Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0468890 | XP_003601902.1 | 98.728 | 393 | 5 | 0 | 1 | 393 | 1 | 393 | 0.0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0468890 | G7J360 | 98.728 | 393 | 5 | 0 | 1 | 393 | 1 | 393 | 0.0 | 808 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0117520 | Msa0468890 | 0.807864 | 4.104473e-50 | -8.615850e-47 |
| Msa0160960 | Msa0468890 | 0.824712 | 6.956864e-54 | -8.615850e-47 |
| Msa0422700 | Msa0468890 | 0.806952 | 6.407531e-50 | -8.615850e-47 |
| Msa0423510 | Msa0468890 | 0.835550 | 1.571891e-56 | -8.615850e-47 |
| Msa0434180 | Msa0468890 | 0.801971 | 7.000175e-49 | -8.615850e-47 |
| Msa0468890 | Msa0545050 | 0.808509 | 2.991431e-50 | -8.615850e-47 |
| Msa0468890 | Msa0567520 | 0.807265 | 5.500605e-50 | -8.615850e-47 |
| Msa0468890 | Msa0614920 | 0.811297 | 7.511873e-51 | -8.615850e-47 |
| Msa0468890 | Msa0642730 | 0.820342 | 7.214814e-53 | -8.615850e-47 |
| Msa0468890 | Msa0673120 | 0.821980 | 3.026100e-53 | -8.615850e-47 |
| Msa0468890 | Msa0741440 | 0.800683 | 1.284412e-48 | -8.615850e-47 |
| Msa0468890 | Msa0888260 | 0.804572 | 2.025733e-49 | -8.615850e-47 |
| Msa0468890 | Msa1122150 | 0.821747 | 3.426240e-53 | -8.615850e-47 |
| Msa0468890 | Msa1231840 | 0.817854 | 2.657579e-52 | -8.615850e-47 |
| Msa0468890 | Msa1246360 | 0.804346 | 2.257783e-49 | -8.615850e-47 |
| Msa0468890 | Msa1346840 | 0.831181 | 1.930618e-55 | -8.615850e-47 |
| Msa0468890 | Msa1352280 | -0.816506 | 5.339657e-52 | -8.615850e-47 |
| Msa0468890 | Msa1369920 | -0.813707 | 2.233044e-51 | -8.615850e-47 |
| Msa0468890 | Msa1386890 | 0.800188 | 1.620462e-48 | -8.615850e-47 |
| Msa0468890 | Msa1410550 | 0.820044 | 8.443485e-53 | -8.615850e-47 |
| Msa0468890 | Msa1437730 | 0.812420 | 4.277258e-51 | -8.615850e-47 |
| Msa0318680 | Msa0468890 | 0.804866 | 1.758554e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0468890 | MtrunA17_Chr3g0123571 | 98.728 | 393 | 5 | 0 | 1 | 393 | 1 | 393 | 0.0 | 808 |
| Msa0468890 | MtrunA17_Chr8g0381601 | 79.177 | 389 | 80 | 1 | 1 | 389 | 1 | 388 | 0.0 | 665 |
| Msa0468890 | MtrunA17_Chr7g0227041 | 71.247 | 393 | 106 | 2 | 1 | 386 | 1 | 393 | 0.0 | 583 |
| Msa0468890 | MtrunA17_Chr8g0381611 | 73.629 | 383 | 97 | 1 | 7 | 389 | 2 | 380 | 0.0 | 578 |
| Msa0468890 | MtrunA17_Chr2g0326801 | 65.026 | 386 | 129 | 3 | 1 | 385 | 1 | 381 | 0.0 | 539 |
| Msa0468890 | MtrunA17_Chr4g0028891 | 61.330 | 406 | 113 | 3 | 25 | 386 | 1 | 406 | 0.0 | 516 |
| Msa0468890 | MtrunA17_Chr2g0281421 | 51.504 | 266 | 118 | 7 | 102 | 356 | 78 | 343 | 6.35e-88 | 271 |
| Msa0468890 | MtrunA17_Chr4g0047961 | 50.593 | 253 | 118 | 6 | 102 | 347 | 60 | 312 | 1.89e-84 | 261 |
| Msa0468890 | MtrunA17_Chr1g0189401 | 45.902 | 305 | 143 | 7 | 98 | 380 | 75 | 379 | 4.36e-83 | 259 |
| Msa0468890 | MtrunA17_Chr2g0276851 | 45.714 | 280 | 144 | 6 | 82 | 353 | 60 | 339 | 1.06e-80 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0468890 | AT1G67850.4 | 76.127 | 377 | 81 | 2 | 17 | 387 | 1 | 374 | 0.0 | 607 |
| Msa0468890 | AT1G67850.6 | 76.127 | 377 | 81 | 2 | 17 | 387 | 17 | 390 | 0.0 | 607 |
| Msa0468890 | AT1G67850.7 | 76.127 | 377 | 81 | 2 | 17 | 387 | 17 | 390 | 0.0 | 607 |
| Msa0468890 | AT1G67850.1 | 76.127 | 377 | 81 | 2 | 17 | 387 | 17 | 390 | 0.0 | 607 |
| Msa0468890 | AT1G67850.3 | 76.127 | 377 | 81 | 2 | 17 | 387 | 17 | 390 | 0.0 | 607 |
| Msa0468890 | AT1G67850.2 | 76.127 | 377 | 81 | 2 | 17 | 387 | 17 | 390 | 0.0 | 607 |
| Msa0468890 | AT1G67850.5 | 76.127 | 377 | 81 | 2 | 17 | 387 | 17 | 390 | 0.0 | 607 |
| Msa0468890 | AT3G27470.2 | 70.918 | 392 | 104 | 3 | 11 | 393 | 2 | 392 | 0.0 | 598 |
| Msa0468890 | AT3G27470.1 | 70.918 | 392 | 104 | 3 | 11 | 393 | 2 | 392 | 0.0 | 598 |
| Msa0468890 | AT3G27470.4 | 70.918 | 392 | 104 | 3 | 11 | 393 | 2 | 392 | 0.0 | 598 |
| Msa0468890 | AT3G27470.5 | 70.918 | 392 | 104 | 3 | 11 | 393 | 2 | 392 | 0.0 | 598 |
| Msa0468890 | AT3G27470.3 | 70.918 | 392 | 104 | 3 | 11 | 393 | 2 | 392 | 0.0 | 598 |
| Msa0468890 | AT1G13000.2 | 67.273 | 385 | 121 | 2 | 6 | 386 | 10 | 393 | 0.0 | 573 |
| Msa0468890 | AT1G13000.5 | 67.273 | 385 | 121 | 2 | 6 | 386 | 10 | 393 | 0.0 | 573 |
| Msa0468890 | AT1G13000.4 | 67.273 | 385 | 121 | 2 | 6 | 386 | 10 | 393 | 0.0 | 573 |
| Msa0468890 | AT1G13000.1 | 67.273 | 385 | 121 | 2 | 6 | 386 | 10 | 393 | 0.0 | 573 |
| Msa0468890 | AT2G28310.2 | 68.312 | 385 | 105 | 2 | 1 | 385 | 1 | 368 | 0.0 | 568 |
| Msa0468890 | AT2G28310.1 | 68.312 | 385 | 105 | 2 | 1 | 385 | 1 | 368 | 0.0 | 568 |
| Msa0468890 | AT2G28310.3 | 68.312 | 385 | 105 | 2 | 1 | 385 | 1 | 368 | 0.0 | 568 |
| Msa0468890 | AT1G08040.2 | 70.876 | 388 | 101 | 3 | 1 | 387 | 1 | 377 | 0.0 | 566 |
| Msa0468890 | AT1G08040.4 | 70.876 | 388 | 101 | 3 | 1 | 387 | 1 | 377 | 0.0 | 566 |
| Msa0468890 | AT1G08040.1 | 70.876 | 388 | 101 | 3 | 1 | 387 | 1 | 377 | 0.0 | 566 |
| Msa0468890 | AT1G08040.3 | 70.619 | 388 | 98 | 4 | 1 | 387 | 1 | 373 | 0.0 | 560 |
| Msa0468890 | AT3G26440.5 | 67.539 | 382 | 116 | 3 | 6 | 386 | 33 | 407 | 0.0 | 558 |
| Msa0468890 | AT3G26440.6 | 67.539 | 382 | 116 | 3 | 6 | 386 | 33 | 407 | 0.0 | 558 |
| Msa0468890 | AT3G26440.1 | 67.539 | 382 | 116 | 3 | 6 | 386 | 10 | 384 | 0.0 | 556 |
| Msa0468890 | AT3G26440.2 | 67.539 | 382 | 116 | 3 | 6 | 386 | 10 | 384 | 0.0 | 556 |
| Msa0468890 | AT3G26440.4 | 65.535 | 383 | 98 | 4 | 6 | 386 | 10 | 360 | 0.0 | 529 |
| Msa0468890 | AT3G26440.3 | 67.493 | 363 | 110 | 3 | 6 | 367 | 10 | 365 | 0.0 | 522 |
| Msa0468890 | AT1G24570.2 | 65.684 | 373 | 110 | 4 | 17 | 387 | 19 | 375 | 0.0 | 513 |
| Msa0468890 | AT1G24570.1 | 63.539 | 373 | 111 | 5 | 17 | 387 | 19 | 368 | 1.94e-173 | 489 |
| Msa0468890 | AT1G13000.3 | 66.871 | 326 | 103 | 2 | 6 | 327 | 10 | 334 | 1.53e-168 | 475 |
| Msa0468890 | AT4G12840.2 | 52.045 | 269 | 116 | 8 | 98 | 356 | 76 | 341 | 3.67e-91 | 280 |
| Msa0468890 | AT4G12840.1 | 52.045 | 269 | 116 | 8 | 98 | 356 | 76 | 341 | 5.84e-91 | 280 |
| Msa0468890 | AT1G11170.3 | 48.540 | 274 | 132 | 6 | 102 | 366 | 83 | 356 | 5.25e-84 | 261 |
| Msa0468890 | AT4G12840.3 | 52.000 | 250 | 107 | 8 | 117 | 356 | 1 | 247 | 1.03e-83 | 258 |
| Msa0468890 | AT1G61240.8 | 48.718 | 273 | 131 | 6 | 102 | 365 | 13 | 285 | 1.16e-83 | 259 |
| Msa0468890 | AT1G11170.1 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.31e-83 | 261 |
