Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410550 | G7JVC7 | 95.146 | 103 | 2 | 1 | 1 | 100 | 1 | 103 | 5.15e-63 | 195 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024400 | Msa1410550 | 0.805927 | 1.053837e-49 | -8.615850e-47 |
| Msa0030700 | Msa1410550 | 0.800230 | 1.588591e-48 | -8.615850e-47 |
| Msa0032080 | Msa1410550 | 0.834952 | 2.225021e-56 | -8.615850e-47 |
| Msa0032470 | Msa1410550 | 0.829218 | 5.820051e-55 | -8.615850e-47 |
| Msa0043980 | Msa1410550 | 0.800860 | 1.182048e-48 | -8.615850e-47 |
| Msa0060730 | Msa1410550 | -0.805035 | 1.621058e-49 | -8.615850e-47 |
| Msa0076290 | Msa1410550 | 0.820899 | 5.375661e-53 | -8.615850e-47 |
| Msa0079070 | Msa1410550 | 0.821609 | 3.686911e-53 | -8.615850e-47 |
| Msa0090550 | Msa1410550 | 0.807823 | 4.186477e-50 | -8.615850e-47 |
| Msa0105410 | Msa1410550 | 0.809887 | 1.514940e-50 | -8.615850e-47 |
| Msa0108140 | Msa1410550 | 0.801769 | 7.699595e-49 | -8.615850e-47 |
| Msa0117520 | Msa1410550 | 0.839483 | 1.542165e-57 | -8.615850e-47 |
| Msa1345940 | Msa1410550 | 0.807586 | 4.701258e-50 | -8.615850e-47 |
| Msa1346840 | Msa1410550 | 0.843546 | 1.311459e-58 | -8.615850e-47 |
| Msa1355890 | Msa1410550 | 0.813228 | 2.846319e-51 | -8.615850e-47 |
| Msa1369920 | Msa1410550 | -0.831693 | 1.444237e-55 | -8.615850e-47 |
| Msa1370590 | Msa1410550 | 0.815759 | 7.841839e-52 | -8.615850e-47 |
| Msa1378410 | Msa1410550 | 0.822392 | 2.428076e-53 | -8.615850e-47 |
| Msa1384100 | Msa1410550 | 0.819410 | 1.178671e-52 | -8.615850e-47 |
| Msa1386890 | Msa1410550 | 0.828854 | 7.132607e-55 | -8.615850e-47 |
| Msa1390680 | Msa1410550 | 0.809731 | 1.637229e-50 | -8.615850e-47 |
| Msa1392890 | Msa1410550 | 0.809863 | 1.533014e-50 | -8.615850e-47 |
| Msa1394380 | Msa1410550 | 0.803225 | 3.857819e-49 | -8.615850e-47 |
| Msa1396400 | Msa1410550 | -0.805752 | 1.146793e-49 | -8.615850e-47 |
| Msa1401990 | Msa1410550 | 0.826136 | 3.200397e-54 | -8.615850e-47 |
| Msa1407760 | Msa1410550 | 0.836606 | 8.481782e-57 | -8.615850e-47 |
| Msa1410550 | Msa1419690 | 0.866277 | 3.206176e-65 | -8.615850e-47 |
| Msa1410550 | Msa1419840 | 0.817943 | 2.537250e-52 | -8.615850e-47 |
| Msa1410550 | Msa1430130 | 0.801861 | 7.373328e-49 | -8.615850e-47 |
| Msa1410550 | Msa1432130 | 0.810904 | 9.139855e-51 | -8.615850e-47 |
| Msa1410550 | Msa1437730 | 0.863794 | 1.929477e-64 | -8.615850e-47 |
| Msa1410550 | Msa1442790 | 0.812020 | 5.230433e-51 | -8.615850e-47 |
| Msa1410550 | Msa1442920 | 0.841745 | 3.942837e-58 | -8.615850e-47 |
| Msa1410550 | Msa1444120 | 0.828418 | 9.089115e-55 | -8.615850e-47 |
