAATGACCAACTAGTCTGA+GGG + chr6_1:96839625-96839644 Msa0900620:intron 45.0%
ATTACCCCTCGTGCCAATTT+CGG - chr6_1:96839709-96839728 None:intergenic 45.0%
AAATTGGCACGAGGGGTAAT+CGG + chr6_1:96839709-96839728 Msa0900620:intron 45.0%
ACCTTAGAGTGTGCTCTCAA+GGG - chr6_1:96839742-96839761 None:intergenic 45.0%
!! TGGCCTAATGGTGTTGGTTT+GGG - chr6_1:96839765-96839784 None:intergenic 45.0%
!! TTGGCCTAATGGTGTTGGTT+TGG - chr6_1:96839766-96839785 None:intergenic 45.0%
TTGTCTAGTAGAAAGGGAGG+GGG + chr6_1:96840302-96840321 Msa0900620:intron 45.0%
AGGGGGAATTGTTTCACTGT+AGG + chr6_1:96840319-96840338 Msa0900620:intron 45.0%
GGGGGAATTGTTTCACTGTA+GGG + chr6_1:96840320-96840339 Msa0900620:intron 45.0%
AGATGGTAGAGTCTCACCTT+TGG + chr6_1:96840787-96840806 Msa0900620:intron 45.0%
CCGTAGATGTTCTAGTAAGG+AGG + chr6_1:96840826-96840845 Msa0900620:intron 45.0%
ATGTTCTAGTAAGGAGGGCT+GGG + chr6_1:96840832-96840851 Msa0900620:intron 45.0%
TCAAATGGGCAAGGATCTCA+AGG + chr6_1:96840958-96840977 Msa0900620:CDS 45.0%
GTTGGATGTGACATCATCTG+AGG - chr6_1:96841030-96841049 None:intergenic 45.0%
TGAATCTCCAGCAGCAACAT+TGG + chr6_1:96841142-96841161 Msa0900620:CDS 45.0%
CTTACATCCAATGTTGCTGC+TGG - chr6_1:96841152-96841171 None:intergenic 45.0%
ACAGGATCAACTTTGTCGCT+TGG - chr6_1:96841185-96841204 None:intergenic 45.0%
!!! CTCCCATCATTTTTGGCTAC+AGG - chr6_1:96841203-96841222 None:intergenic 45.0%
GATGCCGTATCACCTGTATT+AGG + chr6_1:96841266-96841285 Msa0900620:CDS 45.0%
TAAACACGACACAGGTGATG+TGG + chr6_1:96841325-96841344 Msa0900620:CDS 45.0%
GACAGGCTCATTATTTGGAG+AGG - chr6_1:96841390-96841409 None:intergenic 45.0%
! TCTGAAGCCTTCTCTTTGAC+AGG - chr6_1:96841407-96841426 None:intergenic 45.0%
! ATTCCTTTGGGAGAAGGAGA+AGG - chr6_1:96841446-96841465 None:intergenic 45.0%
GGAATTAAAGACCCCAACCA+TGG + chr6_1:96841461-96841480 Msa0900620:CDS 45.0%
! GGTAATTTGGTCAGTACTGG+TGG - chr6_1:96841489-96841508 None:intergenic 45.0%
GGATTCCAAATCTACAGCCT+TGG - chr6_1:96841510-96841529 None:intergenic 45.0%
TGTGAATCGAAAGAGCCAAG+AGG + chr6_1:96841634-96841653 Msa0900620:CDS 45.0%
CATCTCCCCCAAAAAACTAC+AGG + chr6_1:96841670-96841689 Msa0900620:CDS 45.0%
AATGTTGCTCAGGTTTGTGC+TGG + chr6_1:96841997-96842016 Msa0900620:intron 45.0%
AGAGGAACTTCTTACTGCAG+AGG + chr6_1:96842065-96842084 Msa0900620:CDS 45.0%
!!! ATTTTTTGCTGCCAAGGCGT+CGG - chr6_1:96842288-96842307 None:intergenic 45.0%
!! TGAGGCAGTTCTAAGTTCTG+TGG + chr6_1:96842316-96842335 Msa0900620:CDS 45.0%
!! TCAAAGGTCGACTTGGAGAA+GGG - chr6_1:96842608-96842627 None:intergenic 45.0%
!! TTCAAAGGTCGACTTGGAGA+AGG - chr6_1:96842609-96842628 None:intergenic 45.0%
AAAACGGGTGTTTGTGTGTG+GGG + chr6_1:96842850-96842869 Msa0900620:intron 45.0%
CGCACCAACAATATCCGAAA+TGG + chr6_1:96842990-96843009 Msa0900620:intron 45.0%
ATCGGGAACTAACAGAGACA+AGG + chr6_1:96843580-96843599 Msa0900620:CDS 45.0%
AACAGAGACAAGGATGATGC+AGG + chr6_1:96843590-96843609 Msa0900620:CDS 45.0%
CAAGGATGATGCAGGTAATC+AGG + chr6_1:96843598-96843617 Msa0900620:intron 45.0%
GGCTTCTATGGAAAGAGAAG+TGG + chr6_1:96843861-96843880 Msa0900620:intron 45.0%
TGTCACCTGTATCCTTGCAA+GGG - chr6_1:96843920-96843939 None:intergenic 45.0%
TAGTTAGGATGGTAGTACCC+AGG + chr6_1:96844107-96844126 Msa0900620:intron 45.0%
!! GGGCTGGTCATATCACTATT+TGG + chr6_1:96844155-96844174 Msa0900620:intron 45.0%
GTCAACTGGCATCATTGTAC+AGG + chr6_1:96844295-96844314 Msa0900620:intron 45.0%
