Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357350 | XP_024638363.1 | 96.667 | 420 | 4 | 1 | 1 | 410 | 1 | 420 | 0.0 | 805 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357350 | sp|Q93YR3|F10AL_ARATH | 78.369 | 282 | 53 | 2 | 1 | 274 | 1 | 282 | 2.00e-138 | 405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357350 | A0A396ICN8 | 96.667 | 420 | 4 | 1 | 1 | 410 | 1 | 420 | 0.0 | 805 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032780 | Msa1357350 | 0.806483 | 8.047316e-50 | -8.615850e-47 |
| Msa0074030 | Msa1357350 | 0.829331 | 5.465018e-55 | -8.615850e-47 |
| Msa0116670 | Msa1357350 | 0.803176 | 3.950141e-49 | -8.615850e-47 |
| Msa0608320 | Msa1357350 | 0.814571 | 1.439397e-51 | -8.615850e-47 |
| Msa0666560 | Msa1357350 | -0.806802 | 6.892501e-50 | -8.615850e-47 |
| Msa0172900 | Msa1357350 | 0.825608 | 4.272273e-54 | -8.615850e-47 |
| Msa0173530 | Msa1357350 | 0.802293 | 6.009547e-49 | -8.615850e-47 |
| Msa0230490 | Msa1357350 | 0.835127 | 2.010569e-56 | -8.615850e-47 |
| Msa0425410 | Msa1357350 | 0.822753 | 2.001302e-53 | -8.615850e-47 |
| Msa0427150 | Msa1357350 | 0.810584 | 1.071937e-50 | -8.615850e-47 |
| Msa0434920 | Msa1357350 | 0.800734 | 1.254370e-48 | -8.615850e-47 |
| Msa0436720 | Msa1357350 | 0.804533 | 2.063692e-49 | -8.615850e-47 |
| Msa0443390 | Msa1357350 | 0.809393 | 1.935163e-50 | -8.615850e-47 |
| Msa1019260 | Msa1357350 | 0.802290 | 6.016727e-49 | -8.615850e-47 |
| Msa1104140 | Msa1357350 | 0.805681 | 1.187081e-49 | -8.615850e-47 |
| Msa1104210 | Msa1357350 | 0.817711 | 2.861584e-52 | -8.615850e-47 |
| Msa0275080 | Msa1357350 | 0.824721 | 6.923147e-54 | -8.615850e-47 |
| Msa0350890 | Msa1357350 | 0.815204 | 1.042273e-51 | -8.615850e-47 |
| Msa0358310 | Msa1357350 | 0.812260 | 4.635740e-51 | -8.615850e-47 |
| Msa0492900 | Msa1357350 | 0.817677 | 2.913313e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357350 | MtrunA17_Chr4g0057051 | 96.667 | 420 | 4 | 1 | 1 | 410 | 1 | 420 | 0.0 | 805 |
| Msa1357350 | MtrunA17_Chr8g0393201 | 49.609 | 256 | 83 | 3 | 1 | 256 | 1 | 210 | 6.17e-74 | 234 |
| Msa1357350 | MtrunA17_Chr3g0097231 | 42.045 | 88 | 51 | 0 | 119 | 206 | 15 | 102 | 1.34e-12 | 69.3 |
| Msa1357350 | MtrunA17_Chr5g0398901 | 37.209 | 86 | 54 | 0 | 118 | 203 | 5 | 90 | 2.46e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1357350 | AT4G22670.1 | 78.369 | 282 | 53 | 2 | 1 | 274 | 1 | 282 | 2.03e-139 | 405 |
| Msa1357350 | AT3G17880.1 | 61.069 | 262 | 91 | 4 | 5 | 263 | 6 | 259 | 6.34e-102 | 308 |
| Msa1357350 | AT3G17880.2 | 60.687 | 262 | 85 | 4 | 5 | 263 | 6 | 252 | 3.38e-101 | 305 |
| Msa1357350 | AT2G42810.1 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 3.64e-11 | 65.1 |
| Msa1357350 | AT2G42810.5 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 3.64e-11 | 65.1 |
| Msa1357350 | AT2G42810.4 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 3.64e-11 | 65.1 |
| Msa1357350 | AT2G42810.3 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 4.26e-11 | 65.1 |
| Msa1357350 | AT2G42810.2 | 38.636 | 88 | 54 | 0 | 119 | 206 | 17 | 104 | 4.30e-11 | 65.1 |
| Msa1357350 | AT1G62740.1 | 37.209 | 86 | 54 | 0 | 118 | 203 | 5 | 90 | 7.18e-11 | 64.3 |
Find 137 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGTGGCTTCCCTGGTGC+TGG | 0.194659 | tig0016063:-18681 | Msa1357350:CDS |
| TATGAAGAACCCTGCTAATT+TGG | 0.198090 | tig0016063:-17138 | Msa1357350:CDS |
| GCGAAAATGATGAGCAAATT+TGG | 0.207129 | tig0016063:-17077 | Msa1357350:CDS |
| GTTTGTGATTTCAGCATTCT+AGG | 0.213667 | tig0016063:-17017 | Msa1357350:three_prime_UTR |
| GGCATGCCTGGTGGGTTTCC+TGG | 0.235776 | tig0016063:-18801 | Msa1357350:CDS |
| GGCATGCCTGGTGGGTTTCC+TGG | 0.238441 | tig0016063:-18825 | Msa1357350:CDS |
| GGGTTTCCTGGTGGCATGCC+TGG | 0.279568 | tig0016063:-18813 | Msa1357350:CDS |
| GGGTTTCCTGGTGGCATGCC+AGG | 0.297533 | tig0016063:-18789 | Msa1357350:CDS |
| CCTGGAGCTGGAGGCATGCC+TGG | 0.308667 | tig0016063:-18759 | Msa1357350:CDS |
| ACCTCTGTTCGCATACATTA+TGG | 0.308744 | tig0016063:+20847 | None:intergenic |
| CAGGTGGCTTCCCTGGTGCT+GGG | 0.313910 | tig0016063:-18680 | Msa1357350:CDS |
| TCCTCAAGCTTGTGGGCATT+TGG | 0.324473 | tig0016063:+19091 | None:intergenic |
| TTGTATCCTTTAGCAGAATC+AGG | 0.328841 | tig0016063:+20004 | None:intergenic |
| TGATGCAAATGCTGCTTTAG+AGG | 0.329748 | tig0016063:-20681 | Msa1357350:intron |
| CTAAATGCCGTCATCAAATC+AGG | 0.329807 | tig0016063:+18017 | None:intergenic |
| GGCATGCCAGGTGGGTTCCC+TGG | 0.337993 | tig0016063:-18777 | Msa1357350:CDS |
| CCAGGTGGCTTCCCTGGAGC+TGG | 0.339840 | tig0016063:-18711 | Msa1357350:CDS |
| CCAGGTGGGTTCCCTGGAGC+TGG | 0.341795 | tig0016063:-18771 | Msa1357350:CDS |
| CCTGGAGCTGGAGGCATGCC+AGG | 0.350872 | tig0016063:-18699 | Msa1357350:CDS |
| GGCATGCCAGGTGGCTTCCC+TGG | 0.351676 | tig0016063:-18717 | Msa1357350:CDS |
| GGTTTGGAATAAGCAGATTC+AGG | 0.357783 | tig0016063:+22585 | None:intergenic |
| TAGTCGTTATCCTTCTGTTA+AGG | 0.357845 | tig0016063:-16824 | Msa1357350:three_prime_UTR |
| GCATCACGGATTGCAGCATT+AGG | 0.364661 | tig0016063:+20698 | None:intergenic |
| CCTGGAGCTGGAGGCATGCC+AGG | 0.371236 | tig0016063:-18729 | Msa1357350:CDS |
| TTCCTGGTGGCATGCCTGGT+GGG | 0.372208 | tig0016063:-18809 | Msa1357350:CDS |
| CCTGGTGGTTTCCCTGGAGC+TGG | 0.372597 | tig0016063:-18741 | Msa1357350:CDS |
| TTGCTAAAATCAACATTTCC+AGG | 0.373233 | tig0016063:+18639 | None:intergenic |
| GGCATGCCAGGAGGGGTGCC+TGG | 0.379056 | tig0016063:-18657 | Msa1357350:CDS |
| GGCATGCCTGGTGGTTTCCC+TGG | 0.382813 | tig0016063:-18747 | Msa1357350:CDS |
| AGTCGTTATCCTTCTGTTAA+GGG | 0.383624 | tig0016063:-16823 | None:intergenic |
| TGAAGAGCAGCCATAACTTC+TGG | 0.397339 | tig0016063:+17990 | None:intergenic |
| CCTGGCATGCCTCCAGCTCC+AGG | 0.401023 | tig0016063:+18699 | None:intergenic |
| CCTGGCATGCCTCCAGCTCC+AGG | 0.401023 | tig0016063:+18729 | None:intergenic |
| GGATTTATAGGTTACCGGTT+TGG | 0.402406 | tig0016063:+22569 | None:intergenic |
| CCAGGCATGCCTCCAGCTCC+AGG | 0.402735 | tig0016063:+18759 | None:intergenic |
| GGCATGCCAGGTGGCTTCCC+TGG | 0.407390 | tig0016063:-18687 | Msa1357350:CDS |
| ACTGAAGCATTTCATCGAAC+AGG | 0.419219 | tig0016063:-22775 | Msa1357350:CDS |
| TGATGCTTAGCCAAATTAGC+AGG | 0.424893 | tig0016063:+17128 | None:intergenic |
| AGGTGGCTTCCCTGGTGCTG+GGG | 0.431193 | tig0016063:-18679 | Msa1357350:CDS |
| GCAATTACAGGCGCAACCTT+AGG | 0.431280 | tig0016063:+17098 | None:intergenic |
| GATTTGAAATGCAGGTAAGT+TGG | 0.431902 | tig0016063:-20921 | Msa1357350:intron |
| AATAAATGCAGTACTTAAGA+AGG | 0.435773 | tig0016063:-19891 | Msa1357350:intron |
| GAGCAATTTACCTACAAAAC+AGG | 0.441420 | tig0016063:+16900 | None:intergenic |
| AACCCACCAGGCATGCCTCC+TGG | 0.442230 | tig0016063:+18831 | None:intergenic |
| GACGGTGTTCCTCAAGCTTG+TGG | 0.445827 | tig0016063:+19083 | None:intergenic |
| TGAATCTGCTTATTCCAAAC+CGG | 0.446532 | tig0016063:-22583 | Msa1357350:intron |
| TTCCTGGTGGCATGCCAGGT+GGG | 0.449604 | tig0016063:-18785 | Msa1357350:CDS |
| GAAGGATCGGCGAGAGTTGA+AGG | 0.450788 | tig0016063:+22741 | None:intergenic |
| ATTTAGTGATCCAGAAGTTA+TGG | 0.450797 | tig0016063:-18000 | Msa1357350:CDS |
| TTTCCTGGTGGCATGCCTGG+TGG | 0.456397 | tig0016063:-18810 | Msa1357350:CDS |