| Msa1410550 | Msa1446080 | 0.802644 | 5.086357e-49 | -8.615850e-47 |
| Msa1410550 | Msa1450440 | 0.802563 | 5.286125e-49 | -8.615850e-47 |
| Msa1410550 | Msa1452710 | 0.809317 | 2.009155e-50 | -8.615850e-47 |
| Msa1410550 | Msa1458600 | 0.802729 | 4.886924e-49 | -8.615850e-47 |
| Msa0604290 | Msa1410550 | 0.822722 | 2.034443e-53 | -8.615850e-47 |
| Msa0613420 | Msa1410550 | 0.809829 | 1.559231e-50 | -8.615850e-47 |
| Msa0623990 | Msa1410550 | 0.823063 | 1.694755e-53 | -8.615850e-47 |
| Msa0624060 | Msa1410550 | 0.820062 | 8.364987e-53 | -8.615850e-47 |
| Msa0629240 | Msa1410550 | 0.839970 | 1.152064e-57 | -8.615850e-47 |
| Msa0641130 | Msa1410550 | 0.808522 | 2.972224e-50 | -8.615850e-47 |
| Msa0647030 | Msa1410550 | 0.804130 | 2.503640e-49 | -8.615850e-47 |
| Msa0673120 | Msa1410550 | 0.826820 | 2.199213e-54 | -8.615850e-47 |
| Msa0676130 | Msa1410550 | 0.818856 | 1.575567e-52 | -8.615850e-47 |
| Msa0676180 | Msa1410550 | 0.816237 | 6.131840e-52 | -8.615850e-47 |
| Msa0682680 | Msa1410550 | 0.802046 | 6.754491e-49 | -8.615850e-47 |
| Msa0703810 | Msa1410550 | 0.823966 | 1.042032e-53 | -8.615850e-47 |
| Msa0705990 | Msa1410550 | 0.804380 | 2.221074e-49 | -8.615850e-47 |
| Msa0711150 | Msa1410550 | 0.803591 | 3.240288e-49 | -8.615850e-47 |
| Msa0711450 | Msa1410550 | 0.805924 | 1.055129e-49 | -8.615850e-47 |
| Msa0724170 | Msa1410550 | 0.824993 | 5.971506e-54 | -8.615850e-47 |
| Msa0733010 | Msa1410550 | 0.804520 | 2.076851e-49 | -8.615850e-47 |
| Msa0741440 | Msa1410550 | 0.813819 | 2.109669e-51 | -8.615850e-47 |
| Msa0743930 | Msa1410550 | 0.811177 | 7.975245e-51 | -8.615850e-47 |
| Msa0746170 | Msa1410550 | 0.824060 | 9.905133e-54 | -8.615850e-47 |
| Msa0746210 | Msa1410550 | 0.823702 | 1.201440e-53 | -8.615850e-47 |
| Msa0747630 | Msa1410550 | 0.812303 | 4.536958e-51 | -8.615850e-47 |
| Msa0750850 | Msa1410550 | 0.816727 | 4.764734e-52 | -8.615850e-47 |
| Msa0784480 | Msa1410550 | 0.844416 | 7.661918e-59 | -8.615850e-47 |
| Msa0786750 | Msa1410550 | 0.800676 | 1.288927e-48 | -8.615850e-47 |
| Msa0816130 | Msa1410550 | 0.807561 | 4.760470e-50 | -8.615850e-47 |
| Msa0818060 | Msa1410550 | 0.853318 | 2.587070e-61 | -8.615850e-47 |
| Msa0822500 | Msa1410550 | 0.820820 | 5.603852e-53 | -8.615850e-47 |
| Msa0832290 | Msa1410550 | 0.806745 | 7.084172e-50 | -8.615850e-47 |
| Msa0124320 | Msa1410550 | 0.809172 | 2.158179e-50 | -8.615850e-47 |
| Msa0125650 | Msa1410550 | 0.803906 | 2.786991e-49 | -8.615850e-47 |
| Msa0138020 | Msa1410550 | 0.816711 | 4.803822e-52 | -8.615850e-47 |