CAGCCGTACATGATTTATGC+TGG - chr6_1:96844433-96844452 None:intergenic 45.0%
AGCAGATGAAAGGACAGCAA+AGG + chr6_1:96844553-96844572 Msa0900620:CDS 45.0%
ATATGGAATCCCGTTTGCGA+CGG + chr6_1:96844760-96844779 Msa0900620:CDS 45.0%
! TTTTTGTTCCCGTCGCAAAC+GGG - chr6_1:96844772-96844791 None:intergenic 45.0%
CCCCAATACCAATTTCCACT+TGG - chr6_1:96845048-96845067 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr6_1:96845238-96845257 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr6_1:96845239-96845258 None:intergenic 45.0%
CCAACAAGCCTTTGACTAGT+TGG - chr6_1:96845489-96845508 None:intergenic 45.0%
CCAACTAGTCAAAGGCTTGT+TGG + chr6_1:96845486-96845505 Msa0900620:intron 45.0%
!! TCAAAGGCTTGTTGGGCTAT+TGG + chr6_1:96845494-96845513 Msa0900620:intron 45.0%
TTGAAATGGCTGCCATGAAG+AGG + chr6_1:96845829-96845848 Msa0900620:CDS 45.0%
TGAAATGGCTGCCATGAAGA+GGG + chr6_1:96845830-96845849 Msa0900620:CDS 45.0%
TGCTGAGCATTATTCACGTC+AGG + chr6_1:96845854-96845873 Msa0900620:CDS 45.0%
CGGAGTTAGAGAAACGCTAT+CGG + chr6_1:96846036-96846055 Msa0900620:CDS 45.0%
GGAGTTAGAGAAACGCTATC+GGG + chr6_1:96846037-96846056 Msa0900620:CDS 45.0%
GGTATGTGTTTAAGCTCCTG+TGG + chr6_1:96846252-96846271 Msa0900620:intron 45.0%
CATGAAAACGGCGTCAAGAA+AGG - chr6_1:96846303-96846322 None:intergenic 45.0%
!! ACGCCGTTTTCATGTTGAAC+AGG + chr6_1:96846309-96846328 Msa0900620:intron 45.0%
TCAATGGTCATGTTCTCTGC+CGG + chr6_1:96846489-96846508 Msa0900620:intron 45.0%
ATAACGCCAGAGAAATCTCG+TGG - chr6_1:96846880-96846899 None:intergenic 45.0%
CCTTCAAAGGTGGTTCATGT+CGG - chr6_1:96846975-96846994 None:intergenic 45.0%
GACAAGCATCTAACCTCTCT+AGG + chr6_1:96847377-96847396 Msa0900620:three_prime_UTR 45.0%
AAACTGCTGCAGATTGAAGC+TGG + chr6_1:96847412-96847431 Msa0900620:three_prime_UTR 45.0%
AACTGCTGCAGATTGAAGCT+GGG + chr6_1:96847413-96847432 Msa0900620:three_prime_UTR 45.0%
TTTCTCGAGTAGACATTCCC+TGG + chr6_1:96847487-96847506 Msa0900620:three_prime_UTR 45.0%
GAGTAGACATTCCCTGGAAT+CGG + chr6_1:96847493-96847512 Msa0900620:three_prime_UTR 45.0%
!!! AATTTTTTTTATTTAAAACT+CGG + chr6_1:96839594-96839613 Msa0900620:intron 5.0%
!!! AAAAATTAATTCATTTTAAT+GGG - chr6_1:96846537-96846556 None:intergenic 5.0%
!!! AAAAAATTAATTCATTTTAA+TGG - chr6_1:96846538-96846557 None:intergenic 5.0%
!! AAATAGCGGGCCAAATGGGT+CGG - chr6_1:96838750-96838769 None:intergenic 50.0%
!! CCCATTTGGCCCGCTATTTT+TGG + chr6_1:96838751-96838770 Msa0900620:intron 50.0%
!! GCCAAAAATAGCGGGCCAAA+TGG - chr6_1:96838755-96838774 None:intergenic 50.0%
!!! TTTGGCCCGCTATTTTTGGC+GGG + chr6_1:96838755-96838774 Msa0900620:intron 50.0%
ACTCAGCCCGCCAAAAATAG+CGG - chr6_1:96838764-96838783 None:intergenic 50.0%
CGTCTCGTTAAAATACGGGG+CGG + chr6_1:96838826-96838845 Msa0900620:intron 50.0%
GTCTCGTTAAAATACGGGGC+GGG + chr6_1:96838827-96838846 Msa0900620:intron 50.0%
CGTTTCCAACGAGTTAAGCG+GGG - chr6_1:96838872-96838891 None:intergenic 50.0%
CCGTTTCCAACGAGTTAAGC+GGG - chr6_1:96838873-96838892 None:intergenic 50.0%
CCCGCTTAACTCGTTGGAAA+CGG + chr6_1:96838870-96838889 Msa0900620:intron 50.0%
CCCGTTTCCAACGAGTTAAG+CGG - chr6_1:96838874-96838893 None:intergenic 50.0%
CCGCTTAACTCGTTGGAAAC+GGG + chr6_1:96838871-96838890 Msa0900620:intron 50.0%
TAACTCGTTGGAAACGGGAC+GGG + chr6_1:96838876-96838895 Msa0900620:intron 50.0%
!!! CGTCTCGTCTCGTTTTTAGC+GGG + chr6_1:96839371-96839390 Msa0900620:intron 50.0%