| Msa0468890 | AT1G11170.6 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.31e-83 | 261 |
| Msa0468890 | AT1G11170.5 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.31e-83 | 261 |
| Msa0468890 | AT1G11170.7 | 48.582 | 282 | 133 | 7 | 104 | 376 | 85 | 363 | 3.31e-83 | 261 |
| Msa0468890 | AT1G11170.4 | 50.588 | 255 | 117 | 6 | 102 | 347 | 83 | 337 | 5.48e-83 | 257 |
| Msa0468890 | AT1G11170.8 | 50.588 | 255 | 117 | 6 | 102 | 347 | 83 | 337 | 5.48e-83 | 257 |
| Msa0468890 | AT1G61240.4 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.69e-83 | 259 |
| Msa0468890 | AT1G61240.5 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.69e-83 | 259 |
| Msa0468890 | AT1G61240.6 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.69e-83 | 259 |
| Msa0468890 | AT1G61240.2 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.69e-83 | 259 |
| Msa0468890 | AT1G61240.1 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.69e-83 | 259 |
| Msa0468890 | AT1G61240.3 | 48.718 | 273 | 131 | 6 | 102 | 365 | 80 | 352 | 8.69e-83 | 259 |
| Msa0468890 | AT1G61240.7 | 48.889 | 270 | 129 | 6 | 102 | 362 | 80 | 349 | 1.58e-82 | 257 |
| Msa0468890 | AT4G18530.1 | 47.170 | 265 | 122 | 7 | 96 | 347 | 69 | 328 | 1.29e-80 | 253 |
| Msa0468890 | AT4G18530.3 | 47.170 | 265 | 122 | 7 | 96 | 347 | 64 | 323 | 1.48e-80 | 252 |
| Msa0468890 | AT1G11170.2 | 51.082 | 231 | 105 | 5 | 102 | 324 | 83 | 313 | 2.27e-74 | 235 |
| Msa0468890 | AT4G18530.2 | 46.473 | 241 | 112 | 6 | 96 | 324 | 69 | 304 | 5.83e-72 | 228 |
| Msa0468890 | AT2G25905.1 | 48.485 | 231 | 96 | 5 | 17 | 246 | 19 | 227 | 2.75e-64 | 205 |
| Msa0468890 | AT1G11170.9 | 51.786 | 168 | 76 | 3 | 104 | 266 | 85 | 252 | 5.67e-52 | 174 |
Find 143 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATGACTATATATTTATA+TGG | 0.213074 | 3_3:-70579038 | Msa0468890:CDS |
| TTGCCATGTCAACCCTTTAT+TGG | 0.257735 | 3_3:+70578837 | None:intergenic |
| ACGCTGCACAAGGAGGTAAA+TGG | 0.258388 | 3_3:+70578645 | None:intergenic |
| CCCCTGCCATGGTGCTTTCC+CGG | 0.260665 | 3_3:+70577959 | None:intergenic |
| CAGGGAAGTTCCGAAATAAA+TGG | 0.282809 | 3_3:-70580444 | Msa0468890:exon |
| TCTGCTCCTCTTGGATTTGA+TGG | 0.289728 | 3_3:+70579724 | None:intergenic |
| TGCCATGTCAACCCTTTATT+GGG | 0.303558 | 3_3:+70578838 | None:intergenic |
| AAGCATATTTGTTTCTTATA+CGG | 0.306033 | 3_3:-70580532 | Msa0468890:five_prime_UTR |
| CCTGGTTTAGAACCCAATAA+AGG | 0.308435 | 3_3:-70578850 | Msa0468890:CDS |
| TTGTGTCTGGCATATGATTC+AGG | 0.313499 | 3_3:-70578489 | Msa0468890:intron |
| TTACAGTAGAGGTTGCTTAT+TGG | 0.317301 | 3_3:-70577453 | Msa0468890:three_prime_UTR |
| ATGCAGGTTTGTTGAGATTA+TGG | 0.320597 | 3_3:-70578540 | Msa0468890:intron |
| GTTGTGTTGTGTTGTGAGTT+TGG | 0.330989 | 3_3:+70581588 | None:intergenic |
| TTCTACATTGGATTTAAGTT+TGG | 0.340726 | 3_3:+70577538 | None:intergenic |
| GTAACGGTCCCCATTTATTT+CGG | 0.349465 | 3_3:+70580434 | None:intergenic |
| GGCAGGTGAGGGAGAGATGT+AGG | 0.349851 | 3_3:-70577784 | Msa0468890:intron |
| CGCTGCACAAGGAGGTAAAT+GGG | 0.354183 | 3_3:+70578646 | None:intergenic |
| TATTGATGCAGCCGTGAAAA+AGG | 0.363474 | 3_3:-70579456 | Msa0468890:intron |
| ATCCTTCTATTTCATTATGA+TGG | 0.372976 | 3_3:-70579332 | Msa0468890:CDS |
| TTGCAGGGTAAAACTGAAAC+CGG | 0.384720 | 3_3:-70577978 | Msa0468890:intron |
| GGTAAACTTTCTGCTCCTCT+TGG | 0.388659 | 3_3:+70579715 | None:intergenic |
| GGCCATCATAATGAAATAGA+AGG | 0.390690 | 3_3:+70579330 | None:intergenic |
| GAGAAGCATGGCGTTGTGTC+TGG | 0.390721 | 3_3:-70578502 | Msa0468890:CDS |
| CATGCTTCTCGCGAGAATAC+TGG | 0.396635 | 3_3:+70578515 | None:intergenic |
| CAAGTGCAGGTACTTAAAAC+TGG | 0.397978 | 3_3:-70578902 | Msa0468890:intron |
| GTGCTCGCAAACAGACTAAA+TGG | 0.402665 | 3_3:-70579256 | Msa0468890:intron |
| CATTTATTTCGGAACTTCCC+TGG | 0.403522 | 3_3:+70580445 | None:intergenic |
| AATAAGCCTCATAATTTCAC+TGG | 0.409734 | 3_3:+70580271 | None:intergenic |
| TTGCAGTTCAATCTCCCATC+TGG | 0.411688 | 3_3:-70580062 | Msa0468890:intron |
| GTGTCATTTGATAAGTGATT+TGG | 0.412581 | 3_3:+70579945 | None:intergenic |
| TAGAGTGACGGAGGAGAAAC+CGG | 0.412831 | 3_3:-70578684 | Msa0468890:CDS |
| AACCGGGAAAGCACCATGGC+AGG | 0.417235 | 3_3:-70577961 | Msa0468890:CDS |
| TGTTCCCACACTAGGAAATC+AGG | 0.418886 | 3_3:-70578095 | Msa0468890:intron |
| TTTATTGGATGCAGTCCTAA+TGG | 0.423254 | 3_3:-70580302 | Msa0468890:intron |
| TTCCTCCGACACCCCTCAGC+CGG | 0.423841 | 3_3:-70581465 | Msa0468890:five_prime_UTR |
| AGGGAAGTTCCGAAATAAAT+GGG | 0.425120 | 3_3:-70580443 | Msa0468890:exon |
| CAGAAGAATGGAACCTTCAC+TGG | 0.430195 | 3_3:+70581526 | None:intergenic |
| GGAGGTGAGTCTACGCATAA+TGG | 0.439183 | 3_3:+70577624 | None:intergenic |
| CTGGTTTAGAACCCAATAAA+GGG | 0.442489 | 3_3:-70578849 | Msa0468890:CDS |
| ATTTATATGGGATGAAGACT+TGG | 0.443996 | 3_3:-70579025 | Msa0468890:CDS |
| TACATTGAAGAAAGATATAC+AGG | 0.451027 | 3_3:-70580014 | Msa0468890:CDS |
| TTTAAGTTTGGTCCCTAGCT+AGG | 0.457624 | 3_3:+70577550 | None:intergenic |
| GCTTGACTTGTACACAGTTA+TGG | 0.462096 | 3_3:-70577650 | Msa0468890:three_prime_UTR |
| CATATAAATATATAGTCATA+TGG | 0.467190 | 3_3:+70579039 | None:intergenic |
| TCATATGGTGCCACAATGTC+AGG | 0.467804 | 3_3:+70579054 | None:intergenic |
| TTCACCATTCATCAACTAGA+AGG | 0.471634 | 3_3:+70580503 | None:intergenic |
| CTTGGCATTGCAGAATGACT+TGG | 0.475324 | 3_3:-70578374 | Msa0468890:intron |
| TTGGAGTTGTCGATGCTCAA+TGG | 0.480149 | 3_3:-70578132 | Msa0468890:CDS |
| TAGCCTGCACATGAGAAGAT+TGG | 0.483409 | 3_3:-70578151 | Msa0468890:CDS |
| GTGAAGGTCACAAGGTACTT+TGG | 0.484389 | 3_3:+70579503 | None:intergenic |
| ACCGGGAAAGCACCATGGCA+GGG | 0.486609 | 3_3:-70577960 | Msa0468890:CDS |
| GAAAACCCAGTGAAATTATG+AGG | 0.490987 | 3_3:-70580277 | Msa0468890:CDS |
| CCGGGAAAGCACCATGGCAG+GGG | 0.491082 | 3_3:-70577959 | Msa0468890:CDS |
| ACTGGTGAAGAAGCATGGCC+TGG | 0.491574 | 3_3:-70578884 | Msa0468890:CDS |
| CGACTCAGCTTCAACAATGC+CGG | 0.491664 | 3_3:+70579690 | None:intergenic |
| GGCCTGGAGATTTCACAGCC+TGG | 0.496813 | 3_3:-70578868 | Msa0468890:CDS |
| ATGATGGCCGAGCTAATGAA+TGG | 0.499945 | 3_3:-70579316 | Msa0468890:CDS |
| CCTTTATTGGGTTCTAAACC+AGG | 0.501314 | 3_3:+70578850 | None:intergenic |
| TGAAGGTTCCATTCTTCTGC+CGG | 0.503865 | 3_3:-70581522 | Msa0468890:five_prime_UTR |
| GATATACAGGCCGTCGTGCT+TGG | 0.507431 | 3_3:-70580001 | Msa0468890:CDS |
