Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484020 | TXG46661.1 | 83.088 | 1017 | 136 | 2 | 1 | 981 | 147 | 1163 | 0.0 | 1719 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484020 | sp|Q8HVY3|RPOC2_SOYBN | 86.070 | 603 | 82 | 1 | 286 | 886 | 3 | 605 | 0.0 | 1066 |
| Msa0484020 | sp|Q8HVY3|RPOC2_SOYBN | 80.769 | 104 | 20 | 0 | 886 | 989 | 1114 | 1217 | 1.89e-43 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484020 | A0A7J7NDQ3 | 85.061 | 984 | 144 | 1 | 1 | 981 | 1136 | 2119 | 0.0 | 1711 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0139800 | Msa0484020 | 0.838817 | 2.295038e-57 | -8.615850e-47 |
| Msa0139810 | Msa0484020 | 0.856473 | 3.141292e-62 | -8.615850e-47 |
| Msa0398630 | Msa0484020 | 0.807590 | 4.691831e-50 | -8.615850e-47 |
| Msa0268170 | Msa0484020 | 0.812802 | 3.529587e-51 | -8.615850e-47 |
| Msa0268390 | Msa0484020 | 0.818803 | 1.620231e-52 | -8.615850e-47 |
| Msa0268400 | Msa0484020 | 0.804131 | 2.503048e-49 | -8.615850e-47 |
| Msa0268410 | Msa0484020 | 0.813457 | 2.534924e-51 | -8.615850e-47 |
| Msa0268550 | Msa0484020 | 0.812150 | 4.898850e-51 | -8.615850e-47 |
| Msa0268610 | Msa0484020 | 0.886214 | 4.155396e-72 | -8.615850e-47 |
| Msa0268740 | Msa0484020 | 0.803777 | 2.964456e-49 | -8.615850e-47 |
| Msa0268780 | Msa0484020 | 0.844233 | 8.582545e-59 | -8.615850e-47 |
| Msa0268840 | Msa0484020 | 0.830407 | 2.987852e-55 | -8.615850e-47 |
| Msa0268940 | Msa0484020 | 0.825180 | 5.395420e-54 | -8.615850e-47 |
| Msa0268990 | Msa0484020 | 0.833281 | 5.834773e-56 | -8.615850e-47 |
| Msa0269050 | Msa0484020 | 0.820595 | 6.311493e-53 | -8.615850e-47 |
| Msa0344300 | Msa0484020 | 0.806839 | 6.769380e-50 | -8.615850e-47 |
| Msa0484020 | Msa0582510 | 0.806877 | 6.644738e-50 | -8.615850e-47 |
| Msa0484020 | Msa0582520 | 0.813090 | 3.051297e-51 | -8.615850e-47 |
| Msa0484020 | Msa0582630 | 0.845508 | 3.887121e-59 | -8.615850e-47 |
| Msa0484020 | Msa0582660 | 0.814096 | 1.833600e-51 | -8.615850e-47 |
| Msa0484020 | Msa0582690 | 0.805604 | 1.231813e-49 | -8.615850e-47 |
| Msa0484020 | Msa0582700 | 0.815225 | 1.031092e-51 | -8.615850e-47 |
| Msa0484020 | Msa0582750 | 0.832911 | 7.212873e-56 | -8.615850e-47 |
| Msa0484020 | Msa0582780 | 0.823418 | 1.399928e-53 | -8.615850e-47 |
| Msa0484020 | Msa0582810 | 0.806837 | 6.776441e-50 | -8.615850e-47 |
| Msa0484020 | Msa0582820 | 0.809048 | 2.293380e-50 | -8.615850e-47 |
| Msa0484020 | Msa0931080 | 0.819619 | 1.056141e-52 | -8.615850e-47 |
| Msa0484020 | Msa0931140 | 0.829195 | 5.895260e-55 | -8.615850e-47 |