AGATCTAGGGATGGCAAAGC+GGG - chr6_1:96839416-96839435 None:intergenic 50.0%
! AGACTAGTTGGTCATTGGGC+TGG - chr6_1:96839623-96839642 None:intergenic 50.0%
! CCCAATGACCAACTAGTCTG+AGG + chr6_1:96839624-96839643 Msa0900620:intron 50.0%
! CCCTCAGACTAGTTGGTCAT+TGG - chr6_1:96839628-96839647 None:intergenic 50.0%
GACCTTAGAGTGTGCTCTCA+AGG - chr6_1:96839743-96839762 None:intergenic 50.0%
GGTCCCAAACCAACACCATT+AGG + chr6_1:96839759-96839778 Msa0900620:intron 50.0%
!! TTGGGTTGGCCTAATGGTGT+TGG - chr6_1:96839771-96839790 None:intergenic 50.0%
!! AGTCACTTGGGTTGGCCTAA+TGG - chr6_1:96839777-96839796 None:intergenic 50.0%
AGAGAGCAAGTCACTTGGGT+TGG - chr6_1:96839785-96839804 None:intergenic 50.0%
CACGAGAGAGCAAGTCACTT+GGG - chr6_1:96839789-96839808 None:intergenic 50.0%
!! TTGCTACGCTATGGTGCTGT+AGG + chr6_1:96840165-96840184 Msa0900620:intron 50.0%
TAGGGTGTGCAATGATGCTC+TGG + chr6_1:96840338-96840357 Msa0900620:intron 50.0%
! GTGTGCAATGATGCTCTGGA+TGG + chr6_1:96840342-96840361 Msa0900620:intron 50.0%
AGTCGGAAAGCAACAACAGG+AGG - chr6_1:96840376-96840395 None:intergenic 50.0%
CAGAGTCGGAAAGCAACAAC+AGG - chr6_1:96840379-96840398 None:intergenic 50.0%
TGTTGATCGAAGGGCAAAGC+TGG + chr6_1:96840443-96840462 Msa0900620:CDS 50.0%
GATGTTCTAGTAAGGAGGGC+TGG + chr6_1:96840831-96840850 Msa0900620:intron 50.0%
ACAGGTGATACGGCATCAGT+CGG - chr6_1:96841263-96841282 None:intergenic 50.0%
GATCCTTCTCCTTCTCCCAA+AGG + chr6_1:96841440-96841459 Msa0900620:CDS 50.0%
CTGGTCAGTCTAAAGAGGCA+AGG + chr6_1:96841832-96841851 Msa0900620:CDS 50.0%
! CTAAAGAGGCAAGGCTAGCT+CGG + chr6_1:96841841-96841860 Msa0900620:CDS 50.0%
! TAAAGAGGCAAGGCTAGCTC+GGG + chr6_1:96841842-96841861 Msa0900620:CDS 50.0%
AGGCAAGCTGCATTGTCAGA+AGG + chr6_1:96842350-96842369 Msa0900620:CDS 50.0%
AGGAAGTCTAGCATCCATGC+AGG + chr6_1:96842370-96842389 Msa0900620:CDS 50.0%
CGTGTTGGATCCAGTATCGT+GGG + chr6_1:96843402-96843421 Msa0900620:intron 50.0%
TGTTGAGCGAAGAGCAGAAG+AGG + chr6_1:96843731-96843750 Msa0900620:CDS 50.0%
AGTCATCTACTGCCCTTGCA+AGG + chr6_1:96843905-96843924 Msa0900620:CDS 50.0%
TACTGCCCTTGCAAGGATAC+AGG + chr6_1:96843912-96843931 Msa0900620:CDS 50.0%
GTGTCACCTGTATCCTTGCA+AGG - chr6_1:96843921-96843940 None:intergenic 50.0%
CACCTTCTGCTCAAGTTCTG+TGG - chr6_1:96844579-96844598 None:intergenic 50.0%
CACAGAACTTGAGCAGAAGG+TGG + chr6_1:96844577-96844596 Msa0900620:CDS 50.0%
TATGGAATCCCGTTTGCGAC+GGG + chr6_1:96844761-96844780 Msa0900620:CDS 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr6_1:96845240-96845259 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr6_1:96845237-96845256 Msa0900620:intron 50.0%
GTCCAGCTCCAACTAGTCAA+AGG + chr6_1:96845478-96845497 Msa0900620:intron 50.0%
! AGCCTTTGACTAGTTGGAGC+TGG - chr6_1:96845483-96845502 None:intergenic 50.0%
ACAAGCATGGCAGGAAGAAG+TGG + chr6_1:96845624-96845643 Msa0900620:CDS 50.0%
ATGCTCAGCATCCCTCTTCA+TGG - chr6_1:96845844-96845863 None:intergenic 50.0%
!!! AGCAGCTTTTTCGCTGACCA+TGG - chr6_1:96846185-96846204 None:intergenic 50.0%
! TCGTCGAGCATCGTCATCTT+GGG + chr6_1:96846357-96846376 Msa0900620:CDS 50.0%
TGACGGTGATGCAAAGGAAG+AGG - chr6_1:96846708-96846727 None:intergenic 50.0%
TCCTTTGCATCACCGTCACT+TGG + chr6_1:96846710-96846729 Msa0900620:CDS 50.0%
TACTTGCACCAGCCAAGTGA+CGG - chr6_1:96846725-96846744 None:intergenic 50.0%
CTTGGCTGGTGCAAGTATTC+AGG + chr6_1:96846728-96846747 Msa0900620:CDS 50.0%