| Msa0152560 | Msa1410550 | 0.804016 | 2.644054e-49 | -8.615850e-47 |
| Msa0160960 | Msa1410550 | 0.862056 | 6.637410e-64 | -8.615850e-47 |
| Msa0163510 | Msa1410550 | 0.820185 | 7.840566e-53 | -8.615850e-47 |
| Msa0172080 | Msa1410550 | 0.816735 | 4.744533e-52 | -8.615850e-47 |
| Msa0186950 | Msa1410550 | 0.804226 | 2.391841e-49 | -8.615850e-47 |
| Msa0207040 | Msa1410550 | -0.819427 | 1.168409e-52 | -8.615850e-47 |
| Msa0218370 | Msa1410550 | 0.801951 | 7.064918e-49 | -8.615850e-47 |
| Msa0219590 | Msa1410550 | 0.815913 | 7.243915e-52 | -8.615850e-47 |
| Msa1228040 | Msa1410550 | 0.805604 | 1.231915e-49 | -8.615850e-47 |
| Msa1238600 | Msa1410550 | 0.838062 | 3.595216e-57 | -8.615850e-47 |
| Msa1246360 | Msa1410550 | 0.828944 | 6.784404e-55 | -8.615850e-47 |
| Msa1259860 | Msa1410550 | 0.824083 | 9.780604e-54 | -8.615850e-47 |
| Msa1271130 | Msa1410550 | 0.836525 | 8.890638e-57 | -8.615850e-47 |
| Msa1276150 | Msa1410550 | 0.818981 | 1.475545e-52 | -8.615850e-47 |
| Msa1283740 | Msa1410550 | 0.801182 | 1.015745e-48 | -8.615850e-47 |
| Msa1299400 | Msa1410550 | -0.813997 | 1.927557e-51 | -8.615850e-47 |
| Msa1305810 | Msa1410550 | 0.822507 | 2.282956e-53 | -8.615850e-47 |
| Msa1308870 | Msa1410550 | 0.806856 | 6.714517e-50 | -8.615850e-47 |
| Msa1319560 | Msa1410550 | 0.810305 | 1.231632e-50 | -8.615850e-47 |
| Msa1322630 | Msa1410550 | 0.817221 | 3.689941e-52 | -8.615850e-47 |
| Msa1329200 | Msa1410550 | 0.801255 | 9.816987e-49 | -8.615850e-47 |
| Msa1331050 | Msa1410550 | -0.819245 | 1.284963e-52 | -8.615850e-47 |
| Msa1331320 | Msa1410550 | 0.802369 | 5.796474e-49 | -8.615850e-47 |
| Msa1331760 | Msa1410550 | 0.801660 | 8.108931e-49 | -8.615850e-47 |
| Msa0371950 | Msa1410550 | 0.816005 | 6.910173e-52 | -8.615850e-47 |
| Msa0379690 | Msa1410550 | 0.817559 | 3.097435e-52 | -8.615850e-47 |
| Msa0382370 | Msa1410550 | 0.826357 | 2.835497e-54 | -8.615850e-47 |
| Msa0385500 | Msa1410550 | 0.806664 | 7.371137e-50 | -8.615850e-47 |
| Msa0386010 | Msa1410550 | 0.806385 | 8.440049e-50 | -8.615850e-47 |
| Msa0388730 | Msa1410550 | 0.810611 | 1.057626e-50 | -8.615850e-47 |
| Msa0389210 | Msa1410550 | 0.823089 | 1.671297e-53 | -8.615850e-47 |
| Msa0394120 | Msa1410550 | 0.800159 | 1.642175e-48 | -8.615850e-47 |
| Msa0403770 | Msa1410550 | 0.813349 | 2.677196e-51 | -8.615850e-47 |
| Msa0417330 | Msa1410550 | 0.805726 | 1.161631e-49 | -8.615850e-47 |
| Msa0432160 | Msa1410550 | 0.853101 | 2.985146e-61 | -8.615850e-47 |
| Msa0434540 | Msa1410550 | 0.817994 | 2.470464e-52 | -8.615850e-47 |