| GACTCAGCTTCAACAATGCC+GGG | 0.509378 | 3_3:+70579691 | None:intergenic |
| GGTGAGGGAGAGATGTAGGA+AGG | 0.509559 | 3_3:-70577780 | Msa0468890:CDS |
| TCTTAAGATACACACCTCAC+TGG | 0.511552 | 3_3:+70579636 | None:intergenic |
| GAACATGCATATTTCAAGTC+CGG | 0.512196 | 3_3:-70577722 | Msa0468890:CDS |
| AAGAACAAGTGACACATCTC+AGG | 0.513368 | 3_3:+70577422 | None:intergenic |
| ACTCCAATCTTCTCATGTGC+AGG | 0.516783 | 3_3:+70578148 | None:intergenic |
| ATATGACTATATATTTATAT+GGG | 0.518689 | 3_3:-70579037 | Msa0468890:CDS |
| CATGAAATAGAGTCCTAGCT+AGG | 0.518879 | 3_3:-70577563 | Msa0468890:three_prime_UTR |
| CGGCATTGTTGAAGCTGAGT+CGG | 0.519485 | 3_3:-70579689 | Msa0468890:CDS |
| AATGACTTGGTCCATGGATG+GGG | 0.521935 | 3_3:-70578361 | Msa0468890:CDS |
| TGTCGGAGGAACGTGGAAGA+AGG | 0.523573 | 3_3:+70581477 | None:intergenic |
| TCCTCCGACACCCCTCAGCC+GGG | 0.526490 | 3_3:-70581464 | Msa0468890:five_prime_UTR |
| TTTACCTGATTTCCTAGTGT+GGG | 0.526887 | 3_3:+70578091 | None:intergenic |
| AAAGCCCGGCTGAGGGGTGT+CGG | 0.531570 | 3_3:+70581460 | None:intergenic |
| AACCAGGCTGTGAAATCTCC+AGG | 0.532638 | 3_3:+70578866 | None:intergenic |
| CTTAAGATACACACCTCACT+GGG | 0.536039 | 3_3:+70579637 | None:intergenic |
| GATACCTTCTAGTTGATGAA+TGG | 0.538994 | 3_3:-70580507 | Msa0468890:five_prime_UTR |
| TCCAACATTGTCATTAACAA+AGG | 0.539794 | 3_3:-70580198 | Msa0468890:intron |
| CAAAATCAAGTCCCCATCCA+TGG | 0.541003 | 3_3:+70578350 | None:intergenic |
| TCAGCTCTCAAGTTCTACAT+TGG | 0.542981 | 3_3:+70577526 | None:intergenic |
| GCATATTTCAAGTCCGGCGG+TGG | 0.544222 | 3_3:-70577716 | Msa0468890:CDS |
| ATTTACCTGATTTCCTAGTG+TGG | 0.551215 | 3_3:+70578090 | None:intergenic |
| GGGAGAGATGTAGGAAGGAG+TGG | 0.553738 | 3_3:-70577775 | Msa0468890:CDS |
| ACCTTTGTTAATGACAATGT+TGG | 0.557482 | 3_3:+70580197 | None:intergenic |
| GAATGACTTGGTCCATGGAT+GGG | 0.558080 | 3_3:-70578362 | Msa0468890:CDS |
| TTGCAGAATGACTTGGTCCA+TGG | 0.561994 | 3_3:-70578367 | Msa0468890:intron |
| GCCCGGCTGAGGGGTGTCGG+AGG | 0.562715 | 3_3:+70581463 | None:intergenic |
| TCGAGGGAAGCAAGCCAGAT+GGG | 0.567592 | 3_3:+70580048 | None:intergenic |
| AAATGGGGACCGTTACTCGC+AGG | 0.570066 | 3_3:-70580427 | Msa0468890:intron |
| TGTCTCATAAATTACAGTAG+AGG | 0.570186 | 3_3:-70577464 | Msa0468890:three_prime_UTR |
| CACCAAGGTGTTCCCACACT+AGG | 0.571590 | 3_3:-70578103 | Msa0468890:CDS |
| TGAGTTTGAATGGTCAAAGA+AGG | 0.573343 | 3_3:-70579291 | Msa0468890:CDS |
| CAGTATTCTCGCGAGAAGCA+TGG | 0.573602 | 3_3:-70578514 | Msa0468890:CDS |
| AGAATGACTTGGTCCATGGA+TGG | 0.574042 | 3_3:-70578363 | Msa0468890:CDS |
| TACCTTGTGACCTTCACTGT+TGG | 0.581078 | 3_3:-70579497 | Msa0468890:CDS |
| ACTCATCCCATTCATTAGCT+CGG | 0.581632 | 3_3:+70579309 | None:intergenic |
| ATGAATGGGATGAGTTTGAA+TGG | 0.582732 | 3_3:-70579301 | Msa0468890:CDS |
| CATTTCATAGCCAACAGTGA+AGG | 0.584725 | 3_3:+70579487 | None:intergenic |
| ATCGAGGGAAGCAAGCCAGA+TGG | 0.584820 | 3_3:+70580047 | None:intergenic |
| TTTATATGGGATGAAGACTT+GGG | 0.588977 | 3_3:-70579024 | Msa0468890:CDS |
| ATAAGCCTCATAATTTCACT+GGG | 0.590143 | 3_3:+70580272 | None:intergenic |
| AGAGTGACGGAGGAGAAACC+GGG | 0.592731 | 3_3:-70578683 | Msa0468890:CDS |
| TGTGTTGTGAGTTTGGAACA+AGG | 0.593068 | 3_3:+70581595 | None:intergenic |
| ATTATCAGACCTGCGAGTAA+CGG | 0.593281 | 3_3:+70580418 | None:intergenic |
| GGAGCAGAAAGTTTACCTCC+CGG | 0.596329 | 3_3:-70579709 | Msa0468890:CDS |
| CGCTAACCGACTCTGAAACA+TGG | 0.596779 | 3_3:+70577751 | None:intergenic |
| TTGTGAGTTTGGAACAAGGA+GGG | 0.598179 | 3_3:+70581599 | None:intergenic |
| TTAAAACTGGTGAAGAAGCA+TGG | 0.599811 | 3_3:-70578889 | Msa0468890:CDS |
| ATGAAATAGAGTCCTAGCTA+GGG | 0.599839 | 3_3:-70577562 | Msa0468890:three_prime_UTR |
| TGAGGGGTGTCGGAGGAACG+TGG | 0.601037 | 3_3:+70581470 | None:intergenic |
| AGCCAACAGTGAAGGTCACA+AGG | 0.602730 | 3_3:+70579495 | None:intergenic |
| CGGGAAAGCACCATGGCAGG+GGG | 0.604779 | 3_3:-70577958 | Msa0468890:intron |
| AGTGGACCATGTTTCAGAGT+CGG | 0.607117 | 3_3:-70577757 | Msa0468890:CDS |
| TGCTGTTAGAAGATGTGTTG+AGG | 0.607664 | 3_3:-70578329 | Msa0468890:intron |
| CTTATCAAATGACACATCAA+AGG | 0.609949 | 3_3:-70579937 | Msa0468890:intron |
| GAGTTTGGAACAAGGAGGGA+GGG | 0.611388 | 3_3:+70581603 | None:intergenic |
| AACCCAATAAAGGGTTGACA+TGG | 0.618140 | 3_3:-70578840 | Msa0468890:CDS |
| GCTTCCTATAAAACCAGTGA+AGG | 0.619411 | 3_3:-70581539 | Msa0468890:five_prime_UTR |
| ATTTCTGCATCCTGACATTG+TGG | 0.619915 | 3_3:-70579064 | Msa0468890:CDS |
| TGATGGCCGAGCTAATGAAT+GGG | 0.623524 | 3_3:-70579315 | Msa0468890:CDS |
| TGAGTTTGGAACAAGGAGGG+AGG | 0.624086 | 3_3:+70581602 | None:intergenic |
| GCTGCACAAGGAGGTAAATG+GGG | 0.631284 | 3_3:+70578647 | None:intergenic |
| GCAGTTACTTACGCTGCACA+AGG | 0.640937 | 3_3:+70578635 | None:intergenic |
| TTAGACATTAATACCACCGC+CGG | 0.641491 | 3_3:+70577703 | None:intergenic |
| AATGTAAGAGAGATCAATCG+AGG | 0.643208 | 3_3:+70580031 | None:intergenic |
| ACGTGGAAGAAGGTGAAGAA+CGG | 0.648166 | 3_3:+70581487 | None:intergenic |
| CTGAAACCGGGAAAGCACCA+TGG | 0.651275 | 3_3:-70577965 | Msa0468890:CDS |
| TGCAGGGTAAAACTGAAACC+GGG | 0.654503 | 3_3:-70577977 | Msa0468890:intron |
| GTATTAATGTCTAATTCCAG+TGG | 0.654944 | 3_3:-70577694 | Msa0468890:exon |
| TTCCTAGTGTGGGAACACCT+TGG | 0.656990 | 3_3:+70578101 | None:intergenic |
| ATGTAAGAGAGATCAATCGA+GGG | 0.669290 | 3_3:+70580032 | None:intergenic |
| CATGCATATTTCAAGTCCGG+CGG | 0.674373 | 3_3:-70577719 | Msa0468890:CDS |
| AAAAGAAAAGCCCGGCTGAG+GGG | 0.674726 | 3_3:+70581454 | None:intergenic |
| GGGAAGTTCCGAAATAAATG+GGG | 0.684311 | 3_3:-70580442 | Msa0468890:exon |
| TGACGGAGGAGAAACCGGGA+TGG | 0.686924 | 3_3:-70578679 | Msa0468890:CDS |
| CTGCACAAGGAGGTAAATGG+GGG | 0.692874 | 3_3:+70578648 | None:intergenic |
| ATTGTGGGGCAAACCCAGTG+AGG | 0.712457 | 3_3:-70579650 | Msa0468890:intron |
| TGGGTTCCATCAAATCCAAG+AGG | 0.719624 | 3_3:-70579730 | Msa0468890:CDS |
| GCTCAATGGATTGTTCACCA+AGG | 0.733701 | 3_3:-70578118 | Msa0468890:CDS |
| GTTACTTACGCTGCACAAGG+AGG | 0.742418 | 3_3:+70578638 | None:intergenic |
| TTATAAAAGACCAAGCACGA+CGG | 0.744122 | 3_3:+70579991 | None:intergenic |
| TCAGCTTCAACAATGCCGGG+AGG | 0.767152 | 3_3:+70579694 | None:intergenic |
| GTTGTGAGTTTGGAACAAGG+AGG | 0.767505 | 3_3:+70581598 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTGTTTTATATAATACT+GGG | - | chr3_3:70579195-70579214 | Msa0468890:intron | 10.0% |