TCAGAGCCACGAGATTTCTC+TGG + chr6_1:96846871-96846890 Msa0900620:CDS 50.0%
CCGACATGAACCACCTTTGA+AGG + chr6_1:96846972-96846991 Msa0900620:intron 50.0%
GTATCTCTTGCATCGCCTTC+AGG + chr6_1:96847052-96847071 Msa0900620:CDS 50.0%
GTAGGTACAAGCGGACAGTA+TGG + chr6_1:96847195-96847214 Msa0900620:intron 50.0%
TCTCTGACATTCGCCTAGAG+AGG - chr6_1:96847393-96847412 None:intergenic 50.0%
CTCAGCCCGCCAAAAATAGC+GGG - chr6_1:96838763-96838782 None:intergenic 55.0%
GTTAAAATACGGGGCGGGCA+CGG + chr6_1:96838832-96838851 Msa0900620:intron 55.0%
TTAAAATACGGGGCGGGCAC+GGG + chr6_1:96838833-96838852 Msa0900620:intron 55.0%
TTCCAACGAGTTAAGCGGGG+CGG - chr6_1:96838869-96838888 None:intergenic 55.0%
!! TTAGTGGTGGGCTTGCGAGT+TGG - chr6_1:96839303-96839322 None:intergenic 55.0%
CTCGCAAGCCCACCACTAAA+CGG + chr6_1:96839304-96839323 Msa0900620:intron 55.0%
TCGCAAGCCCACCACTAAAC+GGG + chr6_1:96839305-96839324 Msa0900620:intron 55.0%
!! TTTAGCGGGCTTAAACGGGG+CGG + chr6_1:96839385-96839404 Msa0900620:intron 55.0%
CGAGGAACCCTCAGACTAGT+TGG - chr6_1:96839635-96839654 None:intergenic 55.0%
TTCCTCGCACCATCCACTTG+CGG + chr6_1:96839648-96839667 Msa0900620:intron 55.0%
! GCCCTTGAGAGCACACTCTA+AGG + chr6_1:96839738-96839757 Msa0900620:intron 55.0%
CCACGAGAGAGCAAGTCACT+TGG - chr6_1:96839790-96839809 None:intergenic 55.0%
!! CCAAGTGACTTGCTCTCTCG+TGG + chr6_1:96839787-96839806 Msa0900620:intron 55.0%
GAGGGCTGGGAGATAACAGA+AGG + chr6_1:96840845-96840864 Msa0900620:intron 55.0%
! TACTGGTGGGTCCATGGTTG+GGG - chr6_1:96841475-96841494 None:intergenic 55.0%
! GTACTGGTGGGTCCATGGTT+GGG - chr6_1:96841476-96841495 None:intergenic 55.0%
!! AGTACTGGTGGGTCCATGGT+TGG - chr6_1:96841477-96841496 None:intergenic 55.0%
GTCAAATATGGCCGACGCCT+TGG + chr6_1:96842274-96842293 Msa0900620:CDS 55.0%
GGACAGGGATGCCTAACAAC+TGG - chr6_1:96842928-96842947 None:intergenic 55.0%
GCGTGTTGGATCCAGTATCG+TGG + chr6_1:96843401-96843420 Msa0900620:intron 55.0%
!! GCTCTTGCAGGCTCTAAGAG+AGG + chr6_1:96843698-96843717 Msa0900620:intron 55.0%
TGCAGCCGGAAAACTGTGCA+GGG - chr6_1:96844133-96844152 None:intergenic 55.0%
TTGCAGCCGGAAAACTGTGC+AGG - chr6_1:96844134-96844153 None:intergenic 55.0%
! TGCACAGTTTTCCGGCTGCA+AGG + chr6_1:96844133-96844152 Msa0900620:intron 55.0%
! GCACAGTTTTCCGGCTGCAA+GGG + chr6_1:96844134-96844153 Msa0900620:intron 55.0%
! CACAGTTTTCCGGCTGCAAG+GGG + chr6_1:96844135-96844154 Msa0900620:intron 55.0%
GGCCACAGAACTTGAGCAGA+AGG + chr6_1:96844574-96844593 Msa0900620:CDS 55.0%
TGAGCAGAAGGTGGCACTTC+TGG + chr6_1:96844586-96844605 Msa0900620:CDS 55.0%
ACTAAGTGGGGTCCGCTACA+TGG - chr6_1:96845226-96845245 None:intergenic 55.0%
!! ATGTAGCGGACCCCACTTAG+TGG + chr6_1:96845225-96845244 Msa0900620:intron 55.0%
!! TGTAGCGGACCCCACTTAGT+GGG + chr6_1:96845226-96845245 Msa0900620:intron 55.0%
GGACCCCACTTAGTGGGATA+AGG + chr6_1:96845232-96845251 Msa0900620:intron 55.0%
AGTTGGAGCTGGACAAGCTG+TGG - chr6_1:96845472-96845491 None:intergenic 55.0%
! CTCGTCGAGCATCGTCATCT+TGG + chr6_1:96846356-96846375 Msa0900620:CDS 55.0%
GCCAAGTGACGGTGATGCAA+AGG - chr6_1:96846714-96846733 None:intergenic 55.0%
TTGCATCACCGTCACTTGGC+TGG + chr6_1:96846714-96846733 Msa0900620:CDS 55.0%
CGCAAGCCCACCACTAAACG+GGG + chr6_1:96839306-96839325 Msa0900620:intron 60.0%
AAGCCCACCACTAAACGGGG+CGG + chr6_1:96839309-96839328 Msa0900620:intron 60.0%
