Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425410 | XP_003602521.2 | 99.592 | 245 | 1 | 0 | 1 | 245 | 1 | 245 | 4.72e-171 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425410 | sp|Q99JH1|RP25L_MOUSE | 34.559 | 136 | 80 | 3 | 1 | 127 | 1 | 136 | 5.12e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425410 | G7JAE0 | 99.592 | 245 | 1 | 0 | 1 | 245 | 1 | 245 | 2.25e-171 | 481 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003610 | Msa0425410 | 0.833623 | 4.794516e-56 | -8.615850e-47 |
| Msa0032780 | Msa0425410 | 0.822967 | 1.784185e-53 | -8.615850e-47 |
| Msa0056470 | Msa0425410 | 0.802074 | 6.667013e-49 | -8.615850e-47 |
| Msa0140850 | Msa0425410 | 0.846641 | 1.912069e-59 | -8.615850e-47 |
| Msa0172900 | Msa0425410 | 0.809393 | 1.935163e-50 | -8.615850e-47 |
| Msa0230490 | Msa0425410 | 0.810794 | 9.653643e-51 | -8.615850e-47 |
| Msa0369450 | Msa0425410 | 0.829511 | 4.942783e-55 | -8.615850e-47 |
| Msa0425410 | Msa0427150 | 0.911494 | 5.706206e-83 | -8.615850e-47 |
| Msa0425410 | Msa0436720 | 0.972201 | 2.215481e-134 | -8.615850e-47 |
| Msa0425410 | Msa0698780 | 0.807478 | 4.956434e-50 | -8.615850e-47 |
| Msa0425410 | Msa1163530 | 0.804362 | 2.240119e-49 | -8.615850e-47 |
| Msa0425410 | Msa1165580 | 0.835409 | 1.706429e-56 | -8.615850e-47 |
| Msa0425410 | Msa1166860 | 0.812210 | 4.754496e-51 | -8.615850e-47 |
| Msa0425410 | Msa1233970 | -0.804513 | 2.083381e-49 | -8.615850e-47 |
| Msa0425410 | Msa1276360 | -0.804489 | 2.107456e-49 | -8.615850e-47 |
| Msa0425410 | Msa1357350 | 0.822753 | 2.001302e-53 | -8.615850e-47 |
| Msa0425410 | Msa1362210 | 0.849405 | 3.301797e-60 | -8.615850e-47 |
| Msa0425410 | Msa1402610 | 0.898221 | 6.562371e-77 | -8.615850e-47 |
| Msa0275080 | Msa0425410 | 0.815203 | 1.042647e-51 | -8.615850e-47 |
| Msa0336010 | Msa0425410 | 0.826826 | 2.192098e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425410 | MtrunA17_Chr3g0129501 | 99.539 | 217 | 1 | 0 | 29 | 245 | 1 | 217 | 2.02e-153 | 425 |
| Msa0425410 | MtrunA17_Chr3g0129471 | 94.330 | 194 | 11 | 0 | 29 | 222 | 1 | 194 | 4.48e-93 | 272 |
| Msa0425410 | MtrunA17_Chr3g0129481 | 94.558 | 147 | 5 | 2 | 29 | 173 | 1 | 146 | 2.53e-81 | 242 |
| Msa0425410 | MtrunA17_Chr7g0237631 | 66.197 | 142 | 48 | 0 | 1 | 142 | 1 | 142 | 4.53e-63 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425410 | AT1G76010.2 | 77.027 | 148 | 33 | 1 | 1 | 147 | 1 | 148 | 2.36e-73 | 227 |
| Msa0425410 | AT1G76010.1 | 77.027 | 148 | 33 | 1 | 1 | 147 | 1 | 148 | 2.36e-73 | 227 |
| Msa0425410 | AT1G20220.1 | 72.973 | 148 | 39 | 1 | 1 | 147 | 1 | 148 | 5.11e-70 | 218 |
| Msa0425410 | AT3G07030.2 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 5.45e-58 | 189 |
| Msa0425410 | AT3G07030.3 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 5.45e-58 | 189 |
| Msa0425410 | AT3G07030.4 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 6.59e-58 | 189 |
| Msa0425410 | AT3G07030.1 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 1.47e-57 | 188 |
| Msa0425410 | AT3G07030.5 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 1.81e-57 | 189 |
Find 122 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGATCTCATTCTCGTTAAT+TGG | 0.167660 | 3_2:-75790556 | None:intergenic |
| CGTGGAAGGGGAAGGGGCCG+TGG | 0.286344 | 3_2:+75794423 | Msa0425410:CDS |
| GTTTGTGTTGTGGGTGGGTT+TGG | 0.292633 | 3_2:-75790368 | None:intergenic |
| AGGGGAAGGGGCCGTGGGCG+TGG | 0.303449 | 3_2:+75794429 | Msa0425410:CDS |
| CTGCATCAGAACACTCAAAT+TGG | 0.306654 | 3_2:+75792322 | Msa0425410:CDS |
| GTTAATTGGACTATCTGCTT+TGG | 0.315332 | 3_2:-75790542 | None:intergenic |
| TTTGGGCGAATACGGGGATA+TGG | 0.319104 | 3_2:-75790350 | None:intergenic |
| TGGGTGGGTTTGGGCGAATA+CGG | 0.323601 | 3_2:-75790358 | None:intergenic |
| CGTGGAAGGGGCAGGGGTAG+AGG | 0.333283 | 3_2:+75793715 | Msa0425410:CDS |
| TTAATTGGACTATCTGCTTT+GGG | 0.341721 | 3_2:-75790541 | None:intergenic |
| GCAGAGGGCGCGTCCGTGCA+TGG | 0.343284 | 3_2:+75793949 | Msa0425410:CDS |
| AGGGGAAGGGGTCGTGGAAG+GGG | 0.344420 | 3_2:+75793703 | Msa0425410:CDS |
| AGGGGTCGTGGAAGGGGCAG+GGG | 0.348078 | 3_2:+75793709 | Msa0425410:CDS |
| AGGGGCAGGGGTAGAGGTAG+AGG | 0.349329 | 3_2:+75793721 | Msa0425410:CDS |
| CTTCCCCTTCCTCGCATCCT+TGG | 0.356404 | 3_2:-75793688 | None:intergenic |
| CGAGGTCGTGGAAGGGGAAG+GGG | 0.356867 | 3_2:+75794417 | Msa0425410:CDS |
| AATGGTGAAGCAGATGAAAA+AGG | 0.367578 | 3_2:-75790274 | None:intergenic |
| GGTGCAGCTGTCTGATCACC+TGG | 0.367998 | 3_2:+75794468 | Msa0425410:exon |
| CAGAGGGCGCGTCCGTGCAT+GGG | 0.370655 | 3_2:+75793950 | Msa0425410:CDS |
| TAAGTTAGGCAGGTTGAGTT+AGG | 0.375369 | 3_2:+75794663 | Msa0425410:three_prime_UTR |
| GGGTGGGTTTGGGCGAATAC+GGG | 0.391218 | 3_2:-75790357 | None:intergenic |
| GAAGGGGTCGTGGAAGGGGC+AGG | 0.393845 | 3_2:+75793707 | Msa0425410:CDS |
| TTTGTGTTGTGGGTGGGTTT+GGG | 0.397965 | 3_2:-75790367 | None:intergenic |
| GCTATGGTGCCCAGCCAGTT+GGG | 0.398432 | 3_2:+75794000 | Msa0425410:CDS |
| CCATAGTCATACTGCCCAAC+TGG | 0.407567 | 3_2:-75794014 | None:intergenic |
| GGCTATGGTGCCCAGCCAGT+TGG | 0.409114 | 3_2:+75793999 | Msa0425410:CDS |
| TCTTTATAGGAATGTACAAT+GGG | 0.414498 | 3_2:+75793880 | Msa0425410:intron |
| CGAGGAAGGGGAAGGGGTCG+TGG | 0.418781 | 3_2:+75793697 | Msa0425410:CDS |
