Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469240 | XP_003601934.2 | 89.000 | 400 | 35 | 2 | 1 | 397 | 1 | 394 | 0.0 | 716 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469240 | G7J3Q0 | 89.000 | 400 | 35 | 2 | 1 | 397 | 1 | 394 | 0.0 | 716 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa0469240 | 0.800105 | 1.684376e-48 | -8.615850e-47 |
| Msa0195770 | Msa0469240 | 0.832077 | 1.161454e-55 | -8.615850e-47 |
| Msa0423090 | Msa0469240 | 0.862907 | 3.633901e-64 | -8.615850e-47 |
| Msa0463460 | Msa0469240 | 0.808457 | 3.068672e-50 | -8.615850e-47 |
| Msa0469240 | Msa0469290 | 0.807165 | 5.773726e-50 | -8.615850e-47 |
| Msa0469240 | Msa0506530 | -0.800880 | 1.171120e-48 | -8.615850e-47 |
| Msa0469240 | Msa0509020 | 0.804051 | 2.600790e-49 | -8.615850e-47 |
| Msa0469240 | Msa0719490 | -0.810166 | 1.319507e-50 | -8.615850e-47 |
| Msa0469240 | Msa0722930 | 0.802725 | 4.895446e-49 | -8.615850e-47 |
| Msa0469240 | Msa0725220 | 0.807662 | 4.530392e-50 | -8.615850e-47 |
| Msa0469240 | Msa0769390 | 0.862070 | 6.571903e-64 | -8.615850e-47 |
| Msa0469240 | Msa0789690 | 0.856730 | 2.640248e-62 | -8.615850e-47 |
| Msa0469240 | Msa0831760 | 0.800561 | 1.360245e-48 | -8.615850e-47 |
| Msa0469240 | Msa0832370 | 0.854583 | 1.117590e-61 | -8.615850e-47 |
| Msa0469240 | Msa0980440 | 0.812863 | 3.422791e-51 | -8.615850e-47 |
| Msa0469240 | Msa1000020 | 0.802360 | 5.822323e-49 | -8.615850e-47 |
| Msa0469240 | Msa1008490 | 0.819001 | 1.460507e-52 | -8.615850e-47 |
| Msa0469240 | Msa1009000 | 0.804335 | 2.269267e-49 | -8.615850e-47 |
| Msa0469240 | Msa1038050 | 0.807111 | 5.928876e-50 | -8.615850e-47 |
| Msa0469240 | Msa1069310 | 0.808234 | 3.423638e-50 | -8.615850e-47 |
| Msa0469240 | Msa1083410 | 0.801250 | 9.837870e-49 | -8.615850e-47 |
| Msa0469240 | Msa1098560 | 0.804642 | 1.958431e-49 | -8.615850e-47 |
| Msa0469240 | Msa1271300 | 0.825869 | 3.704643e-54 | -8.615850e-47 |
| Msa0469240 | Msa1329990 | 0.811037 | 8.554134e-51 | -8.615850e-47 |
| Msa0469240 | Msa1358960 | 0.809640 | 1.712434e-50 | -8.615850e-47 |
| Msa0469240 | Msa1458900 | 0.857296 | 1.798354e-62 | -8.615850e-47 |
| Msa0257250 | Msa0469240 | 0.807485 | 4.940124e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469240 | MtrunA17_Chr3g0123841 | 89.000 | 400 | 35 | 2 | 1 | 397 | 1 | 394 | 0.0 | 716 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469240 | AT5G10320.1 | 48.301 | 412 | 179 | 8 | 1 | 390 | 1 | 400 | 1.17e-122 | 361 |
| Msa0469240 | AT5G10320.2 | 48.544 | 412 | 177 | 9 | 1 | 390 | 1 | 399 | 1.89e-122 | 360 |
| Msa0469240 | AT5G10320.6 | 53.041 | 296 | 112 | 5 | 110 | 390 | 12 | 295 | 5.42e-101 | 302 |
| Msa0469240 | AT5G10320.5 | 43.344 | 323 | 149 | 8 | 1 | 301 | 1 | 311 | 1.11e-74 | 236 |
| Msa0469240 | AT5G10320.3 | 43.653 | 323 | 147 | 9 | 1 | 301 | 1 | 310 | 1.62e-74 | 235 |
| Msa0469240 | AT5G10320.4 | 43.260 | 319 | 146 | 9 | 1 | 297 | 1 | 306 | 1.11e-71 | 227 |
Find 96 sgRNAs with CRISPR-Local
Find 465 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTCAGAAATGTGTATT+TGG | 0.158135 | 3_3:+71040993 | Msa0469240:three_prime_UTR |
| GTAGAAAGCAACACAAAATT+TGG | 0.212432 | 3_3:+71037339 | Msa0469240:intron |
| CGCATGTTTATCAGAATATA+TGG | 0.213889 | 3_3:+71038830 | Msa0469240:CDS |
| ATCACCTCATCTTTCCTTGT+TGG | 0.304631 | 3_3:-71037239 | None:intergenic |
| CACAGAGAGCTATATTTATC+AGG | 0.306293 | 3_3:+71036312 | Msa0469240:CDS |
| TCTTTCAATTTCAGAGTTCT+TGG | 0.308869 | 3_3:+71037955 | Msa0469240:CDS |
| AAGTCTTGACCAATCATAAT+TGG | 0.316188 | 3_3:-71040934 | None:intergenic |
| ACAACGCATGGTTTCATTCA+TGG | 0.325233 | 3_3:+71033648 | Msa0469240:CDS |
| AATGGAAGAGCTACGGAAAC+TGG | 0.335201 | 3_3:+71033618 | Msa0469240:exon |
| CACAAGTCTACTGGAATTAC+TGG | 0.342434 | 3_3:+71040517 | Msa0469240:CDS |
| CATGACAGAGCTTTCTTTCA+AGG | 0.348227 | 3_3:-71037566 | None:intergenic |
| TGTTTCTCGACTGACCCATT+TGG | 0.398597 | 3_3:+71037367 | Msa0469240:CDS |
| GTTTCTGATCCAATTATGAT+TGG | 0.402224 | 3_3:+71040925 | Msa0469240:three_prime_UTR |
| TAGACACGGGGAAGAGTATT+GGG | 0.416091 | 3_3:+71037542 | Msa0469240:CDS |
| GGTTTCGGACAAAATCTTGT+TGG | 0.418388 | 3_3:+71035530 | Msa0469240:intron |
| GTTTGACATACCAACATAGA+AGG | 0.422519 | 3_3:-71038866 | None:intergenic |
| ATAGTCACAAGTGGTCCAAA+TGG | 0.426598 | 3_3:-71037382 | None:intergenic |
| TGTTTCCATTTCAAGTGTCT+TGG | 0.429338 | 3_3:+71040809 | Msa0469240:three_prime_UTR |
| ATTACCTTCTTCAGTGGCTT+CGG | 0.429878 | 3_3:-71040576 | None:intergenic |
| TAGAGGGCTGGAGTTGAATT+CGG | 0.452429 | 3_3:+71040846 | Msa0469240:three_prime_UTR |
| GAAGGCCGAGGAGTTGCATA+TGG | 0.458790 | 3_3:+71037928 | Msa0469240:intron |
| CCTAGTCTTCGCAATCTACA+TGG | 0.461264 | 3_3:-71041073 | None:intergenic |
| TTTCACTTTCATTATTTCAC+TGG | 0.477750 | 3_3:-71040900 | None:intergenic |
| AGCCCTCTATCATCGGCATA+TGG | 0.481979 | 3_3:-71040832 | None:intergenic |
| TGGCCATATGCCGATGATAG+AGG | 0.482559 | 3_3:+71040829 | Msa0469240:three_prime_UTR |
| CGGGCTGGATTCCATGCAAA+AGG | 0.483105 | 3_3:+71035628 | Msa0469240:CDS |
| TTCAACTGCCCCTTCTATGT+TGG | 0.484221 | 3_3:+71038856 | Msa0469240:CDS |
| CTCTCTGTGAATGAAAGAAT+AGG | 0.489105 | 3_3:-71036298 | None:intergenic |
| TTTGAGAAACGTGGTCGCGC+TGG | 0.490044 | 3_3:+71033575 | Msa0469240:five_prime_UTR |
| TATGGCCAAGACACTTGAAA+TGG | 0.490544 | 3_3:-71040814 | None:intergenic |
| CCATGTAGATTGCGAAGACT+AGG | 0.493453 | 3_3:+71041073 | Msa0469240:three_prime_UTR |
| ATGAAAACATAGCCATGATC+GGG | 0.494602 | 3_3:+71035609 | Msa0469240:CDS |
| TCCTCATCTTGAATCACAGT+TGG | 0.495108 | 3_3:-71040710 | None:intergenic |
| TGTAGCTGTTATCATGCAGT+TGG | 0.497962 | 3_3:+71037187 | Msa0469240:intron |
| CATGGAATCCAGCCCGATCA+TGG | 0.498561 | 3_3:-71035621 | None:intergenic |
| GTGTGAGGGTTAAACTAGAA+TGG | 0.499353 | 3_3:+71033600 | Msa0469240:exon |
| TTAGACACGGGGAAGAGTAT+TGG | 0.501793 | 3_3:+71037541 | Msa0469240:CDS |
| CTATCAACTGCAAGGAGCTA+AGG | 0.502607 | 3_3:+71037789 | Msa0469240:CDS |
| AAGCAAGTACACAAGTCTAC+TGG | 0.503759 | 3_3:+71040508 | Msa0469240:CDS |
| TTCAATTTCAGAGTTCTTGG+TGG | 0.505745 | 3_3:+71037958 | Msa0469240:CDS |
| AATCATAATTGGATCAGAAA+CGG | 0.508810 | 3_3:-71040923 | None:intergenic |
| TAATTTCCGAGCTTATGCCT+AGG | 0.515468 | 3_3:+71033788 | Msa0469240:CDS |
| AAACAAATTACCTTCTTCAG+TGG | 0.517146 | 3_3:-71040582 | None:intergenic |
| ACCAAATTCTGCAGGTGGAA+AGG | 0.517704 | 3_3:+71040655 | Msa0469240:intron |
| GATTTCTTCTCCGTTTGTTG+AGG | 0.532183 | 3_3:+71033908 | Msa0469240:intron |
| AATGAAAACATAGCCATGAT+CGG | 0.532311 | 3_3:+71035608 | Msa0469240:CDS |
| GAAAGAGCATGAAATTAGCT+AGG | 0.532821 | 3_3:-71033720 | None:intergenic |
| TAGTCACAAGTGGTCCAAAT+GGG | 0.534054 | 3_3:-71037381 | None:intergenic |
| AATTTCCGAGCTTATGCCTA+GGG | 0.534663 | 3_3:+71033789 | Msa0469240:CDS |
| AAGGTATCAGAGCACCCTCT+TGG | 0.536712 | 3_3:+71040674 | Msa0469240:CDS |
| TGGTAGCTCAGAGATAACTT+TGG | 0.538447 | 3_3:-71040542 | None:intergenic |
| TGTGCCGAAGCCACTGAAGA+AGG | 0.539716 | 3_3:+71040572 | Msa0469240:CDS |