| Msa0484020 | Msa0931210 | 0.825282 | 5.102194e-54 | -8.615850e-47 |
| Msa0484020 | Msa0931240 | 0.822887 | 1.862843e-53 | -8.615850e-47 |
| Msa0484020 | Msa0931260 | 0.803527 | 3.341760e-49 | -8.615850e-47 |
| Msa0484020 | Msa0931270 | 0.813180 | 2.916454e-51 | -8.615850e-47 |
| Msa0484020 | Msa1086070 | 0.814611 | 1.410671e-51 | -8.615850e-47 |
| Msa0484020 | Msa1086150 | 0.832209 | 1.076839e-55 | -8.615850e-47 |
| Msa0484020 | Msa1086180 | 0.819204 | 1.312897e-52 | -8.615850e-47 |
| Msa0484020 | Msa1086200 | 0.801644 | 8.170702e-49 | -8.615850e-47 |
| Msa0484020 | Msa1086210 | 0.825991 | 3.466249e-54 | -8.615850e-47 |
| Msa0484020 | Msa1086250 | 0.840496 | 8.394599e-58 | -8.615850e-47 |
| Msa0484020 | Msa1086380 | 0.834186 | 3.465891e-56 | -8.615850e-47 |
| Msa0484020 | Msa1086450 | 0.816180 | 6.316174e-52 | -8.615850e-47 |
| Msa0484020 | Msa1086470 | 0.820893 | 5.392961e-53 | -8.615850e-47 |
| Msa0484020 | Msa1086880 | 0.813741 | 2.195763e-51 | -8.615850e-47 |
| Msa0484020 | Msa1086910 | 0.809066 | 2.273834e-50 | -8.615850e-47 |
| Msa0484020 | Msa1143130 | 0.807195 | 5.691573e-50 | -8.615850e-47 |
| Msa0484020 | Msa1143180 | 0.800791 | 1.220980e-48 | -8.615850e-47 |
| Msa0484020 | Msa1354900 | 0.816792 | 4.605931e-52 | -8.615850e-47 |
| Msa0484020 | Msa1355070 | 0.817385 | 3.388931e-52 | -8.615850e-47 |
| Msa0484020 | Msa1355100 | 0.809221 | 2.106707e-50 | -8.615850e-47 |
| Msa0484020 | Msa1380620 | 0.821652 | 3.602405e-53 | -8.615850e-47 |
| Msa0484020 | Msa1380680 | 0.820445 | 6.834636e-53 | -8.615850e-47 |
| Msa0484020 | Msa1380690 | 0.847420 | 1.169464e-59 | -8.615850e-47 |
| Msa0484020 | Msa1394040 | 0.801165 | 1.023975e-48 | -8.615850e-47 |
| Msa0484020 | Msa1394150 | 0.801687 | 8.007014e-49 | -8.615850e-47 |
| Msa0484020 | Msa1394230 | 0.810169 | 1.317434e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484020 | MtrunA17_CPg0493001 | 90.299 | 670 | 47 | 4 | 286 | 946 | 7 | 667 | 0.0 | 1223 |
| Msa0484020 | MtrunA17_CPg0493001 | 89.320 | 103 | 11 | 0 | 887 | 989 | 1115 | 1217 | 1.14e-48 | 189 |
| Msa0484020 | MtrunA17_Chr4g0016671 | 90.299 | 670 | 47 | 4 | 286 | 946 | 7 | 667 | 0.0 | 1223 |
| Msa0484020 | MtrunA17_Chr4g0016671 | 89.320 | 103 | 11 | 0 | 887 | 989 | 1115 | 1217 | 1.14e-48 | 189 |
| Msa0484020 | MtrunA17_Chr4g0015581 | 88.208 | 424 | 7 | 1 | 398 | 821 | 1 | 381 | 0.0 | 756 |
| Msa0484020 | MtrunA17_Chr3g0108491 | 99.649 | 285 | 1 | 0 | 1 | 285 | 146 | 430 | 0.0 | 581 |
| Msa0484020 | MtrunA17_CPg0493021 | 99.649 | 285 | 1 | 0 | 1 | 285 | 146 | 430 | 0.0 | 581 |