| CGTGGACGGGGACGGGGCTA+TGG | 0.423409 | 3_2:+75793984 | Msa0425410:CDS |
| AATGATTACCGAGCTAATAA+AGG | 0.426094 | 3_2:+75792200 | Msa0425410:CDS |
| TATGGTGATGGTTGGGATGG+TGG | 0.427513 | 3_2:+75793912 | Msa0425410:CDS |
| ATTATACCGCTTAACACATC+TGG | 0.428830 | 3_2:-75790213 | None:intergenic |
| TGGGATGGTGGACGTGGCTA+TGG | 0.430740 | 3_2:+75793924 | Msa0425410:CDS |
| CTTTGGGTTTCTCCACCCTC+TGG | 0.434627 | 3_2:-75790525 | None:intergenic |
| CGTGGGCGTGGTCGTGATGC+AGG | 0.434775 | 3_2:+75794441 | Msa0425410:CDS |
| CCAGTTGGGCAGTATGACTA+TGG | 0.448789 | 3_2:+75794014 | Msa0425410:CDS |
| GATGTGTTAAGCGGTATAAT+AGG | 0.449227 | 3_2:+75790216 | Msa0425410:five_prime_UTR |
| AGTCATACTGCCCAACTGGC+TGG | 0.453355 | 3_2:-75794010 | None:intergenic |
| ATAGATACCGTTTGTGTTGT+GGG | 0.454740 | 3_2:-75790377 | None:intergenic |
| AGGATGCGAGGAAGGGGAAG+GGG | 0.457113 | 3_2:+75793691 | Msa0425410:CDS |
| ACCTTCCCAATGGGCGTATG+TGG | 0.458011 | 3_2:-75790190 | None:intergenic |
| GGACGTGGCTATGGTGGCAG+AGG | 0.470972 | 3_2:+75793933 | Msa0425410:CDS |
| AAGGGGAAGGGGTCGTGGAA+GGG | 0.475093 | 3_2:+75793702 | Msa0425410:CDS |
| GGTGGGTTTGGGCGAATACG+GGG | 0.475203 | 3_2:-75790356 | None:intergenic |
| CCGAGGTCGTGGAAGGGGAA+GGG | 0.475726 | 3_2:+75794416 | Msa0425410:CDS |
| TTGTTTCAGAGAAGGATTGT+TGG | 0.483573 | 3_2:+75792298 | Msa0425410:intron |
| GAAGGGGAAGGGGTCGTGGA+AGG | 0.485703 | 3_2:+75793701 | Msa0425410:CDS |
| CACATCTGGACCTTCCCAAT+GGG | 0.486858 | 3_2:-75790199 | None:intergenic |
| TCGTCTTCATATTCATTCAA+AGG | 0.488564 | 3_2:-75793561 | None:intergenic |
| CAAGGATGCGAGGAAGGGGA+AGG | 0.491586 | 3_2:+75793689 | Msa0425410:CDS |
| GCCGAGGTCGTGGAAGGGGA+AGG | 0.493587 | 3_2:+75794415 | Msa0425410:CDS |
| CTGTCTGATCACCTGGGTGT+TGG | 0.500099 | 3_2:+75794475 | Msa0425410:exon |
| TATGGAATATGGTGATGGTT+GGG | 0.502393 | 3_2:+75793905 | Msa0425410:CDS |
| TTTACTTGATCAGCAGGAAG+AGG | 0.502624 | 3_2:-75793537 | None:intergenic |
| AAGGGGTCGTGGAAGGGGCA+GGG | 0.504582 | 3_2:+75793708 | Msa0425410:CDS |
| GCAGGCCGAGGTCGTGGAAG+GGG | 0.508952 | 3_2:+75794411 | Msa0425410:intron |
| GCTCACCAAGGATGCGAGGA+AGG | 0.509460 | 3_2:+75793683 | Msa0425410:CDS |
| TGATGTGCAGGCCGAGGTCG+TGG | 0.516693 | 3_2:+75794405 | Msa0425410:intron |
| GTTGGGCCACATACGCCCAT+TGG | 0.517441 | 3_2:+75790184 | None:intergenic |
| TTCTTTATAGGAATGTACAA+TGG | 0.517576 | 3_2:+75793879 | Msa0425410:intron |
| GAAATTGTTGTCAAAGCAAT+GGG | 0.517640 | 3_2:+75792156 | Msa0425410:CDS |
| CCCTTCCCCTTCCACGACCT+CGG | 0.520014 | 3_2:-75794416 | None:intergenic |
| GATGGTTGGGATGGTGGACG+TGG | 0.520396 | 3_2:+75793918 | Msa0425410:CDS |
| GTGCAGGCCGAGGTCGTGGA+AGG | 0.520404 | 3_2:+75794409 | Msa0425410:intron |
| GTTTCTCATCCTTCCTTGAG+TGG | 0.523264 | 3_2:-75790584 | None:intergenic |
| TACGTTGTCAAAGAAAGAGC+TGG | 0.523803 | 3_2:+75792523 | Msa0425410:CDS |
| AAGGATGCGAGGAAGGGGAA+GGG | 0.527077 | 3_2:+75793690 | Msa0425410:CDS |
| GTGGAAGGGGAAGGGGCCGT+GGG | 0.527889 | 3_2:+75794424 | Msa0425410:CDS |
| AAACCCACCCACAACACAAA+CGG | 0.530979 | 3_2:+75790370 | Msa0425410:five_prime_UTR |
| GTCATACTGCCCAACTGGCT+GGG | 0.531567 | 3_2:-75794009 | None:intergenic |
| GATAGATACCGTTTGTGTTG+TGG | 0.535421 | 3_2:-75790378 | None:intergenic |
| GTGTTCTTACCACGAGGTGC+AGG | 0.539055 | 3_2:-75794053 | None:intergenic |
| CGTGGTCGTGATGCAGGCCG+TGG | 0.544023 | 3_2:+75794447 | Msa0425410:CDS |
| TCACCAAGGATGCGAGGAAG+GGG | 0.548570 | 3_2:+75793685 | Msa0425410:CDS |
| GAGCTGGATACATCCTCCAC+AGG | 0.550506 | 3_2:+75792539 | Msa0425410:CDS |
| CTCACCAAGGATGCGAGGAA+GGG | 0.551388 | 3_2:+75793684 | Msa0425410:CDS |
| GAATATGGTGATGGTTGGGA+TGG | 0.556459 | 3_2:+75793909 | Msa0425410:CDS |
| GTATGGAATATGGTGATGGT+TGG | 0.556815 | 3_2:+75793904 | Msa0425410:CDS |
| GGCATCAGAGTAGGGTTATG+TGG | 0.556897 | 3_2:-75790253 | None:intergenic |
| ACACATCTGGACCTTCCCAA+TGG | 0.559822 | 3_2:-75790200 | None:intergenic |
| GATGGTGGACGTGGCTATGG+TGG | 0.564025 | 3_2:+75793927 | Msa0425410:CDS |
| GGAAGAAGGCCTTCTTCTAG+TGG | 0.564318 | 3_2:-75792373 | None:intergenic |
| GCCACATACGCCCATTGGGA+AGG | 0.565235 | 3_2:+75790189 | None:intergenic |
| CAACTGATATAACTGACACA+TGG | 0.565866 | 3_2:+75792347 | Msa0425410:CDS |
| GACGTGGCTATGGTGGCAGA+GGG | 0.566506 | 3_2:+75793934 | Msa0425410:CDS |
| AACTACAAAAGCAAAACTGC+AGG | 0.567514 | 3_2:-75794609 | None:intergenic |
| CTGCATCACGACCACGCCCA+CGG | 0.570971 | 3_2:-75794440 | None:intergenic |
| ATACCGTTTGTGTTGTGGGT+GGG | 0.571178 | 3_2:-75790373 | None:intergenic |
| TGTATATGTTCAGTTAGAAG+AGG | 0.578134 | 3_2:+75794504 | Msa0425410:three_prime_UTR |
| AGAGGGCGCGTCCGTGCATG+GGG | 0.580204 | 3_2:+75793951 | Msa0425410:CDS |
| GTTACTAACTTGGAAAAGAG+TGG | 0.580916 | 3_2:-75790623 | None:intergenic |
| AGAGTAGGGTTATGTGGTCG+CGG | 0.583846 | 3_2:-75790247 | None:intergenic |
| TGCAGGCCGAGGTCGTGGAA+GGG | 0.584745 | 3_2:+75794410 | Msa0425410:intron |
| TGAAATTGTTGTCAAAGCAA+TGG | 0.584923 | 3_2:+75792155 | Msa0425410:CDS |
| AATGAATATGAAGACGAAGG+AGG | 0.585192 | 3_2:+75793567 | Msa0425410:CDS |
| TCCTTCCTTGAGTGGTAATG+CGG | 0.591117 | 3_2:-75790576 | None:intergenic |
| ACTTGATCAGCAGGAAGAGG+AGG | 0.596674 | 3_2:-75793534 | None:intergenic |
| TTCTTACCACGAGGTGCAGG+TGG | 0.600530 | 3_2:-75794050 | None:intergenic |