| !! | ATATGACTATATATTTATAT+GGG | - | chr3_3:70579980-70579999 | Msa0468890:CDS | 10.0% |
| !!! | ATCTTTAATGTTTTTTTTTT+TGG | - | chr3_3:70580064-70580083 | Msa0468890:intron | 10.0% |
| !!! | TCTTTAATGTTTTTTTTTTT+GGG | - | chr3_3:70580065-70580084 | Msa0468890:intron | 10.0% |
| !! | TAAGAATATATTTCAAAAAA+GGG | + | chr3_3:70581420-70581439 | None:intergenic | 10.0% |
| !! | ATAAGAATATATTTCAAAAA+AGG | + | chr3_3:70581421-70581440 | None:intergenic | 10.0% |
| !! | ATAAATTTATTCAAAGTTGA+AGG | + | chr3_3:70577702-70577721 | None:intergenic | 15.0% |
| !!! | AGTTAATGATAATCTATTTT+TGG | + | chr3_3:70577848-70577867 | None:intergenic | 15.0% |
| !!! | TTTTAGTTGTTTTTTGTTAT+TGG | - | chr3_3:70578899-70578918 | Msa0468890:intron | 15.0% |
| !!! | GATATTGTTTTATATAATAC+TGG | - | chr3_3:70579194-70579213 | Msa0468890:intron | 15.0% |
| !! | AATATGATAACAATCAATTA+TGG | + | chr3_3:70579892-70579911 | None:intergenic | 15.0% |
| !! | CATATAAATATATAGTCATA+TGG | + | chr3_3:70579981-70580000 | None:intergenic | 15.0% |
| !! | CATATGACTATATATTTATA+TGG | - | chr3_3:70579979-70579998 | Msa0468890:CDS | 15.0% |
| !! | AGTTTGATATACAATAATAA+GGG | + | chr3_3:70580958-70580977 | None:intergenic | 15.0% |
| !! | AAGTTTGATATACAATAATA+AGG | + | chr3_3:70580959-70580978 | None:intergenic | 15.0% |
| !! | AAGAATATATTTCAAAAAAG+GGG | + | chr3_3:70581419-70581438 | None:intergenic | 15.0% |
| !! | ATCTATCAATAATAACTTGA+AGG | + | chr3_3:70577728-70577747 | None:intergenic | 20.0% |
| !!! | AATATGAATCTTTTCTTTGA+TGG | - | chr3_3:70577904-70577923 | Msa0468890:intron | 20.0% |
| !!! | ATTCTCATATTAAGGATTTT+AGG | - | chr3_3:70578303-70578322 | Msa0468890:intron | 20.0% |
| !! | AATAATTATCCCTTATTCTT+AGG | - | chr3_3:70578377-70578396 | Msa0468890:intron | 20.0% |
| !!! | AAGCATATTTGTTTCTTATA+CGG | - | chr3_3:70578485-70578504 | Msa0468890:intron | 20.0% |
| !!! | GTGTGACAAATTTTTTTTAT+TGG | - | chr3_3:70578700-70578719 | Msa0468890:intron | 20.0% |
| !! | TCATTGATACATAATTGATA+TGG | - | chr3_3:70579159-70579178 | Msa0468890:intron | 20.0% |
| !! | CATTGATACATAATTGATAT+GGG | - | chr3_3:70579160-70579179 | Msa0468890:intron | 20.0% |
| !! | TTTATATAATACTGGGAAAA+TGG | - | chr3_3:70579202-70579221 | Msa0468890:intron | 20.0% |
| !! | ATGTAATTTATAGCCATATT+AGG | + | chr3_3:70579418-70579437 | None:intergenic | 20.0% |
| !! | TCATTAAACAACTAATTAGT+GGG | + | chr3_3:70580587-70580606 | None:intergenic | 20.0% |
| !! | ATCATTAAACAACTAATTAG+TGG | + | chr3_3:70580588-70580607 | None:intergenic | 20.0% |
| !! | AATTACAATTGTATAACTCT+TGG | - | chr3_3:70580625-70580644 | Msa0468890:intron | 20.0% |
| !! | GTTTGATATACAATAATAAG+GGG | + | chr3_3:70580957-70580976 | None:intergenic | 20.0% |
| !!! | AAATTTTCCTTTTATTTGCA+GGG | - | chr3_3:70581024-70581043 | Msa0468890:intron | 20.0% |
| !! | AGAATATATTTCAAAAAAGG+GGG | + | chr3_3:70581418-70581437 | None:intergenic | 20.0% |
| ! | TATGATAATTGGTACAATTG+TGG | - | chr3_3:70577797-70577816 | Msa0468890:intron | 25.0% |
| ! | TTGCTTCAACTTATTTATGA+AGG | + | chr3_3:70578268-70578287 | None:intergenic | 25.0% |
| !!! | TAAGGATTTTAGGTGATATT+AGG | - | chr3_3:70578313-70578332 | Msa0468890:intron | 25.0% |
| ! | AAAAAAAATTTGTCACACAG+TGG | + | chr3_3:70578698-70578717 | None:intergenic | 25.0% |
| !! | CTTATTGTGACAACTTTTAT+TGG | - | chr3_3:70578763-70578782 | Msa0468890:intron | 25.0% |
| !! | ACTTTTATTGGAGTAGTTTT+TGG | - | chr3_3:70578775-70578794 | Msa0468890:intron | 25.0% |
| ! | TACATTGAAGAAAGATATAC+AGG | - | chr3_3:70579003-70579022 | Msa0468890:CDS | 25.0% |
| ! | TGTAGAGAAACAACAAAATA+AGG | + | chr3_3:70579263-70579282 | None:intergenic | 25.0% |
| ! | TGTATCTTAAGACAGTTTAT+AGG | - | chr3_3:70579392-70579411 | Msa0468890:intron | 25.0% |
| !!! | TTAACTAAGTTGACATTTTC+AGG | - | chr3_3:70579477-70579496 | Msa0468890:CDS | 25.0% |
| ! | ATCCTTCTATTTCATTATGA+TGG | - | chr3_3:70579685-70579704 | Msa0468890:CDS | 25.0% |
| !!! | ATAGCAACTCACTTTTAATT+AGG | + | chr3_3:70579868-70579887 | None:intergenic | 25.0% |
| !!! | TGTATTAGTCTTGTATTATC+TGG | - | chr3_3:70580413-70580432 | Msa0468890:intron | 25.0% |
| !!! | TTAGTGGGAATCTTTTAAAA+CGG | + | chr3_3:70580572-70580591 | None:intergenic | 25.0% |
| !!! | CAAATTTTCCTTTTATTTGC+AGG | - | chr3_3:70581023-70581042 | Msa0468890:intron | 25.0% |
| !! | TTTTTACTTGATATGTGACT+TGG | - | chr3_3:70581095-70581114 | Msa0468890:intron | 25.0% |
| ! | GTTTAATATACTTCGAATGT+TGG | + | chr3_3:70581135-70581154 | None:intergenic | 25.0% |
| ! | GAATATATTTCAAAAAAGGG+GGG | + | chr3_3:70581417-70581436 | None:intergenic | 25.0% |
| !! | TTCTACATTGGATTTAAGTT+TGG | + | chr3_3:70581482-70581501 | None:intergenic | 25.0% |
| !!! | TGTTGTTGAGTTTGGTTTTT+AGG | + | chr3_3:70577382-70577401 | None:intergenic | 30.0% |
| !!! | CTTAGCCTTTTGAGTTAATT+TGG | - | chr3_3:70578021-70578040 | Msa0468890:intron | 30.0% |
| ACCTACCAAATTAACTCAAA+AGG | + | chr3_3:70578029-70578048 | None:intergenic | 30.0% | |
| GCATAAGACAAATGACAATT+AGG | + | chr3_3:70578180-70578199 | None:intergenic | 30.0% | |
| ! | AATTGTCATTTGTCTTATGC+TGG | - | chr3_3:70578180-70578199 | Msa0468890:intron | 30.0% |
| TGTCTGTCATTCTCATATTA+AGG | - | chr3_3:70578295-70578314 | Msa0468890:intron | 30.0% | |
| GAGCAAAGAATTATATCGTT+TGG | + | chr3_3:70578351-70578370 | None:intergenic | 30.0% | |
| GTTCAAACTCCTAAGAATAA+GGG | + | chr3_3:70578389-70578408 | None:intergenic | 30.0% | |
| TTAGGAGTTTGAACCATTAT+CGG | - | chr3_3:70578395-70578414 | Msa0468890:intron | 30.0% | |
| TAATAAACCAAACCCGATAA+TGG | + | chr3_3:70578411-70578430 | None:intergenic | 30.0% | |
| !!! | TTGTTGTTTTTTTCTTCAGC+AGG | - | chr3_3:70578444-70578463 | Msa0468890:intron | 30.0% |
| !!! | TGTTGTTTTTTTCTTCAGCA+GGG | - | chr3_3:70578445-70578464 | Msa0468890:intron | 30.0% |
| TTGACATAAACTAGCATATG+TGG | + | chr3_3:70578667-70578686 | None:intergenic | 30.0% | |
| ATAAGCCTCATAATTTCACT+GGG | + | chr3_3:70578748-70578767 | None:intergenic | 30.0% | |
| AATAAGCCTCATAATTTCAC+TGG | + | chr3_3:70578749-70578768 | None:intergenic | 30.0% | |
| !!! | GTAGTTTTTGGTTTCTTTCT+AGG | - | chr3_3:70578787-70578806 | Msa0468890:intron | 30.0% |
| TCCAACATTGTCATTAACAA+AGG | - | chr3_3:70578819-70578838 | Msa0468890:CDS | 30.0% | |
| ACCTTTGTTAATGACAATGT+TGG | + | chr3_3:70578823-70578842 | None:intergenic | 30.0% | |