| CATGCCTCCTGGATTTCTAC+TGG | 0.458350 | tig0016063:+18842 | None:intergenic |
| GGTGGCTTCCCTGGTGCTGG+GGG | 0.460557 | tig0016063:-18678 | Msa1357350:CDS |
| ATTAATCCTGATTCTGCTAA+AGG | 0.461076 | tig0016063:-20010 | Msa1357350:CDS |
| GTTGCTGATAAATAAAGAAC+GGG | 0.461987 | tig0016063:+16878 | None:intergenic |
| ACGTCGCCGTGCTGAAGCTC+AGG | 0.464988 | tig0016063:-19002 | Msa1357350:intron |
| ACCTTCAGAAATAGCTTCCA+TGG | 0.467634 | tig0016063:+22017 | None:intergenic |
| TTTCCTGGTGGCATGCCAGG+TGG | 0.472959 | tig0016063:-18786 | Msa1357350:CDS |
| GGCATAGCACGAGCGATGTT+AGG | 0.474824 | tig0016063:-19974 | Msa1357350:CDS |
| CCAGCTCCAGGGAAGCCACC+TGG | 0.479950 | tig0016063:+18711 | None:intergenic |
| ACGGTGTTCCTCAAGCTTGT+GGG | 0.484817 | tig0016063:+19084 | None:intergenic |
| GATGGGAGACTCTTCTATTG+AGG | 0.485824 | tig0016063:-22085 | Msa1357350:CDS |
| AGAAATCCAGGAGGCATGCC+TGG | 0.486319 | tig0016063:-18837 | Msa1357350:CDS |
| CCAGCTCCAGGGAACCCACC+TGG | 0.488525 | tig0016063:+18771 | None:intergenic |
| CCAGCACCAGGGAAGCCACC+TGG | 0.501406 | tig0016063:+18681 | None:intergenic |
| AACACCGTCGGAAGTATGAT+AGG | 0.501898 | tig0016063:-19069 | Msa1357350:CDS |
| ACATTTCCAGGCACCCCTCC+TGG | 0.502248 | tig0016063:+18651 | None:intergenic |
| AAATTTGGAGGTGCTGGTGC+TGG | 0.503831 | tig0016063:-17062 | Msa1357350:CDS |
| AGTGAAGGTGGAGGAAGTAG+AGG | 0.506193 | tig0016063:-22276 | Msa1357350:CDS |
| ATCGGCGAGAGTTGAAGGAT+TGG | 0.506790 | tig0016063:+22746 | None:intergenic |
| CAACATAATGTTCTACTGAC+TGG | 0.508828 | tig0016063:-16859 | Msa1357350:three_prime_UTR |
| TTCAGTTCTTTCAGCTTAGA+CGG | 0.510852 | tig0016063:+22792 | None:intergenic |
| GGTGGCTTCCCTGGAGCTGG+AGG | 0.510854 | tig0016063:-18708 | Msa1357350:CDS |
| GGTGGGTTCCCTGGAGCTGG+AGG | 0.512808 | tig0016063:-18768 | Msa1357350:CDS |
| AACCCACCTGGCATGCCACC+AGG | 0.518038 | tig0016063:+18783 | None:intergenic |
| ATGAGCAAATTTGGAGGTGC+TGG | 0.518441 | tig0016063:-17068 | Msa1357350:CDS |
| GGTGGTTTCCCTGGAGCTGG+AGG | 0.521607 | tig0016063:-18738 | Msa1357350:CDS |
| TCATCTTCCAGTAGAAATCC+AGG | 0.527739 | tig0016063:-18849 | Msa1357350:CDS |
| TGATGACATAGAGGATGTAG+AGG | 0.529858 | tig0016063:-22306 | Msa1357350:CDS |
| GAAGGTGGAGGAAGTAGAGG+AGG | 0.530279 | tig0016063:-22273 | Msa1357350:CDS |
| TGATGATGATCCTCCACAAA+AGG | 0.530712 | tig0016063:-22198 | Msa1357350:intron |
| GTCGTTATCCTTCTGTTAAG+GGG | 0.537029 | tig0016063:-16822 | None:intergenic |
| CCAGCTCCAGGGAAACCACC+AGG | 0.542496 | tig0016063:+18741 | None:intergenic |
| ATCCAGGAGGCATGCCTGGT+GGG | 0.544169 | tig0016063:-18833 | Msa1357350:CDS |
| TTGAAATGCAGGTAAGTTGG+AGG | 0.550318 | tig0016063:-20918 | Msa1357350:intron |
| GCCATGGAAGCTATTTCTGA+AGG | 0.550734 | tig0016063:-22018 | Msa1357350:intron |
| ACGAGCGATGTTAGGTCAGT+GGG | 0.552926 | tig0016063:-19966 | Msa1357350:CDS |
| CTGGCATGCCTCCAGCTCCA+GGG | 0.555498 | tig0016063:+18700 | None:intergenic |
| CTGGCATGCCTCCAGCTCCA+GGG | 0.562934 | tig0016063:+18730 | None:intergenic |
| AACCCACCAGGCATGCCACC+AGG | 0.566427 | tig0016063:+18807 | None:intergenic |
| AAATGCAGGTAAGTTGGAGG+AGG | 0.571709 | tig0016063:-20915 | Msa1357350:intron |
| GTTATGGCTGCTCTTCAAGA+TGG | 0.577168 | tig0016063:-17984 | Msa1357350:intron |
| CTAAAGCAGCATTTGCATCA+CGG | 0.578900 | tig0016063:+20684 | None:intergenic |
| TGTTGCTGATAAATAAAGAA+CGG | 0.578903 | tig0016063:+16877 | None:intergenic |
| GATGTTAGGTCAGTGGGCAG+AGG | 0.584127 | tig0016063:-19960 | Msa1357350:CDS |
| GCATACATTATGGCAGAGGT+AGG | 0.590248 | tig0016063:+20857 | None:intergenic |
| ATGCCTGGTGGGTTTCCTGG+TGG | 0.590868 | tig0016063:-18798 | Msa1357350:CDS |
| TCAGTGGGCAGAGGCTGCAA+AGG | 0.593485 | tig0016063:-19951 | Msa1357350:CDS |
| GGAGCTGGAGGCATGCCAGG+TGG | 0.596271 | tig0016063:-18696 | Msa1357350:CDS |
| GGAGCTGGAGGCATGCCAGG+TGG | 0.596271 | tig0016063:-18726 | Msa1357350:CDS |
| GAAGAAGGAAAGTGAAGGAT+CGG | 0.598302 | tig0016063:+22728 | None:intergenic |
| CAGGCATGCCTCCAGCTCCA+GGG | 0.598561 | tig0016063:+18760 | None:intergenic |
| ATGCCTGGTGGGTTTCCTGG+TGG | 0.601094 | tig0016063:-18822 | Msa1357350:CDS |
| GTTCGCATACATTATGGCAG+AGG | 0.603058 | tig0016063:+20853 | None:intergenic |
| ATGCCACCAGGAAACCCACC+AGG | 0.604434 | tig0016063:+18795 | None:intergenic |
| ATGCCACCAGGAAACCCACC+AGG | 0.604434 | tig0016063:+18819 | None:intergenic |
| CACGAGCGATGTTAGGTCAG+TGG | 0.605207 | tig0016063:-19967 | Msa1357350:CDS |
| TAAGCATCAAGCAAATCCTA+AGG | 0.609912 | tig0016063:-17114 | Msa1357350:CDS |
| GTTGGCTAAAGCTAAAGCCA+TGG | 0.612574 | tig0016063:-22034 | Msa1357350:CDS |
| TTCAAATATAGACTATGATG+AGG | 0.614340 | tig0016063:-19915 | Msa1357350:CDS |
| GGAGCTGGAGGCATGCCTGG+TGG | 0.616668 | tig0016063:-18756 | Msa1357350:CDS |
| GATGCTTAGCCAAATTAGCA+GGG | 0.619304 | tig0016063:+17129 | None:intergenic |
| ACCAAATGCCCACAAGCTTG+AGG | 0.625027 | tig0016063:-19092 | Msa1357350:CDS |
| GAGTCGCGAGTCTTCACAGT+TGG | 0.629669 | tig0016063:-22052 | Msa1357350:CDS |
| GGAGAGTGATGATGACATAG+AGG | 0.630644 | tig0016063:-22315 | Msa1357350:CDS |
| TGAATCTGATGTTGAGCTAG+AGG | 0.631648 | tig0016063:-22237 | Msa1357350:CDS |
| ATTACAGGCTGCATATGAGA+AGG | 0.633459 | tig0016063:-18889 | Msa1357350:intron |
| TCTTCCGCGACTATCTCGAA+AGG | 0.633532 | tig0016063:-22710 | Msa1357350:intron |
| AGGATCATCATCAGGCTCAA+CGG | 0.634198 | tig0016063:+22208 | None:intergenic |
| AATCCAGGAGGCATGCCTGG+TGG | 0.636100 | tig0016063:-18834 | Msa1357350:CDS |
| TCAGGACCCTGATTTGATGA+CGG | 0.640802 | tig0016063:-18024 | Msa1357350:intron |
| TAAATGCCGTCATCAAATCA+GGG | 0.644915 | tig0016063:+18018 | None:intergenic |
| GCCATAATGTATGCGAACAG+AGG | 0.651943 | tig0016063:-20848 | Msa1357350:intron |
| TGACAACCTGAGCTTCAGCA+CGG | 0.665555 | tig0016063:+18996 | None:intergenic |
| TTAACCTTTCGAGATAGTCG+CGG | 0.666505 | tig0016063:+22706 | None:intergenic |
| AAAATGATGAGCAAATTTGG+AGG | 0.667013 | tig0016063:-17074 | Msa1357350:CDS |
| CGTGTGTGAGACTGTGACTG+CGG | 0.672748 | tig0016063:+22821 | None:intergenic |
| AATTAAATACTCAAGAGCAG+AGG | 0.676278 | tig0016063:+16994 | None:intergenic |
| AGTCTATATTTGAAGCTACG+TGG | 0.679272 | tig0016063:+19924 | None:intergenic |
| TCGCGGAAGAAGGAAAGTGA+AGG | 0.681654 | tig0016063:+22723 | None:intergenic |
| GAATCTGATGTTGAGCTAGA+GGG | 0.681770 | tig0016063:-22236 | Msa1357350:CDS |
| TTGTGTATGATAGAGATCTG+TGG | 0.694890 | tig0016063:-22336 | Msa1357350:intron |
| ACAAGCTTGAGGAACACCGT+CGG | 0.708816 | tig0016063:-19081 | Msa1357350:CDS |
| GCAACCTATCATACTTCCGA+CGG | 0.716325 | tig0016063:+19065 | None:intergenic |
| GCTAAAGGATACAAGTCACG+TGG | 0.726718 | tig0016063:-19995 | Msa1357350:CDS |
| AGTCACAGTCTCACACACGA+TGG | 0.752498 | tig0016063:-22817 | Msa1357350:exon |
| GTGAGACTGTGACTGCGGCG+CGG | 0.753090 | tig0016063:+22826 | None:intergenic |
| TCTTCCAGTAGAAATCCAGG+AGG | 0.793372 | tig0016063:-18846 | Msa1357350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATCTTATTTTATTTTTTAA+TGG | - | tig0016063:18555-18574 | Msa1357350:intron | 10.0% |
| !!! | TCGTTTTATAAAATTATAAC+CGG | + | tig0016063:17208-17227 | None:intergenic | 15.0% |
| !!! | TATAAATAAATAACCTTTTG+TGG | + | tig0016063:17487-17506 | None:intergenic | 15.0% |