| AACTGATATAACTGACACAT+GGG | 0.600887 | 3_2:+75792348 | Msa0425410:CDS |
| GTATATGTTCAGTTAGAAGA+GGG | 0.601399 | 3_2:+75794505 | Msa0425410:three_prime_UTR |
| GATACCGTTTGTGTTGTGGG+TGG | 0.602155 | 3_2:-75790374 | None:intergenic |
| GAGATCCGCATTACCACTCA+AGG | 0.607382 | 3_2:+75790571 | Msa0425410:CDS |
| ACATGGGAACCACTAGAAGA+AGG | 0.607454 | 3_2:+75792364 | Msa0425410:CDS |
| GATGGATAGGTACCAGAGGG+TGG | 0.622819 | 3_2:+75790513 | Msa0425410:intron |
| TCCGCATTACCACTCAAGGA+AGG | 0.635560 | 3_2:+75790575 | Msa0425410:CDS |
| GAAGGCTCACCAAGGATGCG+AGG | 0.637231 | 3_2:+75793679 | Msa0425410:intron |
| GTGCAGCTGTCTGATCACCT+GGG | 0.641232 | 3_2:+75794469 | Msa0425410:exon |
| TTGAATGAATATGAAGACGA+AGG | 0.641784 | 3_2:+75793564 | Msa0425410:CDS |
| TTTATAGGAATGTACAATGG+GGG | 0.652876 | 3_2:+75793882 | Msa0425410:intron |
| GAAAAGCATGACCCCATGCA+CGG | 0.654179 | 3_2:-75793962 | None:intergenic |
| TGAAAGTACATACCCTGTGG+AGG | 0.656547 | 3_2:-75792552 | None:intergenic |
| TTCAGATGGATAGGTACCAG+AGG | 0.660290 | 3_2:+75790509 | Msa0425410:intron |
| TCAGATGGATAGGTACCAGA+GGG | 0.661722 | 3_2:+75790510 | Msa0425410:intron |
| AATCTGTTGTATGAATAGAA+TGG | 0.663841 | 3_2:-75790292 | None:intergenic |
| TTGAAACAGAAGGCTCACCA+AGG | 0.665147 | 3_2:+75793671 | Msa0425410:intron |
| AGCTGGATACATCCTCCACA+GGG | 0.668533 | 3_2:+75792540 | Msa0425410:CDS |
| CTTTATAGGAATGTACAATG+GGG | 0.683519 | 3_2:+75793881 | Msa0425410:intron |
| GATGCACCACCTGCACCTCG+TGG | 0.692747 | 3_2:+75794044 | Msa0425410:CDS |
| GTGATCAGACAGCTGCACCA+CGG | 0.695771 | 3_2:-75794464 | None:intergenic |
| GAAGGTCCAGATGTGTTAAG+CGG | 0.700508 | 3_2:+75790207 | Msa0425410:five_prime_UTR |
| ATACATGACAACCAACACCC+AGG | 0.707107 | 3_2:-75794486 | None:intergenic |
| TAACAAATAACTAAGCAGAG+AGG | 0.714531 | 3_2:-75794531 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGAAAGAAATTTTTAAA+GGG | - | chr3_2:75791060-75791079 | None:intergenic | 10.0% |
| !!! | AAATTGAAAGAAATTTTTAA+AGG | - | chr3_2:75791061-75791080 | None:intergenic | 10.0% |
| !!! | TAAAAATTTCTTTCAATTTT+TGG | + | chr3_2:75791062-75791081 | Msa0425410:intron | 10.0% |
| !!! | TATTAACTAATGATATTTTT+TGG | - | chr3_2:75791204-75791223 | None:intergenic | 10.0% |
| !!! | TTTTTAATTTTATTCTTTGT+TGG | + | chr3_2:75793467-75793486 | Msa0425410:intron | 10.0% |
| !!! | GTTATTAAAACTTGAATTTT+TGG | - | chr3_2:75790975-75790994 | None:intergenic | 15.0% |
| !!! | TTTAACCCTTTAATTTTTAA+GGG | - | chr3_2:75790998-75791017 | None:intergenic | 15.0% |
| !!! | ATTTAACCCTTTAATTTTTA+AGG | - | chr3_2:75790999-75791018 | None:intergenic | 15.0% |
| !! | ATTGAAAACAAAAAGTTTAA+AGG | - | chr3_2:75791089-75791108 | None:intergenic | 15.0% |
| !! | AAAATTACTTTACTTGAATT+CGG | + | chr3_2:75794264-75794283 | Msa0425410:intron | 15.0% |
| !! | TATAAGACTTAAAAAATTCA+TGG | - | chr3_2:75794807-75794826 | None:intergenic | 15.0% |
| !! | GTATTAATTGAATGAATCTA+GGG | - | chr3_2:75790435-75790454 | None:intergenic | 20.0% |
| !! | AGTATTAATTGAATGAATCT+AGG | - | chr3_2:75790436-75790455 | None:intergenic | 20.0% |
| !! | TTAAGTTATTGTTACTAACT+TGG | - | chr3_2:75790636-75790655 | None:intergenic | 20.0% |
| !!! | AAAACTTGAATTTTTGGTTT+AGG | - | chr3_2:75790969-75790988 | None:intergenic | 20.0% |
| !! | AATAACCCCTTAAAAATTAA+AGG | + | chr3_2:75790989-75791008 | Msa0425410:intron | 20.0% |
| !! | ATAACCCCTTAAAAATTAAA+GGG | + | chr3_2:75790990-75791009 | Msa0425410:intron | 20.0% |
| !!! | TTAACCCTTTAATTTTTAAG+GGG | - | chr3_2:75790997-75791016 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACACTAAAGCA+GGG | - | chr3_2:75791118-75791137 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAACACTAAAGC+AGG | - | chr3_2:75791119-75791138 | None:intergenic | 20.0% |
| !! | ATGTAACAAAAGAAGTTATT+TGG | - | chr3_2:75791168-75791187 | None:intergenic | 20.0% |
| !!! | TTTTATGACATATAACTGAT+AGG | - | chr3_2:75791341-75791360 | None:intergenic | 20.0% |
| !! | ATTGAAATCAGAAAATTTAG+AGG | + | chr3_2:75791399-75791418 | Msa0425410:intron | 20.0% |
| !! | ATTAAGTAAACATTAACCAA+CGG | - | chr3_2:75792012-75792031 | None:intergenic | 20.0% |
| !! | GCTAAATATATAGTTAAGAA+TGG | + | chr3_2:75792829-75792848 | Msa0425410:intron | 20.0% |
| !!! | AATAATTTTTATCTTGCTAC+AGG | + | chr3_2:75792865-75792884 | Msa0425410:intron | 20.0% |
| !! | TTCGATATTAAAAAGACAAA+GGG | - | chr3_2:75793072-75793091 | None:intergenic | 20.0% |
| !!! | GTTTATGTATTTTAGAAACA+AGG | + | chr3_2:75793101-75793120 | Msa0425410:intron | 20.0% |
| !! | TAAAGATAAAATAAGTACAG+AGG | - | chr3_2:75793281-75793300 | None:intergenic | 20.0% |
| !!! | CTGTACTTATTTTATCTTTA+TGG | + | chr3_2:75793281-75793300 | Msa0425410:intron | 20.0% |
| !!! | TCTGTTTTCTGTAATTATTA+AGG | + | chr3_2:75793375-75793394 | Msa0425410:intron | 20.0% |
| !!! | AACTATAATTTTGAAACAGA+AGG | + | chr3_2:75793661-75793680 | Msa0425410:intron | 20.0% |
| !! | AAAATAAGAAGATAACACAA+GGG | - | chr3_2:75794325-75794344 | None:intergenic | 20.0% |
| !!! | TCTATCTATACTTTTAAGTT+AGG | + | chr3_2:75794649-75794668 | Msa0425410:three_prime_UTR | 20.0% |
| ! | AATCTGTTGTATGAATAGAA+TGG | - | chr3_2:75790295-75790314 | None:intergenic | 25.0% |
| !!! | TTTGATTTTGTCAATTCAGA+TGG | + | chr3_2:75790495-75790514 | Msa0425410:intron | 25.0% |
| ! | AAAGCATATAGAACAAAATG+TGG | - | chr3_2:75790877-75790896 | None:intergenic | 25.0% |