| Msa0468890 | Msa1410550 | 0.820044 | 8.443485e-53 | -8.615850e-47 |
| Msa0470880 | Msa1410550 | 0.828714 | 7.710943e-55 | -8.615850e-47 |
| Msa0476680 | Msa1410550 | 0.856094 | 4.059369e-62 | -8.615850e-47 |
| Msa0478370 | Msa1410550 | 0.828139 | 1.061652e-54 | -8.615850e-47 |
| Msa0985180 | Msa1410550 | 0.819576 | 1.080356e-52 | -8.615850e-47 |
| Msa0992510 | Msa1410550 | 0.814539 | 1.463702e-51 | -8.615850e-47 |
| Msa0994910 | Msa1410550 | 0.822970 | 1.781659e-53 | -8.615850e-47 |
| Msa0999680 | Msa1410550 | 0.822653 | 2.111475e-53 | -8.615850e-47 |
| Msa1032770 | Msa1410550 | 0.815288 | 9.980409e-52 | -8.615850e-47 |
| Msa1047760 | Msa1410550 | 0.802048 | 6.748422e-49 | -8.615850e-47 |
| Msa1059470 | Msa1410550 | 0.809598 | 1.748594e-50 | -8.615850e-47 |
| Msa1062040 | Msa1410550 | 0.818798 | 1.624285e-52 | -8.615850e-47 |
| Msa1063420 | Msa1410550 | 0.801003 | 1.105013e-48 | -8.615850e-47 |
| Msa1072260 | Msa1410550 | 0.806777 | 6.977123e-50 | -8.615850e-47 |
| Msa1081790 | Msa1410550 | -0.805680 | 1.187874e-49 | -8.615850e-47 |
| Msa1089450 | Msa1410550 | 0.808373 | 3.197851e-50 | -8.615850e-47 |
| Msa1089460 | Msa1410550 | 0.815588 | 8.558873e-52 | -8.615850e-47 |
| Msa1096070 | Msa1410550 | 0.846524 | 2.058101e-59 | -8.615850e-47 |
| Msa1100130 | Msa1410550 | -0.816427 | 5.560485e-52 | -8.615850e-47 |
| Msa1104560 | Msa1410550 | 0.829810 | 4.180489e-55 | -8.615850e-47 |
| Msa0241140 | Msa1410550 | 0.820147 | 7.999189e-53 | -8.615850e-47 |
| Msa0257490 | Msa1410550 | 0.808829 | 2.555807e-50 | -8.615850e-47 |
| Msa0259230 | Msa1410550 | 0.812130 | 4.950445e-51 | -8.615850e-47 |
| Msa0259680 | Msa1410550 | 0.823024 | 1.730259e-53 | -8.615850e-47 |
| Msa0278580 | Msa1410550 | 0.826478 | 2.654147e-54 | -8.615850e-47 |
| Msa0296790 | Msa1410550 | 0.803257 | 3.801147e-49 | -8.615850e-47 |
| Msa0309270 | Msa1410550 | 0.800509 | 1.394159e-48 | -8.615850e-47 |
| Msa0317960 | Msa1410550 | 0.802602 | 5.190639e-49 | -8.615850e-47 |
| Msa0317970 | Msa1410550 | 0.821113 | 4.797637e-53 | -8.615850e-47 |
| Msa0318680 | Msa1410550 | 0.807311 | 5.377096e-50 | -8.615850e-47 |
| Msa0336300 | Msa1410550 | 0.808503 | 2.999539e-50 | -8.615850e-47 |
| Msa0341480 | Msa1410550 | 0.826617 | 2.458212e-54 | -8.615850e-47 |
| Msa0347750 | Msa1410550 | 0.820159 | 7.945965e-53 | -8.615850e-47 |
| Msa1107200 | Msa1410550 | 0.816967 | 4.207868e-52 | -8.615850e-47 |
| Msa1122150 | Msa1410550 | 0.834513 | 2.870832e-56 | -8.615850e-47 |
| Msa1160560 | Msa1410550 | 0.811000 | 8.714467e-51 | -8.615850e-47 |