| AAGAATTTGAAGATCGATTG+TGG | 0.540222 | 3_3:-71036274 | None:intergenic |
| CTCTTTCTGTTAGAACCTTG+CGG | 0.540977 | 3_3:+71033736 | Msa0469240:CDS |
| TCTTATTGATGATGTGATGA+AGG | 0.542228 | 3_3:+71037720 | Msa0469240:CDS |
| ATCAAATATTAACTGTGCAA+TGG | 0.542482 | 3_3:+71040877 | Msa0469240:three_prime_UTR |
| ATGACAGAGCTTTCTTTCAA+GGG | 0.544675 | 3_3:-71037565 | None:intergenic |
| AAACATAGCCATGATCGGGC+TGG | 0.546841 | 3_3:+71035613 | Msa0469240:CDS |
| CAACTCCAGCCCTCTATCAT+CGG | 0.547002 | 3_3:-71040839 | None:intergenic |
| GGCCATATGCCGATGATAGA+GGG | 0.550359 | 3_3:+71040830 | Msa0469240:three_prime_UTR |
| GTTTCATTCATGGATTCTCA+CGG | 0.555421 | 3_3:+71033658 | Msa0469240:CDS |
| ATATACTTACAAAATCCTCA+AGG | 0.561182 | 3_3:-71035661 | None:intergenic |
| TAAGCAGCATTTGTCGTCGA+TGG | 0.562579 | 3_3:-71033767 | None:intergenic |
| ATATGCCGATGATAGAGGGC+TGG | 0.570702 | 3_3:+71040834 | Msa0469240:three_prime_UTR |
| TGCACTGATAAACGAAGAAG+AGG | 0.571108 | 3_3:+71037587 | Msa0469240:CDS |
| AAACTCCATATGCAACTCCT+CGG | 0.572586 | 3_3:-71037933 | None:intergenic |
| GCATGAAATTAGCTAGGAAG+CGG | 0.575583 | 3_3:-71033714 | None:intergenic |
| AAACTAGAATGGAAGAGCTA+CGG | 0.576554 | 3_3:+71033611 | Msa0469240:exon |
| TCCAACTGTGATTCAAGATG+AGG | 0.586293 | 3_3:+71040709 | Msa0469240:CDS |
| TAGATTGCGAAGACTAGGAA+TGG | 0.592155 | 3_3:+71041078 | Msa0469240:three_prime_UTR |
| TAACTGAAGAACTTAGACAC+GGG | 0.593865 | 3_3:+71037529 | Msa0469240:CDS |
| CAGAGCACCCTCTTGGTACG+TGG | 0.604824 | 3_3:+71040681 | Msa0469240:CDS |
| TGATACGCATCCTCAACAAA+CGG | 0.605354 | 3_3:-71033918 | None:intergenic |
| AGCATTTGTCGTCGATGGCG+AGG | 0.608319 | 3_3:-71033762 | None:intergenic |
| AAAGGCAAATTCTACCCTTG+AGG | 0.610363 | 3_3:+71035646 | Msa0469240:CDS |
| GTGGTCGCGCTGGTTGTGTG+AGG | 0.610438 | 3_3:+71033585 | Msa0469240:five_prime_UTR |
| CTTCTTCTCTATCAACTGCA+AGG | 0.611861 | 3_3:+71037781 | Msa0469240:CDS |
| GAAGCGGTTACAGTGATGAT+CGG | 0.615210 | 3_3:-71033698 | None:intergenic |
| TATACTTACAAAATCCTCAA+GGG | 0.623941 | 3_3:-71035660 | None:intergenic |
| GTTGCAGAACAAGAGAGTAA+TGG | 0.624688 | 3_3:+71033948 | Msa0469240:CDS |
| ACTGGAGAAGGTACAACGCA+TGG | 0.627019 | 3_3:+71033636 | Msa0469240:CDS |
| TGGTCGCGCTGGTTGTGTGA+GGG | 0.627531 | 3_3:+71033586 | Msa0469240:five_prime_UTR |
| TTAGGCAAAGTGCATTACTG+AGG | 0.636995 | 3_3:+71040481 | Msa0469240:intron |
| AAATACTTGATCTGTGTCAG+AGG | 0.640305 | 3_3:+71040768 | Msa0469240:exon |
| TTTGACATACCAACATAGAA+GGG | 0.652525 | 3_3:-71038865 | None:intergenic |
| TCGATGGCGAGGTCACCGCA+AGG | 0.655488 | 3_3:-71033751 | None:intergenic |
| TTGCACATATTTGAGAAACG+TGG | 0.664332 | 3_3:+71033566 | Msa0469240:five_prime_UTR |
| ACTGACCCTAGGCATAAGCT+CGG | 0.665924 | 3_3:-71033794 | None:intergenic |
| TTGACATACCAACATAGAAG+GGG | 0.668333 | 3_3:-71038864 | None:intergenic |
| ATTTGCTGCAAACACCAACA+AGG | 0.670765 | 3_3:+71037225 | Msa0469240:CDS |
| GGAATACACCACGTACCAAG+AGG | 0.678597 | 3_3:-71040689 | None:intergenic |
| AGAGCTACGGAAACTGGAGA+AGG | 0.679834 | 3_3:+71033624 | Msa0469240:CDS |
| AACACCAACAAGGAAAGATG+AGG | 0.680119 | 3_3:+71037235 | Msa0469240:CDS |
| GAATACACCACGTACCAAGA+GGG | 0.698160 | 3_3:-71040688 | None:intergenic |
| ATAACTGAAGAACTTAGACA+CGG | 0.701868 | 3_3:+71037528 | Msa0469240:CDS |
| AACTGAAGAACTTAGACACG+GGG | 0.713202 | 3_3:+71037530 | Msa0469240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTAATTTAAATTAATA+GGG | - | chr3_3:71039304-71039323 | None:intergenic | 0.0% |
| !! | AATAATTAATTTAAATTAAT+AGG | - | chr3_3:71039305-71039324 | None:intergenic | 0.0% |
| !! | AAATCAAATAAATAAAACTA+AGG | + | chr3_3:71034640-71034659 | Msa0469240:intron | 10.0% |
| !! | AATCAAATAAATAAAACTAA+GGG | + | chr3_3:71034641-71034660 | Msa0469240:intron | 10.0% |
| !! | ATATTATTCACAAATATATT+TGG | + | chr3_3:71034714-71034733 | Msa0469240:intron | 10.0% |
| !!! | TAATGTTTTGAAAATTTATT+TGG | + | chr3_3:71034756-71034775 | Msa0469240:intron | 10.0% |
| !! | AAAAATAATAATTTATTGCA+TGG | + | chr3_3:71035581-71035600 | Msa0469240:CDS | 10.0% |
| !!! | ACTTATCTAATTTTAATAAA+AGG | - | chr3_3:71039034-71039053 | None:intergenic | 10.0% |
| !!! | CAGTTTTTTTTTTTTTTTAT+GGG | - | chr3_3:71039378-71039397 | None:intergenic | 10.0% |
| !!! | AATATATAAAATTTTACAAC+GGG | - | chr3_3:71039518-71039537 | None:intergenic | 10.0% |
| !!! | GAATATATAAAATTTTACAA+CGG | - | chr3_3:71039519-71039538 | None:intergenic | 10.0% |
| !!! | GTAAAAATATTGTTTTTATT+AGG | - | chr3_3:71040119-71040138 | None:intergenic | 10.0% |
| !!! | TTTATGCTTATTTTCTATTT+AGG | + | chr3_3:71034005-71034024 | Msa0469240:intron | 15.0% |
| !! | ATATAGAAAAGTGAAAATAA+GGG | + | chr3_3:71034295-71034314 | Msa0469240:intron | 15.0% |
| !!! | TGTTTAAAATCATCTTATAT+TGG | + | chr3_3:71034356-71034375 | Msa0469240:intron | 15.0% |
| !!! | GTTTAAAATCATCTTATATT+GGG | + | chr3_3:71034357-71034376 | Msa0469240:intron | 15.0% |
| !! | TTAATCAATATGGTAAATAA+GGG | - | chr3_3:71036065-71036084 | None:intergenic | 15.0% |
| !! | ATTAATCAATATGGTAAATA+AGG | - | chr3_3:71036066-71036085 | None:intergenic | 15.0% |
| !!! | TTATTTACCATATTGATTAA+TGG | + | chr3_3:71036065-71036084 | Msa0469240:intron | 15.0% |
| !! | TTAATAATATTTCAAAGCTT+AGG | + | chr3_3:71038102-71038121 | Msa0469240:intron | 15.0% |
| !! | TAAATTAATAGGGTTAAAAT+TGG | - | chr3_3:71039294-71039313 | None:intergenic | 15.0% |
| !!! | GCAGTTTTTTTTTTTTTTTA+TGG | - | chr3_3:71039379-71039398 | None:intergenic | 15.0% |
| !! | CTTATTAAAAATAATGTGTT+TGG | - | chr3_3:71039783-71039802 | None:intergenic | 15.0% |
| !!! | ATTTTGATGAATTTTAATAG+AGG | - | chr3_3:71040396-71040415 | None:intergenic | 15.0% |
| !!! | TATGTCAAATTTTCAATTTT+AGG | + | chr3_3:71040463-71040482 | Msa0469240:intron | 15.0% |
| !! | CTATAATCAAAATTCAAAAC+AGG | - | chr3_3:71033856-71033875 | None:intergenic | 20.0% |
| !! | AATAAGCATAAATTAATGAG+CGG | - | chr3_3:71033997-71034016 | None:intergenic | 20.0% |
| !! | ATACATTTAAACGATTCTAA+GGG | - | chr3_3:71034238-71034257 | None:intergenic | 20.0% |
| !! | GATATAGAAAAGTGAAAATA+AGG | + | chr3_3:71034294-71034313 | Msa0469240:intron | 20.0% |
| !! | AGAAGATACTCTTTATTAAA+AGG | - | chr3_3:71034458-71034477 | None:intergenic | 20.0% |
| !!! | TGATAGAAAGGTTTTTTTAT+AGG | - | chr3_3:71034563-71034582 | None:intergenic | 20.0% |
| !!! | TTTGAAATGATTAATATTCC+TGG | - | chr3_3:71034623-71034642 | None:intergenic | 20.0% |
| !!! | CTTTTATCGAAATGTTAAAA+GGG | - | chr3_3:71034884-71034903 | None:intergenic | 20.0% |
| !! | ATCAAAAAAAAAAAAAGACC+TGG | - | chr3_3:71035098-71035117 | None:intergenic | 20.0% |
| !! | TATTCAAATATCACATTTCA+TGG | + | chr3_3:71035450-71035469 | Msa0469240:intron | 20.0% |
| !! | TATTCATCCATTAATCAATA+TGG | - | chr3_3:71036075-71036094 | None:intergenic | 20.0% |
| !! | AAATTAAAACAAGAGTAGTT+TGG | + | chr3_3:71036123-71036142 | Msa0469240:intron | 20.0% |
| !!! | AGATCATATTTTATGTTTCA+TGG | + | chr3_3:71036235-71036254 | Msa0469240:intron | 20.0% |
| !!! | ATATTTTATGTTTCATGGAT+TGG | + | chr3_3:71036240-71036259 | Msa0469240:CDS | 20.0% |