| !! | AAAAAGGTATAAAGGATACA+AGG | - | chr3_2:75790946-75790965 | None:intergenic | 25.0% |
| !!! | GAATTTTTGGTTTAGGAAAA+AGG | - | chr3_2:75790962-75790981 | None:intergenic | 25.0% |
| ! | GTAAAGGTGATATATTTAGA+GGG | - | chr3_2:75791029-75791048 | None:intergenic | 25.0% |
| !! | ACAAAAATTCCTTCGATTTT+TGG | - | chr3_2:75791426-75791445 | None:intergenic | 25.0% |
| !! | AAAATCGAAGGAATTTTTGT+AGG | + | chr3_2:75791426-75791445 | Msa0425410:intron | 25.0% |
| !! | AAATCGAAGGAATTTTTGTA+GGG | + | chr3_2:75791427-75791446 | Msa0425410:intron | 25.0% |
| !!! | CTTAAAGTTGGTATATTTAG+AGG | + | chr3_2:75791457-75791476 | Msa0425410:intron | 25.0% |
| !!! | TGGTTTTATATAAATGTGAC+CGG | - | chr3_2:75791592-75791611 | None:intergenic | 25.0% |
| ! | AAATACAATAAACCTAGACA+AGG | + | chr3_2:75791637-75791656 | Msa0425410:intron | 25.0% |
| ! | AATACAATAAACCTAGACAA+GGG | + | chr3_2:75791638-75791657 | Msa0425410:intron | 25.0% |
| ! | AGTGAAAATAAGAAAGTGAT+GGG | - | chr3_2:75791956-75791975 | None:intergenic | 25.0% |
| ! | AAGTGAAAATAAGAAAGTGA+TGG | - | chr3_2:75791957-75791976 | None:intergenic | 25.0% |
| ! | AAAATAACTAAGCCTATCAA+GGG | - | chr3_2:75792633-75792652 | None:intergenic | 25.0% |
| ! | AAAAATAACTAAGCCTATCA+AGG | - | chr3_2:75792634-75792653 | None:intergenic | 25.0% |
| ! | CAAATCTTACAGAATTACAA+CGG | - | chr3_2:75792794-75792813 | None:intergenic | 25.0% |
| ! | GTTGTAATTCTGTAAGATTT+GGG | + | chr3_2:75792793-75792812 | Msa0425410:intron | 25.0% |
| ! | TTGTAATTCTGTAAGATTTG+GGG | + | chr3_2:75792794-75792813 | Msa0425410:intron | 25.0% |
| !!! | TTTTAAAAGCTCAGAAATTG+TGG | - | chr3_2:75792969-75792988 | None:intergenic | 25.0% |
| ! | TCGATATTAAAAAGACAAAG+GGG | - | chr3_2:75793071-75793090 | None:intergenic | 25.0% |
| ! | GTTCGATATTAAAAAGACAA+AGG | - | chr3_2:75793073-75793092 | None:intergenic | 25.0% |
| ! | TTACTTGAATGTGTTATCTT+TGG | + | chr3_2:75793149-75793168 | Msa0425410:intron | 25.0% |
| !! | TTTGATTGCTATTAATGCAT+TGG | + | chr3_2:75793334-75793353 | Msa0425410:intron | 25.0% |
| ! | TTTGCTTACTTAACTGTAAT+CGG | + | chr3_2:75793762-75793781 | Msa0425410:intron | 25.0% |
| ! | CTACACAATCTATTCTTTAT+AGG | + | chr3_2:75793867-75793886 | Msa0425410:intron | 25.0% |
| ! | TTCTTTATAGGAATGTACAA+TGG | + | chr3_2:75793879-75793898 | Msa0425410:intron | 25.0% |
| ! | TCTTTATAGGAATGTACAAT+GGG | + | chr3_2:75793880-75793899 | Msa0425410:intron | 25.0% |
| !! | TATCTTGAAACCTGAATTTT+GGG | - | chr3_2:75794084-75794103 | None:intergenic | 25.0% |
| !! | ATATCTTGAAACCTGAATTT+TGG | - | chr3_2:75794085-75794104 | None:intergenic | 25.0% |
| ! | CAAAATAAGAAGATAACACA+AGG | - | chr3_2:75794326-75794345 | None:intergenic | 25.0% |
| !!! | CTTGTGTTATCTTCTTATTT+TGG | + | chr3_2:75794324-75794343 | Msa0425410:intron | 25.0% |
| !!! | TGTTAGATTTGCTTTTAGTT+TGG | + | chr3_2:75794549-75794568 | Msa0425410:three_prime_UTR | 25.0% |
| ! | TTTTGTCAATTCAGATGGAT+AGG | + | chr3_2:75790500-75790519 | Msa0425410:intron | 30.0% |
| TTAATTGGACTATCTGCTTT+GGG | - | chr3_2:75790544-75790563 | None:intergenic | 30.0% | |
| ATTCAATGTCAATACATGCA+TGG | + | chr3_2:75790717-75790736 | Msa0425410:intron | 30.0% | |
| TTCAATGTCAATACATGCAT+GGG | + | chr3_2:75790718-75790737 | Msa0425410:intron | 30.0% | |
| !! | AAGAAGTGTATGTGTTTTAG+AGG | + | chr3_2:75790755-75790774 | Msa0425410:intron | 30.0% |
| CTGAAAACACAAATTTCACT+TGG | - | chr3_2:75790840-75790859 | None:intergenic | 30.0% | |
| ! | GGTTTAGGAAAAAGGTATAA+AGG | - | chr3_2:75790954-75790973 | None:intergenic | 30.0% |
| CGTAAAGGTGATATATTTAG+AGG | - | chr3_2:75791030-75791049 | None:intergenic | 30.0% | |
| TTAAAGGGACTAAAACGTAA+AGG | - | chr3_2:75791045-75791064 | None:intergenic | 30.0% | |
| ATAGGACGTTAAAATAGCAT+TGG | - | chr3_2:75791323-75791342 | None:intergenic | 30.0% | |
| TGTCATAAAAAAATGTCGCT+TGG | + | chr3_2:75791351-75791370 | Msa0425410:intron | 30.0% | |
| TAGGGACTAAAACTTAAAGT+TGG | + | chr3_2:75791445-75791464 | Msa0425410:intron | 30.0% | |
| GATGCTATGTTTCAATCATT+TGG | - | chr3_2:75791612-75791631 | None:intergenic | 30.0% | |
| ATGATTGAAACATAGCATCA+TGG | + | chr3_2:75791613-75791632 | Msa0425410:intron | 30.0% | |
| ! | ATCACTTCTGTTTTCTATCT+TGG | - | chr3_2:75791779-75791798 | None:intergenic | 30.0% |
| AAGATAGAAAACAGAAGTGA+TGG | + | chr3_2:75791778-75791797 | Msa0425410:intron | 30.0% | |
| !!! | TGTCTAATATGCCATTTTTG+TGG | - | chr3_2:75791890-75791909 | None:intergenic | 30.0% |
| TGAAAATAAGAAAGTGATGG+GGG | - | chr3_2:75791954-75791973 | None:intergenic | 30.0% | |
| GTGAAAATAAGAAAGTGATG+GGG | - | chr3_2:75791955-75791974 | None:intergenic | 30.0% | |
| TGAAATTGTTGTCAAAGCAA+TGG | + | chr3_2:75792155-75792174 | Msa0425410:CDS | 30.0% | |
| GAAATTGTTGTCAAAGCAAT+GGG | + | chr3_2:75792156-75792175 | Msa0425410:CDS | 30.0% | |
| AATGATTACCGAGCTAATAA+AGG | + | chr3_2:75792200-75792219 | Msa0425410:CDS | 30.0% | |
| AACTGATATAACTGACACAT+GGG | + | chr3_2:75792348-75792367 | Msa0425410:CDS | 30.0% | |
| TCAAATGATTTATGTGTGCA+TGG | + | chr3_2:75792428-75792447 | Msa0425410:intron | 30.0% | |
| CAAATGATTTATGTGTGCAT+GGG | + | chr3_2:75792429-75792448 | Msa0425410:intron | 30.0% | |
| CGTTGTAATTCTGTAAGATT+TGG | + | chr3_2:75792792-75792811 | Msa0425410:intron | 30.0% | |