| !!! | ATTTTTATGGTTACTATTAT+TGG | - | tig0016063:17721-17740 | Msa1357350:intron | 15.0% |
| !!! | TTTTTATGGTTACTATTATT+GGG | - | tig0016063:17722-17741 | Msa1357350:intron | 15.0% |
| !!! | ATCAAATTTTTATTGGTTAA+AGG | - | tig0016063:18145-18164 | Msa1357350:intron | 15.0% |
| !! | AATAGGTATATGTAATTTAT+GGG | + | tig0016063:18487-18506 | None:intergenic | 15.0% |
| !! | TAACATCATTCTTAATTAAT+TGG | + | tig0016063:20137-20156 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTAAAATACCC+AGG | + | tig0016063:21218-21237 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTGGTTAATTTA+AGG | - | tig0016063:21828-21847 | Msa1357350:intron | 15.0% |
| !!! | TTTTTTTCTGGTTAATTTAA+GGG | - | tig0016063:21829-21848 | Msa1357350:intron | 15.0% |
| !! | ATTTATCATATCTATAAAGA+GGG | - | tig0016063:22050-22069 | Msa1357350:CDS | 15.0% |
| !!! | ATTTAATTGGATATTTTGTT+TGG | - | tig0016063:22078-22097 | Msa1357350:CDS | 15.0% |
| !! | TGTTCAAATTATGTTATATT+TGG | + | tig0016063:22394-22413 | None:intergenic | 15.0% |
| !! | ACAAATTAAAGCAGATAATA+GGG | + | tig0016063:17026-17045 | None:intergenic | 20.0% |
| !! | AACAAATTAAAGCAGATAAT+AGG | + | tig0016063:17027-17046 | None:intergenic | 20.0% |
| !! | AACATTAAACAAAAACAACA+AGG | + | tig0016063:17124-17143 | None:intergenic | 20.0% |
| !! | GAAAAAATTAATCTATTGCA+TGG | - | tig0016063:17774-17793 | Msa1357350:intron | 20.0% |
| !! | AAATATTCAAGACAAGATAT+GGG | + | tig0016063:17880-17899 | None:intergenic | 20.0% |
| !! | AAAATATTCAAGACAAGATA+TGG | + | tig0016063:17881-17900 | None:intergenic | 20.0% |
| !!! | TGTGAATTTTCTATTTTCAA+AGG | + | tig0016063:18102-18121 | None:intergenic | 20.0% |
| !!! | TCCACAAATCAAATTTTTAT+TGG | - | tig0016063:18138-18157 | Msa1357350:intron | 20.0% |
| !!! | ACCAATAAAAATTTGATTTG+TGG | + | tig0016063:18142-18161 | None:intergenic | 20.0% |
| !!! | AACGAGTTTATTTGTTATTT+TGG | + | tig0016063:18384-18403 | None:intergenic | 20.0% |
| !! | GAATAGGTATATGTAATTTA+TGG | + | tig0016063:18488-18507 | None:intergenic | 20.0% |
| !!! | TTTGAAATAGAACATTCAAT+GGG | + | tig0016063:18659-18678 | None:intergenic | 20.0% |
| !!! | ATTTGAAATAGAACATTCAA+TGG | + | tig0016063:18660-18679 | None:intergenic | 20.0% |
| !!! | TTCATAATTTGTTTCTCTAA+AGG | + | tig0016063:19263-19282 | None:intergenic | 20.0% |
| !! | AATTATGACCATTGAAAAAA+AGG | + | tig0016063:19544-19563 | None:intergenic | 20.0% |
| !! | TACATAGACATAATAAATTC+TGG | + | tig0016063:19587-19606 | None:intergenic | 20.0% |
| !! | TTAAGTAACCTATTTCAATA+TGG | - | tig0016063:20005-20024 | Msa1357350:CDS | 20.0% |
| !!! | TAATAAAATATGGATTGTGT+AGG | - | tig0016063:20550-20569 | Msa1357350:intron | 20.0% |
| !!! | AAAAAGTATGCAAAATTTCA+TGG | - | tig0016063:21307-21326 | Msa1357350:intron | 20.0% |
| !!! | AAAAGTATGCAAAATTTCAT+GGG | - | tig0016063:21308-21327 | Msa1357350:intron | 20.0% |
| !!! | TAATTTTCTGTTCTAATACT+TGG | - | tig0016063:21708-21727 | Msa1357350:intron | 20.0% |
| !! | TCATGAAAGAAAAAAAAGTT+TGG | + | tig0016063:21751-21770 | None:intergenic | 20.0% |
| !! | GATTTATCATATCTATAAAG+AGG | - | tig0016063:22049-22068 | Msa1357350:CDS | 20.0% |
| !! | TTTATCATATCTATAAAGAG+GGG | - | tig0016063:22051-22070 | Msa1357350:CDS | 20.0% |
| !!! | ATGTTGCATTTTTAATTGTA+CGG | - | tig0016063:22715-22734 | Msa1357350:CDS | 20.0% |
| !!! | TCATTAAACTTTTTTATGCA+AGG | - | tig0016063:22746-22765 | Msa1357350:CDS | 20.0% |
| !!! | TTGATTGTTATTTTCAGTCT+CGG | - | tig0016063:17051-17070 | Msa1357350:exon | 25.0% |
| ! | CAAAAACAACAAGGATTTAT+AGG | + | tig0016063:17115-17134 | None:intergenic | 25.0% |
| !! | AAATAAATAACCTTTTGTGG+AGG | + | tig0016063:17484-17503 | None:intergenic | 25.0% |
| ! | GTTTATTTATGTTGAGTTTG+AGG | - | tig0016063:17529-17548 | Msa1357350:intron | 25.0% |
| ! | AATTAATCTATTGCATGGAA+TGG | - | tig0016063:17779-17798 | Msa1357350:intron | 25.0% |
| !!! | AATGGTTTTAAGTTGATACT+TGG | - | tig0016063:17797-17816 | Msa1357350:intron | 25.0% |
| !!! | CTTGAATATTTTAAAACCCT+AGG | - | tig0016063:17889-17908 | Msa1357350:intron | 25.0% |
| ! | ATTGTAACATGTTTACTGTT+CGG | + | tig0016063:17959-17978 | None:intergenic | 25.0% |
| ! | CTATTCTCTATATATAACCA+GGG | - | tig0016063:18502-18521 | Msa1357350:intron | 25.0% |
| !! | TTTTAATGGCAACTATGTTA+TGG | - | tig0016063:18569-18588 | Msa1357350:intron | 25.0% |
| ! | TTTAATGGCAACTATGTTAT+GGG | - | tig0016063:18570-18589 | Msa1357350:intron | 25.0% |
| ! | GAAGGGATAAAATTAATCAA+TGG | - | tig0016063:18603-18622 | Msa1357350:intron | 25.0% |
| !!! | TTTTTTTGTTCTTATTGTCC+AGG | - | tig0016063:18884-18903 | Msa1357350:CDS | 25.0% |
| ! | TTTGCTTGACTTAAAATAGA+CGG | - | tig0016063:19059-19078 | Msa1357350:CDS | 25.0% |
| ! | TGTTGCATTATATTCCAAAA+AGG | - | tig0016063:19111-19130 | Msa1357350:intron | 25.0% |
| ! | TTCAAATTACTCACAAAGAT+AGG | - | tig0016063:19187-19206 | Msa1357350:intron | 25.0% |
| !!! | GAGATATACCTTTTTTTCAA+TGG | - | tig0016063:19533-19552 | Msa1357350:intron | 25.0% |
| ! | TTCAAATATAGACTATGATG+AGG | - | tig0016063:19754-19773 | Msa1357350:intron | 25.0% |
| ! | AATAAATGCAGTACTTAAGA+AGG | - | tig0016063:19778-19797 | Msa1357350:intron | 25.0% |
| ! | GTAACATAAACGAAATTATG+AGG | - | tig0016063:19961-19980 | Msa1357350:CDS | 25.0% |
| ! | GCAAATTTCCATATTGAAAT+AGG | + | tig0016063:20016-20035 | None:intergenic | 25.0% |
| ! | TTATACGTTATAGATTATGC+CGG | - | tig0016063:20066-20085 | Msa1357350:intron | 25.0% |
| !!! | GAAGTGTTGCATAATAATTT+AGG | + | tig0016063:20163-20182 | None:intergenic | 25.0% |
| !! | GCATGATAATAATGATAATG+AGG | - | tig0016063:20204-20223 | Msa1357350:intron | 25.0% |
| !! | TTCAATCTGATATTGTTTTC+AGG | + | tig0016063:20316-20335 | None:intergenic | 25.0% |
| !!! | AACTTCATAGTTTTTTTAGC+TGG | - | tig0016063:20373-20392 | Msa1357350:intron | 25.0% |
| ! | TACAAGTAAAAACCTAGAAT+TGG | + | tig0016063:20420-20439 | None:intergenic | 25.0% |
| ! | TTGAATATTTGAATATTCCC+AGG | - | tig0016063:21252-21271 | Msa1357350:intron | 25.0% |
| !! | AAATAACTTCCAATTTTCCT+GGG | + | tig0016063:21272-21291 | None:intergenic | 25.0% |
| !! | AAAATAACTTCCAATTTTCC+TGG | + | tig0016063:21273-21292 | None:intergenic | 25.0% |
| !! | AATTTCCCATCTTTTAACAT+GGG | - | tig0016063:21336-21355 | Msa1357350:intron | 25.0% |
| ! | TTATTCCCATGTTAAAAGAT+GGG | + | tig0016063:21344-21363 | None:intergenic | 25.0% |
| ! | ATTATTCCCATGTTAAAAGA+TGG | + | tig0016063:21345-21364 | None:intergenic | 25.0% |
| ! | AATTTCATCGAAATATACCT+AGG | - | tig0016063:21362-21381 | Msa1357350:intron | 25.0% |
| !! | AGTTTAAGATTTACATTCCT+AGG | + | tig0016063:21447-21466 | None:intergenic | 25.0% |
| ! | TTTATATAACCTTCCATTTG+TGG | - | tig0016063:21515-21534 | Msa1357350:intron | 25.0% |
| ! | TTATATAACCTTCCATTTGT+GGG | - | tig0016063:21516-21535 | Msa1357350:intron | 25.0% |
| !! | ATTTTGTGATTCCAAATCTA+AGG | + | tig0016063:21910-21929 | None:intergenic | 25.0% |
| ! | ACAAAATCTGCTAAAATCTA+AGG | - | tig0016063:21923-21942 | Msa1357350:intron | 25.0% |
| ! | GGGAGATGTTAATTTAATTA+AGG | - | tig0016063:22176-22195 | Msa1357350:intron | 25.0% |
| ! | ATGTAAAGACATGTATTTGA+AGG | - | tig0016063:22249-22268 | Msa1357350:CDS | 25.0% |
| ! | GACTCAAAATTTAGTCAATA+AGG | - | tig0016063:22324-22343 | Msa1357350:CDS | 25.0% |