| Msa1166090 | Msa1410550 | -0.804566 | 2.031890e-49 | -8.615850e-47 |
| Msa1178580 | Msa1410550 | 0.821131 | 4.752737e-53 | -8.615850e-47 |
| Msa1184690 | Msa1410550 | 0.833283 | 5.830631e-56 | -8.615850e-47 |
| Msa1188180 | Msa1410550 | 0.805623 | 1.220662e-49 | -8.615850e-47 |
| Msa1207310 | Msa1410550 | 0.812240 | 4.682723e-51 | -8.615850e-47 |
| Msa1211230 | Msa1410550 | -0.819390 | 1.190873e-52 | -8.615850e-47 |
| Msa1211420 | Msa1410550 | -0.810158 | 1.324793e-50 | -8.615850e-47 |
| Msa1212050 | Msa1410550 | 0.854840 | 9.414033e-62 | -8.615850e-47 |
| Msa1212130 | Msa1410550 | 0.818910 | 1.532051e-52 | -8.615850e-47 |
| Msa1213890 | Msa1410550 | 0.844348 | 7.993953e-59 | -8.615850e-47 |
| Msa1213980 | Msa1410550 | 0.822250 | 2.619250e-53 | -8.615850e-47 |
| Msa1218580 | Msa1410550 | 0.803697 | 3.079760e-49 | -8.615850e-47 |
| Msa1222450 | Msa1410550 | 0.805478 | 1.309195e-49 | -8.615850e-47 |
| Msa0482940 | Msa1410550 | 0.822135 | 2.785470e-53 | -8.615850e-47 |
| Msa0491000 | Msa1410550 | 0.803341 | 3.650489e-49 | -8.615850e-47 |
| Msa0521010 | Msa1410550 | 0.858696 | 6.898363e-63 | -8.615850e-47 |
| Msa0522500 | Msa1410550 | 0.813226 | 2.849615e-51 | -8.615850e-47 |
| Msa0527540 | Msa1410550 | 0.832319 | 1.011515e-55 | -8.615850e-47 |
| Msa0542560 | Msa1410550 | 0.818433 | 1.965696e-52 | -8.615850e-47 |
| Msa0545050 | Msa1410550 | 0.823540 | 1.310909e-53 | -8.615850e-47 |
| Msa0566350 | Msa1410550 | 0.829486 | 5.010892e-55 | -8.615850e-47 |
| Msa0566750 | Msa1410550 | 0.821573 | 3.757109e-53 | -8.615850e-47 |
| Msa0567520 | Msa1410550 | 0.811472 | 6.882956e-51 | -8.615850e-47 |
| Msa0592270 | Msa1410550 | 0.800170 | 1.634035e-48 | -8.615850e-47 |
| Msa0600450 | Msa1410550 | 0.803862 | 2.846368e-49 | -8.615850e-47 |
| Msa0600590 | Msa1410550 | 0.807464 | 4.991347e-50 | -8.615850e-47 |
| Msa0846860 | Msa1410550 | 0.815459 | 9.143463e-52 | -8.615850e-47 |
| Msa0858390 | Msa1410550 | 0.837230 | 5.875054e-57 | -8.615850e-47 |
| Msa0870510 | Msa1410550 | 0.815031 | 1.138334e-51 | -8.615850e-47 |
| Msa0878220 | Msa1410550 | 0.845548 | 3.792258e-59 | -8.615850e-47 |
| Msa0880810 | Msa1410550 | 0.808785 | 2.610865e-50 | -8.615850e-47 |
| Msa0888260 | Msa1410550 | 0.803403 | 3.545497e-49 | -8.615850e-47 |
| Msa0894710 | Msa1410550 | 0.825928 | 3.587284e-54 | -8.615850e-47 |
| Msa0899970 | Msa1410550 | 0.800822 | 1.203559e-48 | -8.615850e-47 |
| Msa0921420 | Msa1410550 | 0.810703 | 1.010288e-50 | -8.615850e-47 |
| Msa0943970 | Msa1410550 | 0.874653 | 5.709940e-68 | -8.615850e-47 |