! GCGGGGCGAGATTTTGGACT+CGG + chr6_1:96839328-96839347 Msa0900620:intron 60.0%
!! TTAGCGGGCTTAAACGGGGC+GGG + chr6_1:96839386-96839405 Msa0900620:intron 60.0%
TCCTCGCACCATCCACTTGC+GGG + chr6_1:96839649-96839668 Msa0900620:intron 60.0%
AGCCCACCGAAATTGGCACG+AGG + chr6_1:96839700-96839719 Msa0900620:intron 60.0%
GCCCACCGAAATTGGCACGA+GGG + chr6_1:96839701-96839720 Msa0900620:intron 60.0%
CCCCTCGTGCCAATTTCGGT+GGG - chr6_1:96839705-96839724 None:intergenic 60.0%
CCCACCGAAATTGGCACGAG+GGG + chr6_1:96839702-96839721 Msa0900620:intron 60.0%
ACCCCTCGTGCCAATTTCGG+TGG - chr6_1:96839706-96839725 None:intergenic 60.0%
GAGTGTGCTCTCAAGGGCTC+AGG - chr6_1:96839736-96839755 None:intergenic 60.0%
!! GGTCAGTACTGGTGGGTCCA+TGG - chr6_1:96841481-96841500 None:intergenic 60.0%
ACGGGTGTTTGTGTGTGGGG+TGG + chr6_1:96842853-96842872 Msa0900620:intron 60.0%
CGGGTGTTTGTGTGTGGGGT+GGG + chr6_1:96842854-96842873 Msa0900620:intron 60.0%
GGGTGTTTGTGTGTGGGGTG+GGG + chr6_1:96842855-96842874 Msa0900620:intron 60.0%
GGTGTTTGTGTGTGGGGTGG+GGG + chr6_1:96842856-96842875 Msa0900620:intron 60.0%
GTGTTTGTGTGTGGGGTGGG+GGG + chr6_1:96842857-96842876 Msa0900620:intron 60.0%
CGGAAAACTGTGCAGGGCCT+GGG - chr6_1:96844127-96844146 None:intergenic 60.0%
! CCAGGCCCTGCACAGTTTTC+CGG + chr6_1:96844125-96844144 Msa0900620:intron 60.0%
TATGACCAGCCCCTTGCAGC+CGG - chr6_1:96844147-96844166 None:intergenic 60.0%
GCAGAAGGTGGCACTTCTGG+AGG + chr6_1:96844589-96844608 Msa0900620:CDS 60.0%
AGAAGTGGAGCGTGCTCGTC+AGG + chr6_1:96845639-96845658 Msa0900620:CDS 60.0%
GAAGTGGAGCGTGCTCGTCA+GGG + chr6_1:96845640-96845659 Msa0900620:CDS 60.0%
GCAAAACGGGTCTGACCCGC+CGG + chr6_1:96838723-96838742 Msa0900620:intron 65.0%
CAAAACGGGTCTGACCCGCC+GGG + chr6_1:96838724-96838743 Msa0900620:intron 65.0%
CGTTGGAAACGGGACGGGCA+CGG + chr6_1:96838881-96838900 Msa0900620:intron 65.0%
GTTGGAAACGGGACGGGCAC+GGG + chr6_1:96838882-96838901 Msa0900620:intron 65.0%
TTGGAAACGGGACGGGCACG+GGG + chr6_1:96838883-96838902 Msa0900620:intron 65.0%
!! TGGTGGGCTTGCGAGTTGGC+GGG - chr6_1:96839299-96839318 None:intergenic 65.0%
!! GTGGTGGGCTTGCGAGTTGG+CGG - chr6_1:96839300-96839319 None:intergenic 65.0%
AGCCCACCACTAAACGGGGC+GGG + chr6_1:96839310-96839329 Msa0900620:intron 65.0%
! AACGGGGCGGGGCGAGATTT+TGG + chr6_1:96839322-96839341 Msa0900620:intron 65.0%
CTAGGGATGGCAAAGCGGGC+CGG - chr6_1:96839412-96839431 None:intergenic 65.0%
CCTCGCACCATCCACTTGCG+GGG + chr6_1:96839650-96839669 Msa0900620:intron 65.0%
CTCGCACCATCCACTTGCGG+GGG + chr6_1:96839651-96839670 Msa0900620:intron 65.0%
TCGCACCATCCACTTGCGGG+GGG + chr6_1:96839652-96839671 Msa0900620:intron 65.0%
!! GGGGGCTAGCCCACCGAAAT+TGG + chr6_1:96839693-96839712 Msa0900620:intron 65.0%
TTTGTGTGTGGGGTGGGGGG+TGG + chr6_1:96842860-96842879 Msa0900620:intron 65.0%
TTGTGTGTGGGGTGGGGGGT+GGG + chr6_1:96842861-96842880 Msa0900620:intron 65.0%
CCGGAAAACTGTGCAGGGCC+TGG - chr6_1:96844128-96844147 None:intergenic 65.0%
! GTTTTCCGGCTGCAAGGGGC+TGG + chr6_1:96844139-96844158 Msa0900620:intron 65.0%
AGCGTGCTCGTCAGGGTCAG+AGG + chr6_1:96845647-96845666 Msa0900620:CDS 65.0%
GCGTGCTCGTCAGGGTCAGA+GGG + chr6_1:96845648-96845667 Msa0900620:CDS 65.0%
AATACGGGGCGGGCACGGGA+CGG + chr6_1:96838837-96838856 Msa0900620:intron 70.0%
GGCCGCCCCGCTTAACTCGT+TGG + chr6_1:96838864-96838883 Msa0900620:intron 70.0%
GCCCACCACTAAACGGGGCG+GGG + chr6_1:96839311-96839330 Msa0900620:intron 70.0%