| ! | CAATATGTTAAAAAGTGACA+CGG | + | tig0016063:22431-22450 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTCATTCAGAAGA+CGG | + | tig0016063:22473-22492 | None:intergenic | 25.0% |
| ! | TGTTGCTGATAAATAAAGAA+CGG | + | tig0016063:22795-22814 | None:intergenic | 25.0% |
| AACAAGGATTTATAGGTTAC+CGG | + | tig0016063:17108-17127 | None:intergenic | 30.0% | |
| TTATGGTTACTATTATTGGG+AGG | - | tig0016063:17725-17744 | Msa1357350:intron | 30.0% | |
| ! | TTTTTCGCATACATTGTTTG+TGG | + | tig0016063:17760-17779 | None:intergenic | 30.0% |
| AGTCGTAAGATACTTTGATT+TGG | - | tig0016063:17851-17870 | Msa1357350:intron | 30.0% | |
| !!! | GAATATTTTAAAACCCTAGG+AGG | - | tig0016063:17892-17911 | Msa1357350:intron | 30.0% |
| TTATTTATCACTAGCAGTCA+GGG | + | tig0016063:18006-18025 | None:intergenic | 30.0% | |
| ACTGCTAGTGATAAATAACT+GGG | - | tig0016063:18008-18027 | Msa1357350:CDS | 30.0% | |
| ! | CTCACTATAGAATTTGCTTT+AGG | + | tig0016063:18078-18097 | None:intergenic | 30.0% |
| TAACAAATAAACTCGTTGCT+TGG | - | tig0016063:18387-18406 | Msa1357350:intron | 30.0% | |
| CCTGGTTATATATAGAGAAT+AGG | + | tig0016063:18504-18523 | None:intergenic | 30.0% | |
| CCTATTCTCTATATATAACC+AGG | - | tig0016063:18501-18520 | Msa1357350:intron | 30.0% | |
| TCATACCAGTTCATAAAGTT+TGG | - | tig0016063:18533-18552 | Msa1357350:intron | 30.0% | |
| AAGATCCAAACTTTATGAAC+TGG | + | tig0016063:18541-18560 | None:intergenic | 30.0% | |
| TTATGGGATGATGTTAAGAA+GGG | - | tig0016063:18586-18605 | Msa1357350:intron | 30.0% | |
| ! | GTAATGTGATGATGTTAGAT+TGG | - | tig0016063:18633-18652 | Msa1357350:CDS | 30.0% |
| ! | TTCAAATATCTCGACTGTTT+TGG | - | tig0016063:18673-18692 | Msa1357350:CDS | 30.0% |
| ! | TCAAATATCTCGACTGTTTT+GGG | - | tig0016063:18674-18693 | Msa1357350:CDS | 30.0% |
| TGTTATAAGTCTTTGAGTGT+TGG | + | tig0016063:18718-18737 | None:intergenic | 30.0% | |
| CACTCAAAGACTTATAACAA+TGG | - | tig0016063:18719-18738 | Msa1357350:CDS | 30.0% | |
| ! | GGAATTATGATTTGAAATGC+AGG | - | tig0016063:18740-18759 | Msa1357350:CDS | 30.0% |
| !! | CTTCATTTTGATGTAAACAC+TGG | + | tig0016063:18948-18967 | None:intergenic | 30.0% |
| TGCAACAAAAACATTATGCA+TGG | + | tig0016063:19098-19117 | None:intergenic | 30.0% | |
| TCTAACCTAAAAAGAGAGAA+AGG | - | tig0016063:19154-19173 | Msa1357350:intron | 30.0% | |
| TTAAGTAGACACTCCTTTAA+AGG | - | tig0016063:19392-19411 | Msa1357350:intron | 30.0% | |
| ATCAGGATTAATCTGGAAAA+AGG | + | tig0016063:19651-19670 | None:intergenic | 30.0% | |
| ATTAATCCTGATTCTGCTAA+AGG | - | tig0016063:19659-19678 | Msa1357350:intron | 30.0% | |
| ATTCCCATCAAAAGATACTA+GGG | + | tig0016063:19816-19835 | None:intergenic | 30.0% | |
| TATTCCCATCAAAAGATACT+AGG | + | tig0016063:19817-19836 | None:intergenic | 30.0% | |
| AATTCTAAATGCAAGAAGGT+AGG | + | tig0016063:19909-19928 | None:intergenic | 30.0% | |
| AGGTAATTCTAAATGCAAGA+AGG | + | tig0016063:19913-19932 | None:intergenic | 30.0% | |
| AGTAAAAACCTAGAATTGGT+TGG | + | tig0016063:20416-20435 | None:intergenic | 30.0% | |
| ACAAATCCTGCTTAGTTAAA+GGG | - | tig0016063:20486-20505 | Msa1357350:intron | 30.0% | |
| AATAAGTTGTGTTCAATGGT+TGG | - | tig0016063:20510-20529 | Msa1357350:intron | 30.0% | |
| ! | TGCTAACTTGTATACATTAC+AGG | - | tig0016063:20765-20784 | Msa1357350:intron | 30.0% |
| TTGCTAAAATCAACATTTCC+AGG | + | tig0016063:21033-21052 | None:intergenic | 30.0% | |
| TTGAATATTCCCAGGAAAAT+TGG | - | tig0016063:21260-21279 | Msa1357350:intron | 30.0% | |
| CATGTTAAAAGATGGGAAAT+TGG | + | tig0016063:21337-21356 | None:intergenic | 30.0% | |
| ! | CAATTTCCCATCTTTTAACA+TGG | - | tig0016063:21335-21354 | Msa1357350:intron | 30.0% |
| GTTGAGAAATCATTATTCCT+AGG | + | tig0016063:21382-21401 | None:intergenic | 30.0% | |
| ! | GTATATCCATGTTTGTTACA+AGG | + | tig0016063:21404-21423 | None:intergenic | 30.0% |
| TTACATTCCTAGGAATACAT+GGG | + | tig0016063:21437-21456 | None:intergenic | 30.0% | |
| TTTACATTCCTAGGAATACA+TGG | + | tig0016063:21438-21457 | None:intergenic | 30.0% | |
| ATTTAGTGATCCAGAAGTTA+TGG | - | tig0016063:21669-21688 | Msa1357350:intron | 30.0% | |
| ! | ACCTTTTCTATCCTTAGATT+TGG | - | tig0016063:21896-21915 | Msa1357350:intron | 30.0% |
| TCCAAATCTAAGGATAGAAA+AGG | + | tig0016063:21900-21919 | None:intergenic | 30.0% | |
| !!! | TGGATATTTTGTTTGGTTTG+AGG | - | tig0016063:22085-22104 | Msa1357350:CDS | 30.0% |
| !!! | GGATATTTTGTTTGGTTTGA+GGG | - | tig0016063:22086-22105 | Msa1357350:CDS | 30.0% |
| AAAAAAGAGAACCAAACAAG+AGG | + | tig0016063:22135-22154 | None:intergenic | 30.0% | |
| !!! | TCTTGTTTGGTTCTCTTTTT+TGG | - | tig0016063:22134-22153 | Msa1357350:intron | 30.0% |
| GATAGTTCTTAAGATGAGAA+GGG | - | tig0016063:22156-22175 | Msa1357350:intron | 30.0% | |
| TCTGGTCCAATATTGAATAT+TGG | - | tig0016063:22297-22316 | Msa1357350:CDS | 30.0% | |
| TCTGCTCCAATATTCAATAT+TGG | + | tig0016063:22306-22325 | None:intergenic | 30.0% | |
| TAGAAGAAGATAAGAGGAAT+GGG | + | tig0016063:22370-22389 | None:intergenic | 30.0% | |
| TTAGAAGAAGATAAGAGGAA+TGG | + | tig0016063:22371-22390 | None:intergenic | 30.0% | |
| TTTGGTTAGAAGAAGATAAG+AGG | + | tig0016063:22376-22395 | None:intergenic | 30.0% | |
| !!! | AGTTCCTCATTTCTCTTTTT+TGG | - | tig0016063:22497-22516 | Msa1357350:intron | 30.0% |
| TCAACCAAAAAAGAGAAATG+AGG | + | tig0016063:22504-22523 | None:intergenic | 30.0% | |
| AAAATGATGAGCAAATTTGG+AGG | - | tig0016063:22595-22614 | Msa1357350:CDS | 30.0% | |
| AATTAAATACTCAAGAGCAG+AGG | + | tig0016063:22678-22697 | None:intergenic | 30.0% | |
| GTTGCTGATAAATAAAGAAC+GGG | + | tig0016063:22794-22813 | None:intergenic | 30.0% | |
| TTCAGTTCTTTCAGCTTAGA+CGG | + | tig0016063:16880-16899 | None:intergenic | 35.0% | |
| TGAATCTGCTTATTCCAAAC+CGG | - | tig0016063:17086-17105 | Msa1357350:CDS | 35.0% | |
| !! | ATATCGTCGAAGTATTGTCA+CGG | - | tig0016063:17153-17172 | Msa1357350:intron | 35.0% |
| TTGTGTATGATAGAGATCTG+TGG | - | tig0016063:17333-17352 | Msa1357350:intron | 35.0% | |
| TGTAGAGGAAGAAAAAGTGA+AGG | - | tig0016063:17378-17397 | Msa1357350:intron | 35.0% | |
| !! | AATGCATGTGTTGTTTCAGA+TGG | - | tig0016063:17566-17585 | Msa1357350:intron | 35.0% |
| !! | ATGCATGTGTTGTTTCAGAT+GGG | - | tig0016063:17567-17586 | Msa1357350:intron | 35.0% |
| GTTATTTATCACTAGCAGTC+AGG | + | tig0016063:18007-18026 | None:intergenic | 35.0% | |
| GACTGCTAGTGATAAATAAC+TGG | - | tig0016063:18007-18026 | Msa1357350:CDS | 35.0% | |
| !!! | TGTTATTTTGGAGTTGCAGA+CGG | + | tig0016063:18372-18391 | None:intergenic | 35.0% |
| GTTATGGGATGATGTTAAGA+AGG | - | tig0016063:18585-18604 | Msa1357350:intron | 35.0% | |
| ! | GATTTGAAATGCAGGTAAGT+TGG | - | tig0016063:18748-18767 | Msa1357350:CDS | 35.0% |
| GTATCAATGAATGTTTGTCC+TGG | + | tig0016063:18905-18924 | None:intergenic | 35.0% | |
| CAGTTTATCATGCAGTACAA+CGG | + | tig0016063:19030-19049 | None:intergenic | 35.0% | |
| ! | CAAAGAAACGTTGTCCTTTT+TGG | + | tig0016063:19128-19147 | None:intergenic | 35.0% |
| ! | AGACACCTTTCTCTCTTTTT+AGG | + | tig0016063:19162-19181 | None:intergenic | 35.0% |
| !! | GATCAAATCTTAAGAGCACT+TGG | + | tig0016063:19215-19234 | None:intergenic | 35.0% |
| TGCTCTTAAGATTTGATCAG+TGG | - | tig0016063:19217-19236 | Msa1357350:intron | 35.0% | |
| TTTGATAAGATGCAGAACTG+TGG | - | tig0016063:19323-19342 | Msa1357350:intron | 35.0% | |