| TGTTGAATCAGAATTGAGAA+AGG | + | chr3_2:75792926-75792945 | Msa0425410:intron | 30.0% | |
| ATTGTGGTTCAATAAAACCT+TGG | - | chr3_2:75792953-75792972 | None:intergenic | 30.0% | |
| CATACTTGTAAATCATGACT+GGG | - | chr3_2:75793401-75793420 | None:intergenic | 30.0% | |
| TCGTCTTCATATTCATTCAA+AGG | - | chr3_2:75793564-75793583 | None:intergenic | 30.0% | |
| TTGAATGAATATGAAGACGA+AGG | + | chr3_2:75793564-75793583 | Msa0425410:CDS | 30.0% | |
| CTTTATAGGAATGTACAATG+GGG | + | chr3_2:75793881-75793900 | Msa0425410:intron | 30.0% | |
| TTTATAGGAATGTACAATGG+GGG | + | chr3_2:75793882-75793901 | Msa0425410:intron | 30.0% | |
| ! | ATCTTGAAACCTGAATTTTG+GGG | - | chr3_2:75794083-75794102 | None:intergenic | 30.0% |
| TCTTATGTAGCCTGATTTAA+TGG | - | chr3_2:75794245-75794264 | None:intergenic | 30.0% | |
| AAGGAAATTAACATACGACA+AGG | - | chr3_2:75794300-75794319 | None:intergenic | 30.0% | |
| TTGTCGTATGTTAATTTCCT+TGG | + | chr3_2:75794299-75794318 | Msa0425410:intron | 30.0% | |
| GTCGTTCTATACATTACTTA+AGG | + | chr3_2:75794359-75794378 | Msa0425410:intron | 30.0% | |
| TGTATATGTTCAGTTAGAAG+AGG | + | chr3_2:75794504-75794523 | Msa0425410:three_prime_UTR | 30.0% | |
| GTATATGTTCAGTTAGAAGA+GGG | + | chr3_2:75794505-75794524 | Msa0425410:three_prime_UTR | 30.0% | |
| TAACAAATAACTAAGCAGAG+AGG | - | chr3_2:75794534-75794553 | None:intergenic | 30.0% | |
| !!! | TCTATACTTTTAAGTTAGGC+AGG | + | chr3_2:75794653-75794672 | Msa0425410:three_prime_UTR | 30.0% |
| ATTATACCGCTTAACACATC+TGG | - | chr3_2:75790216-75790235 | None:intergenic | 35.0% | |
| GATGTGTTAAGCGGTATAAT+AGG | + | chr3_2:75790216-75790235 | Msa0425410:five_prime_UTR | 35.0% | |
| !! | ATGAAAAAGGCATCAGAGTA+GGG | - | chr3_2:75790264-75790283 | None:intergenic | 35.0% |
| AATGGTGAAGCAGATGAAAA+AGG | - | chr3_2:75790277-75790296 | None:intergenic | 35.0% | |
| ATAGATACCGTTTGTGTTGT+GGG | - | chr3_2:75790380-75790399 | None:intergenic | 35.0% | |
| GTTAATTGGACTATCTGCTT+TGG | - | chr3_2:75790545-75790564 | None:intergenic | 35.0% | |
| GTTACTAACTTGGAAAAGAG+TGG | - | chr3_2:75790626-75790645 | None:intergenic | 35.0% | |
| AACCAAAGAACAAGCAAATC+AGG | - | chr3_2:75790793-75790812 | None:intergenic | 35.0% | |
| GTTCTTTGGTTGAAATAGCT+TGG | + | chr3_2:75790802-75790821 | Msa0425410:intron | 35.0% | |
| TTGGTTGAAATAGCTTGGAT+TGG | + | chr3_2:75790807-75790826 | Msa0425410:intron | 35.0% | |
| GGAACATGAAACGTAAACAT+TGG | - | chr3_2:75791147-75791166 | None:intergenic | 35.0% | |
| TTTAGAGGACCAAAAATCGA+AGG | + | chr3_2:75791414-75791433 | Msa0425410:intron | 35.0% | |
| ATTTCTATTCACCCTTGTCT+AGG | - | chr3_2:75791652-75791671 | None:intergenic | 35.0% | |
| ACAATATCATGTAAAGAGCC+TGG | + | chr3_2:75791672-75791691 | Msa0425410:intron | 35.0% | |
| ! | ATTGTTACTCTCCTTTTACC+AGG | - | chr3_2:75791693-75791712 | None:intergenic | 35.0% |
| !! | CTGACAGTCTATTTCTATCT+TGG | - | chr3_2:75791827-75791846 | None:intergenic | 35.0% |
| ! | CATTTTTGTGGAGTTGACTA+AGG | - | chr3_2:75791878-75791897 | None:intergenic | 35.0% |
| CTTAGTCAACTCCACAAAAA+TGG | + | chr3_2:75791876-75791895 | Msa0425410:intron | 35.0% | |
| ! | GTATATTTTCGTTCTTCCGT+TGG | + | chr3_2:75791993-75792012 | Msa0425410:intron | 35.0% |
| ! | TCAACATGTGTGTTTTCTGT+AGG | + | chr3_2:75792119-75792138 | Msa0425410:intron | 35.0% |
| ATTACCGAGCTAATAAAGGT+GGG | + | chr3_2:75792204-75792223 | Msa0425410:intron | 35.0% | |
| GATATCTCTATCCAGTGAAT+TGG | + | chr3_2:75792232-75792251 | Msa0425410:intron | 35.0% | |
| AAAAATGCCAACCAATTCAC+TGG | - | chr3_2:75792246-75792265 | None:intergenic | 35.0% | |
| CTTTCTACTTGTTTCAGAGA+AGG | + | chr3_2:75792290-75792309 | Msa0425410:intron | 35.0% | |
| TTGTTTCAGAGAAGGATTGT+TGG | + | chr3_2:75792298-75792317 | Msa0425410:intron | 35.0% | |
| CAACTGATATAACTGACACA+TGG | + | chr3_2:75792347-75792366 | Msa0425410:CDS | 35.0% | |
| AGAGGAAACAAAAAGCCATA+CGG | - | chr3_2:75792397-75792416 | None:intergenic | 35.0% | |
| CATTTGACAAGATAGCATAG+AGG | - | chr3_2:75792415-75792434 | None:intergenic | 35.0% | |
| ! | TGTGTTTTACTTGCTCAGTT+TGG | + | chr3_2:75792469-75792488 | Msa0425410:intron | 35.0% |
| TGTTCACAAAACAAAGAGAC+GGG | - | chr3_2:75793048-75793067 | None:intergenic | 35.0% | |
| GTGTTCACAAAACAAAGAGA+CGG | - | chr3_2:75793049-75793068 | None:intergenic | 35.0% | |
| GCAATCAAAAGCGAAACTAA+AGG | - | chr3_2:75793323-75793342 | None:intergenic | 35.0% | |
| CCATACTTGTAAATCATGAC+TGG | - | chr3_2:75793402-75793421 | None:intergenic | 35.0% | |
| CCAGTCATGATTTACAAGTA+TGG | + | chr3_2:75793399-75793418 | Msa0425410:intron | 35.0% | |
| ! | AAAGGTTTTACTTGATCAGC+AGG | - | chr3_2:75793546-75793565 | None:intergenic | 35.0% |
| AATGAATATGAAGACGAAGG+AGG | + | chr3_2:75793567-75793586 | Msa0425410:CDS | 35.0% | |
| !! | TATGGAATATGGTGATGGTT+GGG | + | chr3_2:75793905-75793924 | Msa0425410:CDS | 35.0% |
| GATTAATACCAGTTATGTGC+TGG | + | chr3_2:75794153-75794172 | Msa0425410:intron | 35.0% | |
| CATGATGCTTCCATTAAATC+AGG | + | chr3_2:75794232-75794251 | Msa0425410:intron | 35.0% | |
| !! | ATTTCTGTTTGATGATGTGC+AGG | + | chr3_2:75794393-75794412 | Msa0425410:intron | 35.0% |
| AACTACAAAAGCAAAACTGC+AGG | - | chr3_2:75794612-75794631 | None:intergenic | 35.0% | |
| !! | GATGAAAAAGGCATCAGAGT+AGG | - | chr3_2:75790265-75790284 | None:intergenic | 40.0% |