GCCCCGCCCCGTTTAGTGGT+GGG - chr6_1:96839315-96839334 None:intergenic 70.0%
TCTCGCCCCGCCCCGTTTAG+TGG - chr6_1:96839319-96839338 None:intergenic 70.0%
CCCCGCAAGTGGATGGTGCG+AGG - chr6_1:96839653-96839672 None:intergenic 70.0%
CGCACCATCCACTTGCGGGG+GGG + chr6_1:96839653-96839672 Msa0900620:intron 70.0%
GCACCATCCACTTGCGGGGG+GGG + chr6_1:96839654-96839673 Msa0900620:intron 70.0%
CACCATCCACTTGCGGGGGG+GGG + chr6_1:96839655-96839674 Msa0900620:intron 70.0%
ACCATCCACTTGCGGGGGGG+GGG + chr6_1:96839656-96839675 Msa0900620:intron 70.0%
TGTGTGTGGGGTGGGGGGTG+GGG + chr6_1:96842862-96842881 Msa0900620:intron 70.0%
ACCCGCCGGGCCGACCCATT+TGG + chr6_1:96838737-96838756 Msa0900620:intron 75.0%
GCCAAATGGGTCGGCCCGGC+GGG - chr6_1:96838741-96838760 None:intergenic 75.0%
GGCCAAATGGGTCGGCCCGG+CGG - chr6_1:96838742-96838761 None:intergenic 75.0%
GCGGGCCAAATGGGTCGGCC+CGG - chr6_1:96838745-96838764 None:intergenic 75.0%
ATACGGGGCGGGCACGGGAC+GGG + chr6_1:96838838-96838857 Msa0900620:intron 75.0%
! GGGCTTGCGAGTTGGCGGGC+CGG - chr6_1:96839295-96839314 None:intergenic 75.0%
CGCCCCGCCCCGTTTAGTGG+TGG - chr6_1:96839316-96839335 None:intergenic 75.0%
CGGGCTTAAACGGGGCGGGC+CGG + chr6_1:96839390-96839409 Msa0900620:intron 75.0%
CCATCCACTTGCGGGGGGGG+GGG + chr6_1:96839657-96839676 Msa0900620:intron 75.0%
CATCCACTTGCGGGGGGGGG+GGG + chr6_1:96839658-96839677 Msa0900620:intron 75.0%
ATCCACTTGCGGGGGGGGGG+GGG + chr6_1:96839659-96839678 Msa0900620:intron 75.0%
! TACGGGGCGGGCACGGGACG+GGG + chr6_1:96838839-96838858 Msa0900620:intron 80.0%
! AACGGGACGGGCACGGGGCG+TGG + chr6_1:96838888-96838907 Msa0900620:intron 80.0%
! GACGGGCACGGGGCGTGGCA+GGG + chr6_1:96838893-96838912 Msa0900620:intron 80.0%
! ACGGGCACGGGGCGTGGCAG+GGG + chr6_1:96838894-96838913 Msa0900620:intron 80.0%
! CCCCCCCCCCCGCAAGTGGA+TGG - chr6_1:96839660-96839679 None:intergenic 80.0%
! TCCACTTGCGGGGGGGGGGG+GGG + chr6_1:96839660-96839679 Msa0900620:intron 80.0%
! GGACGGGCACGGGGCGTGGC+AGG + chr6_1:96838892-96838911 Msa0900620:intron 85.0%
! GGCACGGGGCGTGGCAGGGG+CGG + chr6_1:96838897-96838916 Msa0900620:intron 85.0%
! CCACTTGCGGGGGGGGGGGG+GGG + chr6_1:96839661-96839680 Msa0900620:intron 85.0%
! CACTTGCGGGGGGGGGGGGG+GGG + chr6_1:96839662-96839681 Msa0900620:intron 85.0%
! ACTTGCGGGGGGGGGGGGGG+GGG + chr6_1:96839663-96839682 Msa0900620:intron 85.0%
! GGGGCGGGCACGGGACGGGG+CGG + chr6_1:96838842-96838861 Msa0900620:intron 90.0%
! GGGCGGGCACGGGACGGGGC+GGG + chr6_1:96838843-96838862 Msa0900620:intron 90.0%
! CCCCCCCCCCCCCCCGCAAG+TGG - chr6_1:96839664-96839683 None:intergenic 90.0%
! CTTGCGGGGGGGGGGGGGGG+GGG + chr6_1:96839664-96839683 Msa0900620:intron 90.0%
! TTGCGGGGGGGGGGGGGGGG+GGG + chr6_1:96839665-96839684 Msa0900620:intron 90.0%
! TGCGGGGGGGGGGGGGGGGG+GGG + chr6_1:96839666-96839685 Msa0900620:intron 95.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 96837879 96847801 96837879 ID=Msa0900620;Name=Msa0900620
chr6_1 mRNA 96837879 96847801 96837879 ID=Msa0900620-mRNA-1;Parent=Msa0900620;Name=Msa0900620-mRNA-1;_AED=0.10;_eAED=0.10;_QI=348|1|1|1|1|1|21|525|709
chr6_1 exon 96837879 96838254 96837879 ID=Msa0900620-mRNA-1:exon:16759;Parent=Msa0900620-mRNA-1
chr6_1 exon 96840430 96840510 96840430 ID=Msa0900620-mRNA-1:exon:16760;Parent=Msa0900620-mRNA-1
chr6_1 exon 96840956 96841005 96840956 ID=Msa0900620-mRNA-1:exon:16761;Parent=Msa0900620-mRNA-1