| !!! | TATTTAGTGCATCTTTAAAA+AGG | - | chr3_3:71036480-71036499 | None:intergenic | 20.0% |
| !! | TAATCATTAGATTTCAAACA+AGG | - | chr3_3:71037685-71037704 | None:intergenic | 20.0% |
| !! | ATAATAGGCTAAAAAAATGA+CGG | + | chr3_3:71037819-71037838 | Msa0469240:intron | 20.0% |
| !! | TTAGCTAAATATATTTCATG+AGG | + | chr3_3:71037878-71037897 | Msa0469240:intron | 20.0% |
| !!! | GTATTCATTGACTTAAAAAA+GGG | - | chr3_3:71038174-71038193 | None:intergenic | 20.0% |
| !!! | TGTATTCATTGACTTAAAAA+AGG | - | chr3_3:71038175-71038194 | None:intergenic | 20.0% |
| !! | TACATTCAGAAGTAAATAAA+TGG | + | chr3_3:71038191-71038210 | Msa0469240:intron | 20.0% |
| !! | TATATTTATTATCGTCAGTT+TGG | - | chr3_3:71038307-71038326 | None:intergenic | 20.0% |
| !! | AACTATAAACTTTCTTGTAT+TGG | - | chr3_3:71038366-71038385 | None:intergenic | 20.0% |
| !! | ACAACTACATATAAAAAAGT+AGG | - | chr3_3:71038484-71038503 | None:intergenic | 20.0% |
| !! | TTTCATTCAACATAATTGTT+TGG | + | chr3_3:71038668-71038687 | Msa0469240:intron | 20.0% |
| !! | AAAGAACTCTTACTATATTA+GGG | + | chr3_3:71039092-71039111 | Msa0469240:intron | 20.0% |
| !!! | TTTATTATTTGGTGTACAAT+AGG | - | chr3_3:71039488-71039507 | None:intergenic | 20.0% |
| !! | TACACCAAATAATAAATAAC+TGG | + | chr3_3:71039492-71039511 | Msa0469240:intron | 20.0% |
| !! | CTATGAATTTCAAAAATAAG+AGG | - | chr3_3:71039566-71039585 | None:intergenic | 20.0% |
| !!! | GCAATAAATATTCAAACTTT+TGG | - | chr3_3:71039663-71039682 | None:intergenic | 20.0% |
| !!! | GGTAAAATTAATTTTTGAAG+TGG | - | chr3_3:71039762-71039781 | None:intergenic | 20.0% |
| ! | CATACATTTAAACGATTCTA+AGG | - | chr3_3:71034239-71034258 | None:intergenic | 25.0% |
| !!! | TGTATGTTTTGATGTTGAAA+TGG | + | chr3_3:71034253-71034272 | Msa0469240:intron | 25.0% |
| !!! | GTATGTTTTGATGTTGAAAT+GGG | + | chr3_3:71034254-71034273 | Msa0469240:intron | 25.0% |
| ! | TACTCTTTATTAAAAGGAGA+AGG | - | chr3_3:71034452-71034471 | None:intergenic | 25.0% |
| ! | AAAAAAACCTTTCTATCAGA+AGG | + | chr3_3:71034565-71034584 | Msa0469240:intron | 25.0% |
| ! | CAAATAAATAAAACTAAGGG+AGG | + | chr3_3:71034644-71034663 | Msa0469240:intron | 25.0% |
| ! | TGGAAATTGGAAGTTATAAA+TGG | + | chr3_3:71034811-71034830 | Msa0469240:intron | 25.0% |
| !! | CCTTTTATCGAAATGTTAAA+AGG | - | chr3_3:71034885-71034904 | None:intergenic | 25.0% |
| !! | CCTTTTAACATTTCGATAAA+AGG | + | chr3_3:71034882-71034901 | Msa0469240:intron | 25.0% |
| ! | TTTAACATTTCGATAAAAGG+TGG | + | chr3_3:71034885-71034904 | Msa0469240:intron | 25.0% |
| ! | TTAACATTTCGATAAAAGGT+GGG | + | chr3_3:71034886-71034905 | Msa0469240:intron | 25.0% |
| !!! | GAGTATTGATAATATGTTCA+TGG | + | chr3_3:71035373-71035392 | Msa0469240:intron | 25.0% |
| !! | TATTGATAATATGTTCATGG+TGG | + | chr3_3:71035376-71035395 | Msa0469240:intron | 25.0% |
| !! | ATTGATAATATGTTCATGGT+GGG | + | chr3_3:71035377-71035396 | Msa0469240:intron | 25.0% |
| !!! | TTTGATTTTTCACTTTCCTT+AGG | + | chr3_3:71035509-71035528 | Msa0469240:intron | 25.0% |
| ! | TATACTTACAAAATCCTCAA+GGG | - | chr3_3:71035663-71035682 | None:intergenic | 25.0% |
| ! | ATATACTTACAAAATCCTCA+AGG | - | chr3_3:71035664-71035683 | None:intergenic | 25.0% |
| ! | CATATCAAAGAAAATACTCT+TGG | - | chr3_3:71035690-71035709 | None:intergenic | 25.0% |
| !! | TTTGCAAGTAAATTTTGTTG+GGG | - | chr3_3:71035843-71035862 | None:intergenic | 25.0% |
| !! | GTTTGCAAGTAAATTTTGTT+GGG | - | chr3_3:71035844-71035863 | None:intergenic | 25.0% |
| !! | AGTTTGCAAGTAAATTTTGT+TGG | - | chr3_3:71035845-71035864 | None:intergenic | 25.0% |
| ! | AAAGATTAAAGAAAGCAATG+TGG | + | chr3_3:71035983-71036002 | Msa0469240:intron | 25.0% |
| ! | ATACCGATCAAGTTTATTTA+CGG | - | chr3_3:71036021-71036040 | None:intergenic | 25.0% |
| ! | AGAAAAGTAATGATGATAAC+TGG | + | chr3_3:71036596-71036615 | Msa0469240:intron | 25.0% |
| ! | TTGTTGACACAAATAATTTG+TGG | - | chr3_3:71036820-71036839 | None:intergenic | 25.0% |
| !! | TACAAATTTTCAGCAGAAAT+AGG | - | chr3_3:71037171-71037190 | None:intergenic | 25.0% |
| !!! | TTGTGACTATTTTTGAACAA+AGG | + | chr3_3:71037395-71037414 | Msa0469240:CDS | 25.0% |
| !!! | TGTGACTATTTTTGAACAAA+GGG | + | chr3_3:71037396-71037415 | Msa0469240:CDS | 25.0% |
| ! | ATTTATTACCATACCTTTCT+TGG | + | chr3_3:71037447-71037466 | Msa0469240:intron | 25.0% |
| ! | TTTATTACCATACCTTTCTT+GGG | + | chr3_3:71037448-71037467 | Msa0469240:intron | 25.0% |
| ! | TCAACAAGTAAAAAGAACAA+AGG | - | chr3_3:71037501-71037520 | None:intergenic | 25.0% |
| ! | TAATTCTATTCTTCTGAATC+TGG | + | chr3_3:71037902-71037921 | Msa0469240:intron | 25.0% |
| !!! | GTACTATTTTTTGTTTCAGA+TGG | + | chr3_3:71038001-71038020 | Msa0469240:intron | 25.0% |
| ! | CATAATTGCTGATGAATTTA+CGG | - | chr3_3:71038132-71038151 | None:intergenic | 25.0% |
| !! | ACCATGCTAATTTTTATTAG+TGG | + | chr3_3:71038993-71039012 | Msa0469240:intron | 25.0% |
| !! | CCATGCTAATTTTTATTAGT+GGG | + | chr3_3:71038994-71039013 | Msa0469240:intron | 25.0% |
| !! | CATGCTAATTTTTATTAGTG+GGG | + | chr3_3:71038995-71039014 | Msa0469240:intron | 25.0% |
| ! | CAAAGAACTCTTACTATATT+AGG | + | chr3_3:71039091-71039110 | Msa0469240:intron | 25.0% |
| !!! | TTTTTTTTATGGGAAAAACG+TGG | - | chr3_3:71039368-71039387 | None:intergenic | 25.0% |
| ! | GTTCCTTAAAAAAAAAAGAG+TGG | - | chr3_3:71039401-71039420 | None:intergenic | 25.0% |
| ! | GAATTTCAAAAATAAGAGGA+AGG | - | chr3_3:71039562-71039581 | None:intergenic | 25.0% |
| !! | TTATCGGTTAAATTTCTTTG+AGG | + | chr3_3:71039601-71039620 | Msa0469240:intron | 25.0% |
| !! | AAAGTCGAAGGAAATTTTTA+TGG | + | chr3_3:71039628-71039647 | Msa0469240:intron | 25.0% |
| ! | AGATGAAAGCTGAAAAATAT+CGG | - | chr3_3:71040068-71040087 | None:intergenic | 25.0% |
| ! | TATTGGATTGTTGAACTAAA+AGG | + | chr3_3:71040093-71040112 | Msa0469240:intron | 25.0% |
| ! | AGATTCAATATGTACATGAT+GGG | - | chr3_3:71040228-71040247 | None:intergenic | 25.0% |
| ! | AAGATTCAATATGTACATGA+TGG | - | chr3_3:71040229-71040248 | None:intergenic | 25.0% |
| !! | TTTTCTTTCTTTCTCAGAAT+AGG | - | chr3_3:71040293-71040312 | None:intergenic | 25.0% |
| ! | ATATTACTTATTTGCCTACA+TGG | + | chr3_3:71040354-71040373 | Msa0469240:intron | 25.0% |
| !!! | TAATTTGTTTGATTCAGTCA+AGG | + | chr3_3:71040595-71040614 | Msa0469240:intron | 25.0% |
| ! | ATCAAATATTAACTGTGCAA+TGG | + | chr3_3:71040877-71040896 | Msa0469240:three_prime_UTR | 25.0% |
| ! | TTTCACTTTCATTATTTCAC+TGG | - | chr3_3:71040903-71040922 | None:intergenic | 25.0% |
| ! | AATCATAATTGGATCAGAAA+CGG | - | chr3_3:71040926-71040945 | None:intergenic | 25.0% |
| ! | CAAATTCAGAAATGTGTATT+TGG | + | chr3_3:71040993-71041012 | Msa0469240:three_prime_UTR | 25.0% |
| TTCTATTTAGGCGAACATTT+AGG | + | chr3_3:71034017-71034036 | Msa0469240:intron | 30.0% | |
| GACTTATTTGAACTTATCTC+TGG | - | chr3_3:71034203-71034222 | None:intergenic | 30.0% | |
| AGAAAAGTGAAAATAAGGGA+AGG | + | chr3_3:71034299-71034318 | Msa0469240:intron | 30.0% | |
| GAAAAGTGAAAATAAGGGAA+GGG | + | chr3_3:71034300-71034319 | Msa0469240:intron | 30.0% | |
| ATCTTATATTGGGACAACTT+TGG | + | chr3_3:71034367-71034386 | Msa0469240:intron | 30.0% | |