| TACAACACGTTGACAGTATT+TGG | + | tig0016063:19360-19379 | None:intergenic | 35.0% | |
| GAGACAGATTGAACCTTTAA+AGG | + | tig0016063:19408-19427 | None:intergenic | 35.0% | |
| TAGCAGAATCAGGATTAATC+TGG | + | tig0016063:19658-19677 | None:intergenic | 35.0% | |
| TTGTATCCTTTAGCAGAATC+AGG | + | tig0016063:19668-19687 | None:intergenic | 35.0% | |
| ! | AGTCTATATTTGAAGCTACG+TGG | + | tig0016063:19748-19767 | None:intergenic | 35.0% |
| ! | TTTGCCCTAGTATCTTTTGA+TGG | - | tig0016063:19809-19828 | Msa1357350:intron | 35.0% |
| ! | TTGCCCTAGTATCTTTTGAT+GGG | - | tig0016063:19810-19829 | Msa1357350:intron | 35.0% |
| ! | TTTTGATGGGAATATTCGTC+AGG | - | tig0016063:19823-19842 | Msa1357350:intron | 35.0% |
| !! | GTGTTGACTGTGATAAATGA+CGG | - | tig0016063:19849-19868 | Msa1357350:intron | 35.0% |
| TTACCTCACTTGTCAATAAC+TGG | - | tig0016063:19927-19946 | Msa1357350:CDS | 35.0% | |
| TCAATATGGAAATTTGCCTG+AGG | - | tig0016063:20019-20038 | Msa1357350:intron | 35.0% | |
| ! | TGATAATGAGGAGTGTATCT+AGG | - | tig0016063:20216-20235 | Msa1357350:intron | 35.0% |
| TGTATCTAGGAGAAACAAGT+TGG | - | tig0016063:20229-20248 | Msa1357350:intron | 35.0% | |
| ! | TAGGAGAAACAAGTTGGAAA+AGG | - | tig0016063:20235-20254 | Msa1357350:intron | 35.0% |
| ! | AGGAGAAACAAGTTGGAAAA+GGG | - | tig0016063:20236-20255 | Msa1357350:intron | 35.0% |
| TTGTGCTCAAACAAACTTTC+AGG | + | tig0016063:20470-20489 | None:intergenic | 35.0% | |
| CACAAATCCTGCTTAGTTAA+AGG | - | tig0016063:20485-20504 | Msa1357350:intron | 35.0% | |
| TTATTGCCCTTTAACTAAGC+AGG | + | tig0016063:20495-20514 | None:intergenic | 35.0% | |
| CAGGTTGTCAATTGTGATAT+AGG | - | tig0016063:20686-20705 | Msa1357350:CDS | 35.0% | |
| GCATGCTTAAAAAACATGTC+AGG | - | tig0016063:20708-20727 | Msa1357350:CDS | 35.0% | |
| !! | AGATGATTGCTCTTGCTTTT+TGG | + | tig0016063:20806-20825 | None:intergenic | 35.0% |
| AACTCTCGTCTTTATATTCC+TGG | + | tig0016063:21190-21209 | None:intergenic | 35.0% | |
| !!! | AAAGACGAGAGTTTTATTCC+TGG | - | tig0016063:21197-21216 | Msa1357350:intron | 35.0% |
| !!! | AAGACGAGAGTTTTATTCCT+GGG | - | tig0016063:21198-21217 | Msa1357350:intron | 35.0% |
| TCTCAACCTTGTAACAAACA+TGG | - | tig0016063:21395-21414 | Msa1357350:intron | 35.0% | |
| ACTTGAAACAAACACTCACT+TGG | - | tig0016063:21464-21483 | Msa1357350:intron | 35.0% | |
| ACAAACACTCACTTGGAAAA+TGG | - | tig0016063:21471-21490 | Msa1357350:intron | 35.0% | |
| TGTGTATGTGTGATTGTGAA+GGG | + | tig0016063:21570-21589 | None:intergenic | 35.0% | |
| TTGTGTATGTGTGATTGTGA+AGG | + | tig0016063:21571-21590 | None:intergenic | 35.0% | |
| TGTTCTTTAACATGTGTCTC+AGG | - | tig0016063:21627-21646 | Msa1357350:intron | 35.0% | |
| TAAATGCCGTCATCAAATCA+GGG | + | tig0016063:21654-21673 | None:intergenic | 35.0% | |
| !!! | GTTGCCTTTTTTTCAAAGGA+AGG | - | tig0016063:21854-21873 | Msa1357350:intron | 35.0% |
| ! | GCTACCTTCCTTTGAAAAAA+AGG | + | tig0016063:21861-21880 | None:intergenic | 35.0% |
| AATCTAACAGATTCCGTCAT+TGG | + | tig0016063:22033-22052 | None:intergenic | 35.0% | |
| AAAGAGGGGAGACATTTAAT+TGG | - | tig0016063:22065-22084 | Msa1357350:CDS | 35.0% | |
| !!! | ATTTTGTTTGGTTTGAGGGA+AGG | - | tig0016063:22090-22109 | Msa1357350:intron | 35.0% |
| !!! | TTTTGTTTGGTTTGAGGGAA+GGG | - | tig0016063:22091-22110 | Msa1357350:intron | 35.0% |
| GGATAGTTCTTAAGATGAGA+AGG | - | tig0016063:22155-22174 | Msa1357350:intron | 35.0% | |
| ATATTGGACCAGATTCCTAT+CGG | + | tig0016063:22290-22309 | None:intergenic | 35.0% | |
| AGAAGAAGATAAGAGGAATG+GGG | + | tig0016063:22369-22388 | None:intergenic | 35.0% | |
| ATTTGAACACAGTCGTACAA+TGG | - | tig0016063:22405-22424 | Msa1357350:intron | 35.0% | |
| ATTCAGAAGACGGCTAAAAT+GGG | + | tig0016063:22463-22482 | None:intergenic | 35.0% | |
| TATGAAGAACCCTGCTAATT+TGG | - | tig0016063:22531-22550 | Msa1357350:intron | 35.0% | |
| TAAGCATCAAGCAAATCCTA+AGG | - | tig0016063:22555-22574 | Msa1357350:intron | 35.0% | |
| ! | CTCATCATTTTCGCAATTAC+AGG | + | tig0016063:22586-22605 | None:intergenic | 35.0% |
| GCGAAAATGATGAGCAAATT+TGG | - | tig0016063:22592-22611 | Msa1357350:CDS | 35.0% | |
| !! | AACATGCAGTTTTGATCACT+GGG | + | tig0016063:22635-22654 | None:intergenic | 35.0% |
| !! | AAACATGCAGTTTTGATCAC+TGG | + | tig0016063:22636-22655 | None:intergenic | 35.0% |
| GTTTGTGATTTCAGCATTCT+AGG | - | tig0016063:22652-22671 | Msa1357350:intron | 35.0% | |
| GAGCAATTTACCTACAAAAC+AGG | + | tig0016063:22772-22791 | None:intergenic | 35.0% | |
| CAACATAATGTTCTACTGAC+TGG | - | tig0016063:22810-22829 | Msa1357350:exon | 35.0% | |
| ! | ACTGAAGCATTTCATCGAAC+AGG | - | tig0016063:16894-16913 | Msa1357350:three_prime_UTR | 40.0% |
| GAAGAAGGAAAGTGAAGGAT+CGG | + | tig0016063:16944-16963 | None:intergenic | 40.0% | |
| TTAACCTTTCGAGATAGTCG+CGG | + | tig0016063:16966-16985 | None:intergenic | 40.0% | |
| ! | GGTTTGGAATAAGCAGATTC+AGG | + | tig0016063:17087-17106 | None:intergenic | 40.0% |
| ! | GGATTTATAGGTTACCGGTT+TGG | + | tig0016063:17103-17122 | None:intergenic | 40.0% |
| !! | TCGAAGTATTGTCACGGATA+CGG | - | tig0016063:17159-17178 | Msa1357350:intron | 40.0% |
| TGATGACATAGAGGATGTAG+AGG | - | tig0016063:17363-17382 | Msa1357350:intron | 40.0% | |
| AGAGGAAGAAAAAGTGAAGG+TGG | - | tig0016063:17381-17400 | Msa1357350:intron | 40.0% | |
| TGAATCTGATGTTGAGCTAG+AGG | - | tig0016063:17432-17451 | Msa1357350:intron | 40.0% | |
| GAATCTGATGTTGAGCTAGA+GGG | - | tig0016063:17433-17452 | Msa1357350:intron | 40.0% | |
| ! | TTTTGTGGAGGATCATCATC+AGG | + | tig0016063:17472-17491 | None:intergenic | 40.0% |
| ! | TGATGATGATCCTCCACAAA+AGG | - | tig0016063:17471-17490 | Msa1357350:intron | 40.0% |
| !! | TGAGTTTGAGGTTTGACTTG+AGG | - | tig0016063:17541-17560 | Msa1357350:intron | 40.0% |
| ACCTTCAGAAATAGCTTCCA+TGG | + | tig0016063:17655-17674 | None:intergenic | 40.0% | |
| TGGTTACTATTATTGGGAGG+TGG | - | tig0016063:17728-17747 | Msa1357350:intron | 40.0% | |
| TACTATTATTGGGAGGTGGA+TGG | - | tig0016063:17732-17751 | Msa1357350:intron | 40.0% | |
| !!! | ATTTTAAAACCCTAGGAGGC+TGG | - | tig0016063:17896-17915 | Msa1357350:intron | 40.0% |
| !!! | GAGCTTTTTCATCCCTTCTA+AGG | + | tig0016063:17930-17949 | None:intergenic | 40.0% |
| GTAACATGTTTACTGTTCGG+AGG | + | tig0016063:17956-17975 | None:intergenic | 40.0% | |
| ACTGGGAAGTAATCTAGTAG+TGG | - | tig0016063:18025-18044 | Msa1357350:intron | 40.0% | |
| AAGTAATCTAGTAGTGGCCA+GGG | - | tig0016063:18031-18050 | Msa1357350:intron | 40.0% | |
| CTTTAGGCCTCTTAACATGT+TGG | + | tig0016063:18062-18081 | None:intergenic | 40.0% | |
| AAAGGTTTGAACCTAAGACC+AGG | - | tig0016063:18163-18182 | Msa1357350:intron | 40.0% | |
| TGGTAGTACACTTGACTTCA+GGG | - | tig0016063:18246-18265 | Msa1357350:intron | 40.0% | |
| AGCATACTCGTCTGTCAATT+TGG | - | tig0016063:18305-18324 | Msa1357350:intron | 40.0% | |
| GCATACTCGTCTGTCAATTT+GGG | - | tig0016063:18306-18325 | Msa1357350:intron | 40.0% | |
| CATACTCGTCTGTCAATTTG+GGG | - | tig0016063:18307-18326 | Msa1357350:intron | 40.0% | |
| AACGTTACATTGTGACGAAG+TGG | + | tig0016063:18450-18469 | None:intergenic | 40.0% | |
| !! | AATATCTCGACTGTTTTGGG+TGG | - | tig0016063:18677-18696 | Msa1357350:CDS | 40.0% |
| ! | TTGAAATGCAGGTAAGTTGG+AGG | - | tig0016063:18751-18770 | Msa1357350:CDS | 40.0% |