| Msa0484020 | MtrunA17_Chr4g0016661 | 99.649 | 285 | 1 | 0 | 1 | 285 | 146 | 430 | 0.0 | 581 |
| Msa0484020 | MtrunA17_Chr3g0108441 | 99.649 | 285 | 1 | 0 | 1 | 285 | 146 | 430 | 0.0 | 580 |
| Msa0484020 | MtrunA17_Chr3g0095741 | 77.936 | 281 | 42 | 5 | 674 | 944 | 8 | 278 | 4.75e-136 | 417 |
| Msa0484020 | MtrunA17_Chr8g0342181 | 97.872 | 141 | 3 | 0 | 145 | 285 | 124 | 264 | 7.86e-89 | 286 |
| Msa0484020 | MtrunA17_Chr4g0015551 | 74.457 | 184 | 2 | 1 | 1 | 184 | 33 | 171 | 9.88e-79 | 254 |
| Msa0484020 | MtrunA17_Chr3g0096371 | 95.652 | 115 | 5 | 0 | 25 | 139 | 1 | 115 | 3.85e-69 | 225 |
| Msa0484020 | MtrunA17_Chr4g0015591 | 89.320 | 103 | 11 | 0 | 887 | 989 | 507 | 609 | 5.30e-50 | 189 |
| Msa0484020 | MtrunA17_Chr4g0015591 | 53.543 | 127 | 41 | 4 | 829 | 946 | 1 | 118 | 5.57e-27 | 118 |
| Msa0484020 | MtrunA17_Chr2g0318321 | 95.652 | 69 | 3 | 0 | 286 | 354 | 26 | 94 | 9.39e-39 | 139 |
| Msa0484020 | MtrunA17_Chr4g0002751 | 80.519 | 77 | 15 | 0 | 1 | 77 | 17 | 93 | 3.94e-32 | 120 |
| Msa0484020 | MtrunA17_Chr4g0030401 | 27.961 | 304 | 189 | 6 | 1 | 280 | 252 | 549 | 4.22e-28 | 122 |
| Msa0484020 | MtrunA17_Chr4g0030391 | 28.852 | 305 | 185 | 6 | 1 | 280 | 251 | 548 | 5.13e-28 | 122 |
| Msa0484020 | MtrunA17_Chr4g0015571 | 100.000 | 44 | 0 | 0 | 286 | 329 | 7 | 50 | 7.13e-23 | 92.8 |
| Msa0484020 | MtrunA17_Chr5g0406121 | 29.183 | 257 | 151 | 5 | 53 | 280 | 294 | 548 | 3.34e-21 | 100 |
| Msa0484020 | MtrunA17_Chr4g0044991 | 25.949 | 316 | 183 | 7 | 8 | 280 | 317 | 624 | 1.66e-19 | 95.1 |
| Msa0484020 | MtrunA17_Chr4g0002761 | 65.455 | 55 | 19 | 0 | 232 | 286 | 1 | 55 | 4.21e-15 | 71.2 |
| Msa0484020 | MtrunA17_Chr8g0353071 | 28.053 | 303 | 186 | 10 | 2 | 279 | 211 | 506 | 1.02e-11 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484020 | ATCG00170.1 | 76.190 | 672 | 140 | 4 | 286 | 946 | 3 | 665 | 0.0 | 1025 |
| Msa0484020 | ATCG00170.1 | 84.375 | 96 | 15 | 0 | 886 | 981 | 1107 | 1202 | 2.72e-44 | 175 |
| Msa0484020 | ATCG00180.1 | 95.439 | 285 | 13 | 0 | 1 | 285 | 264 | 548 | 0.0 | 562 |
| Msa0484020 | AT5G60040.1 | 28.990 | 307 | 184 | 6 | 1 | 280 | 254 | 553 | 1.72e-27 | 121 |
| Msa0484020 | AT5G60040.2 | 28.990 | 307 | 184 | 6 | 1 | 280 | 264 | 563 | 1.95e-27 | 121 |
| Msa0484020 | AT4G35800.2 | 29.020 | 255 | 154 | 4 | 53 | 280 | 295 | 549 | 1.02e-21 | 102 |
| Msa0484020 | AT4G35800.1 | 29.020 | 255 | 154 | 4 | 53 | 280 | 295 | 549 | 1.02e-21 | 102 |
| Msa0484020 | AT3G57660.2 | 24.806 | 387 | 215 | 12 | 8 | 348 | 335 | 691 | 1.23e-17 | 89.4 |
| Msa0484020 | AT3G57660.2 | 28.458 | 253 | 139 | 10 | 409 | 625 | 923 | 1169 | 6.34e-15 | 80.5 |