| GATAGATACCGTTTGTGTTG+TGG | - | chr3_2:75790381-75790400 | None:intergenic | 40.0% | |
| CGGATCTCATTCTCGTTAAT+TGG | - | chr3_2:75790559-75790578 | None:intergenic | 40.0% | |
| !! | TGCCTGATTTGCTTGTTCTT+TGG | + | chr3_2:75790788-75790807 | Msa0425410:intron | 40.0% |
| AGTGTACTGTCTAGAAAGAC+CGG | + | chr3_2:75791570-75791589 | Msa0425410:intron | 40.0% | |
| CATGTAAAGAGCCTGGTAAA+AGG | + | chr3_2:75791679-75791698 | Msa0425410:intron | 40.0% | |
| ! | AAATAGACTGTCAGAGCATC+TGG | + | chr3_2:75791833-75791852 | Msa0425410:intron | 40.0% |
| ! | CTGGTACCATCTTAGGTTTT+AGG | + | chr3_2:75791852-75791871 | Msa0425410:intron | 40.0% |
| CTAAGGCCTAAAACCTAAGA+TGG | - | chr3_2:75791861-75791880 | None:intergenic | 40.0% | |
| ACACTATCTTCAGTCGTTGT+GGG | + | chr3_2:75791907-75791926 | Msa0425410:intron | 40.0% | |
| ! | AAATAAGAAAGTGATGGGGG+AGG | - | chr3_2:75791951-75791970 | None:intergenic | 40.0% |
| ! | GTGTGTTTTCTGTAGGAGAA+AGG | + | chr3_2:75792126-75792145 | Msa0425410:intron | 40.0% |
| GATTACCGAGCTAATAAAGG+TGG | + | chr3_2:75792203-75792222 | Msa0425410:intron | 40.0% | |
| TTACCGAGCTAATAAAGGTG+GGG | + | chr3_2:75792205-75792224 | Msa0425410:intron | 40.0% | |
| TCTCTATCCAGTGAATTGGT+TGG | + | chr3_2:75792236-75792255 | Msa0425410:intron | 40.0% | |
| CTGCATCAGAACACTCAAAT+TGG | + | chr3_2:75792322-75792341 | Msa0425410:CDS | 40.0% | |
| ACAAAAAGCCATACGGAAGA+AGG | - | chr3_2:75792390-75792409 | None:intergenic | 40.0% | |
| TACGTTGTCAAAGAAAGAGC+TGG | + | chr3_2:75792523-75792542 | Msa0425410:CDS | 40.0% | |
| ! | TCATGAAAGTACATACCCTG+TGG | - | chr3_2:75792558-75792577 | None:intergenic | 40.0% |
| TAGATGCCTTATCCCTTGAT+AGG | + | chr3_2:75792618-75792637 | Msa0425410:intron | 40.0% | |
| ACTAAGCCTATCAAGGGATA+AGG | - | chr3_2:75792627-75792646 | None:intergenic | 40.0% | |
| CTTACAGAATTACAACGGCT+AGG | - | chr3_2:75792789-75792808 | None:intergenic | 40.0% | |
| ! | TTCTGTAAGATTTGGGGTCA+CGG | + | chr3_2:75792800-75792819 | Msa0425410:intron | 40.0% |
| TCAGAATTGAGAAAGGACCA+AGG | + | chr3_2:75792933-75792952 | Msa0425410:intron | 40.0% | |
| ! | ACCTTTGACTTCAAACAGAG+CGG | + | chr3_2:75793235-75793254 | Msa0425410:intron | 40.0% |
| GATATCTGCATGAGGAAATC+AGG | - | chr3_2:75793512-75793531 | None:intergenic | 40.0% | |
| TTTACTTGATCAGCAGGAAG+AGG | - | chr3_2:75793540-75793559 | None:intergenic | 40.0% | |
| ! | TACAATGGGGGTATGGAATA+TGG | + | chr3_2:75793894-75793913 | Msa0425410:CDS | 40.0% |
| !! | GTATGGAATATGGTGATGGT+TGG | + | chr3_2:75793904-75793923 | Msa0425410:CDS | 40.0% |
| ! | TAAGTTAGGCAGGTTGAGTT+AGG | + | chr3_2:75794663-75794682 | Msa0425410:three_prime_UTR | 40.0% |
| GAAGGTCCAGATGTGTTAAG+CGG | + | chr3_2:75790207-75790226 | Msa0425410:five_prime_UTR | 45.0% | |
| ! | TTTGTGTTGTGGGTGGGTTT+GGG | - | chr3_2:75790370-75790389 | None:intergenic | 45.0% |
| AAACCCACCCACAACACAAA+CGG | + | chr3_2:75790370-75790389 | Msa0425410:five_prime_UTR | 45.0% | |
| ATACCGTTTGTGTTGTGGGT+GGG | - | chr3_2:75790376-75790395 | None:intergenic | 45.0% | |
| TTCAGATGGATAGGTACCAG+AGG | + | chr3_2:75790509-75790528 | Msa0425410:intron | 45.0% | |
| TCAGATGGATAGGTACCAGA+GGG | + | chr3_2:75790510-75790529 | Msa0425410:intron | 45.0% | |
| ! | TCCTTCCTTGAGTGGTAATG+CGG | - | chr3_2:75790579-75790598 | None:intergenic | 45.0% |
| GTTTCTCATCCTTCCTTGAG+TGG | - | chr3_2:75790587-75790606 | None:intergenic | 45.0% | |
| ! | AGAGCATCTGGTACCATCTT+AGG | + | chr3_2:75791845-75791864 | Msa0425410:intron | 45.0% |
| GACACTATCTTCAGTCGTTG+TGG | + | chr3_2:75791906-75791925 | Msa0425410:intron | 45.0% | |
| ! | AAGTGATGGGGGAGGATATT+GGG | - | chr3_2:75791943-75791962 | None:intergenic | 45.0% |
| ! | AAAGTGATGGGGGAGGATAT+TGG | - | chr3_2:75791944-75791963 | None:intergenic | 45.0% |
| TACCGAGCTAATAAAGGTGG+GGG | + | chr3_2:75792206-75792225 | Msa0425410:intron | 45.0% | |
| ACATGGGAACCACTAGAAGA+AGG | + | chr3_2:75792364-75792383 | Msa0425410:CDS | 45.0% | |
| ! | GTGCATGGGTGTGATTGTTT+TGG | + | chr3_2:75792443-75792462 | Msa0425410:intron | 45.0% |
| ! | TGAAAGTACATACCCTGTGG+AGG | - | chr3_2:75792555-75792574 | None:intergenic | 45.0% |
| ACAAAACAAAGAGACGGGTG+AGG | - | chr3_2:75793043-75793062 | None:intergenic | 45.0% | |
| ! | ACCGCTCTGTTTGAAGTCAA+AGG | - | chr3_2:75793239-75793258 | None:intergenic | 45.0% |
| !! | AGGAGGTTGATATCTGCATG+AGG | - | chr3_2:75793520-75793539 | None:intergenic | 45.0% |
| TTGAAACAGAAGGCTCACCA+AGG | + | chr3_2:75793671-75793690 | Msa0425410:intron | 45.0% | |
| AGGAATGTACAATGGGGGTA+TGG | + | chr3_2:75793887-75793906 | Msa0425410:intron | 45.0% | |
| !! | GAATATGGTGATGGTTGGGA+TGG | + | chr3_2:75793909-75793928 | Msa0425410:CDS | 45.0% |
| AACACTTGGCCCCAAAATTC+AGG | + | chr3_2:75794071-75794090 | Msa0425410:intron | 45.0% | |
| AGAAGATAACACAAGGGCCA+AGG | - | chr3_2:75794319-75794338 | None:intergenic | 45.0% | |
| ATACATGACAACCAACACCC+AGG | - | chr3_2:75794489-75794508 | None:intergenic | 45.0% | |
| CACATCTGGACCTTCCCAAT+GGG | - | chr3_2:75790202-75790221 | None:intergenic | 50.0% | |
| ACACATCTGGACCTTCCCAA+TGG | - | chr3_2:75790203-75790222 | None:intergenic | 50.0% | |
| AGAGTAGGGTTATGTGGTCG+CGG | - | chr3_2:75790250-75790269 | None:intergenic | 50.0% | |
| GGCATCAGAGTAGGGTTATG+TGG | - | chr3_2:75790256-75790275 | None:intergenic | 50.0% | |