| TAGTTTCTTCTTCCTCTTTA+CGG | - | chr3_3:70578850-70578869 | Msa0468890:CDS | 30.0% | |
| !! | GTGTCATTTGATAAGTGATT+TGG | + | chr3_3:70579075-70579094 | None:intergenic | 30.0% |
| CTTATCAAATGACACATCAA+AGG | - | chr3_3:70579080-70579099 | Msa0468890:CDS | 30.0% | |
| GTATCCTGTCATCATTATTA+AGG | - | chr3_3:70579111-70579130 | Msa0468890:intron | 30.0% | |
| ATGTCCTTAATAATGATGAC+AGG | + | chr3_3:70579118-70579137 | None:intergenic | 30.0% | |
| !! | TTGTTGTTTCTCTACAGATA+TGG | - | chr3_3:70579267-70579286 | Msa0468890:CDS | 30.0% |
| !! | TGTTGTTTCTCTACAGATAT+GGG | - | chr3_3:70579268-70579287 | Msa0468890:CDS | 30.0% |
| AAATCCTCTGTAAACAATGA+AGG | + | chr3_3:70579459-70579478 | None:intergenic | 30.0% | |
| !! | ACTAAGAAAGACCTTTTTCA+CGG | + | chr3_3:70579575-70579594 | None:intergenic | 30.0% |
| !! | ACCAGTGTGTTATTAACTTT+TGG | - | chr3_3:70579790-70579809 | Msa0468890:intron | 30.0% |
| TCCAAAAGTTAATAACACAC+TGG | + | chr3_3:70579794-70579813 | None:intergenic | 30.0% | |
| ! | TGGATGAAAGATTTTCATTG+TGG | - | chr3_3:70579810-70579829 | Msa0468890:intron | 30.0% |
| !! | ATTTGAGATTTTACCCTTCT+AGG | - | chr3_3:70579916-70579935 | Msa0468890:intron | 30.0% |
| ATTTATATGGGATGAAGACT+TGG | - | chr3_3:70579992-70580011 | Msa0468890:CDS | 30.0% | |
| TTTATATGGGATGAAGACTT+GGG | - | chr3_3:70579993-70580012 | Msa0468890:CDS | 30.0% | |
| CATATCAAATACTCACTCTT+CGG | + | chr3_3:70580036-70580055 | None:intergenic | 30.0% | |
| GAAGAGTGAGTATTTGATAT+GGG | - | chr3_3:70580035-70580054 | Msa0468890:CDS | 30.0% | |
| !!! | GCGTTAACTATTGATTTTCT+TGG | - | chr3_3:70580302-70580321 | Msa0468890:intron | 30.0% |
| ! | TTGGATTTTTGTTAGAGTGA+CGG | - | chr3_3:70580321-70580340 | Msa0468890:intron | 30.0% |
| ACAAGACTAATACATTACAC+CGG | + | chr3_3:70580407-70580426 | None:intergenic | 30.0% | |
| !! | TCATTCTTACTTTTACAGCA+TGG | - | chr3_3:70580750-70580769 | Msa0468890:intron | 30.0% |
| !!! | TTTCAGTTTTTTACGTTCTC+CGG | + | chr3_3:70580792-70580811 | None:intergenic | 30.0% |
| ! | AGTTTTACCCTGCAAATAAA+AGG | + | chr3_3:70581034-70581053 | None:intergenic | 30.0% |
| TAATATACTTCGAATGTTGG+AGG | + | chr3_3:70581132-70581151 | None:intergenic | 30.0% | |
| TGATGTTTCAATGTTGTTGA+TGG | - | chr3_3:70581212-70581231 | Msa0468890:intron | 30.0% | |
| GTATTAATGTCTAATTCCAG+TGG | - | chr3_3:70581323-70581342 | Msa0468890:intron | 30.0% | |
| TGTCTCATAAATTACAGTAG+AGG | - | chr3_3:70581553-70581572 | Msa0468890:five_prime_UTR | 30.0% | |
| !!! | GTTGAGTTTGGTTTTTAGGT+GGG | + | chr3_3:70577378-70577397 | None:intergenic | 35.0% |
| !!! | TGTTGAGTTTGGTTTTTAGG+TGG | + | chr3_3:70577379-70577398 | None:intergenic | 35.0% |
| !!! | GCTCTTTTTGTTGTTGAGTT+TGG | + | chr3_3:70577390-70577409 | None:intergenic | 35.0% |
| ! | AGAACGGAAGATGAATTTTC+CGG | + | chr3_3:70577517-70577536 | None:intergenic | 35.0% |
| ! | CAGATCTTCATCTCTTTTTC+TGG | - | chr3_3:70577620-70577639 | Msa0468890:three_prime_UTR | 35.0% |
| !! | ATCTCTTTTTCTGGTACGTT+TGG | - | chr3_3:70577629-70577648 | Msa0468890:three_prime_UTR | 35.0% |
| !!! | ACAATTGTGGCTGTTTTGAT+TGG | - | chr3_3:70577810-70577829 | Msa0468890:intron | 35.0% |
| ! | TGCCACATGCTTTTGTAATT+GGG | - | chr3_3:70577943-70577962 | Msa0468890:intron | 35.0% |
| ! | ATTGGGGAGCTACTAATTTT+AGG | - | chr3_3:70577960-70577979 | Msa0468890:CDS | 35.0% |
| !!! | GCCTTTTGAGTTAATTTGGT+AGG | - | chr3_3:70578025-70578044 | Msa0468890:intron | 35.0% |
| CATCATCTGCTAGCTATATT+TGG | - | chr3_3:70578083-70578102 | Msa0468890:intron | 35.0% | |
| ! | AGCTATATTTGGTTCCTTTG+TGG | - | chr3_3:70578094-70578113 | Msa0468890:intron | 35.0% |
| TTTCCTTGAAGTAACCACAA+AGG | + | chr3_3:70578111-70578130 | None:intergenic | 35.0% | |
| ! | ATGATTAGTTCCTTTGCACA+TGG | - | chr3_3:70578225-70578244 | Msa0468890:intron | 35.0% |
| GGTTCAAACTCCTAAGAATA+AGG | + | chr3_3:70578390-70578409 | None:intergenic | 35.0% | |
| TAGGAGTTTGAACCATTATC+GGG | - | chr3_3:70578396-70578415 | Msa0468890:intron | 35.0% | |
| !!! | GTTGTTTTTTTCTTCAGCAG+GGG | - | chr3_3:70578446-70578465 | Msa0468890:intron | 35.0% |
| !! | GATACCTTCTAGTTGATGAA+TGG | - | chr3_3:70578510-70578529 | Msa0468890:CDS | 35.0% |
| TTCACCATTCATCAACTAGA+AGG | + | chr3_3:70578517-70578536 | None:intergenic | 35.0% | |
| AGGGAAGTTCCGAAATAAAT+GGG | - | chr3_3:70578574-70578593 | Msa0468890:intron | 35.0% | |
| AAAAATTTGTCACACAGTGG+TGG | + | chr3_3:70578695-70578714 | None:intergenic | 35.0% | |
| TTTATTGGATGCAGTCCTAA+TGG | - | chr3_3:70578715-70578734 | Msa0468890:intron | 35.0% | |
| GAAAACCCAGTGAAATTATG+AGG | - | chr3_3:70578740-70578759 | Msa0468890:intron | 35.0% | |
| AATAATCTACTGCAGCACAA+AGG | + | chr3_3:70578880-70578899 | None:intergenic | 35.0% | |
| ATGTAAGAGAGATCAATCGA+GGG | + | chr3_3:70578988-70579007 | None:intergenic | 35.0% | |
| AATGTAAGAGAGATCAATCG+AGG | + | chr3_3:70578989-70579008 | None:intergenic | 35.0% | |
| TTATAAAAGACCAAGCACGA+CGG | + | chr3_3:70579029-70579048 | None:intergenic | 35.0% | |
| ! | ACTTTTACTTGCGTAGATTG+TGG | - | chr3_3:70579351-70579370 | Msa0468890:CDS | 35.0% |
| ! | CTTTTACTTGCGTAGATTGT+GGG | - | chr3_3:70579352-70579371 | Msa0468890:CDS | 35.0% |
| ! | TTTTACTTGCGTAGATTGTG+GGG | - | chr3_3:70579353-70579372 | Msa0468890:CDS | 35.0% |
| GACAGTTTATAGGCCTAATA+TGG | - | chr3_3:70579402-70579421 | Msa0468890:intron | 35.0% | |
| TGTAAACAATGAAGGTCAGA+AGG | + | chr3_3:70579451-70579470 | None:intergenic | 35.0% | |
| GGCCATCATAATGAAATAGA+AGG | + | chr3_3:70579690-70579709 | None:intergenic | 35.0% | |
| ATGAATGGGATGAGTTTGAA+TGG | - | chr3_3:70579716-70579735 | Msa0468890:CDS | 35.0% | |
| TGAGTTTGAATGGTCAAAGA+AGG | - | chr3_3:70579726-70579745 | Msa0468890:CDS | 35.0% | |
| CGAAGAGTGAGTATTTGATA+TGG | - | chr3_3:70580034-70580053 | Msa0468890:CDS | 35.0% | |
| AGTGAGTATTTGATATGGGA+AGG | - | chr3_3:70580039-70580058 | Msa0468890:CDS | 35.0% | |
| TTAAAACTGGTGAAGAAGCA+TGG | - | chr3_3:70580128-70580147 | Msa0468890:intron | 35.0% | |
| ! | CTGGTTTAGAACCCAATAAA+GGG | - | chr3_3:70580168-70580187 | Msa0468890:intron | 35.0% |
| TGGCAAATGACAAAAAGAAG+AGG | - | chr3_3:70580197-70580216 | Msa0468890:intron | 35.0% | |
| TCTTGTATTATCTGGTCTAC+CGG | - | chr3_3:70580421-70580440 | Msa0468890:intron | 35.0% | |
| !! | ATGCAGGTTTGTTGAGATTA+TGG | - | chr3_3:70580477-70580496 | Msa0468890:five_prime_UTR | 35.0% |