chr6_1 exon 96841083 96841706 96841083 ID=Msa0900620-mRNA-1:exon:16762;Parent=Msa0900620-mRNA-1
chr6_1 exon 96841801 96841863 96841801 ID=Msa0900620-mRNA-1:exon:16763;Parent=Msa0900620-mRNA-1
chr6_1 exon 96842009 96842086 96842009 ID=Msa0900620-mRNA-1:exon:16764;Parent=Msa0900620-mRNA-1
chr6_1 exon 96842188 96842391 96842188 ID=Msa0900620-mRNA-1:exon:16765;Parent=Msa0900620-mRNA-1
chr6_1 exon 96843555 96843611 96843555 ID=Msa0900620-mRNA-1:exon:16766;Parent=Msa0900620-mRNA-1
chr6_1 exon 96843708 96843782 96843708 ID=Msa0900620-mRNA-1:exon:16767;Parent=Msa0900620-mRNA-1
chr6_1 exon 96843862 96843933 96843862 ID=Msa0900620-mRNA-1:exon:16768;Parent=Msa0900620-mRNA-1
chr6_1 exon 96844548 96844610 96844548 ID=Msa0900620-mRNA-1:exon:16769;Parent=Msa0900620-mRNA-1
chr6_1 exon 96844726 96844824 96844726 ID=Msa0900620-mRNA-1:exon:16770;Parent=Msa0900620-mRNA-1
chr6_1 exon 96845622 96845699 96845622 ID=Msa0900620-mRNA-1:exon:16771;Parent=Msa0900620-mRNA-1
chr6_1 exon 96845807 96845875 96845807 ID=Msa0900620-mRNA-1:exon:16772;Parent=Msa0900620-mRNA-1
chr6_1 exon 96846029 96846076 96846029 ID=Msa0900620-mRNA-1:exon:16773;Parent=Msa0900620-mRNA-1
chr6_1 exon 96846157 96846252 96846157 ID=Msa0900620-mRNA-1:exon:16774;Parent=Msa0900620-mRNA-1
chr6_1 exon 96846331 96846407 96846331 ID=Msa0900620-mRNA-1:exon:16775;Parent=Msa0900620-mRNA-1
chr6_1 exon 96846704 96846749 96846704 ID=Msa0900620-mRNA-1:exon:16776;Parent=Msa0900620-mRNA-1
chr6_1 exon 96846834 96846932 96846834 ID=Msa0900620-mRNA-1:exon:16777;Parent=Msa0900620-mRNA-1
chr6_1 exon 96847029 96847073 96847029 ID=Msa0900620-mRNA-1:exon:16778;Parent=Msa0900620-mRNA-1
chr6_1 exon 96847199 96847801 96847199 ID=Msa0900620-mRNA-1:exon:16779;Parent=Msa0900620-mRNA-1
chr6_1 five_prime_UTR 96837879 96838226 96837879 ID=Msa0900620-mRNA-1:five_prime_utr;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96838227 96838254 96838227 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96840430 96840510 96840430 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96840956 96841005 96840956 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96841083 96841706 96841083 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96841801 96841863 96841801 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96842009 96842086 96842009 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96842188 96842391 96842188 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96843555 96843611 96843555 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96843708 96843782 96843708 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96843862 96843933 96843862 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96844548 96844610 96844548 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96844726 96844824 96844726 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96845622 96845699 96845622 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96845807 96845875 96845807 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96846029 96846076 96846029 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96846157 96846252 96846157 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96846331 96846407 96846331 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96846704 96846749 96846704 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96846834 96846932 96846834 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96847029 96847073 96847029 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 CDS 96847199 96847276 96847199 ID=Msa0900620-mRNA-1:cds;Parent=Msa0900620-mRNA-1