| TTTGGGCGAATACGGGGATA+TGG | - | chr3_2:75790353-75790372 | None:intergenic | 50.0% | |
| ! | GTTTGTGTTGTGGGTGGGTT+TGG | - | chr3_2:75790371-75790390 | None:intergenic | 50.0% |
| GATACCGTTTGTGTTGTGGG+TGG | - | chr3_2:75790377-75790396 | None:intergenic | 50.0% | |
| GAGATCCGCATTACCACTCA+AGG | + | chr3_2:75790571-75790590 | Msa0425410:CDS | 50.0% | |
| TCCGCATTACCACTCAAGGA+AGG | + | chr3_2:75790575-75790594 | Msa0425410:CDS | 50.0% | |
| ! | TACATGCATGGGTGTCGTGT+TGG | + | chr3_2:75790729-75790748 | Msa0425410:intron | 50.0% |
| TCTTCAGTCGTTGTGGGACT+TGG | + | chr3_2:75791913-75791932 | Msa0425410:intron | 50.0% | |
| ACCGAGCTAATAAAGGTGGG+GGG | + | chr3_2:75792207-75792226 | Msa0425410:intron | 50.0% | |
| ACCCCCCACCTTTATTAGCT+CGG | - | chr3_2:75792211-75792230 | None:intergenic | 50.0% | |
| GGAAGAAGGCCTTCTTCTAG+TGG | - | chr3_2:75792376-75792395 | None:intergenic | 50.0% | |
| GAAGAAGGCCTTCTTCCGTA+TGG | + | chr3_2:75792379-75792398 | Msa0425410:intron | 50.0% | |
| AGCTGGATACATCCTCCACA+GGG | + | chr3_2:75792540-75792559 | Msa0425410:CDS | 50.0% | |
| AACAAAGAGACGGGTGAGGT+GGG | - | chr3_2:75793039-75793058 | None:intergenic | 50.0% | |
| AAACAAAGAGACGGGTGAGG+TGG | - | chr3_2:75793040-75793059 | None:intergenic | 50.0% | |
| ACTTGATCAGCAGGAAGAGG+AGG | - | chr3_2:75793537-75793556 | None:intergenic | 50.0% | |
| ! | GGGGGTATGGAATATGGTGA+TGG | + | chr3_2:75793900-75793919 | Msa0425410:CDS | 50.0% |
| !! | TATGGTGATGGTTGGGATGG+TGG | + | chr3_2:75793912-75793931 | Msa0425410:CDS | 50.0% |
| ! | GAAAAGCATGACCCCATGCA+CGG | - | chr3_2:75793965-75793984 | None:intergenic | 50.0% |
| CCATAGTCATACTGCCCAAC+TGG | - | chr3_2:75794017-75794036 | None:intergenic | 50.0% | |
| CCAGTTGGGCAGTATGACTA+TGG | + | chr3_2:75794014-75794033 | Msa0425410:CDS | 50.0% | |
| CACCTCGTGGTAAGAACACT+TGG | + | chr3_2:75794057-75794076 | Msa0425410:intron | 50.0% | |
| TCGCTATGCCAGCACATAAC+TGG | - | chr3_2:75794164-75794183 | None:intergenic | 50.0% | |
| ! | TGGGTGGGTTTGGGCGAATA+CGG | - | chr3_2:75790361-75790380 | None:intergenic | 55.0% |
| GATGGATAGGTACCAGAGGG+TGG | + | chr3_2:75790513-75790532 | Msa0425410:intron | 55.0% | |
| ! | CTTTGGGTTTCTCCACCCTC+TGG | - | chr3_2:75790528-75790547 | None:intergenic | 55.0% |
| GAGCTGGATACATCCTCCAC+AGG | + | chr3_2:75792539-75792558 | Msa0425410:CDS | 55.0% | |
| GGTGAGGTGGGGGATAGATA+AGG | - | chr3_2:75793027-75793046 | None:intergenic | 55.0% | |
| ACAAAGAGACGGGTGAGGTG+GGG | - | chr3_2:75793038-75793057 | None:intergenic | 55.0% | |
| CTCACCAAGGATGCGAGGAA+GGG | + | chr3_2:75793684-75793703 | Msa0425410:CDS | 55.0% | |
| TCACCAAGGATGCGAGGAAG+GGG | + | chr3_2:75793685-75793704 | Msa0425410:CDS | 55.0% | |
| AAGGATGCGAGGAAGGGGAA+GGG | + | chr3_2:75793690-75793709 | Msa0425410:CDS | 55.0% | |
| ! | GCATGGGGTCATGCTTTTCG+TGG | + | chr3_2:75793966-75793985 | Msa0425410:CDS | 55.0% |
| ! | GGGGTCATGCTTTTCGTGGA+CGG | + | chr3_2:75793970-75793989 | Msa0425410:CDS | 55.0% |
| ! | GGGTCATGCTTTTCGTGGAC+GGG | + | chr3_2:75793971-75793990 | Msa0425410:CDS | 55.0% |
| ! | GGTCATGCTTTTCGTGGACG+GGG | + | chr3_2:75793972-75793991 | Msa0425410:CDS | 55.0% |
| ! | ATGCTTTTCGTGGACGGGGA+CGG | + | chr3_2:75793976-75793995 | Msa0425410:CDS | 55.0% |
| GTCATACTGCCCAACTGGCT+GGG | - | chr3_2:75794012-75794031 | None:intergenic | 55.0% | |
| AGTCATACTGCCCAACTGGC+TGG | - | chr3_2:75794013-75794032 | None:intergenic | 55.0% | |
| TTCTTACCACGAGGTGCAGG+TGG | - | chr3_2:75794053-75794072 | None:intergenic | 55.0% | |
| GTGTTCTTACCACGAGGTGC+AGG | - | chr3_2:75794056-75794075 | None:intergenic | 55.0% | |
| GGCCAAGTGTTCTTACCACG+AGG | - | chr3_2:75794062-75794081 | None:intergenic | 55.0% | |
| !! | GTTTGATGATGTGCAGGCCG+AGG | + | chr3_2:75794399-75794418 | Msa0425410:intron | 55.0% |
| GTGATCAGACAGCTGCACCA+CGG | - | chr3_2:75794467-75794486 | None:intergenic | 55.0% | |
| GTGCAGCTGTCTGATCACCT+GGG | + | chr3_2:75794469-75794488 | Msa0425410:exon | 55.0% | |
| CTGTCTGATCACCTGGGTGT+TGG | + | chr3_2:75794475-75794494 | Msa0425410:exon | 55.0% | |
| ! | GGTGGGTTTGGGCGAATACG+GGG | - | chr3_2:75790359-75790378 | None:intergenic | 60.0% |
| ! | GGGTGGGTTTGGGCGAATAC+GGG | - | chr3_2:75790360-75790379 | None:intergenic | 60.0% |
| CAAAGAGACGGGTGAGGTGG+GGG | - | chr3_2:75793037-75793056 | None:intergenic | 60.0% | |
| GAAGGCTCACCAAGGATGCG+AGG | + | chr3_2:75793679-75793698 | Msa0425410:intron | 60.0% | |
| GCTCACCAAGGATGCGAGGA+AGG | + | chr3_2:75793683-75793702 | Msa0425410:CDS | 60.0% | |
| CTTCCCCTTCCTCGCATCCT+TGG | - | chr3_2:75793691-75793710 | None:intergenic | 60.0% | |
| CAAGGATGCGAGGAAGGGGA+AGG | + | chr3_2:75793689-75793708 | Msa0425410:CDS | 60.0% | |
| AGGATGCGAGGAAGGGGAAG+GGG | + | chr3_2:75793691-75793710 | Msa0425410:CDS | 60.0% | |
| AAGGGGAAGGGGTCGTGGAA+GGG | + | chr3_2:75793702-75793721 | Msa0425410:CDS | 60.0% | |
| !! | GATGGTTGGGATGGTGGACG+TGG | + | chr3_2:75793918-75793937 | Msa0425410:CDS | 60.0% |
| !! | TGGGATGGTGGACGTGGCTA+TGG | + | chr3_2:75793924-75793943 | Msa0425410:CDS | 60.0% |
| !! | GATGGTGGACGTGGCTATGG+TGG | + | chr3_2:75793927-75793946 | Msa0425410:CDS | 60.0% |
| GACGTGGCTATGGTGGCAGA+GGG | + | chr3_2:75793934-75793953 | Msa0425410:CDS | 60.0% | |
| ! | TGCTTTTCGTGGACGGGGAC+GGG | + | chr3_2:75793977-75793996 | Msa0425410:CDS | 60.0% |