| !! | AAATGTACCAAGAGTTTTGA+AGG | + | chr3_3:71034401-71034420 | Msa0469240:intron | 30.0% |
| TGATTAATATTCCTGGTAAG+TGG | - | chr3_3:71034616-71034635 | None:intergenic | 30.0% | |
| GTTAAAAAACAGAGAACATG+TGG | + | chr3_3:71034778-71034797 | Msa0469240:intron | 30.0% | |
| TTATCGAAATGTTAAAAGGG+TGG | - | chr3_3:71034881-71034900 | None:intergenic | 30.0% | |
| TAACATTTCGATAAAAGGTG+GGG | + | chr3_3:71034887-71034906 | Msa0469240:intron | 30.0% | |
| !! | CAAGCTCTAAAAATATTCCT+AGG | - | chr3_3:71034936-71034955 | None:intergenic | 30.0% |
| ATAGTTACATCTACTTGTCT+AGG | - | chr3_3:71035063-71035082 | None:intergenic | 30.0% | |
| AGACAAGTAGATGTAACTAT+TGG | + | chr3_3:71035063-71035082 | Msa0469240:intron | 30.0% | |
| AACAAATTTGTAACTGTGTG+TGG | + | chr3_3:71035183-71035202 | Msa0469240:intron | 30.0% | |
| AAATATGAAATACCAACACC+TGG | + | chr3_3:71035254-71035273 | Msa0469240:intron | 30.0% | |
| TGAAGAGAAATACTGTTCTA+AGG | + | chr3_3:71035348-71035367 | Msa0469240:intron | 30.0% | |
| ! | TTGATAATATGTTCATGGTG+GGG | + | chr3_3:71035378-71035397 | Msa0469240:intron | 30.0% |
| TTGAATATTGATATGCGCAA+TGG | - | chr3_3:71035437-71035456 | None:intergenic | 30.0% | |
| ! | TTTTCACTTTCCTTAGGTTT+CGG | + | chr3_3:71035515-71035534 | Msa0469240:intron | 30.0% |
| AATGAAAACATAGCCATGAT+CGG | + | chr3_3:71035608-71035627 | Msa0469240:CDS | 30.0% | |
| ! | TCATCACTTGGTGATTAATT+GGG | + | chr3_3:71035733-71035752 | Msa0469240:intron | 30.0% |
| GTTGTGATAGACATACTATT+GGG | - | chr3_3:71035937-71035956 | None:intergenic | 30.0% | |
| TGTTGTGATAGACATACTAT+TGG | - | chr3_3:71035938-71035957 | None:intergenic | 30.0% | |
| TATGTCTATCACAACAACTA+TGG | + | chr3_3:71035942-71035961 | Msa0469240:intron | 30.0% | |
| AACCCGTAAATAAACTTGAT+CGG | + | chr3_3:71036015-71036034 | Msa0469240:intron | 30.0% | |
| TACCGATCAAGTTTATTTAC+GGG | - | chr3_3:71036020-71036039 | None:intergenic | 30.0% | |
| AAAAAAGCTCACATCAACAT+TGG | - | chr3_3:71036208-71036227 | None:intergenic | 30.0% | |
| AAGAATTTGAAGATCGATTG+TGG | - | chr3_3:71036277-71036296 | None:intergenic | 30.0% | |
| !!! | AACCAGTTTTAGGAATGAAA+GGG | - | chr3_3:71036371-71036390 | None:intergenic | 30.0% |
| TAAATATGACATCGCTTACA+AGG | + | chr3_3:71036494-71036513 | Msa0469240:intron | 30.0% | |
| !!! | TGTTTTAGCAATTGAGATGA+TGG | + | chr3_3:71036525-71036544 | Msa0469240:intron | 30.0% |
| ! | GACTATTTGTTTCTTAAGCT+TGG | + | chr3_3:71036632-71036651 | Msa0469240:intron | 30.0% |
| !!! | GATGACAATTCGTGTTATTT+TGG | - | chr3_3:71036685-71036704 | None:intergenic | 30.0% |
| ! | AATAATTTGTGGCTAAAGTG+AGG | - | chr3_3:71036809-71036828 | None:intergenic | 30.0% |
| GAAATTTGATTGCTTTCAGT+GGG | - | chr3_3:71036889-71036908 | None:intergenic | 30.0% | |
| AGAAATTTGATTGCTTTCAG+TGG | - | chr3_3:71036890-71036909 | None:intergenic | 30.0% | |
| CTTGACTCAATGATACATTT+AGG | + | chr3_3:71037007-71037026 | Msa0469240:intron | 30.0% | |
| ATACATTTAGGTGATAGATG+AGG | + | chr3_3:71037019-71037038 | Msa0469240:intron | 30.0% | |
| TACATTTAGGTGATAGATGA+GGG | + | chr3_3:71037020-71037039 | Msa0469240:intron | 30.0% | |
| ! | ATGCTTTTAAGCCGAAAAAA+TGG | - | chr3_3:71037055-71037074 | None:intergenic | 30.0% |
| ! | AGTACATTTGTTGAACTCTA+GGG | - | chr3_3:71037118-71037137 | None:intergenic | 30.0% |
| ! | AAGTACATTTGTTGAACTCT+AGG | - | chr3_3:71037119-71037138 | None:intergenic | 30.0% |
| GTGATTGATCACATTTAAAG+TGG | + | chr3_3:71037257-71037276 | Msa0469240:intron | 30.0% | |
| GTAGAAAGCAACACAAAATT+TGG | + | chr3_3:71037339-71037358 | Msa0469240:intron | 30.0% | |
| TGTTCAAAAATAGTCACAAG+TGG | - | chr3_3:71037394-71037413 | None:intergenic | 30.0% | |
| !!! | GTGACTATTTTTGAACAAAG+GGG | + | chr3_3:71037397-71037416 | Msa0469240:CDS | 30.0% |
| !! | TCTTTTTACTTGTTGAGCTA+AGG | + | chr3_3:71037505-71037524 | Msa0469240:intron | 30.0% |
| ATAACTGAAGAACTTAGACA+CGG | + | chr3_3:71037528-71037547 | Msa0469240:CDS | 30.0% | |
| !! | TCTTATTGATGATGTGATGA+AGG | + | chr3_3:71037720-71037739 | Msa0469240:CDS | 30.0% |
| TCTTTCAATTTCAGAGTTCT+TGG | + | chr3_3:71037955-71037974 | Msa0469240:CDS | 30.0% | |
| AATTTGTGCATGAGATATCA+TGG | - | chr3_3:71038036-71038055 | None:intergenic | 30.0% | |
| ! | AATTCACATGGGTAGAATTT+TGG | + | chr3_3:71038052-71038071 | Msa0469240:intron | 30.0% |
| AACTTTCTTGTATTGGATGT+TGG | - | chr3_3:71038359-71038378 | None:intergenic | 30.0% | |
| AAGTTTATAGTTGAGCGATA+AGG | + | chr3_3:71038374-71038393 | Msa0469240:intron | 30.0% | |
| ATTCTAATAAACTTTCCTGG+GGG | - | chr3_3:71038461-71038480 | None:intergenic | 30.0% | |
| GATTCTAATAAACTTTCCTG+GGG | - | chr3_3:71038462-71038481 | None:intergenic | 30.0% | |
| GGATTCTAATAAACTTTCCT+GGG | - | chr3_3:71038463-71038482 | None:intergenic | 30.0% | |
| AGGATTCTAATAAACTTTCC+TGG | - | chr3_3:71038464-71038483 | None:intergenic | 30.0% | |
| ACAGAAGAAAGAAATGATGT+CGG | - | chr3_3:71038507-71038526 | None:intergenic | 30.0% | |
| ! | TTTGGTTGTGAAAATTTTGC+AGG | + | chr3_3:71038686-71038705 | Msa0469240:intron | 30.0% |
| CGCATGTTTATCAGAATATA+TGG | + | chr3_3:71038830-71038849 | Msa0469240:CDS | 30.0% | |
| TTTGACATACCAACATAGAA+GGG | - | chr3_3:71038868-71038887 | None:intergenic | 30.0% | |
| !! | AAGGGTATCTAATTTACATG+TGG | + | chr3_3:71038896-71038915 | Msa0469240:intron | 30.0% |
| ! | AGGGTATCTAATTTACATGT+GGG | + | chr3_3:71038897-71038916 | Msa0469240:intron | 30.0% |
| CCCACTAATAAAAATTAGCA+TGG | - | chr3_3:71038997-71039016 | None:intergenic | 30.0% | |
| TGATAGCAATACAGTCTTTA+AGG | + | chr3_3:71039059-71039078 | Msa0469240:intron | 30.0% | |
| CAGTTATAAACATGAACATG+GGG | - | chr3_3:71039345-71039364 | None:intergenic | 30.0% | |
| GCAGTTATAAACATGAACAT+GGG | - | chr3_3:71039346-71039365 | None:intergenic | 30.0% | |
| !!! | CTGCCACTCTTTTTTTTTTA+AGG | + | chr3_3:71039395-71039414 | Msa0469240:intron | 30.0% |
| TTTCAAAAATAAGAGGAAGG+TGG | - | chr3_3:71039559-71039578 | None:intergenic | 30.0% | |
| ! | TTTGAAATTCATAGAAGCAG+AGG | + | chr3_3:71039572-71039591 | Msa0469240:intron | 30.0% |
| CAGCTTTCATCTATTCTTAT+TGG | + | chr3_3:71040076-71040095 | Msa0469240:intron | 30.0% | |
| AGTAACACTATTCTTCTTAG+AGG | + | chr3_3:71040251-71040270 | Msa0469240:intron | 30.0% | |
| TAAAACAAAGTGATCCATGT+AGG | - | chr3_3:71040371-71040390 | None:intergenic | 30.0% | |
| AAACAAATTACCTTCTTCAG+TGG | - | chr3_3:71040585-71040604 | None:intergenic | 30.0% | |
| GTTTCTGATCCAATTATGAT+TGG | + | chr3_3:71040925-71040944 | Msa0469240:three_prime_UTR | 30.0% | |
| AAGTCTTGACCAATCATAAT+TGG | - | chr3_3:71040937-71040956 | None:intergenic | 30.0% | |
| !! | GAATATTGTTTTTCTTCTGC+TGG | + | chr3_3:71041015-71041034 | Msa0469240:three_prime_UTR | 30.0% |
| TTGCACATATTTGAGAAACG+TGG | + | chr3_3:71033566-71033585 | Msa0469240:five_prime_UTR | 35.0% | |
| AAACTAGAATGGAAGAGCTA+CGG | + | chr3_3:71033611-71033630 | Msa0469240:exon | 35.0% | |
| GTTTCATTCATGGATTCTCA+CGG | + | chr3_3:71033658-71033677 | Msa0469240:CDS | 35.0% | |
| ! | GAAAGAGCATGAAATTAGCT+AGG | - | chr3_3:71033723-71033742 | None:intergenic | 35.0% |