| !!! | GGGAATCTTTTAAAACGGTT+AGG | + | chr3_3:70580567-70580586 | None:intergenic | 35.0% |
| TTTACCTGATTTCCTAGTGT+GGG | + | chr3_3:70580929-70580948 | None:intergenic | 35.0% | |
| ATTTACCTGATTTCCTAGTG+TGG | + | chr3_3:70580930-70580949 | None:intergenic | 35.0% | |
| AACTAATCAACAACCTGTGA+AGG | - | chr3_3:70581152-70581171 | Msa0468890:intron | 35.0% | |
| TAAGATAAAGACTCCTTCAC+AGG | + | chr3_3:70581168-70581187 | None:intergenic | 35.0% | |
| ! | GAACATGCATATTTCAAGTC+CGG | - | chr3_3:70581295-70581314 | Msa0468890:intron | 35.0% |
| TATATTTCAAAAAAGGGGGG+AGG | + | chr3_3:70581414-70581433 | None:intergenic | 35.0% | |
| ATGAAATAGAGTCCTAGCTA+GGG | - | chr3_3:70581455-70581474 | Msa0468890:five_prime_UTR | 35.0% | |
| TTACAGTAGAGGTTGCTTAT+TGG | - | chr3_3:70581564-70581583 | Msa0468890:five_prime_UTR | 35.0% | |
| !!! | GTTTGGTTTTTAGGTGGGTT+TGG | + | chr3_3:70577373-70577392 | None:intergenic | 40.0% |
| ! | TTGTGAGTTTGGAACAAGGA+GGG | + | chr3_3:70577421-70577440 | None:intergenic | 40.0% |
| ! | TGTGTTGTGAGTTTGGAACA+AGG | + | chr3_3:70577425-70577444 | None:intergenic | 40.0% |
| GTTGTGTTGTGTTGTGAGTT+TGG | + | chr3_3:70577432-70577451 | None:intergenic | 40.0% | |
| GCTTCCTATAAAACCAGTGA+AGG | - | chr3_3:70577478-70577497 | Msa0468890:three_prime_UTR | 40.0% | |
| !!! | GGAACCTTCACTGGTTTTAT+AGG | + | chr3_3:70577485-70577504 | None:intergenic | 40.0% |
| ! | TGAATTTTCCGGCAGAAGAA+TGG | + | chr3_3:70577506-70577525 | None:intergenic | 40.0% |
| GAGTGAGAAAAAGAAAAGCC+CGG | + | chr3_3:70577574-70577593 | None:intergenic | 40.0% | |
| ! | CTGCCACATGCTTTTGTAAT+TGG | - | chr3_3:70577942-70577961 | Msa0468890:intron | 40.0% |
| ! | GCCACATGCTTTTGTAATTG+GGG | - | chr3_3:70577944-70577963 | Msa0468890:intron | 40.0% |
| ! | TCCCCAATTACAAAAGCATG+TGG | + | chr3_3:70577948-70577967 | None:intergenic | 40.0% |
| ! | ATTGAAGAAAAGTGCAAGCG+TGG | - | chr3_3:70578050-70578069 | Msa0468890:intron | 40.0% |
| GTTCCTTTGTGGTTACTTCA+AGG | - | chr3_3:70578105-70578124 | Msa0468890:CDS | 40.0% | |
| AGTTCCTTTGCACATGGTTA+TGG | - | chr3_3:70578231-70578250 | Msa0468890:intron | 40.0% | |
| CAAACCATAACCATGTGCAA+AGG | + | chr3_3:70578238-70578257 | None:intergenic | 40.0% | |
| GAATTATATCGTTTGGCGTG+TGG | + | chr3_3:70578344-70578363 | None:intergenic | 40.0% | |
| GTTTGAACCATTATCGGGTT+TGG | - | chr3_3:70578401-70578420 | Msa0468890:intron | 40.0% | |
| !! | AGTTTTATGAGCATACAGCC+AGG | - | chr3_3:70578554-70578573 | Msa0468890:intron | 40.0% |
| ! | GTTTTATGAGCATACAGCCA+GGG | - | chr3_3:70578555-70578574 | Msa0468890:intron | 40.0% |
| CATTTATTTCGGAACTTCCC+TGG | + | chr3_3:70578575-70578594 | None:intergenic | 40.0% | |
| CAGGGAAGTTCCGAAATAAA+TGG | - | chr3_3:70578573-70578592 | Msa0468890:intron | 40.0% | |
| GGGAAGTTCCGAAATAAATG+GGG | - | chr3_3:70578575-70578594 | Msa0468890:intron | 40.0% | |
| GTAACGGTCCCCATTTATTT+CGG | + | chr3_3:70578586-70578605 | None:intergenic | 40.0% | |
| ATTATCAGACCTGCGAGTAA+CGG | + | chr3_3:70578602-70578621 | None:intergenic | 40.0% | |
| ! | TCACTGGGTTTTCTACCATT+AGG | + | chr3_3:70578733-70578752 | None:intergenic | 40.0% |
| CTTAAGATACACACCTCACT+GGG | + | chr3_3:70579383-70579402 | None:intergenic | 40.0% | |
| TCTTAAGATACACACCTCAC+TGG | + | chr3_3:70579384-70579403 | None:intergenic | 40.0% | |
| CTGACCTTCATTGTTTACAG+AGG | - | chr3_3:70579452-70579471 | Msa0468890:intron | 40.0% | |
| CATTTCATAGCCAACAGTGA+AGG | + | chr3_3:70579533-70579552 | None:intergenic | 40.0% | |
| TATTGATGCAGCCGTGAAAA+AGG | - | chr3_3:70579561-70579580 | Msa0468890:intron | 40.0% | |
| ACTCATCCCATTCATTAGCT+CGG | + | chr3_3:70579711-70579730 | None:intergenic | 40.0% | |
| ! | TGAGATTTTACCCTTCTAGG+TGG | - | chr3_3:70579919-70579938 | Msa0468890:intron | 40.0% |
| ATTTCTGCATCCTGACATTG+TGG | - | chr3_3:70579953-70579972 | Msa0468890:CDS | 40.0% | |
| CAAGTGCAGGTACTTAAAAC+TGG | - | chr3_3:70580115-70580134 | Msa0468890:intron | 40.0% | |
| !! | CCTTTATTGGGTTCTAAACC+AGG | + | chr3_3:70580170-70580189 | None:intergenic | 40.0% |
| ! | CCTGGTTTAGAACCCAATAA+AGG | - | chr3_3:70580167-70580186 | Msa0468890:intron | 40.0% |
| AACCCAATAAAGGGTTGACA+TGG | - | chr3_3:70580177-70580196 | Msa0468890:intron | 40.0% | |
| TGCCATGTCAACCCTTTATT+GGG | + | chr3_3:70580182-70580201 | None:intergenic | 40.0% | |
| TTGCCATGTCAACCCTTTAT+TGG | + | chr3_3:70580183-70580202 | None:intergenic | 40.0% | |
| GAACCACAAGAAACTGCTAT+GGG | + | chr3_3:70580258-70580277 | None:intergenic | 40.0% | |
| TGAACCACAAGAAACTGCTA+TGG | + | chr3_3:70580259-70580278 | None:intergenic | 40.0% | |
| ! | GATTTTTGTTAGAGTGACGG+AGG | - | chr3_3:70580324-70580343 | Msa0468890:intron | 40.0% |
| CTTGTATTATCTGGTCTACC+GGG | - | chr3_3:70580422-70580441 | Msa0468890:intron | 40.0% | |
| ATGCACAATTAGATACAGCC+CGG | + | chr3_3:70580443-70580462 | None:intergenic | 40.0% | |
| ATTCTCTGTCACATGAATGC+AGG | - | chr3_3:70580461-70580480 | Msa0468890:five_prime_UTR | 40.0% | |
| TTGTGTCTGGCATATGATTC+AGG | - | chr3_3:70580528-70580547 | Msa0468890:five_prime_UTR | 40.0% | |
| !! | GGCATATGATTCAGGTTGAA+TGG | - | chr3_3:70580536-70580555 | Msa0468890:five_prime_UTR | 40.0% |
| TGCTGTTAGAAGATGTGTTG+AGG | - | chr3_3:70580688-70580707 | Msa0468890:intron | 40.0% | |
| CAGGCTATATCAGGAAAAAG+TGG | + | chr3_3:70580853-70580872 | None:intergenic | 40.0% | |
| TTGCAGGGTAAAACTGAAAC+CGG | - | chr3_3:70581039-70581058 | Msa0468890:intron | 40.0% | |
| !! | GTTTCAATGTTGTTGATGGC+AGG | - | chr3_3:70581216-70581235 | Msa0468890:intron | 40.0% |
| TTAGACATTAATACCACCGC+CGG | + | chr3_3:70581317-70581336 | None:intergenic | 40.0% | |
| ! | GTTTTGTCTCTAATGACCAC+TGG | + | chr3_3:70581342-70581361 | None:intergenic | 40.0% |
| !! | GCTTGACTTGTACACAGTTA+TGG | - | chr3_3:70581367-70581386 | Msa0468890:intron | 40.0% |
| CATGAAATAGAGTCCTAGCT+AGG | - | chr3_3:70581454-70581473 | Msa0468890:five_prime_UTR | 40.0% | |
| ! | TTTAAGTTTGGTCCCTAGCT+AGG | + | chr3_3:70581470-70581489 | None:intergenic | 40.0% |
| TCAGCTCTCAAGTTCTACAT+TGG | + | chr3_3:70581494-70581513 | None:intergenic | 40.0% | |
| AAGAACAAGTGACACATCTC+AGG | + | chr3_3:70581598-70581617 | None:intergenic | 40.0% | |
| !!! | TGGTTTTTAGGTGGGTTTGG+AGG | + | chr3_3:70577370-70577389 | None:intergenic | 45.0% |
| ! | GTTGTGAGTTTGGAACAAGG+AGG | + | chr3_3:70577422-70577441 | None:intergenic | 45.0% |
| CAGAAGAATGGAACCTTCAC+TGG | + | chr3_3:70577494-70577513 | None:intergenic | 45.0% | |