chr6_1 three_prime_UTR 96847277 96847801 96847277 ID=Msa0900620-mRNA-1:three_prime_utr;Parent=Msa0900620-mRNA-1
Gene Sequence

>Msa0900620

ATGGCGTCATGGCTCAAAGTTGCTGAAGATTTATTTGAAGTTGTTGATCGAAGGGCAAAGCTGGTTGCTAATGAAACAGGAGAAGAACAATCTGATTCCAAATCTCCAGCTTCAAATGGGCAAGGATCTCAAGGCAAGAGAAAGAAATCAAAACCTAAGGCTCAAAAGGGACAGTCCGAGTCATCAACTATAATTAGTGATACTACTAAGGAGAAAAGTGAATCTCCAGCAGCAACATTGGATGTAAGTGTAACAACTCCAAGCGACAAAGTTGATCCTGTAGCCAAAAATGATGGGAGTGATTCCATTTCTACAAATCAATCAAAGGAGCAGCAACCGACTGATGCCGTATCACCTGTATTAGGAACTTCATTGTCAACAAAGCTAGCTAGCGATACTGTTAAACACGACACAGGTGATGTGGAAGTCTTAGTAAATGATACTGATGTTGATGTTACCACTACCTCTCCAAATAATGAGCCTGTCAAAGAGAAGGCTTCAGATATTAATGAAGTGGATCCTTCTCCTTCTCCCAAAGGAATTAAAGACCCCAACCATGGACCCACCAGTACTGACCAAATTACCAAGGCTGTAGATTTGGAATCCAATCAAAATATGGATCAAGAAAAAACTGAATCTGTGGCTGATGATGTAGCTCCTAGTACTAGTGATACAATACTTAAAGATTCTGATATAAAAGCTGAACCTATTGTGAATCGAAAGAGCCAAGAGGATCATAAAACCGACATCTCCCCCAAAAAACTACAGGAACAACTTGAAGAGGCTCAAGGATTGCTCAAAACAACTAGATCTACTGGTCAGTCTAAAGAGGCAAGGCTAGCTCGGGTTTGTGCTGGACTGTCATCTCGCCTTCAAGAATACAAATCCGAAAATGCACAGTTAGAGGAACTTCTTACTGCAGAGAGAGAGCTGAGTAAATCATATGAGGCTAGCATAAAACAGCTACAAAGGGATTTGTCTGAAAGTAAAAAGGAAGTTACAAGAGTTGAGTCAAATATGGCCGACGCCTTGGCAGCAAAAAATGCTGAAATTGAGGCAGTTCTAAGTTCTGTGGAAGCAATTAAGAGGCAAGCTGCATTGTCAGAAGGAAGTCTAGCATCCATGCAGGCAAACATGGAGTCTATGATGAGAAATCGGGAACTAACAGAGACAAGGATGATGCAGGCTCTAAGAGAGGAGCTAGCATCTGTTGAGCGAAGAGCAGAAGAGGAGCGCGCTGCACATAATGCTACCAAATTGGCTTCTATGGAAAGAGAAGTGGAATTGGAGCATAGAGCAGTTGAGTCATCTACTGCCCTTGCAAGGATACAGAGAATAGCAGATGAAAGGACAGCAAAGGCCACAGAACTTGAGCAGAAGGTGGCACTTCTGGAGGTTGAGTGCTCATCTTTAAATCAAGAATTGCAAGATATGGAATCCCGTTTGCGACGGGAACAAAAAAAATCACCAGAAGAAGCAAATCAAGTAATTCAGATACAAGCATGGCAGGAAGAAGTGGAGCGTGCTCGTCAGGGTCAGAGGGAAGCTGAAAACAAATTATCTTCCTTGGAGGCTGAACTACAAAAATTGAGAGTTGAAATGGCTGCCATGAAGAGGGATGCTGAGCATTATTCACGTCAGGAGCATACGGAGTTAGAGAAACGCTATCGGGAACTAACTGATCTTTTGTACTACAAACAAACACAATTAGAAACCATGGTCAGCGAAAAAGCTGCTACAGAGTTTCAATTGGAGAAGGAAATTAAGCGTCTTAAAGAAGCACAGGCAGAGACTGAAAGAAGTAGAGTTTCTCGTCGAGCATCGTCATCTTGGGAAGATGAGACTGATATAAAAGCCCTGGAGCCTCTTCCTTTGCATCACCGTCACTTGGCTGGTGCAAGTATTCAGTTGCAGAAAGCAGTTAAACTGCTAGATTCAGGGGCAGTCAGAGCCACGAGATTTCTCTGGCGTTATCCAACAGCTCGAGTTTTTCTATTTTTATATCTGATCTTTGTGCATCTCTTCTTGATGTATCTCTTGCATCGCCTTCAGGTACAAGCGGACAGTATGGCTGATAGAGAAGTTGCAGAATCTATGGGACTTTCAAACCATAGTTTACGACATTTTTGA
Protein sequence

>Msa0900620

MASWLKVAEDLFEVVDRRAKLVANETGEEQSDSKSPASNGQGSQGKRKKSKPKAQKGQSESSTIISDTTKEKSESPAATLDVSVTTPSDKVDPVAKNDGSDSISTNQSKEQQPTDAVSPVLGTSLSTKLASDTVKHDTGDVEVLVNDTDVDVTTTSPNNEPVKEKASDINEVDPSPSPKGIKDPNHGPTSTDQITKAVDLESNQNMDQEKTESVADDVAPSTSDTILKDSDIKAEPIVNRKSQEDHKTDISPKKLQEQLEEAQGLLKTTRSTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLTAERELSKSYEASIKQLQRDLSESKKEVTRVESNMADALAAKNAEIEAVLSSVEAIKRQAALSEGSLASMQANMESMMRNRELTETRMMQALREELASVERRAEEERAAHNATKLASMEREVELEHRAVESSTALARIQRIADERTAKATELEQKVALLEVECSSLNQELQDMESRLRREQKKSPEEANQVIQIQAWQEEVERARQGQREAENKLSSLEAELQKLRVEMAAMKRDAEHYSRQEHTELEKRYRELTDLLYYKQTQLETMVSEKAATEFQLEKEIKRLKEAQAETERSRVSRRASSSWEDETDIKALEPLPLHHRHLAGASIQLQKAVKLLDSGAVRATRFLWRYPTARVFLFLYLIFVHLFLMYLLHRLQVQADSMADREVAESMGLSNHSLRHF*