| Msa0484020 | AT3G57660.1 | 24.806 | 387 | 215 | 12 | 8 | 348 | 348 | 704 | 1.57e-17 | 89.0 |
| Msa0484020 | AT3G57660.1 | 28.458 | 253 | 139 | 10 | 409 | 625 | 936 | 1182 | 6.57e-15 | 80.5 |
| Msa0484020 | AT1G63020.1 | 25.000 | 300 | 183 | 9 | 3 | 279 | 220 | 500 | 9.96e-14 | 76.6 |
| Msa0484020 | AT1G63020.2 | 25.000 | 300 | 183 | 9 | 3 | 279 | 220 | 500 | 9.96e-14 | 76.6 |
| Msa0484020 | AT1G63020.4 | 25.000 | 300 | 183 | 9 | 3 | 279 | 220 | 500 | 1.01e-13 | 76.3 |
| Msa0484020 | AT1G63020.3 | 25.000 | 300 | 183 | 9 | 3 | 279 | 220 | 500 | 1.04e-13 | 76.6 |
| Msa0484020 | AT1G63020.5 | 27.604 | 192 | 123 | 3 | 104 | 279 | 1 | 192 | 9.22e-13 | 73.2 |
| Msa0484020 | AT2G40030.1 | 29.016 | 193 | 121 | 3 | 103 | 279 | 310 | 502 | 9.10e-11 | 67.0 |
Find 202 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGTATCAAAATTCTTTC+TGG | 0.155430 | 3_4:-1138613 | None:intergenic |
| TTCTGGTATCATTCCATTTC+GGG | 0.158141 | 3_4:-1138596 | None:intergenic |
| TGAACAACAAAGTTCTATTT+TGG | 0.177929 | 3_4:+1138132 | Msa0484020:CDS |
| TACGGATCATTCTCATTTAA+TGG | 0.188994 | 3_4:+1139551 | Msa0484020:CDS |
| TCTGCTAATAAGTCGTTTAA+TGG | 0.223864 | 3_4:-1137960 | None:intergenic |
| ACCTCTTGTCTCCGGCTATT+GGG | 0.225839 | 3_4:+1137225 | Msa0484020:CDS |
| TCTAATATCTGTTCCACTTT+TGG | 0.236437 | 3_4:-1141337 | None:intergenic |
| AAATCTATTTCTTCGTCTTT+TGG | 0.240397 | 3_4:-1139610 | None:intergenic |
| CCCTGGATCGATAAACCTTT+TGG | 0.244433 | 3_4:-1141512 | None:intergenic |
| ATCCTCTCATTCCGACTAAT+TGG | 0.248879 | 3_4:-1138339 | None:intergenic |
| TGTTCATGTGCCTTTATCTT+TGG | 0.264426 | 3_4:+1137160 | Msa0484020:CDS |
| CCAACTCAAGATATGCTTAT+AGG | 0.271742 | 3_4:+1137263 | Msa0484020:CDS |
| CATTATATGGACTGGATTAA+AGG | 0.289410 | 3_4:-1138278 | None:intergenic |
| AACCTCTTGTCTCCGGCTAT+TGG | 0.290298 | 3_4:+1137224 | Msa0484020:CDS |
| GCACGTCCTTCTACTAAAAT+AGG | 0.292699 | 3_4:-1137074 | None:intergenic |
| GGATCTGCCGATTGTGTTAT+GGG | 0.297223 | 3_4:+1138794 | Msa0484020:CDS |
| TTTCTGGTATCATTCCATTT+CGG | 0.299397 | 3_4:-1138597 | None:intergenic |
| TAGATCTACTTGTTGTTAAT+AGG | 0.299908 | 3_4:-1136596 | None:intergenic |
| AGTCATTTATGGATCTTATC+AGG | 0.301174 | 3_4:+1139321 | Msa0484020:CDS |
| TGGATCTGCCGATTGTGTTA+TGG | 0.301508 | 3_4:+1138793 | Msa0484020:CDS |
| GGGTCAGTCATCCTAAAATT+AGG | 0.301712 | 3_4:-1138256 | None:intergenic |
| AGCGCAAAGTCGTATTTCTT+TGG | 0.301847 | 3_4:+1141480 | Msa0484020:CDS |
| AGCGCCTACTTTGCATAGAT+TGG | 0.308716 | 3_4:+1137034 | Msa0484020:CDS |