| TGCAAATACAGTGACAGTAA+GGG | - | chr3_3:71033832-71033851 | None:intergenic | 35.0% | |
| ATGCAAATACAGTGACAGTA+AGG | - | chr3_3:71033833-71033852 | None:intergenic | 35.0% | |
| CTCTTTGGATAAACAGCTTA+TGG | + | chr3_3:71034042-71034061 | Msa0469240:intron | 35.0% | |
| ! | ATTTAAACGATTCTAAGGGC+AGG | - | chr3_3:71034234-71034253 | None:intergenic | 35.0% |
| ATACGATCCTTCAAAACTCT+TGG | - | chr3_3:71034411-71034430 | None:intergenic | 35.0% | |
| AAAGGAGAAGGAGAAAATGA+GGG | - | chr3_3:71034440-71034459 | None:intergenic | 35.0% | |
| AAAAGGAGAAGGAGAAAATG+AGG | - | chr3_3:71034441-71034460 | None:intergenic | 35.0% | |
| AGTAAGTTGTGTTAGTAGTC+AGG | - | chr3_3:71034518-71034537 | None:intergenic | 35.0% | |
| AAAACCTTTCTATCAGAAGG+AGG | + | chr3_3:71034568-71034587 | Msa0469240:intron | 35.0% | |
| ATCCATAGGTTCTTATTCTC+AGG | + | chr3_3:71034675-71034694 | Msa0469240:intron | 35.0% | |
| TTCCTGAGAATAAGAACCTA+TGG | - | chr3_3:71034680-71034699 | None:intergenic | 35.0% | |
| !! | GCTCTAAAAATATTCCTAGG+TGG | - | chr3_3:71034933-71034952 | None:intergenic | 35.0% |
| ! | TTGTCTAGGATATTGTGGAA+TGG | - | chr3_3:71035049-71035068 | None:intergenic | 35.0% |
| ! | TCTACTTGTCTAGGATATTG+TGG | - | chr3_3:71035054-71035073 | None:intergenic | 35.0% |
| CAAGTAGATGTAACTATTGG+AGG | + | chr3_3:71035066-71035085 | Msa0469240:intron | 35.0% | |
| !! | AACTATTGGAGGTATTATCC+AGG | + | chr3_3:71035077-71035096 | Msa0469240:intron | 35.0% |
| AAATTTGTAACTGTGTGTGG+TGG | + | chr3_3:71035186-71035205 | Msa0469240:intron | 35.0% | |
| AATTTGTAACTGTGTGTGGT+GGG | + | chr3_3:71035187-71035206 | Msa0469240:intron | 35.0% | |
| AATAACCAATTATGCATGCC+AGG | - | chr3_3:71035275-71035294 | None:intergenic | 35.0% | |
| !! | AGAGAAATACTGTTCTAAGG+AGG | + | chr3_3:71035351-71035370 | Msa0469240:intron | 35.0% |
| TGATAATATGTTCATGGTGG+GGG | + | chr3_3:71035379-71035398 | Msa0469240:intron | 35.0% | |
| ! | AAGATTTTGTCCGAAACCTA+AGG | - | chr3_3:71035528-71035547 | None:intergenic | 35.0% |
| ATGAAAACATAGCCATGATC+GGG | + | chr3_3:71035609-71035628 | Msa0469240:CDS | 35.0% | |
| ! | CTCATCACTTGGTGATTAAT+TGG | + | chr3_3:71035732-71035751 | Msa0469240:intron | 35.0% |
| GTAAATAAGGGAGTTAGACA+GGG | - | chr3_3:71036053-71036072 | None:intergenic | 35.0% | |
| AACAAGAGTAGTTTGGTAGA+AGG | + | chr3_3:71036130-71036149 | Msa0469240:intron | 35.0% | |
| CTCTCTGTGAATGAAAGAAT+AGG | - | chr3_3:71036301-71036320 | None:intergenic | 35.0% | |
| CACAGAGAGCTATATTTATC+AGG | + | chr3_3:71036312-71036331 | Msa0469240:CDS | 35.0% | |
| TTATCAGGTACATGCTAGAT+TGG | + | chr3_3:71036327-71036346 | Msa0469240:intron | 35.0% | |
| !!! | GAACCAGTTTTAGGAATGAA+AGG | - | chr3_3:71036372-71036391 | None:intergenic | 35.0% |
| ! | CATACAGTAGAACCAGTTTT+AGG | - | chr3_3:71036381-71036400 | None:intergenic | 35.0% |
| CAAGGCAAGTTTAAGAAACT+AGG | + | chr3_3:71036451-71036470 | Msa0469240:intron | 35.0% | |
| !!! | ATTCGTGTTATTTTGGCAGT+TGG | - | chr3_3:71036678-71036697 | None:intergenic | 35.0% |
| CATTGTGCAAAAACTGTTCA+GGG | - | chr3_3:71036707-71036726 | None:intergenic | 35.0% | |
| ACATTGTGCAAAAACTGTTC+AGG | - | chr3_3:71036708-71036727 | None:intergenic | 35.0% | |
| AGCAAACACATATTGGTGAA+GGG | - | chr3_3:71036746-71036765 | None:intergenic | 35.0% | |
| ACTCATCTCAGAAAAGTCAA+AGG | + | chr3_3:71036840-71036859 | Msa0469240:intron | 35.0% | |
| TAGAAATGTGAGTGTCTTGA+TGG | - | chr3_3:71036925-71036944 | None:intergenic | 35.0% | |
| TGTTTCAGAGTGTGATTACT+TGG | + | chr3_3:71036959-71036978 | Msa0469240:intron | 35.0% | |
| TCTCACCTCAACAAACTAAA+AGG | - | chr3_3:71036985-71037004 | None:intergenic | 35.0% | |
| !! | AAGTCAGGTTGAGCTTAATT+TGG | + | chr3_3:71037474-71037493 | Msa0469240:intron | 35.0% |
| TAACTGAAGAACTTAGACAC+GGG | + | chr3_3:71037529-71037548 | Msa0469240:CDS | 35.0% | |
| ATGACAGAGCTTTCTTTCAA+GGG | - | chr3_3:71037568-71037587 | None:intergenic | 35.0% | |
| TCAAACAAGGAACATTGAGA+AGG | - | chr3_3:71037672-71037691 | None:intergenic | 35.0% | |
| AGCTAAGGTACACGAATAAT+AGG | + | chr3_3:71037804-71037823 | Msa0469240:intron | 35.0% | |
| ! | TTCTTCTGAATCTGGTTTGA+AGG | + | chr3_3:71037910-71037929 | Msa0469240:intron | 35.0% |
| TTCAATTTCAGAGTTCTTGG+TGG | + | chr3_3:71037958-71037977 | Msa0469240:CDS | 35.0% | |
| ATCTCATGCACAAATTCACA+TGG | + | chr3_3:71038040-71038059 | Msa0469240:intron | 35.0% | |
| TCTCATGCACAAATTCACAT+GGG | + | chr3_3:71038041-71038060 | Msa0469240:intron | 35.0% | |
| !!! | TTTTGGAGTTGCTTCTATCA+TGG | + | chr3_3:71038069-71038088 | Msa0469240:intron | 35.0% |
| TTTATAGTTGAGCGATAAGG+TGG | + | chr3_3:71038377-71038396 | Msa0469240:intron | 35.0% | |
| ! | ATTTTGCAGGTATGACTATG+AGG | + | chr3_3:71038699-71038718 | Msa0469240:intron | 35.0% |
| TTGACATACCAACATAGAAG+GGG | - | chr3_3:71038867-71038886 | None:intergenic | 35.0% | |
| GTTTGACATACCAACATAGA+AGG | - | chr3_3:71038869-71038888 | None:intergenic | 35.0% | |
| TCTATGTTGGTATGTCAAAC+TGG | + | chr3_3:71038869-71038888 | Msa0469240:intron | 35.0% | |
| CATGTTCTCTCTAAATCTGT+TGG | + | chr3_3:71038926-71038945 | Msa0469240:intron | 35.0% | |
| TACTATATTAGGGCTGTGTT+TGG | + | chr3_3:71039102-71039121 | Msa0469240:intron | 35.0% | |
| ! | AAAGCTAGCTTATAGCTTCT+TGG | + | chr3_3:71039134-71039153 | Msa0469240:intron | 35.0% |
| !! | GGATTAGCTTATAAGCTTGT+TGG | + | chr3_3:71039155-71039174 | Msa0469240:intron | 35.0% |
| GGCAGTTATAAACATGAACA+TGG | - | chr3_3:71039347-71039366 | None:intergenic | 35.0% | |
| CGGGCCAGTTATTTATTATT+TGG | - | chr3_3:71039499-71039518 | None:intergenic | 35.0% | |
| GAAGCAGAGGTCAAAATTAT+CGG | + | chr3_3:71039585-71039604 | Msa0469240:intron | 35.0% | |
| ! | CTTTGAGGATTAAAAGTCGA+AGG | + | chr3_3:71039616-71039635 | Msa0469240:intron | 35.0% |
| TTCGATGAAAAATCTCACAC+CGG | - | chr3_3:71039944-71039963 | None:intergenic | 35.0% | |
| !! | TCAATATGTACATGATGGGT+GGG | - | chr3_3:71040224-71040243 | None:intergenic | 35.0% |
| ! | TTCAATATGTACATGATGGG+TGG | - | chr3_3:71040225-71040244 | None:intergenic | 35.0% |
| AAATACTTGATCTGTGTCAG+AGG | + | chr3_3:71040768-71040787 | Msa0469240:exon | 35.0% | |
| ! | TGTTTCCATTTCAAGTGTCT+TGG | + | chr3_3:71040809-71040828 | Msa0469240:three_prime_UTR | 35.0% |
| GTGTGAGGGTTAAACTAGAA+TGG | + | chr3_3:71033600-71033619 | Msa0469240:exon | 40.0% | |
| ACAACGCATGGTTTCATTCA+TGG | + | chr3_3:71033648-71033667 | Msa0469240:CDS | 40.0% | |
| GCATGAAATTAGCTAGGAAG+CGG | - | chr3_3:71033717-71033736 | None:intergenic | 40.0% | |
| CTCTTTCTGTTAGAACCTTG+CGG | + | chr3_3:71033736-71033755 | Msa0469240:CDS | 40.0% | |
| TAATTTCCGAGCTTATGCCT+AGG | + | chr3_3:71033788-71033807 | Msa0469240:CDS | 40.0% | |
| AATTTCCGAGCTTATGCCTA+GGG | + | chr3_3:71033789-71033808 | Msa0469240:CDS | 40.0% | |
| ! | GATTTCTTCTCCGTTTGTTG+AGG | + | chr3_3:71033908-71033927 | Msa0469240:intron | 40.0% |
| TGATACGCATCCTCAACAAA+CGG | - | chr3_3:71033921-71033940 | None:intergenic | 40.0% | |
| GTTGCAGAACAAGAGAGTAA+TGG | + | chr3_3:71033948-71033967 | Msa0469240:CDS | 40.0% | |