| Msa0944020 | Msa1410550 | 0.849509 | 3.088685e-60 | -8.615850e-47 |
| Msa0960390 | Msa1410550 | 0.813102 | 3.033881e-51 | -8.615850e-47 |
| Msa0965080 | Msa1410550 | 0.811514 | 6.738996e-51 | -8.615850e-47 |
| Msa0965290 | Msa1410550 | 0.823073 | 1.685562e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410550 | MtrunA17_Chr4g0063471 | 95.146 | 103 | 2 | 1 | 1 | 100 | 1 | 103 | 9.92e-67 | 195 |
| Msa1410550 | MtrunA17_Chr4g0003631 | 55.319 | 94 | 30 | 4 | 1 | 83 | 1 | 93 | 1.76e-24 | 89.0 |
| Msa1410550 | MtrunA17_Chr2g0332771 | 40.496 | 121 | 46 | 4 | 1 | 98 | 1 | 118 | 2.07e-21 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410550 | AT5G20100.1 | 47.312 | 93 | 33 | 4 | 4 | 81 | 3 | 94 | 1.59e-17 | 72.0 |
Find 21 sgRNAs with CRISPR-Local
Find 24 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACGTTGACCGATCGATA+TGG | 0.363606 | tig0023670:+60250 | None:intergenic |
| AAGGTTCATCAGGATTGGTT+TGG | 0.367840 | tig0023670:-60369 | Msa1410550:CDS |
| TGGGATGATAAATTCTTGTC+TGG | 0.375061 | tig0023670:-60349 | Msa1410550:CDS |
| AGGTTCATCAGGATTGGTTT+GGG | 0.391343 | tig0023670:-60368 | Msa1410550:CDS |
| TTCAGGAGACAAGGTTCATC+AGG | 0.416255 | tig0023670:-60379 | Msa1410550:CDS |
| AGAAATCATTAGCATCATTC+AGG | 0.448473 | tig0023670:-60396 | Msa1410550:CDS |
| GAGACAAGGTTCATCAGGAT+TGG | 0.459463 | tig0023670:-60374 | Msa1410550:CDS |
| AAACCACATGTTGAAACCTT+AGG | 0.466270 | tig0023670:+60202 | None:intergenic |
| TTGGAGAGAAGCAGATCAGC+TGG | 0.478654 | tig0023670:-60280 | Msa1410550:CDS |
| TTTGTGGAAGAAGCAGCAAC+TGG | 0.482811 | tig0023670:+60160 | None:intergenic |
| GAACAAGAGAGTGCATCAAC+TGG | 0.483164 | tig0023670:-60307 | Msa1410550:CDS |
| AATTGACCCACCTTCTCCTA+AGG | 0.490014 | tig0023670:-60218 | Msa1410550:CDS |
| TCTTGATTTAGGATTATTTG+TGG | 0.511223 | tig0023670:+60144 | None:intergenic |
| TCTCCTAAGGTTTCAACATG+TGG | 0.535168 | tig0023670:-60205 | Msa1410550:CDS |
| GTTGAAACCTTAGGAGAAGG+TGG | 0.589036 | tig0023670:+60211 | None:intergenic |
| CATGTTGAAACCTTAGGAGA+AGG | 0.634843 | tig0023670:+60208 | None:intergenic |
| GAAGGTGGGTCAATTGATGT+TGG | 0.642101 | tig0023670:+60226 | None:intergenic |
| TGGAGCAAGACCATATCGAT+CGG | 0.648883 | tig0023670:-60260 | Msa1410550:CDS |
| TTGAAACCTTAGGAGAAGGT+GGG | 0.649865 | tig0023670:+60212 | None:intergenic |
| TTAGCATCATTCAGGAGACA+AGG | 0.658604 | tig0023670:-60388 | Msa1410550:CDS |
| GAGTGCATCAACTGGCACGT+TGG | 0.684698 | tig0023670:-60299 | Msa1410550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTGATTTAGGATTATTTG+TGG | + | tig0023670:60397-60416 | None:intergenic | 25.0% |