| CCTCCATCTATTTGAATAAT+CGG | 0.310599 | 3_4:-1136504 | None:intergenic |
| TCATGGGGACCTGGTAGAAT+TGG | 0.318933 | 3_4:+1138828 | Msa0484020:CDS |
| TTCTCGTAAATTGCTTTGAA+TGG | 0.322270 | 3_4:-1138398 | None:intergenic |
| TTATTAAGTTTGAAGACTTT+TGG | 0.326721 | 3_4:+1139477 | Msa0484020:CDS |
| TTTACATCCATTAGTGTGTA+AGG | 0.327520 | 3_4:+1137103 | Msa0484020:CDS |
| CAGTATCCACAACCCCTTTA+CGG | 0.329838 | 3_4:-1138462 | None:intergenic |
| AACTTTGTTGTTCAGCATCT+TGG | 0.334259 | 3_4:-1138123 | None:intergenic |
| AGAAATCAAGATATTGGAAT+TGG | 0.334567 | 3_4:+1138694 | Msa0484020:CDS |
| TACGCCAATCCATTGAAATA+TGG | 0.339395 | 3_4:+1138197 | Msa0484020:CDS |
| ATTATTGCTGGTCAATCTAT+TGG | 0.340445 | 3_4:+1138865 | Msa0484020:CDS |
| TTGAATAATCGGTCTCAATT+CGG | 0.341142 | 3_4:-1136493 | None:intergenic |
| ATTCCTTGGGGATTCTTGAT+TGG | 0.341306 | 3_4:+1141442 | Msa0484020:CDS |
| GTCGTTAGAAATCAAGATAT+TGG | 0.341954 | 3_4:+1138688 | Msa0484020:CDS |
| GGAAAACGAGTTGATTATTC+GGG | 0.350240 | 3_4:+1136789 | Msa0484020:CDS |
| AGACCGATTATTCAAATAGA+TGG | 0.352617 | 3_4:+1136501 | Msa0484020:CDS |
| ACTGCTACATCTATTTCATT+AGG | 0.354727 | 3_4:+1138058 | Msa0484020:CDS |
| GATAAAGGATTTCTCCATAA+TGG | 0.357948 | 3_4:-1141249 | None:intergenic |
| CTAAAATATCTCCTTGATAA+AGG | 0.358065 | 3_4:-1141264 | None:intergenic |
| TGGAAAACGAGTTGATTATT+CGG | 0.358566 | 3_4:+1136788 | Msa0484020:CDS |
| ATCTTGAGTTGGTACGGAAA+TGG | 0.362284 | 3_4:-1137252 | None:intergenic |
| TGAATAATCGGTCTCAATTC+GGG | 0.364643 | 3_4:-1136492 | None:intergenic |
| CTTAATGTTAGTTGAGTTCC+CGG | 0.369671 | 3_4:-1138892 | None:intergenic |
| ATTATATGGACTGGATTAAA+GGG | 0.370361 | 3_4:-1138277 | None:intergenic |
| GCAACCATTCATGGCCATTA+TGG | 0.371253 | 3_4:+1141235 | Msa0484020:CDS |
| AACATTGATTCTCTTTCTAC+TGG | 0.378165 | 3_4:+1139402 | Msa0484020:CDS |
| TGGACTAGCCATCCTTTAGA+AGG | 0.382153 | 3_4:-1138103 | None:intergenic |
| TTCCGCTAGTTAATACATAA+AGG | 0.382446 | 3_4:-1137286 | None:intergenic |
| TTGAATCCCTTACACACTAA+TGG | 0.385461 | 3_4:-1137110 | None:intergenic |
| CAAGAATTCTCGGCATTCCT+TGG | 0.385715 | 3_4:+1141428 | Msa0484020:CDS |
| GTGGATACACTCCTTGATAA+TGG | 0.387696 | 3_4:+1136666 | Msa0484020:CDS |
| ATTTCTGTAAATACCCGAAA+TGG | 0.389944 | 3_4:+1138583 | Msa0484020:CDS |
| TTTCAGACATTTCTAATTCG+TGG | 0.395006 | 3_4:+1136888 | Msa0484020:CDS |
| GGCGCTCTATTCAGCAATAC+TGG | 0.401200 | 3_4:-1137017 | None:intergenic |
| AGTATCCACAACCCCTTTAC+GGG | 0.401249 | 3_4:-1138461 | None:intergenic |
| AAGAATTCTCGGCATTCCTT+GGG | 0.401980 | 3_4:+1141429 | Msa0484020:CDS |