| GCTATGGTGCCCAGCCAGTT+GGG | + | chr3_2:75794000-75794019 | Msa0425410:CDS | 60.0% | |
| GGTGCAGCTGTCTGATCACC+TGG | + | chr3_2:75794468-75794487 | Msa0425410:exon | 60.0% | |
| GAAGGGGAAGGGGTCGTGGA+AGG | + | chr3_2:75793701-75793720 | Msa0425410:CDS | 65.0% | |
| AGGGGAAGGGGTCGTGGAAG+GGG | + | chr3_2:75793703-75793722 | Msa0425410:CDS | 65.0% | |
| AAGGGGTCGTGGAAGGGGCA+GGG | + | chr3_2:75793708-75793727 | Msa0425410:CDS | 65.0% | |
| AGGGGCAGGGGTAGAGGTAG+AGG | + | chr3_2:75793721-75793740 | Msa0425410:CDS | 65.0% | |
| GGACGTGGCTATGGTGGCAG+AGG | + | chr3_2:75793933-75793952 | Msa0425410:CDS | 65.0% | |
| ! | GCTTTTCGTGGACGGGGACG+GGG | + | chr3_2:75793978-75793997 | Msa0425410:CDS | 65.0% |
| GGCTATGGTGCCCAGCCAGT+TGG | + | chr3_2:75793999-75794018 | Msa0425410:CDS | 65.0% | |
| GATGCACCACCTGCACCTCG+TGG | + | chr3_2:75794044-75794063 | Msa0425410:CDS | 65.0% | |
| TGATGTGCAGGCCGAGGTCG+TGG | + | chr3_2:75794405-75794424 | Msa0425410:intron | 65.0% | |
| TGCAGGCCGAGGTCGTGGAA+GGG | + | chr3_2:75794410-75794429 | Msa0425410:intron | 65.0% | |
| CCCTTCCCCTTCCACGACCT+CGG | - | chr3_2:75794419-75794438 | None:intergenic | 65.0% | |
| CCGAGGTCGTGGAAGGGGAA+GGG | + | chr3_2:75794416-75794435 | Msa0425410:CDS | 65.0% | |
| CGAGGTCGTGGAAGGGGAAG+GGG | + | chr3_2:75794417-75794436 | Msa0425410:CDS | 65.0% | |
| CTGCATCACGACCACGCCCA+CGG | - | chr3_2:75794443-75794462 | None:intergenic | 65.0% | |
| CGAGGAAGGGGAAGGGGTCG+TGG | + | chr3_2:75793697-75793716 | Msa0425410:CDS | 70.0% | |
| GAAGGGGTCGTGGAAGGGGC+AGG | + | chr3_2:75793707-75793726 | Msa0425410:CDS | 70.0% | |
| AGGGGTCGTGGAAGGGGCAG+GGG | + | chr3_2:75793709-75793728 | Msa0425410:CDS | 70.0% | |
| CGTGGAAGGGGCAGGGGTAG+AGG | + | chr3_2:75793715-75793734 | Msa0425410:CDS | 70.0% | |
| ! | CAGAGGGCGCGTCCGTGCAT+GGG | + | chr3_2:75793950-75793969 | Msa0425410:CDS | 70.0% |
| ! | AGAGGGCGCGTCCGTGCATG+GGG | + | chr3_2:75793951-75793970 | Msa0425410:CDS | 70.0% |
| GTGCAGGCCGAGGTCGTGGA+AGG | + | chr3_2:75794409-75794428 | Msa0425410:intron | 70.0% | |
| GCAGGCCGAGGTCGTGGAAG+GGG | + | chr3_2:75794411-75794430 | Msa0425410:intron | 70.0% | |
| GCCGAGGTCGTGGAAGGGGA+AGG | + | chr3_2:75794415-75794434 | Msa0425410:CDS | 70.0% | |
| GTGGAAGGGGAAGGGGCCGT+GGG | + | chr3_2:75794424-75794443 | Msa0425410:CDS | 70.0% | |
| CGTGGGCGTGGTCGTGATGC+AGG | + | chr3_2:75794441-75794460 | Msa0425410:CDS | 70.0% | |
| CGTGGTCGTGATGCAGGCCG+TGG | + | chr3_2:75794447-75794466 | Msa0425410:CDS | 70.0% | |
| ! | GCAGAGGGCGCGTCCGTGCA+TGG | + | chr3_2:75793949-75793968 | Msa0425410:CDS | 75.0% |
| CGTGGACGGGGACGGGGCTA+TGG | + | chr3_2:75793984-75794003 | Msa0425410:CDS | 75.0% | |
| CGTGGAAGGGGAAGGGGCCG+TGG | + | chr3_2:75794423-75794442 | Msa0425410:CDS | 75.0% | |
| ! | AGGGGAAGGGGCCGTGGGCG+TGG | + | chr3_2:75794429-75794448 | Msa0425410:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 75790192 | 75794830 | 75790192 | ID=Msa0425410;Name=Msa0425410 |
| chr3_2 | mRNA | 75790192 | 75794830 | 75790192 | ID=Msa0425410-mRNA-1;Parent=Msa0425410;Name=Msa0425410-mRNA-1;_AED=0.24;_eAED=0.24;_QI=200|0.87|0.77|1|0.87|0.88|9|348|245 |
| chr3_2 | exon | 75790192 | 75790391 | 75790192 | ID=Msa0425410-mRNA-1:exon:19488;Parent=Msa0425410-mRNA-1 |
| chr3_2 | exon | 75790514 | 75790636 | 75790514 | ID=Msa0425410-mRNA-1:exon:19489;Parent=Msa0425410-mRNA-1 |
| chr3_2 | exon | 75792141 | 75792221 | 75792141 | ID=Msa0425410-mRNA-1:exon:19490;Parent=Msa0425410-mRNA-1 |
| chr3_2 | exon | 75792307 | 75792395 | 75792307 | ID=Msa0425410-mRNA-1:exon:19491;Parent=Msa0425410-mRNA-1 |
| chr3_2 | exon | 75792487 | 75792561 | 75792487 | ID=Msa0425410-mRNA-1:exon:19492;Parent=Msa0425410-mRNA-1 |
| chr3_2 | exon | 75793527 | 75793588 | 75793527 | ID=Msa0425410-mRNA-1:exon:19493;Parent=Msa0425410-mRNA-1 |
| chr3_2 | exon | 75793680 | 75793742 | 75793680 | ID=Msa0425410-mRNA-1:exon:19494;Parent=Msa0425410-mRNA-1 |
| chr3_2 | exon | 75793889 | 75794065 | 75793889 | ID=Msa0425410-mRNA-1:exon:19495;Parent=Msa0425410-mRNA-1 |
| chr3_2 | exon | 75794415 | 75794830 | 75794415 | ID=Msa0425410-mRNA-1:exon:19496;Parent=Msa0425410-mRNA-1 |
| chr3_2 | five_prime_UTR | 75790192 | 75790391 | 75790192 | ID=Msa0425410-mRNA-1:five_prime_utr;Parent=Msa0425410-mRNA-1 |
| chr3_2 | CDS | 75790514 | 75790636 | 75790514 | ID=Msa0425410-mRNA-1:cds;Parent=Msa0425410-mRNA-1 |
| chr3_2 | CDS | 75792141 | 75792221 | 75792141 | ID=Msa0425410-mRNA-1:cds;Parent=Msa0425410-mRNA-1 |
| chr3_2 | CDS | 75792307 | 75792395 | 75792307 | ID=Msa0425410-mRNA-1:cds;Parent=Msa0425410-mRNA-1 |
| chr3_2 | CDS | 75792487 | 75792561 | 75792487 | ID=Msa0425410-mRNA-1:cds;Parent=Msa0425410-mRNA-1 |
| chr3_2 | CDS | 75793527 | 75793588 | 75793527 | ID=Msa0425410-mRNA-1:cds;Parent=Msa0425410-mRNA-1 |
| chr3_2 | CDS | 75793680 | 75793742 | 75793680 | ID=Msa0425410-mRNA-1:cds;Parent=Msa0425410-mRNA-1 |
| chr3_2 | CDS | 75793889 | 75794065 | 75793889 | ID=Msa0425410-mRNA-1:cds;Parent=Msa0425410-mRNA-1 |
| chr3_2 | CDS | 75794415 | 75794482 | 75794415 | ID=Msa0425410-mRNA-1:cds;Parent=Msa0425410-mRNA-1 |
| chr3_2 | three_prime_UTR | 75794483 | 75794830 | 75794483 | ID=Msa0425410-mRNA-1:three_prime_utr;Parent=Msa0425410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