| !! | GATCTTCTTTTTCTTGATTT+AGG | + | tig0023670:60408-60427 | None:intergenic | 25.0% |
| AGAAATCATTAGCATCATTC+AGG | - | tig0023670:60142-60161 | Msa1410550:CDS | 30.0% | |
| TGGGATGATAAATTCTTGTC+TGG | - | tig0023670:60189-60208 | Msa1410550:CDS | 35.0% | |
| AAACCACATGTTGAAACCTT+AGG | + | tig0023670:60339-60358 | None:intergenic | 35.0% | |
| ! | GTTTCAACATGTGGTTTTTG+TGG | - | tig0023670:60342-60361 | Msa1410550:CDS | 35.0% |
| !!! | TGTGGTTTTTGTGGTTTGTT+TGG | - | tig0023670:60351-60370 | Msa1410550:CDS | 35.0% |
| TTAGCATCATTCAGGAGACA+AGG | - | tig0023670:60150-60169 | Msa1410550:CDS | 40.0% | |
| !! | AAGGTTCATCAGGATTGGTT+TGG | - | tig0023670:60169-60188 | Msa1410550:CDS | 40.0% |
| !! | AGGTTCATCAGGATTGGTTT+GGG | - | tig0023670:60170-60189 | Msa1410550:CDS | 40.0% |
| TTGAAACCTTAGGAGAAGGT+GGG | + | tig0023670:60329-60348 | None:intergenic | 40.0% | |
| CATGTTGAAACCTTAGGAGA+AGG | + | tig0023670:60333-60352 | None:intergenic | 40.0% | |
| TCTCCTAAGGTTTCAACATG+TGG | - | tig0023670:60333-60352 | Msa1410550:CDS | 40.0% | |
| TTCAGGAGACAAGGTTCATC+AGG | - | tig0023670:60159-60178 | Msa1410550:CDS | 45.0% | |
| GAGACAAGGTTCATCAGGAT+TGG | - | tig0023670:60164-60183 | Msa1410550:CDS | 45.0% | |
| ! | GAACAAGAGAGTGCATCAAC+TGG | - | tig0023670:60231-60250 | Msa1410550:CDS | 45.0% |
| TGGAGCAAGACCATATCGAT+CGG | - | tig0023670:60278-60297 | Msa1410550:CDS | 45.0% | |
| GAAGGTGGGTCAATTGATGT+TGG | + | tig0023670:60315-60334 | None:intergenic | 45.0% | |
| AATTGACCCACCTTCTCCTA+AGG | - | tig0023670:60320-60339 | Msa1410550:CDS | 45.0% | |
| GTTGAAACCTTAGGAGAAGG+TGG | + | tig0023670:60330-60349 | None:intergenic | 45.0% | |
| TTTGTGGAAGAAGCAGCAAC+TGG | + | tig0023670:60381-60400 | None:intergenic | 45.0% | |
| TTGGAGAGAAGCAGATCAGC+TGG | - | tig0023670:60258-60277 | Msa1410550:CDS | 50.0% | |
| GCAACGTTGACCGATCGATA+TGG | + | tig0023670:60291-60310 | None:intergenic | 50.0% | |
| GAGTGCATCAACTGGCACGT+TGG | - | tig0023670:60239-60258 | Msa1410550:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023670 | gene | 60129 | 60431 | 60129 | ID=Msa1410550;Name=Msa1410550 |
| tig0023670 | mRNA | 60129 | 60431 | 60129 | ID=Msa1410550-mRNA-1;Parent=Msa1410550;Name=Msa1410550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|100 |
| tig0023670 | exon | 60129 | 60431 | 60129 | ID=Msa1410550-mRNA-1:exon:26617;Parent=Msa1410550-mRNA-1 |
| tig0023670 | CDS | 60129 | 60431 | 60129 | ID=Msa1410550-mRNA-1:cds;Parent=Msa1410550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