| ACCTCTGTTCGCATACATTA+TGG | + | tig0016063:18825-18844 | None:intergenic | 40.0% | |
| CTAAAGCAGCATTTGCATCA+CGG | + | tig0016063:18988-19007 | None:intergenic | 40.0% | |
| !! | TGATGCAAATGCTGCTTTAG+AGG | - | tig0016063:18988-19007 | Msa1357350:intron | 40.0% |
| GTAACTGCAATCTGATATGC+AGG | - | tig0016063:19604-19623 | Msa1357350:intron | 40.0% | |
| TCAATAACTGGACGTGGTAT+GGG | - | tig0016063:19939-19958 | Msa1357350:CDS | 40.0% | |
| CCTGCTTAATATAGATCCTC+AGG | + | tig0016063:20038-20057 | None:intergenic | 40.0% | |
| CCTGAGGATCTATATTAAGC+AGG | - | tig0016063:20035-20054 | Msa1357350:intron | 40.0% | |
| ATCCATGACTATGTACACCA+TGG | + | tig0016063:20109-20128 | None:intergenic | 40.0% | |
| ! | GGAGAAACAAGTTGGAAAAG+GGG | - | tig0016063:20237-20256 | Msa1357350:intron | 40.0% |
| ! | GGGGTGATATTTTCAGCATT+TGG | - | tig0016063:20256-20275 | Msa1357350:intron | 40.0% |
| TTTCAGCATTTGGCTACTTG+AGG | - | tig0016063:20266-20285 | Msa1357350:intron | 40.0% | |
| ATGTTCGTCCAACCAATTCT+AGG | - | tig0016063:20405-20424 | Msa1357350:intron | 40.0% | |
| TGTTGTGATTGCAGATGGTA+TGG | + | tig0016063:20447-20466 | None:intergenic | 40.0% | |
| GGGCAATAAGTTGTGTTCAA+TGG | - | tig0016063:20506-20525 | Msa1357350:intron | 40.0% | |
| ATTACAGGCTGCATATGAGA+AGG | - | tig0016063:20780-20799 | Msa1357350:intron | 40.0% | |
| TCATCTTCCAGTAGAAATCC+AGG | - | tig0016063:20820-20839 | Msa1357350:intron | 40.0% | |
| TTCCTGGATATGTTGTTCCT+GGG | + | tig0016063:21174-21193 | None:intergenic | 40.0% | |
| ATTCCTGGATATGTTGTTCC+TGG | + | tig0016063:21175-21194 | None:intergenic | 40.0% | |
| TTCCTAGGAATACATGGGTA+GGG | + | tig0016063:21432-21451 | None:intergenic | 40.0% | |
| ATTCCTAGGAATACATGGGT+AGG | + | tig0016063:21433-21452 | None:intergenic | 40.0% | |
| AATAGAGTCCCACAAATGGA+AGG | + | tig0016063:21527-21546 | None:intergenic | 40.0% | |
| ATCGAATAGAGTCCCACAAA+TGG | + | tig0016063:21531-21550 | None:intergenic | 40.0% | |
| ATTTGTGGGACTCTATTCGA+TGG | - | tig0016063:21530-21549 | Msa1357350:intron | 40.0% | |
| TTTGTGGGACTCTATTCGAT+GGG | - | tig0016063:21531-21550 | Msa1357350:intron | 40.0% | |
| CTAAATGCCGTCATCAAATC+AGG | + | tig0016063:21655-21674 | None:intergenic | 40.0% | |
| !!! | GGCAGTTGCCTTTTTTTCAA+AGG | - | tig0016063:21850-21869 | Msa1357350:intron | 40.0% |
| TGATTTCCATAGAGACCATG+TGG | - | tig0016063:22006-22025 | Msa1357350:intron | 40.0% | |
| GGTAGATAACTCCTCTTGTT+TGG | - | tig0016063:22121-22140 | Msa1357350:intron | 40.0% | |
| TTTGTCAACCATCAACCGAT+AGG | - | tig0016063:22272-22291 | Msa1357350:CDS | 40.0% | |
| TAAGAGGAATGGGGAAAGAA+GGG | + | tig0016063:22360-22379 | None:intergenic | 40.0% | |
| ATAAGAGGAATGGGGAAAGA+AGG | + | tig0016063:22361-22380 | None:intergenic | 40.0% | |
| ACGGCTAAAATGGGCATATA+CGG | + | tig0016063:22454-22473 | None:intergenic | 40.0% | |
| CATTCAGAAGACGGCTAAAA+TGG | + | tig0016063:22464-22483 | None:intergenic | 40.0% | |
| GATGCTTAGCCAAATTAGCA+GGG | + | tig0016063:22543-22562 | None:intergenic | 40.0% | |
| TGATGCTTAGCCAAATTAGC+AGG | + | tig0016063:22544-22563 | None:intergenic | 40.0% | |
| ! | TTATGCAAGGCCTGTTTTGT+AGG | - | tig0016063:22759-22778 | Msa1357350:CDS | 40.0% |
| !! | CGAAGTATTGTCACGGATAC+GGG | - | tig0016063:17160-17179 | Msa1357350:intron | 45.0% |
| ! | GGAGAGTGATGATGACATAG+AGG | - | tig0016063:17354-17373 | Msa1357350:intron | 45.0% |
| GGAAGAAAAAGTGAAGGTGG+AGG | - | tig0016063:17384-17403 | Msa1357350:intron | 45.0% | |
| AGGATCATCATCAGGCTCAA+CGG | + | tig0016063:17464-17483 | None:intergenic | 45.0% | |
| GATGGGAGACTCTTCTATTG+AGG | - | tig0016063:17584-17603 | Msa1357350:intron | 45.0% | |
| GTTGGCTAAAGCTAAAGCCA+TGG | - | tig0016063:17635-17654 | Msa1357350:intron | 45.0% | |
| !! | GCCATGGAAGCTATTTCTGA+AGG | - | tig0016063:17651-17670 | Msa1357350:intron | 45.0% |
| GAAGTAATCTAGTAGTGGCC+AGG | - | tig0016063:18030-18049 | Msa1357350:intron | 45.0% | |
| AAGATGATAGCCTCGAATCC+TGG | + | tig0016063:18184-18203 | None:intergenic | 45.0% | |
| ATCTTGACAAAGCCCTAGCT+TGG | - | tig0016063:18199-18218 | Msa1357350:intron | 45.0% | |
| CTGGTAGTACACTTGACTTC+AGG | - | tig0016063:18245-18264 | Msa1357350:intron | 45.0% | |
| GACATCTCTTGTGTTGAGTC+TGG | - | tig0016063:18344-18363 | Msa1357350:intron | 45.0% | |
| GTTACATTGTGACGAAGTGG+TGG | + | tig0016063:18447-18466 | None:intergenic | 45.0% | |
| ! | AAATGCAGGTAAGTTGGAGG+AGG | - | tig0016063:18754-18773 | Msa1357350:CDS | 45.0% |
| GCATACATTATGGCAGAGGT+AGG | + | tig0016063:18815-18834 | None:intergenic | 45.0% | |
| GTTCGCATACATTATGGCAG+AGG | + | tig0016063:18819-18838 | None:intergenic | 45.0% | |
| GCCATAATGTATGCGAACAG+AGG | - | tig0016063:18821-18840 | Msa1357350:CDS | 45.0% | |
| TATCATGCAGTACAACGGAG+AGG | + | tig0016063:19025-19044 | None:intergenic | 45.0% | |
| GCGAACCCTACATTCGAATA+CGG | - | tig0016063:19469-19488 | Msa1357350:intron | 45.0% | |
| AACCCTACATTCGAATACGG+TGG | - | tig0016063:19472-19491 | Msa1357350:intron | 45.0% | |
| CACCACCGTATTCGAATGTA+GGG | + | tig0016063:19477-19496 | None:intergenic | 45.0% | |
| ACACCACCGTATTCGAATGT+AGG | + | tig0016063:19478-19497 | None:intergenic | 45.0% | |
| TACATTCGAATACGGTGGTG+TGG | - | tig0016063:19477-19496 | Msa1357350:intron | 45.0% | |
| GCTAAAGGATACAAGTCACG+TGG | - | tig0016063:19674-19693 | Msa1357350:intron | 45.0% | |
| CGTCCAGTTATTGACAAGTG+AGG | + | tig0016063:19933-19952 | None:intergenic | 45.0% | |
| CACTTGTCAATAACTGGACG+TGG | - | tig0016063:19933-19952 | Msa1357350:CDS | 45.0% | |
| GTCAATAACTGGACGTGGTA+TGG | - | tig0016063:19938-19957 | Msa1357350:CDS | 45.0% | |
| TACCTAAGTAGATGCCACCA+TGG | - | tig0016063:20089-20108 | Msa1357350:intron | 45.0% | |
| CATGACTATGTACACCATGG+TGG | + | tig0016063:20106-20125 | None:intergenic | 45.0% | |
| CACCATGGTGTACATAGTCA+TGG | - | tig0016063:20104-20123 | Msa1357350:intron | 45.0% | |
| CAACACTTCAGTAGTCGCAA+AGG | - | tig0016063:20174-20193 | Msa1357350:intron | 45.0% | |
| ! | TCAGGTGTTGTGATTGCAGA+TGG | + | tig0016063:20452-20471 | None:intergenic | 45.0% |
| ! | AACACCGTCGGAAGTATGAT+AGG | - | tig0016063:20600-20619 | Msa1357350:intron | 45.0% |
| GCAACCTATCATACTTCCGA+CGG | + | tig0016063:20607-20626 | None:intergenic | 45.0% | |
| AGAAAAAAGCTGAGCGTGAG+AGG | - | tig0016063:20642-20661 | Msa1357350:intron | 45.0% | |
| TCTTCCAGTAGAAATCCAGG+AGG | - | tig0016063:20823-20842 | Msa1357350:intron | 45.0% | |
| TGTTCTTTCCCTCTCACACT+TGG | - | tig0016063:21118-21137 | Msa1357350:intron | 45.0% | |
| GTTCTTTCCCTCTCACACTT+GGG | - | tig0016063:21119-21138 | Msa1357350:intron | 45.0% | |
| TTCTTTCCCTCTCACACTTG+GGG | - | tig0016063:21120-21139 | Msa1357350:intron | 45.0% | |
| CACGGACTCAAATTATTCCC+AGG | - | tig0016063:21154-21173 | Msa1357350:intron | 45.0% | |
| TTCCCAGGAACAACATATCC+AGG | - | tig0016063:21169-21188 | Msa1357350:intron | 45.0% | |
| TTCCCTACCCATGTATTCCT+AGG | - | tig0016063:21427-21446 | Msa1357350:intron | 45.0% | |
| TTGTGGGACTCTATTCGATG+GGG | - | tig0016063:21532-21551 | Msa1357350:intron | 45.0% | |
| ! | TCAGGACCCTGATTTGATGA+CGG | - | tig0016063:21645-21664 | Msa1357350:intron | 45.0% |
| TGAAGAGCAGCCATAACTTC+TGG | + | tig0016063:21682-21701 | None:intergenic | 45.0% | |
| GTTATGGCTGCTCTTCAAGA+TGG | - | tig0016063:21685-21704 | Msa1357350:intron | 45.0% | |