| TGAAGGTTCCATTCTTCTGC+CGG | - | chr3_3:70577495-70577514 | Msa0468890:three_prime_UTR | 45.0% | |
| ACGTGGAAGAAGGTGAAGAA+CGG | + | chr3_3:70577533-70577552 | None:intergenic | 45.0% | |
| AAAAAGAAAAGCCCGGCTGA+GGG | + | chr3_3:70577567-70577586 | None:intergenic | 45.0% | |
| ! | GCAGCTTGCACTTTTAGCAT+TGG | + | chr3_3:70578927-70578946 | None:intergenic | 45.0% |
| TTGCAGTTCAATCTCCCATC+TGG | - | chr3_3:70578955-70578974 | Msa0468890:intron | 45.0% | |
| TGGGTTCCATCAAATCCAAG+AGG | - | chr3_3:70579287-70579306 | Msa0468890:CDS | 45.0% | |
| TCTGCTCCTCTTGGATTTGA+TGG | + | chr3_3:70579296-70579315 | None:intergenic | 45.0% | |
| GGTAAACTTTCTGCTCCTCT+TGG | + | chr3_3:70579305-70579324 | None:intergenic | 45.0% | |
| ! | GTGAAGGTCACAAGGTACTT+TGG | + | chr3_3:70579517-70579536 | None:intergenic | 45.0% |
| TACCTTGTGACCTTCACTGT+TGG | - | chr3_3:70579520-70579539 | Msa0468890:CDS | 45.0% | |
| ATGATGGCCGAGCTAATGAA+TGG | - | chr3_3:70579701-70579720 | Msa0468890:CDS | 45.0% | |
| TGATGGCCGAGCTAATGAAT+GGG | - | chr3_3:70579702-70579721 | Msa0468890:CDS | 45.0% | |
| GTGCTCGCAAACAGACTAAA+TGG | - | chr3_3:70579761-70579780 | Msa0468890:intron | 45.0% | |
| GCTTAGCATACCACCTAGAA+GGG | + | chr3_3:70579932-70579951 | None:intergenic | 45.0% | |
| !! | TCATATGGTGCCACAATGTC+AGG | + | chr3_3:70579966-70579985 | None:intergenic | 45.0% |
| ! | ACCTCTGTCATTTCAAGTGC+AGG | - | chr3_3:70580102-70580121 | Msa0468890:intron | 45.0% |
| ACCTGCACTTGAAATGACAG+AGG | + | chr3_3:70580106-70580125 | None:intergenic | 45.0% | |
| AGTCCCATAGCAGTTTCTTG+TGG | - | chr3_3:70580252-70580271 | Msa0468890:CDS | 45.0% | |
| CTTGGCATTGCAGAATGACT+TGG | - | chr3_3:70580643-70580662 | Msa0468890:intron | 45.0% | |
| !! | TTGCAGAATGACTTGGTCCA+TGG | - | chr3_3:70580650-70580669 | Msa0468890:intron | 45.0% |
| !! | AGAATGACTTGGTCCATGGA+TGG | - | chr3_3:70580654-70580673 | Msa0468890:intron | 45.0% |
| !! | GAATGACTTGGTCCATGGAT+GGG | - | chr3_3:70580655-70580674 | Msa0468890:intron | 45.0% |
| !! | AATGACTTGGTCCATGGATG+GGG | - | chr3_3:70580656-70580675 | Msa0468890:intron | 45.0% |
| CAAAATCAAGTCCCCATCCA+TGG | + | chr3_3:70580670-70580689 | None:intergenic | 45.0% | |
| TCTCATGTGCAGGCTATATC+AGG | + | chr3_3:70580862-70580881 | None:intergenic | 45.0% | |
| TAGCCTGCACATGAGAAGAT+TGG | - | chr3_3:70580866-70580885 | Msa0468890:intron | 45.0% | |
| ACTCCAATCTTCTCATGTGC+AGG | + | chr3_3:70580872-70580891 | None:intergenic | 45.0% | |
| TTGGAGTTGTCGATGCTCAA+TGG | - | chr3_3:70580885-70580904 | Msa0468890:intron | 45.0% | |
| !! | GCTCAATGGATTGTTCACCA+AGG | - | chr3_3:70580899-70580918 | Msa0468890:intron | 45.0% |
| TGTTCCCACACTAGGAAATC+AGG | - | chr3_3:70580922-70580941 | Msa0468890:intron | 45.0% | |
| TGCAGGGTAAAACTGAAACC+GGG | - | chr3_3:70581040-70581059 | Msa0468890:intron | 45.0% | |
| !! | AATGTTGTTGATGGCAGGTG+AGG | - | chr3_3:70581221-70581240 | Msa0468890:intron | 45.0% |
| !! | ATGTTGTTGATGGCAGGTGA+GGG | - | chr3_3:70581222-70581241 | Msa0468890:intron | 45.0% |
| AGTGGACCATGTTTCAGAGT+CGG | - | chr3_3:70581260-70581279 | Msa0468890:intron | 45.0% | |
| ! | CATGCATATTTCAAGTCCGG+CGG | - | chr3_3:70581298-70581317 | Msa0468890:intron | 45.0% |
| !!! | TTTTTTTTTTTTATGATAAT+TGG | - | chr3_3:70577786-70577805 | Msa0468890:intron | 5.0% |
| ! | GAGTTTGGAACAAGGAGGGA+GGG | + | chr3_3:70577417-70577436 | None:intergenic | 50.0% |
| ! | TGAGTTTGGAACAAGGAGGG+AGG | + | chr3_3:70577418-70577437 | None:intergenic | 50.0% |
| AAAAGAAAAGCCCGGCTGAG+GGG | + | chr3_3:70577566-70577585 | None:intergenic | 50.0% | |
| GAAAAAGAAAAGCCCGGCTG+AGG | + | chr3_3:70577568-70577587 | None:intergenic | 50.0% | |
| TTATAGACCGCGCCTTCTAG+AGG | - | chr3_3:70578142-70578161 | Msa0468890:CDS | 50.0% | |
| !! | AAAGTGAGAGCGCCTCTAGA+AGG | + | chr3_3:70578157-70578176 | None:intergenic | 50.0% |
| ! | CACAAAGGTACGCCGTAAAG+AGG | + | chr3_3:70578865-70578884 | None:intergenic | 50.0% |
| GGAGCAGAAAGTTTACCTCC+CGG | - | chr3_3:70579308-70579327 | Msa0468890:CDS | 50.0% | |
| GACTCAGCTTCAACAATGCC+GGG | + | chr3_3:70579329-70579348 | None:intergenic | 50.0% | |
| CGACTCAGCTTCAACAATGC+CGG | + | chr3_3:70579330-70579349 | None:intergenic | 50.0% | |
| CGGCATTGTTGAAGCTGAGT+CGG | - | chr3_3:70579328-70579347 | Msa0468890:CDS | 50.0% | |
| AGCCAACAGTGAAGGTCACA+AGG | + | chr3_3:70579525-70579544 | None:intergenic | 50.0% | |
| CGCTTAGCATACCACCTAGA+AGG | + | chr3_3:70579933-70579952 | None:intergenic | 50.0% | |
| AACCAGGCTGTGAAATCTCC+AGG | + | chr3_3:70580154-70580173 | None:intergenic | 50.0% | |
| ! | TAGAGTGACGGAGGAGAAAC+CGG | - | chr3_3:70580333-70580352 | Msa0468890:intron | 50.0% |
| ACAAGGAGGTAAATGGGGGT+CGG | + | chr3_3:70580368-70580387 | None:intergenic | 50.0% | |
| CTGCACAAGGAGGTAAATGG+GGG | + | chr3_3:70580372-70580391 | None:intergenic | 50.0% | |
| GCTGCACAAGGAGGTAAATG+GGG | + | chr3_3:70580373-70580392 | None:intergenic | 50.0% | |
| CGCTGCACAAGGAGGTAAAT+GGG | + | chr3_3:70580374-70580393 | None:intergenic | 50.0% | |
| ACGCTGCACAAGGAGGTAAA+TGG | + | chr3_3:70580375-70580394 | None:intergenic | 50.0% | |
| GTTACTTACGCTGCACAAGG+AGG | + | chr3_3:70580382-70580401 | None:intergenic | 50.0% | |
| GCAGTTACTTACGCTGCACA+AGG | + | chr3_3:70580385-70580404 | None:intergenic | 50.0% | |
| TGTGCAGCGTAAGTAACTGC+CGG | - | chr3_3:70580385-70580404 | Msa0468890:intron | 50.0% | |
| CATGCTTCTCGCGAGAATAC+TGG | + | chr3_3:70580505-70580524 | None:intergenic | 50.0% | |
| CAGTATTCTCGCGAGAAGCA+TGG | - | chr3_3:70580503-70580522 | Msa0468890:five_prime_UTR | 50.0% | |
| TTACAGCATGGTCCTAGCAG+CGG | - | chr3_3:70580762-70580781 | Msa0468890:intron | 50.0% | |
| TTCCTAGTGTGGGAACACCT+TGG | + | chr3_3:70580919-70580938 | None:intergenic | 50.0% | |
| !! | CGCTAACCGACTCTGAAACA+TGG | + | chr3_3:70581269-70581288 | None:intergenic | 50.0% |
| GGAGGTGAGTCTACGCATAA+TGG | + | chr3_3:70581396-70581415 | None:intergenic | 50.0% | |
| TGTCGGAGGAACGTGGAAGA+AGG | + | chr3_3:70577543-70577562 | None:intergenic | 55.0% | |
| AAATGGGGACCGTTACTCGC+AGG | - | chr3_3:70578590-70578609 | Msa0468890:intron | 55.0% | |
| TCGAGGGAAGCAAGCCAGAT+GGG | + | chr3_3:70578972-70578991 | None:intergenic | 55.0% | |
| ATCGAGGGAAGCAAGCCAGA+TGG | + | chr3_3:70578973-70578992 | None:intergenic | 55.0% | |