| GGATAAACAGCTTATGGCTT+AGG | + | chr3_3:71034048-71034067 | Msa0469240:intron | 40.0% | |
| AGTTCCTCCTTCTGATAGAA+AGG | - | chr3_3:71034575-71034594 | None:intergenic | 40.0% | |
| TGATGTAATCACCACTTACC+AGG | + | chr3_3:71034602-71034621 | Msa0469240:intron | 40.0% | |
| AGAGAACATGTGGTAGAATG+AGG | + | chr3_3:71034788-71034807 | Msa0469240:intron | 40.0% | |
| TGGTAGAATGAGGTGGAAAT+TGG | + | chr3_3:71034798-71034817 | Msa0469240:intron | 40.0% | |
| GATAAAAGGTGGGGAAACAT+GGG | + | chr3_3:71034896-71034915 | Msa0469240:intron | 40.0% | |
| GGGTAAAATACAATCCACCT+AGG | + | chr3_3:71034916-71034935 | Msa0469240:intron | 40.0% | |
| ! | ATATTGTGGAATGGTGGAGA+GGG | - | chr3_3:71035040-71035059 | None:intergenic | 40.0% |
| ! | TCTAGGATATTGTGGAATGG+TGG | - | chr3_3:71035046-71035065 | None:intergenic | 40.0% |
| ! | CTTTTCAGTTCCAGGAAGTT+GGG | - | chr3_3:71035152-71035171 | None:intergenic | 40.0% |
| ! | TCTTTTCAGTTCCAGGAAGT+TGG | - | chr3_3:71035153-71035172 | None:intergenic | 40.0% |
| ! | CCTACTATCTTTTCAGTTCC+AGG | - | chr3_3:71035160-71035179 | None:intergenic | 40.0% |
| CCTGGAACTGAAAAGATAGT+AGG | + | chr3_3:71035157-71035176 | Msa0469240:intron | 40.0% | |
| ATTTGTAACTGTGTGTGGTG+GGG | + | chr3_3:71035188-71035207 | Msa0469240:intron | 40.0% | |
| ATGGTAAAGACAGCAGTGAA+CGG | - | chr3_3:71035418-71035437 | None:intergenic | 40.0% | |
| GGTTTCGGACAAAATCTTGT+TGG | + | chr3_3:71035530-71035549 | Msa0469240:intron | 40.0% | |
| ! | GGTAGAATTTGCCTTTTGCA+TGG | - | chr3_3:71035642-71035661 | None:intergenic | 40.0% |
| AAAGGCAAATTCTACCCTTG+AGG | + | chr3_3:71035646-71035665 | Msa0469240:CDS | 40.0% | |
| CTGCTACAATACTCATCACT+TGG | + | chr3_3:71035721-71035740 | Msa0469240:intron | 40.0% | |
| AGTCTGTGACAGCCTAAAAA+TGG | + | chr3_3:71035790-71035809 | Msa0469240:intron | 40.0% | |
| TGTGACAGCCTAAAAATGGT+TGG | + | chr3_3:71035794-71035813 | Msa0469240:intron | 40.0% | |
| !! | CACTGTGACCAACCATTTTT+AGG | - | chr3_3:71035805-71035824 | None:intergenic | 40.0% |
| ! | CTAAAAATGGTTGGTCACAG+TGG | + | chr3_3:71035803-71035822 | Msa0469240:intron | 40.0% |
| ACCTACAGTTATCTTTCTCG+CGG | + | chr3_3:71035877-71035896 | Msa0469240:intron | 40.0% | |
| ACATACTATTGGGTCGAAGA+CGG | - | chr3_3:71035927-71035946 | None:intergenic | 40.0% | |
| GTCTATCACAACAACTATGG+TGG | + | chr3_3:71035945-71035964 | Msa0469240:intron | 40.0% | |
| GGTAAATAAGGGAGTTAGAC+AGG | - | chr3_3:71036054-71036073 | None:intergenic | 40.0% | |
| TCTGTAGAAAGAAGCAAGCA+AGG | - | chr3_3:71036103-71036122 | None:intergenic | 40.0% | |
| CAACATTGGAATCACAAAGC+AGG | - | chr3_3:71036194-71036213 | None:intergenic | 40.0% | |
| GACCCTTTCATTCCTAAAAC+TGG | + | chr3_3:71036366-71036385 | Msa0469240:intron | 40.0% | |
| CTACTGTATGTGTGTCTAGA+AGG | + | chr3_3:71036391-71036410 | Msa0469240:intron | 40.0% | |
| TGTACCTCAAGCTAGATTGA+AGG | + | chr3_3:71036428-71036447 | Msa0469240:intron | 40.0% | |
| CAGCAAACACATATTGGTGA+AGG | - | chr3_3:71036747-71036766 | None:intergenic | 40.0% | |
| CTTCACCAATATGTGTTTGC+TGG | + | chr3_3:71036745-71036764 | Msa0469240:intron | 40.0% | |
| AAGCACCAGCAAACACATAT+TGG | - | chr3_3:71036753-71036772 | None:intergenic | 40.0% | |
| ATTTGTGGCTAAAGTGAGGT+CGG | - | chr3_3:71036805-71036824 | None:intergenic | 40.0% | |
| TTGCTTTCAGTGGGAAATGT+GGG | - | chr3_3:71036880-71036899 | None:intergenic | 40.0% | |
| ATTGCTTTCAGTGGGAAATG+TGG | - | chr3_3:71036881-71036900 | None:intergenic | 40.0% | |
| !!! | CTTGGCCTTTTAGTTTGTTG+AGG | + | chr3_3:71036977-71036996 | Msa0469240:intron | 40.0% |
| ATTTAGGTGATAGATGAGGG+TGG | + | chr3_3:71037023-71037042 | Msa0469240:intron | 40.0% | |
| TGTAGCTGTTATCATGCAGT+TGG | + | chr3_3:71037187-71037206 | Msa0469240:intron | 40.0% | |
| ! | ATTTGCTGCAAACACCAACA+AGG | + | chr3_3:71037225-71037244 | Msa0469240:CDS | 40.0% |
| AACACCAACAAGGAAAGATG+AGG | + | chr3_3:71037235-71037254 | Msa0469240:CDS | 40.0% | |
| ATCACCTCATCTTTCCTTGT+TGG | - | chr3_3:71037242-71037261 | None:intergenic | 40.0% | |
| TAGTCACAAGTGGTCCAAAT+GGG | - | chr3_3:71037384-71037403 | None:intergenic | 40.0% | |
| ATAGTCACAAGTGGTCCAAA+TGG | - | chr3_3:71037385-71037404 | None:intergenic | 40.0% | |
| !! | AAAGGGGTCTTTTGACTGAA+AGG | + | chr3_3:71037413-71037432 | Msa0469240:CDS | 40.0% |
| ACTTACTCCCAAGAAAGGTA+TGG | - | chr3_3:71037458-71037477 | None:intergenic | 40.0% | |
| AACTGAAGAACTTAGACACG+GGG | + | chr3_3:71037530-71037549 | Msa0469240:CDS | 40.0% | |
| CATGACAGAGCTTTCTTTCA+AGG | - | chr3_3:71037569-71037588 | None:intergenic | 40.0% | |
| ! | TGCACTGATAAACGAAGAAG+AGG | + | chr3_3:71037587-71037606 | Msa0469240:CDS | 40.0% |
| CTTCTTCTCTATCAACTGCA+AGG | + | chr3_3:71037781-71037800 | Msa0469240:CDS | 40.0% | |
| AAACTCCATATGCAACTCCT+CGG | - | chr3_3:71037936-71037955 | None:intergenic | 40.0% | |
| ! | AAAGCTGTGCTTTCTGCTTT+TGG | + | chr3_3:71038264-71038283 | Msa0469240:intron | 40.0% |
| !! | TCAGACAACATTTTGACAGC+TGG | - | chr3_3:71038747-71038766 | None:intergenic | 40.0% |
| TTGACTAAAAGCTGTTCTGC+AGG | + | chr3_3:71038775-71038794 | Msa0469240:intron | 40.0% | |
| GTATGTCAAACTGGCTACAA+GGG | + | chr3_3:71038878-71038897 | Msa0469240:intron | 40.0% | |
| TTGGTCAGCTGGTATATTTC+TGG | + | chr3_3:71038945-71038964 | Msa0469240:intron | 40.0% | |
| !! | AAGCTTGTTGGTTGAAAACG+TGG | + | chr3_3:71039167-71039186 | Msa0469240:intron | 40.0% |
| ! | GTAGCTTTTGAGCTTATAGC+TGG | + | chr3_3:71039249-71039268 | Msa0469240:intron | 40.0% |
| ! | TTCAATAGTGGGAACTACCA+GGG | - | chr3_3:71039899-71039918 | None:intergenic | 40.0% |
| ! | ATTCAATAGTGGGAACTACC+AGG | - | chr3_3:71039900-71039919 | None:intergenic | 40.0% |
| TGGTAGTTCCCACTATTGAA+TGG | + | chr3_3:71039899-71039918 | Msa0469240:intron | 40.0% | |
| GGTAGTTCCCACTATTGAAT+GGG | + | chr3_3:71039900-71039919 | Msa0469240:intron | 40.0% | |
| GATTTGGCCCATTCAATAGT+GGG | - | chr3_3:71039910-71039929 | None:intergenic | 40.0% | |
| ! | TGATTTGGCCCATTCAATAG+TGG | - | chr3_3:71039911-71039930 | None:intergenic | 40.0% |
| GCCAAATCATTTAGTGAGAC+CGG | + | chr3_3:71039922-71039941 | Msa0469240:intron | 40.0% | |
| ACCGGTCTCACTAAATGATT+TGG | - | chr3_3:71039926-71039945 | None:intergenic | 40.0% | |
| !! | CAATATGTACATGATGGGTG+GGG | - | chr3_3:71040223-71040242 | None:intergenic | 40.0% |
| CTATTCTTCTTAGAGGTCTC+TGG | + | chr3_3:71040258-71040277 | Msa0469240:intron | 40.0% | |
| TTAGGCAAAGTGCATTACTG+AGG | + | chr3_3:71040481-71040500 | Msa0469240:intron | 40.0% | |
| AAGCAAGTACACAAGTCTAC+TGG | + | chr3_3:71040508-71040527 | Msa0469240:CDS | 40.0% | |
| CACAAGTCTACTGGAATTAC+TGG | + | chr3_3:71040517-71040536 | Msa0469240:CDS | 40.0% | |
| TGGTAGCTCAGAGATAACTT+TGG | - | chr3_3:71040545-71040564 | None:intergenic | 40.0% | |
| ATTACCTTCTTCAGTGGCTT+CGG | - | chr3_3:71040579-71040598 | None:intergenic | 40.0% | |
| TCCAACTGTGATTCAAGATG+AGG | + | chr3_3:71040709-71040728 | Msa0469240:CDS | 40.0% | |
| TCCTCATCTTGAATCACAGT+TGG | - | chr3_3:71040713-71040732 | None:intergenic | 40.0% | |
| TATGGCCAAGACACTTGAAA+TGG | - | chr3_3:71040817-71040836 | None:intergenic | 40.0% | |