| ATTGGTCCACATGGTCTCTA+TGG | + | tig0016063:22015-22034 | None:intergenic | 45.0% | |
| ACCATCAACCGATAGGAATC+TGG | - | tig0016063:22279-22298 | Msa1357350:CDS | 45.0% | |
| ! | ACCAGATTCCTATCGGTTGA+TGG | + | tig0016063:22283-22302 | None:intergenic | 45.0% |
| AAGAGGAATGGGGAAAGAAG+GGG | + | tig0016063:22359-22378 | None:intergenic | 45.0% | |
| ! | ATGAGCAAATTTGGAGGTGC+TGG | - | tig0016063:22601-22620 | Msa1357350:CDS | 45.0% |
| !!! | GTTTTTTTATTATATTTTTA+TGG | - | tig0016063:17708-17727 | Msa1357350:intron | 5.0% |
| !!! | TTGTATTTTATAATAAAATA+TGG | - | tig0016063:20540-20559 | Msa1357350:intron | 5.0% |
| !!! | ATTTTAAAAAAAAAATTGTT+TGG | - | tig0016063:21222-21241 | Msa1357350:intron | 5.0% |
| !!! | CGCGGCGTGTTGTTTTCTTT+GGG | + | tig0016063:16828-16847 | None:intergenic | 50.0% |
| AGTCACAGTCTCACACACGA+TGG | - | tig0016063:16852-16871 | Msa1357350:three_prime_UTR | 50.0% | |
| ATCGGCGAGAGTTGAAGGAT+TGG | + | tig0016063:16926-16945 | None:intergenic | 50.0% | |
| TCGCGGAAGAAGGAAAGTGA+AGG | + | tig0016063:16949-16968 | None:intergenic | 50.0% | |
| TTCGAGATAGTCGCGGAAGA+AGG | + | tig0016063:16959-16978 | None:intergenic | 50.0% | |
| TCTTCCGCGACTATCTCGAA+AGG | - | tig0016063:16959-16978 | Msa1357350:three_prime_UTR | 50.0% | |
| GTCTCAGACACGTCTTCGAT+CGG | - | tig0016063:17258-17277 | Msa1357350:intron | 50.0% | |
| !! | GATCGGAAGTGTCAGTGCTA+TGG | - | tig0016063:17275-17294 | Msa1357350:intron | 50.0% |
| AGTGAAGGTGGAGGAAGTAG+AGG | - | tig0016063:17393-17412 | Msa1357350:intron | 50.0% | |
| ! | CTGGACTGGGATCCTTAGAA+GGG | - | tig0016063:17915-17934 | Msa1357350:intron | 50.0% |
| TAATCTAGTAGTGGCCAGGG+TGG | - | tig0016063:18034-18053 | Msa1357350:intron | 50.0% | |
| AATCTAGTAGTGGCCAGGGT+GGG | - | tig0016063:18035-18054 | Msa1357350:intron | 50.0% | |
| TTAACATGTTGGACCCACCC+TGG | + | tig0016063:18051-18070 | None:intergenic | 50.0% | |
| GGTGGGTCCAACATGTTAAG+AGG | - | tig0016063:18052-18071 | Msa1357350:intron | 50.0% | |
| GAACCTAAGACCAGGATTCG+AGG | - | tig0016063:18171-18190 | Msa1357350:intron | 50.0% | |
| ! | TAGCCTCGAATCCTGGTCTT+AGG | + | tig0016063:18177-18196 | None:intergenic | 50.0% |
| AAGCCCTAGCTTGGACTGAT+TGG | - | tig0016063:18208-18227 | Msa1357350:intron | 50.0% | |
| CTGGTATGAATCAAGTGCCC+TGG | + | tig0016063:18522-18541 | None:intergenic | 50.0% | |
| ! | GCATCACGGATTGCAGCATT+AGG | + | tig0016063:18974-18993 | None:intergenic | 50.0% |
| TTCGAATACGGTGGTGTGGA+TGG | - | tig0016063:19481-19500 | Msa1357350:intron | 50.0% | |
| ACGAGCGATGTTAGGTCAGT+GGG | - | tig0016063:19703-19722 | Msa1357350:intron | 50.0% | |
| GGTGGCATCTACTTAGGTAC+CGG | + | tig0016063:20088-20107 | None:intergenic | 50.0% | |
| CACCATGGTGGCATCTACTT+AGG | + | tig0016063:20094-20113 | None:intergenic | 50.0% | |
| ACCAAATGCCCACAAGCTTG+AGG | - | tig0016063:20577-20596 | Msa1357350:intron | 50.0% | |
| TCCTCAAGCTTGTGGGCATT+TGG | + | tig0016063:20581-20600 | None:intergenic | 50.0% | |
| ACGGTGTTCCTCAAGCTTGT+GGG | + | tig0016063:20588-20607 | None:intergenic | 50.0% | |
| ACAAGCTTGAGGAACACCGT+CGG | - | tig0016063:20588-20607 | Msa1357350:intron | 50.0% | |
| TGACAACCTGAGCTTCAGCA+CGG | + | tig0016063:20676-20695 | None:intergenic | 50.0% | |
| CATGCCTCCTGGATTTCTAC+TGG | + | tig0016063:20830-20849 | None:intergenic | 50.0% | |
| TCTTTCCCTCTCACACTTGG+GGG | - | tig0016063:21121-21140 | Msa1357350:intron | 50.0% | |
| GAGACCATGTGGACCAATGA+CGG | - | tig0016063:22017-22036 | Msa1357350:intron | 50.0% | |
| GATTCCGTCATTGGTCCACA+TGG | + | tig0016063:22024-22043 | None:intergenic | 50.0% | |
| GTTTGAGGGAAGGGATGAGA+GGG | - | tig0016063:22100-22119 | Msa1357350:intron | 50.0% | |
| AGAGGAATGGGGAAAGAAGG+GGG | + | tig0016063:22358-22377 | None:intergenic | 50.0% | |
| GCAATTACAGGCGCAACCTT+AGG | + | tig0016063:22574-22593 | None:intergenic | 50.0% | |
| !! | AAATTTGGAGGTGCTGGTGC+TGG | - | tig0016063:22607-22626 | Msa1357350:intron | 50.0% |
| !!! | GCGCGGCGTGTTGTTTTCTT+TGG | + | tig0016063:16829-16848 | None:intergenic | 55.0% |
| CGTGTGTGAGACTGTGACTG+CGG | + | tig0016063:16851-16870 | None:intergenic | 55.0% | |
| GAAGGATCGGCGAGAGTTGA+AGG | + | tig0016063:16931-16950 | None:intergenic | 55.0% | |
| CGACACTGACACGTTGACAC+CGG | - | tig0016063:17186-17205 | Msa1357350:intron | 55.0% | |
| GAAGGTGGAGGAAGTAGAGG+AGG | - | tig0016063:17396-17415 | Msa1357350:intron | 55.0% | |
| GAGTCGCGAGTCTTCACAGT+TGG | - | tig0016063:17617-17636 | Msa1357350:intron | 55.0% | |
| AAAACCCTAGGAGGCTGGAC+TGG | - | tig0016063:17901-17920 | Msa1357350:intron | 55.0% | |
| AAACCCTAGGAGGCTGGACT+GGG | - | tig0016063:17902-17921 | Msa1357350:intron | 55.0% | |
| ! | GCTGGACTGGGATCCTTAGA+AGG | - | tig0016063:17914-17933 | Msa1357350:intron | 55.0% |
| GGGCCAATCAGTCCAAGCTA+GGG | + | tig0016063:18214-18233 | None:intergenic | 55.0% | |
| AGGGCCAATCAGTCCAAGCT+AGG | + | tig0016063:18215-18234 | None:intergenic | 55.0% | |
| ! | AGCTTGGACTGATTGGCCCT+TGG | - | tig0016063:18215-18234 | Msa1357350:intron | 55.0% |
| ! | GCTTGGACTGATTGGCCCTT+GGG | - | tig0016063:18216-18235 | Msa1357350:intron | 55.0% |
| !! | TACTACCAGTGCCGACCCAA+GGG | + | tig0016063:18234-18253 | None:intergenic | 55.0% |
| TACGGTGGTGTGGATGGAGA+TGG | - | tig0016063:19487-19506 | Msa1357350:intron | 55.0% | |
| GGCATAGCACGAGCGATGTT+AGG | - | tig0016063:19695-19714 | Msa1357350:intron | 55.0% | |
| CACGAGCGATGTTAGGTCAG+TGG | - | tig0016063:19702-19721 | Msa1357350:intron | 55.0% | |
| GATGTTAGGTCAGTGGGCAG+AGG | - | tig0016063:19709-19728 | Msa1357350:intron | 55.0% | |
| GACGGTGTTCCTCAAGCTTG+TGG | + | tig0016063:20589-20608 | None:intergenic | 55.0% | |
| ! | AGAAATCCAGGAGGCATGCC+TGG | - | tig0016063:20832-20851 | Msa1357350:intron | 55.0% |
| CTTTCCCTCTCACACTTGGG+GGG | - | tig0016063:21122-21141 | Msa1357350:intron | 55.0% | |
| AACACCCCCCAAGTGTGAGA+GGG | + | tig0016063:21129-21148 | None:intergenic | 55.0% | |
| !! | CTTGGGGGGTGTTCGTTTCA+CGG | - | tig0016063:21136-21155 | Msa1357350:intron | 55.0% |
| GGTTTGAGGGAAGGGATGAG+AGG | - | tig0016063:22099-22118 | Msa1357350:intron | 55.0% | |
| GATCCCAGTCCAGCCTCCTA+GGG | + | tig0016063:17908-17927 | None:intergenic | 60.0% | |
| ! | GGACTGATTGGCCCTTGGGT+CGG | - | tig0016063:18220-18239 | Msa1357350:intron | 60.0% |
| !! | GTACTACCAGTGCCGACCCA+AGG | + | tig0016063:18235-18254 | None:intergenic | 60.0% |
| TCAGTGGGCAGAGGCTGCAA+AGG | - | tig0016063:19718-19737 | Msa1357350:intron | 60.0% | |
| ! | AATCCAGGAGGCATGCCTGG+TGG | - | tig0016063:20835-20854 | Msa1357350:intron | 60.0% |
| ! | ATCCAGGAGGCATGCCTGGT+GGG | - | tig0016063:20836-20855 | Msa1357350:intron | 60.0% |
| !! | ATGCCTGGTGGGTTTCCTGG+TGG | - | tig0016063:20847-20866 | Msa1357350:intron | 60.0% |
| ATGCCACCAGGAAACCCACC+AGG | + | tig0016063:20853-20872 | None:intergenic | 60.0% | |
| TTTCCTGGTGGCATGCCTGG+TGG | - | tig0016063:20859-20878 | Msa1357350:CDS | 60.0% | |
| TTCCTGGTGGCATGCCTGGT+GGG | - | tig0016063:20860-20879 | Msa1357350:CDS | 60.0% | |
| !! | ATGCCTGGTGGGTTTCCTGG+TGG | - | tig0016063:20847-20866 | Msa1357350:intron | 60.0% |
| ATGCCACCAGGAAACCCACC+AGG | + | tig0016063:20853-20872 | None:intergenic | 60.0% | |
| TTTCCTGGTGGCATGCCAGG+TGG | - | tig0016063:20883-20902 | Msa1357350:CDS | 60.0% | |