| GATATACAGGCCGTCGTGCT+TGG | - | chr3_3:70579016-70579035 | Msa0468890:CDS | 55.0% | |
| TCAGCTTCAACAATGCCGGG+AGG | + | chr3_3:70579326-70579345 | None:intergenic | 55.0% | |
| ATTGTGGGGCAAACCCAGTG+AGG | - | chr3_3:70579367-70579386 | Msa0468890:intron | 55.0% | |
| ! | ACTGGTGAAGAAGCATGGCC+TGG | - | chr3_3:70580133-70580152 | Msa0468890:intron | 55.0% |
| ! | AGAGTGACGGAGGAGAAACC+GGG | - | chr3_3:70580334-70580353 | Msa0468890:intron | 55.0% |
| ! | GAGAAGCATGGCGTTGTGTC+TGG | - | chr3_3:70580515-70580534 | Msa0468890:five_prime_UTR | 55.0% |
| ! | CACCAAGGTGTTCCCACACT+AGG | - | chr3_3:70580914-70580933 | Msa0468890:intron | 55.0% |
| !! | CTGAAACCGGGAAAGCACCA+TGG | - | chr3_3:70581052-70581071 | Msa0468890:intron | 55.0% |
| GCAAAACATACCCCCTGCCA+TGG | + | chr3_3:70581072-70581091 | None:intergenic | 55.0% | |
| GGTGAGGGAGAGATGTAGGA+AGG | - | chr3_3:70581237-70581256 | Msa0468890:intron | 55.0% | |
| GGGAGAGATGTAGGAAGGAG+TGG | - | chr3_3:70581242-70581261 | Msa0468890:intron | 55.0% | |
| ! | GCATATTTCAAGTCCGGCGG+TGG | - | chr3_3:70581301-70581320 | Msa0468890:intron | 55.0% |
| GGCCTGGAGATTTCACAGCC+TGG | - | chr3_3:70580149-70580168 | Msa0468890:intron | 60.0% | |
| TGACGGAGGAGAAACCGGGA+TGG | - | chr3_3:70580338-70580357 | Msa0468890:intron | 60.0% | |
| TGGTCCTAGCAGCGGCTTAC+CGG | - | chr3_3:70580770-70580789 | Msa0468890:intron | 60.0% | |
| TTCTCCGGTAAGCCGCTGCT+AGG | + | chr3_3:70580777-70580796 | None:intergenic | 60.0% | |
| !! | AACCGGGAAAGCACCATGGC+AGG | - | chr3_3:70581056-70581075 | Msa0468890:intron | 60.0% |
| !! | ACCGGGAAAGCACCATGGCA+GGG | - | chr3_3:70581057-70581076 | Msa0468890:intron | 60.0% |
| GGCAGGTGAGGGAGAGATGT+AGG | - | chr3_3:70581233-70581252 | Msa0468890:intron | 60.0% | |
| !! | TGAGGGGTGTCGGAGGAACG+TGG | + | chr3_3:70577550-70577569 | None:intergenic | 65.0% |
| TTCCTCCGACACCCCTCAGC+CGG | - | chr3_3:70577552-70577571 | Msa0468890:three_prime_UTR | 65.0% | |
| ! | AAAGCCCGGCTGAGGGGTGT+CGG | + | chr3_3:70577560-70577579 | None:intergenic | 65.0% |
| !! | GAGAGCGCCTCTAGAAGGCG+CGG | + | chr3_3:70578152-70578171 | None:intergenic | 65.0% |
| TGGGGGTCGGAACACCATCC+CGG | + | chr3_3:70580355-70580374 | None:intergenic | 65.0% | |
| CCCCTGCCATGGTGCTTTCC+CGG | + | chr3_3:70581061-70581080 | None:intergenic | 65.0% | |
| !! | CCGGGAAAGCACCATGGCAG+GGG | - | chr3_3:70581058-70581077 | Msa0468890:intron | 65.0% |
| !! | CGGGAAAGCACCATGGCAGG+GGG | - | chr3_3:70581059-70581078 | Msa0468890:intron | 65.0% |
| TCCTCCGACACCCCTCAGCC+GGG | - | chr3_3:70577553-70577572 | Msa0468890:three_prime_UTR | 70.0% | |
| !!! | GCCCGGCTGAGGGGTGTCGG+AGG | + | chr3_3:70577557-70577576 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 70577353 | 70581686 | 70577353 | ID=Msa0468890;Name=Msa0468890 |
| chr3_3 | mRNA | 70577353 | 70581686 | 70577353 | ID=Msa0468890-mRNA-1;Parent=Msa0468890;Name=Msa0468890-mRNA-1;_AED=0.17;_eAED=0.17;_QI=418|1|1|1|0.92|0.86|15|350|393 |
| chr3_3 | exon | 70577353 | 70577801 | 70577353 | ID=Msa0468890-mRNA-1:exon:17167;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70577959 | 70577994 | 70577959 | ID=Msa0468890-mRNA-1:exon:17166;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70578096 | 70578170 | 70578096 | ID=Msa0468890-mRNA-1:exon:17165;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70578330 | 70578383 | 70578330 | ID=Msa0468890-mRNA-1:exon:17164;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70578490 | 70578556 | 70578490 | ID=Msa0468890-mRNA-1:exon:17163;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70578647 | 70578703 | 70578647 | ID=Msa0468890-mRNA-1:exon:17162;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70578802 | 70578915 | 70578802 | ID=Msa0468890-mRNA-1:exon:17161;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70579000 | 70579101 | 70579000 | ID=Msa0468890-mRNA-1:exon:17160;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70579257 | 70579372 | 70579257 | ID=Msa0468890-mRNA-1:exon:17159;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70579457 | 70579540 | 70579457 | ID=Msa0468890-mRNA-1:exon:17158;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70579651 | 70579755 | 70579651 | ID=Msa0468890-mRNA-1:exon:17157;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70579938 | 70580078 | 70579938 | ID=Msa0468890-mRNA-1:exon:17156;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70580199 | 70580310 | 70580199 | ID=Msa0468890-mRNA-1:exon:17155;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70580428 | 70580576 | 70580428 | ID=Msa0468890-mRNA-1:exon:17154;Parent=Msa0468890-mRNA-1 |
| chr3_3 | exon | 70581398 | 70581686 | 70581398 | ID=Msa0468890-mRNA-1:exon:17153;Parent=Msa0468890-mRNA-1 |
| chr3_3 | five_prime_UTR | 70581398 | 70581686 | 70581398 | ID=Msa0468890-mRNA-1:five_prime_utr;Parent=Msa0468890-mRNA-1 |
| chr3_3 | five_prime_UTR | 70580448 | 70580576 | 70580448 | ID=Msa0468890-mRNA-1:five_prime_utr;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70580428 | 70580447 | 70580428 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70580199 | 70580310 | 70580199 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70579938 | 70580078 | 70579938 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70579651 | 70579755 | 70579651 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70579457 | 70579540 | 70579457 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70579257 | 70579372 | 70579257 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70579000 | 70579101 | 70579000 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70578802 | 70578915 | 70578802 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70578647 | 70578703 | 70578647 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70578490 | 70578556 | 70578490 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70578330 | 70578383 | 70578330 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70578096 | 70578170 | 70578096 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70577959 | 70577994 | 70577959 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | CDS | 70577703 | 70577801 | 70577703 | ID=Msa0468890-mRNA-1:cds;Parent=Msa0468890-mRNA-1 |
| chr3_3 | three_prime_UTR | 70577353 | 70577702 | 70577353 | ID=Msa0468890-mRNA-1:three_prime_utr;Parent=Msa0468890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