| TAGATTGCGAAGACTAGGAA+TGG | + | chr3_3:71041078-71041097 | Msa0469240:three_prime_UTR | 40.0% | |
| AATGGAAGAGCTACGGAAAC+TGG | + | chr3_3:71033618-71033637 | Msa0469240:exon | 45.0% | |
| GAAGCGGTTACAGTGATGAT+CGG | - | chr3_3:71033701-71033720 | None:intergenic | 45.0% | |
| TAAGCAGCATTTGTCGTCGA+TGG | - | chr3_3:71033770-71033789 | None:intergenic | 45.0% | |
| ATACAGTGACAGTAAGGGAG+TGG | - | chr3_3:71033827-71033846 | None:intergenic | 45.0% | |
| GCGAACATTTAGGCTCTCTT+TGG | + | chr3_3:71034027-71034046 | Msa0469240:intron | 45.0% | |
| AACCACTTGAGCTACACCTT+GGG | - | chr3_3:71034486-71034505 | None:intergenic | 45.0% | |
| GTAGCTCAAGTGGTTGAACT+TGG | + | chr3_3:71034491-71034510 | Msa0469240:intron | 45.0% | |
| GGGAGGTTGTTCAAATCCAT+AGG | + | chr3_3:71034661-71034680 | Msa0469240:intron | 45.0% | |
| GAACATGTGGTAGAATGAGG+TGG | + | chr3_3:71034791-71034810 | Msa0469240:intron | 45.0% | |
| CGATAAAAGGTGGGGAAACA+TGG | + | chr3_3:71034895-71034914 | Msa0469240:intron | 45.0% | |
| ! | GATATTGTGGAATGGTGGAG+AGG | - | chr3_3:71035041-71035060 | None:intergenic | 45.0% |
| TTCTATCTCTCCCAACTTCC+TGG | + | chr3_3:71035139-71035158 | Msa0469240:intron | 45.0% | |
| TTTGTAACTGTGTGTGGTGG+GGG | + | chr3_3:71035189-71035208 | Msa0469240:intron | 45.0% | |
| CAATTATGCATGCCAGGTGT+TGG | - | chr3_3:71035269-71035288 | None:intergenic | 45.0% | |
| CAACACCTGGCATGCATAAT+TGG | + | chr3_3:71035267-71035286 | Msa0469240:intron | 45.0% | |
| ! | TAATATGTTCATGGTGGGGG+CGG | + | chr3_3:71035382-71035401 | Msa0469240:intron | 45.0% |
| TCCGCGAGAAAGATAACTGT+AGG | - | chr3_3:71035881-71035900 | None:intergenic | 45.0% | |
| TACAGTTATCTTTCTCGCGG+AGG | + | chr3_3:71035880-71035899 | Msa0469240:intron | 45.0% | |
| ACAGTTATCTTTCTCGCGGA+GGG | + | chr3_3:71035881-71035900 | Msa0469240:intron | 45.0% | |
| ! | TCACAACAACTATGGTGGTG+AGG | + | chr3_3:71035950-71035969 | Msa0469240:intron | 45.0% |
| GGAGTTAGACAGGGATTCTT+AGG | - | chr3_3:71036044-71036063 | None:intergenic | 45.0% | |
| ATCACAAAGCAGGTTTCAGG+TGG | - | chr3_3:71036184-71036203 | None:intergenic | 45.0% | |
| GGAATCACAAAGCAGGTTTC+AGG | - | chr3_3:71036187-71036206 | None:intergenic | 45.0% | |
| ! | CTTGCCTTCAATCTAGCTTG+AGG | - | chr3_3:71036435-71036454 | None:intergenic | 45.0% |
| CTCAAGCTAGATTGAAGGCA+AGG | + | chr3_3:71036433-71036452 | Msa0469240:intron | 45.0% | |
| TCTTAAGCTTGGCCTGTGTA+AGG | + | chr3_3:71036643-71036662 | Msa0469240:intron | 45.0% | |
| TGGAGTTATGCTCCTTACAC+AGG | - | chr3_3:71036658-71036677 | None:intergenic | 45.0% | |
| TGGTGCTTGATGTTTGTCCT+GGG | + | chr3_3:71036765-71036784 | Msa0469240:intron | 45.0% | |
| ! | AAATGTGGGCTGAGTTCACT+TGG | - | chr3_3:71036866-71036885 | None:intergenic | 45.0% |
| TGTTTCTCGACTGACCCATT+TGG | + | chr3_3:71037367-71037386 | Msa0469240:CDS | 45.0% | |
| ACCTTTCTTGGGAGTAAGTC+AGG | + | chr3_3:71037459-71037478 | Msa0469240:intron | 45.0% | |
| ACCTGACTTACTCCCAAGAA+AGG | - | chr3_3:71037463-71037482 | None:intergenic | 45.0% | |
| ! | TTAGACACGGGGAAGAGTAT+TGG | + | chr3_3:71037541-71037560 | Msa0469240:CDS | 45.0% |
| !! | TAGACACGGGGAAGAGTATT+GGG | + | chr3_3:71037542-71037561 | Msa0469240:CDS | 45.0% |
| CTATCAACTGCAAGGAGCTA+AGG | + | chr3_3:71037789-71037808 | Msa0469240:CDS | 45.0% | |
| AGTTGAGCGATAAGGTGGTT+TGG | + | chr3_3:71038382-71038401 | Msa0469240:intron | 45.0% | |
| TTTGGTTGTGGAAGAGAGGT+TGG | + | chr3_3:71038400-71038419 | Msa0469240:intron | 45.0% | |
| GAAGAGAGGTTGGAGTGATA+TGG | + | chr3_3:71038410-71038429 | Msa0469240:intron | 45.0% | |
| !! | GACAACATTTTGACAGCTGG+TGG | - | chr3_3:71038744-71038763 | None:intergenic | 45.0% |
| TTCAACTGCCCCTTCTATGT+TGG | + | chr3_3:71038856-71038875 | Msa0469240:CDS | 45.0% | |
| GGTATGTCAAACTGGCTACA+AGG | + | chr3_3:71038877-71038896 | Msa0469240:intron | 45.0% | |
| CTCTAAATCTGTTGGTCAGC+TGG | + | chr3_3:71038934-71038953 | Msa0469240:intron | 45.0% | |
| GGTTGAAAACGTGGTGTGTT+TGG | + | chr3_3:71039176-71039195 | Msa0469240:intron | 45.0% | |
| ! | GGGAAAATCATGGCTCTGTT+TGG | - | chr3_3:71039879-71039898 | None:intergenic | 45.0% |
| ! | AACAGAGCCATGATTTTCCC+TGG | + | chr3_3:71039879-71039898 | Msa0469240:intron | 45.0% |
| GGAACTACCAGGGAAAATCA+TGG | - | chr3_3:71039889-71039908 | None:intergenic | 45.0% | |
| TGTACTCCACCAAATTCTGC+AGG | + | chr3_3:71040647-71040666 | Msa0469240:intron | 45.0% | |
| TTTCCACCTGCAGAATTTGG+TGG | - | chr3_3:71040656-71040675 | None:intergenic | 45.0% | |
| ACCAAATTCTGCAGGTGGAA+AGG | + | chr3_3:71040655-71040674 | Msa0469240:intron | 45.0% | |
| ACCTTTCCACCTGCAGAATT+TGG | - | chr3_3:71040659-71040678 | None:intergenic | 45.0% | |
| GAATACACCACGTACCAAGA+GGG | - | chr3_3:71040691-71040710 | None:intergenic | 45.0% | |
| TAGAGGGCTGGAGTTGAATT+CGG | + | chr3_3:71040846-71040865 | Msa0469240:three_prime_UTR | 45.0% | |
| ! | CCTAGTCTTCGCAATCTACA+TGG | - | chr3_3:71041076-71041095 | None:intergenic | 45.0% |
| CCATGTAGATTGCGAAGACT+AGG | + | chr3_3:71041073-71041092 | Msa0469240:three_prime_UTR | 45.0% | |
| !! | TAAAAAAAAAAATTTAAATC+AGG | - | chr3_3:71035298-71035317 | None:intergenic | 5.0% |
| !!! | TGATTTAAATTTTTTTTTTT+AGG | + | chr3_3:71035297-71035316 | Msa0469240:intron | 5.0% |
| !!! | GATTTAAATTTTTTTTTTTA+GGG | + | chr3_3:71035298-71035317 | Msa0469240:intron | 5.0% |
| !! | TTGAAATATTATTAAAAAAT+AGG | - | chr3_3:71038097-71038116 | None:intergenic | 5.0% |
| AGAGCTACGGAAACTGGAGA+AGG | + | chr3_3:71033624-71033643 | Msa0469240:CDS | 50.0% | |
| ! | ACTGGAGAAGGTACAACGCA+TGG | + | chr3_3:71033636-71033655 | Msa0469240:CDS | 50.0% |
| ACTGACCCTAGGCATAAGCT+CGG | - | chr3_3:71033797-71033816 | None:intergenic | 50.0% | |
| GTGGTGAAGTTACTGACCCT+AGG | - | chr3_3:71033808-71033827 | None:intergenic | 50.0% | |
| ! | AACGATTCTAAGGGCAGGCT+TGG | - | chr3_3:71034229-71034248 | None:intergenic | 50.0% |
| GAGTATCTTCTAGTCCCCCA+AGG | + | chr3_3:71034467-71034486 | Msa0469240:intron | 50.0% | |
| ACCACTTGAGCTACACCTTG+GGG | - | chr3_3:71034485-71034504 | None:intergenic | 50.0% | |
| CAACCACTTGAGCTACACCT+TGG | - | chr3_3:71034487-71034506 | None:intergenic | 50.0% | |
| ! | AATATGTTCATGGTGGGGGC+GGG | + | chr3_3:71035383-71035402 | Msa0469240:intron | 50.0% |
| AAACATAGCCATGATCGGGC+TGG | + | chr3_3:71035613-71035632 | Msa0469240:CDS | 50.0% | |
| ! | ATGGTTGGTCACAGTGGATG+TGG | + | chr3_3:71035809-71035828 | Msa0469240:intron | 50.0% |
| ! | TGGTTGGTCACAGTGGATGT+GGG | + | chr3_3:71035810-71035829 | Msa0469240:intron | 50.0% |
| CAGTTATCTTTCTCGCGGAG+GGG | + | chr3_3:71035882-71035901 | Msa0469240:intron | 50.0% | |
| AGTTATCTTTCTCGCGGAGG+GGG | + | chr3_3:71035883-71035902 | Msa0469240:intron | 50.0% | |
| TACTATTGGGTCGAAGACGG+TGG | - | chr3_3:71035924-71035943 | None:intergenic | 50.0% | |
| ! | AAAGCAGGTTTCAGGTGGCT+TGG | - | chr3_3:71036179-71036198 | None:intergenic | 50.0% |
| CTGGTGCTTGATGTTTGTCC+TGG | + | chr3_3:71036764-71036783 | Msa0469240:intron | 50.0% | |
| TGCTTGATGTTTGTCCTGGG+TGG | + | chr3_3:71036768-71036787 | Msa0469240:intron | 50.0% | |