| TTCCTGGTGGCATGCCAGGT+GGG | - | tig0016063:20884-20903 | Msa1357350:CDS | 60.0% | |
| ACATTTCCAGGCACCCCTCC+TGG | + | tig0016063:21021-21040 | None:intergenic | 60.0% | |
| GAACACCCCCCAAGTGTGAG+AGG | + | tig0016063:21130-21149 | None:intergenic | 60.0% | |
| GTGAGACTGTGACTGCGGCG+CGG | + | tig0016063:16846-16865 | None:intergenic | 65.0% | |
| GGATCCCAGTCCAGCCTCCT+AGG | + | tig0016063:17909-17928 | None:intergenic | 65.0% | |
| ATTGGCCCTTGGGTCGGCAC+TGG | - | tig0016063:18226-18245 | Msa1357350:intron | 65.0% | |
| ACGTCGCCGTGCTGAAGCTC+AGG | - | tig0016063:20667-20686 | Msa1357350:intron | 65.0% | |
| AACCCACCAGGCATGCCTCC+TGG | + | tig0016063:20841-20860 | None:intergenic | 65.0% | |
| !! | GGCATGCCTGGTGGGTTTCC+TGG | - | tig0016063:20844-20863 | Msa1357350:intron | 65.0% |
| GGGTTTCCTGGTGGCATGCC+TGG | - | tig0016063:20856-20875 | Msa1357350:CDS | 65.0% | |
| AACCCACCAGGCATGCCACC+AGG | + | tig0016063:20865-20884 | None:intergenic | 65.0% | |
| !! | GGCATGCCTGGTGGGTTTCC+TGG | - | tig0016063:20844-20863 | Msa1357350:intron | 65.0% |
| GGGTTTCCTGGTGGCATGCC+AGG | - | tig0016063:20856-20875 | Msa1357350:CDS | 65.0% | |
| AACCCACCTGGCATGCCACC+AGG | + | tig0016063:20889-20908 | None:intergenic | 65.0% | |
| CAGGCATGCCTCCAGCTCCA+GGG | + | tig0016063:20912-20931 | None:intergenic | 65.0% | |
| GGCATGCCTGGTGGTTTCCC+TGG | - | tig0016063:20922-20941 | Msa1357350:intron | 65.0% | |
| CCAGCTCCAGGGAAACCACC+AGG | + | tig0016063:20931-20950 | None:intergenic | 65.0% | |
| CCTGGTGGTTTCCCTGGAGC+TGG | - | tig0016063:20928-20947 | Msa1357350:intron | 65.0% | |
| GGTGGTTTCCCTGGAGCTGG+AGG | - | tig0016063:20931-20950 | Msa1357350:intron | 65.0% | |
| CTGGCATGCCTCCAGCTCCA+GGG | + | tig0016063:20942-20961 | None:intergenic | 65.0% | |
| CTGGCATGCCTCCAGCTCCA+GGG | + | tig0016063:20942-20961 | None:intergenic | 65.0% | |
| CAGGTGGCTTCCCTGGTGCT+GGG | - | tig0016063:20989-21008 | Msa1357350:intron | 65.0% | |
| ! | AGGTGGCTTCCCTGGTGCTG+GGG | - | tig0016063:20990-21009 | Msa1357350:intron | 65.0% |
| ! | GGCATGCCAGGTGGGTTCCC+TGG | - | tig0016063:20892-20911 | Msa1357350:CDS | 70.0% |
| CCAGCTCCAGGGAACCCACC+TGG | + | tig0016063:20901-20920 | None:intergenic | 70.0% | |
| ! | CCAGGTGGGTTCCCTGGAGC+TGG | - | tig0016063:20898-20917 | Msa1357350:CDS | 70.0% |
| ! | GGTGGGTTCCCTGGAGCTGG+AGG | - | tig0016063:20901-20920 | Msa1357350:CDS | 70.0% |
| CCAGGCATGCCTCCAGCTCC+AGG | + | tig0016063:20913-20932 | None:intergenic | 70.0% | |
| ! | CCTGGAGCTGGAGGCATGCC+TGG | - | tig0016063:20910-20929 | Msa1357350:CDS | 70.0% |
| ! | GGAGCTGGAGGCATGCCTGG+TGG | - | tig0016063:20913-20932 | Msa1357350:intron | 70.0% |
| CCTGGCATGCCTCCAGCTCC+AGG | + | tig0016063:20943-20962 | None:intergenic | 70.0% | |
| ! | CCTGGAGCTGGAGGCATGCC+AGG | - | tig0016063:20910-20929 | Msa1357350:CDS | 70.0% |
| ! | GGAGCTGGAGGCATGCCAGG+TGG | - | tig0016063:20943-20962 | Msa1357350:intron | 70.0% |
| GGCATGCCAGGTGGCTTCCC+TGG | - | tig0016063:20952-20971 | Msa1357350:intron | 70.0% | |
| CCAGCTCCAGGGAAGCCACC+TGG | + | tig0016063:20961-20980 | None:intergenic | 70.0% | |
| CCAGGTGGCTTCCCTGGAGC+TGG | - | tig0016063:20958-20977 | Msa1357350:intron | 70.0% | |
| GGTGGCTTCCCTGGAGCTGG+AGG | - | tig0016063:20961-20980 | Msa1357350:intron | 70.0% | |
| CCTGGCATGCCTCCAGCTCC+AGG | + | tig0016063:20943-20962 | None:intergenic | 70.0% | |
| ! | CCTGGAGCTGGAGGCATGCC+AGG | - | tig0016063:20910-20929 | Msa1357350:CDS | 70.0% |
| ! | GGAGCTGGAGGCATGCCAGG+TGG | - | tig0016063:20943-20962 | Msa1357350:intron | 70.0% |
| GGCATGCCAGGTGGCTTCCC+TGG | - | tig0016063:20952-20971 | Msa1357350:intron | 70.0% | |
| CCAGCACCAGGGAAGCCACC+TGG | + | tig0016063:20991-21010 | None:intergenic | 70.0% | |
| CCAGGTGGCTTCCCTGGTGC+TGG | - | tig0016063:20988-21007 | Msa1357350:intron | 70.0% | |
| ! | GGTGGCTTCCCTGGTGCTGG+GGG | - | tig0016063:20991-21010 | Msa1357350:intron | 70.0% |
| CTGGCATGCCCCCAGCACCA+GGG | + | tig0016063:21002-21021 | None:intergenic | 70.0% | |
| ! | GTGCTGGGGGCATGCCAGGA+GGG | - | tig0016063:21004-21023 | Msa1357350:intron | 70.0% |
| ! | TGCTGGGGGCATGCCAGGAG+GGG | - | tig0016063:21005-21024 | Msa1357350:intron | 70.0% |
| CCTGGCATGCCCCCAGCACC+AGG | + | tig0016063:21003-21022 | None:intergenic | 75.0% | |
| ! | CCTGGTGCTGGGGGCATGCC+AGG | - | tig0016063:21000-21019 | Msa1357350:intron | 75.0% |
| ! | GGTGCTGGGGGCATGCCAGG+AGG | - | tig0016063:21003-21022 | Msa1357350:intron | 75.0% |
| !! | GGCATGCCAGGAGGGGTGCC+TGG | - | tig0016063:21012-21031 | Msa1357350:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016063 | gene | 16824 | 22867 | 16824 | ID=Msa1357350;Name=Msa1357350 |
| tig0016063 | mRNA | 16824 | 22867 | 16824 | ID=Msa1357350-mRNA-1;Parent=Msa1357350;Name=Msa1357350-mRNA-1;_AED=0.11;_eAED=0.11;_QI=47|1|0.90|1|1|1|11|228|410 |
| tig0016063 | exon | 16824 | 17161 | 16824 | ID=Msa1357350-mRNA-1:exon:10392;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 17985 | 18042 | 17985 | ID=Msa1357350-mRNA-1:exon:10391;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 18629 | 18904 | 18629 | ID=Msa1357350-mRNA-1:exon:10390;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 19003 | 19119 | 19003 | ID=Msa1357350-mRNA-1:exon:10389;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 19892 | 20032 | 19892 | ID=Msa1357350-mRNA-1:exon:10388;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 20682 | 20746 | 20682 | ID=Msa1357350-mRNA-1:exon:10387;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 20849 | 20929 | 20849 | ID=Msa1357350-mRNA-1:exon:10386;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 22019 | 22106 | 22019 | ID=Msa1357350-mRNA-1:exon:10385;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 22199 | 22345 | 22199 | ID=Msa1357350-mRNA-1:exon:10384;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 22584 | 22623 | 22584 | ID=Msa1357350-mRNA-1:exon:10383;Parent=Msa1357350-mRNA-1 |
| tig0016063 | exon | 22711 | 22867 | 22711 | ID=Msa1357350-mRNA-1:exon:10382;Parent=Msa1357350-mRNA-1 |
| tig0016063 | five_prime_UTR | 22821 | 22867 | 22821 | ID=Msa1357350-mRNA-1:five_prime_utr;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 22711 | 22820 | 22711 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 22584 | 22623 | 22584 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 22199 | 22345 | 22199 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 22019 | 22106 | 22019 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 20849 | 20929 | 20849 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 20682 | 20746 | 20682 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 19892 | 20032 | 19892 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 19003 | 19119 | 19003 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 18629 | 18904 | 18629 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 17985 | 18042 | 17985 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | CDS | 17052 | 17161 | 17052 | ID=Msa1357350-mRNA-1:cds;Parent=Msa1357350-mRNA-1 |
| tig0016063 | three_prime_UTR | 16824 | 17051 | 16824 | ID=Msa1357350-mRNA-1:three_prime_utr;Parent=Msa1357350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