| TTGATGTTTGTCCTGGGTGG+TGG | + | chr3_3:71036771-71036790 | Msa0469240:intron | 50.0% | |
| ! | TGAATCTGGTTTGAAGGCCG+AGG | + | chr3_3:71037916-71037935 | Msa0469240:intron | 50.0% |
| !! | GCGATAAGGTGGTTTGGTTG+TGG | + | chr3_3:71038388-71038407 | Msa0469240:intron | 50.0% |
| !! | GTGGTTTGGTTGTGGAAGAG+AGG | + | chr3_3:71038396-71038415 | Msa0469240:intron | 50.0% |
| GAGAGGTTGGAGTGATATGG+AGG | + | chr3_3:71038413-71038432 | Msa0469240:intron | 50.0% | |
| TGGAGTGATATGGAGGTCAC+AGG | + | chr3_3:71038420-71038439 | Msa0469240:intron | 50.0% | |
| !! | TATGTACATGATGGGTGGGG+TGG | - | chr3_3:71040220-71040239 | None:intergenic | 50.0% |
| ! | TGGCTTCGGCACATCTTTTC+TGG | - | chr3_3:71040565-71040584 | None:intergenic | 50.0% |
| ACTCCACCAAATTCTGCAGG+TGG | + | chr3_3:71040650-71040669 | Msa0469240:intron | 50.0% | |
| ! | AAGGTATCAGAGCACCCTCT+TGG | + | chr3_3:71040674-71040693 | Msa0469240:CDS | 50.0% |
| GGAATACACCACGTACCAAG+AGG | - | chr3_3:71040692-71040711 | None:intergenic | 50.0% | |
| TGGCCATATGCCGATGATAG+AGG | + | chr3_3:71040829-71040848 | Msa0469240:three_prime_UTR | 50.0% | |
| GGCCATATGCCGATGATAGA+GGG | + | chr3_3:71040830-71040849 | Msa0469240:three_prime_UTR | 50.0% | |
| AGCCCTCTATCATCGGCATA+TGG | - | chr3_3:71040835-71040854 | None:intergenic | 50.0% | |
| ATATGCCGATGATAGAGGGC+TGG | + | chr3_3:71040834-71040853 | Msa0469240:three_prime_UTR | 50.0% | |
| CAACTCCAGCCCTCTATCAT+CGG | - | chr3_3:71040842-71040861 | None:intergenic | 50.0% | |
| TTTGAGAAACGTGGTCGCGC+TGG | + | chr3_3:71033575-71033594 | Msa0469240:five_prime_UTR | 55.0% | |
| AGCATTTGTCGTCGATGGCG+AGG | - | chr3_3:71033765-71033784 | None:intergenic | 55.0% | |
| CCACTTGAGCTACACCTTGG+GGG | - | chr3_3:71034484-71034503 | None:intergenic | 55.0% | |
| CATGGAATCCAGCCCGATCA+TGG | - | chr3_3:71035624-71035643 | None:intergenic | 55.0% | |
| ! | CGGGCTGGATTCCATGCAAA+AGG | + | chr3_3:71035628-71035647 | Msa0469240:CDS | 55.0% |
| ! | ATGTTTGTCCTGGGTGGTGG+TGG | + | chr3_3:71036774-71036793 | Msa0469240:intron | 55.0% |
| GTGATAGATGAGGGTGGCGT+GGG | + | chr3_3:71037029-71037048 | Msa0469240:intron | 55.0% | |
| !!! | GGTGGCGTGGGCCATTTTTT+CGG | + | chr3_3:71037041-71037060 | Msa0469240:intron | 55.0% |
| GAAGGCCGAGGAGTTGCATA+TGG | + | chr3_3:71037928-71037947 | Msa0469240:intron | 55.0% | |
| TCCAACTCTTCAACTCCCCC+AGG | + | chr3_3:71038443-71038462 | Msa0469240:intron | 55.0% | |
| TCCTGGGGGAGTTGAAGAGT+TGG | - | chr3_3:71038447-71038466 | None:intergenic | 55.0% | |
| TGTGCCGAAGCCACTGAAGA+AGG | + | chr3_3:71040572-71040591 | Msa0469240:CDS | 55.0% | |
| !! | TGGTCGCGCTGGTTGTGTGA+GGG | + | chr3_3:71033586-71033605 | Msa0469240:five_prime_UTR | 60.0% |
| CCCCCAAGGTGTAGCTCAAG+TGG | + | chr3_3:71034481-71034500 | Msa0469240:intron | 60.0% | |
| TATCTTTCTCGCGGAGGGGG+AGG | + | chr3_3:71035886-71035905 | Msa0469240:intron | 60.0% | |
| ATCTTTCTCGCGGAGGGGGA+GGG | + | chr3_3:71035887-71035906 | Msa0469240:intron | 60.0% | |
| TTGGGTCGAAGACGGTGGTC+AGG | - | chr3_3:71035919-71035938 | None:intergenic | 60.0% | |
| GGTGATAGATGAGGGTGGCG+TGG | + | chr3_3:71037028-71037047 | Msa0469240:intron | 60.0% | |
| !! | ACATGATGGGTGGGGTGGAG+TGG | - | chr3_3:71040215-71040234 | None:intergenic | 60.0% |
| ! | CAGAGCACCCTCTTGGTACG+TGG | + | chr3_3:71040681-71040700 | Msa0469240:CDS | 60.0% |
| !! | GTGGTCGCGCTGGTTGTGTG+AGG | + | chr3_3:71033585-71033604 | Msa0469240:five_prime_UTR | 65.0% |
| TCGATGGCGAGGTCACCGCA+AGG | - | chr3_3:71033754-71033773 | None:intergenic | 65.0% | |
| TCTTTCTCGCGGAGGGGGAG+GGG | + | chr3_3:71035888-71035907 | Msa0469240:intron | 65.0% | |
| GATGGGTGGGGTGGAGTGGA+AGG | - | chr3_3:71040211-71040230 | None:intergenic | 65.0% | |
| CGGTGCTTCCACCACCACCC+AGG | - | chr3_3:71036785-71036804 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 71033553 | 71041101 | 71033553 | ID=Msa0469240;Name=Msa0469240 |
| chr3_3 | mRNA | 71033553 | 71041101 | 71033553 | ID=Msa0469240-mRNA-1;Parent=Msa0469240;Name=Msa0469240-mRNA-1;_AED=0.14;_eAED=0.14;_QI=66|0.75|0.76|1|1|1|13|332|397 |
| chr3_3 | exon | 71033553 | 71033810 | 71033553 | ID=Msa0469240-mRNA-1:exon:17385;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71033909 | 71033969 | 71033909 | ID=Msa0469240-mRNA-1:exon:17386;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71035531 | 71035673 | 71035531 | ID=Msa0469240-mRNA-1:exon:17387;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71036237 | 71036333 | 71036237 | ID=Msa0469240-mRNA-1:exon:17388;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71037192 | 71037256 | 71037192 | ID=Msa0469240-mRNA-1:exon:17389;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71037343 | 71037434 | 71037343 | ID=Msa0469240-mRNA-1:exon:17390;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71037527 | 71037608 | 71037527 | ID=Msa0469240-mRNA-1:exon:17391;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71037718 | 71037810 | 71037718 | ID=Msa0469240-mRNA-1:exon:17392;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71037932 | 71037996 | 71037932 | ID=Msa0469240-mRNA-1:exon:17393;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71038708 | 71038720 | 71038708 | ID=Msa0469240-mRNA-1:exon:17394;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71038797 | 71038877 | 71038797 | ID=Msa0469240-mRNA-1:exon:17395;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71040485 | 71040593 | 71040485 | ID=Msa0469240-mRNA-1:exon:17396;Parent=Msa0469240-mRNA-1 |
| chr3_3 | exon | 71040669 | 71041101 | 71040669 | ID=Msa0469240-mRNA-1:exon:17397;Parent=Msa0469240-mRNA-1 |
| chr3_3 | five_prime_UTR | 71033553 | 71033618 | 71033553 | ID=Msa0469240-mRNA-1:five_prime_utr;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71033619 | 71033810 | 71033619 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71033909 | 71033969 | 71033909 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71035531 | 71035673 | 71035531 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71036237 | 71036333 | 71036237 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71037192 | 71037256 | 71037192 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71037343 | 71037434 | 71037343 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71037527 | 71037608 | 71037527 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71037718 | 71037810 | 71037718 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71037932 | 71037996 | 71037932 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71038708 | 71038720 | 71038708 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71038797 | 71038877 | 71038797 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71040485 | 71040593 | 71040485 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | CDS | 71040669 | 71040769 | 71040669 | ID=Msa0469240-mRNA-1:cds;Parent=Msa0469240-mRNA-1 |
| chr3_3 | three_prime_UTR | 71040770 | 71041101 | 71040770 | ID=Msa0469240-mRNA-1:three_prime_utr;Parent=Msa0469240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