| TCCAAAAGGTTTATCGATCC+AGG | 0.404612 | 3_4:+1141511 | Msa0484020:CDS |
| TGGTCAATCTATTGGCGAAC+CGG | 0.405693 | 3_4:+1138873 | Msa0484020:CDS |
| GGATTCAATGCAGACTTTGA+TGG | 0.407959 | 3_4:+1137125 | Msa0484020:CDS |
| TCATGTGCCTTTATCTTTGG+AGG | 0.409231 | 3_4:+1137163 | Msa0484020:CDS |
| CTTGCTACGGAGCCCGTAAA+GGG | 0.410011 | 3_4:+1138449 | Msa0484020:CDS |
| AGCAGATTAATAGACCATTT+CGG | 0.411046 | 3_4:+1137977 | Msa0484020:CDS |
| GCTTGAGCCTCCAAAGATAA+AGG | 0.413525 | 3_4:-1137170 | None:intergenic |
| AACGAACTAATGCGACCTTC+TGG | 0.414791 | 3_4:+1139666 | Msa0484020:CDS |
| TCTTTCCTTCTTGAATCGAT+TGG | 0.414961 | 3_4:-1139644 | None:intergenic |
| GACGTATTCCTACAGGTAAA+GGG | 0.421613 | 3_4:-1138769 | None:intergenic |
| ACCATTGATAGGTATTTCAA+TGG | 0.423769 | 3_4:-1139694 | None:intergenic |
| GATTCAATGCAGACTTTGAT+GGG | 0.425961 | 3_4:+1137126 | Msa0484020:CDS |
| TCTTGAGTTGGTACGGAAAT+GGG | 0.426083 | 3_4:-1137251 | None:intergenic |
| CTCAATTCGGGAGGAAGAAC+TGG | 0.430438 | 3_4:-1136480 | None:intergenic |
| TCTCGTAAATTGCTTTGAAT+GGG | 0.433790 | 3_4:-1138397 | None:intergenic |
| TTATTATGACCGTCCCTCAT+TGG | 0.440271 | 3_4:-1136702 | None:intergenic |
| ACTCCAGGAGCAACCATTCA+TGG | 0.440561 | 3_4:+1141226 | Msa0484020:intron |
| TCTACCAGGTCCCCATGAAT+AGG | 0.440638 | 3_4:-1138823 | None:intergenic |
| CATGGGGACCTGGTAGAATT+GGG | 0.442448 | 3_4:+1138829 | Msa0484020:CDS |
| CATACCATATTTCAATGGAT+TGG | 0.443039 | 3_4:-1138201 | None:intergenic |
| CAGATTGCGGTACGATTCGC+GGG | 0.446348 | 3_4:+1138560 | Msa0484020:CDS |
| TTTGCATAGATTGGGCATAC+AGG | 0.446557 | 3_4:+1137043 | Msa0484020:CDS |
| TGTAGCATACCATATTTCAA+TGG | 0.450731 | 3_4:-1138206 | None:intergenic |
| CATACTGGTGGAGTATTCAC+AGG | 0.451249 | 3_4:+1138922 | Msa0484020:CDS |
| TCCATTGAAATACCTATCAA+TGG | 0.461052 | 3_4:+1139693 | Msa0484020:CDS |
| CTGGATCAAGTAAAGACTCT+AGG | 0.462436 | 3_4:+1138022 | Msa0484020:CDS |
| CTAGAGTCTTTACTTGATCC+AGG | 0.463607 | 3_4:-1138021 | None:intergenic |
| AGACGTATTCCTACAGGTAA+AGG | 0.465006 | 3_4:-1138770 | None:intergenic |
| GAGTGTATAACAAGAATTCT+CGG | 0.465449 | 3_4:+1141418 | Msa0484020:CDS |
| CCTTCTTGAATCGATTGGAA+TGG | 0.469170 | 3_4:-1139639 | None:intergenic |
| TATGGAGAAATCCTTTATCA+AGG | 0.470177 | 3_4:+1141253 | Msa0484020:CDS |
| GTAGCAGACGATATATATAT+CGG | 0.471989 | 3_4:+1138652 | Msa0484020:CDS |
| GCGCCTACTTTGCATAGATT+GGG | 0.476543 | 3_4:+1137035 | Msa0484020:CDS |
| TGAAGTATTTCCCATACAAT+CGG | 0.477354 | 3_4:-1136975 | None:intergenic |
| CCTCTTGTCTCCGGCTATTG+GGG | 0.480180 | 3_4:+1137226 | Msa0484020:CDS |
| GGGCGTTCTGTTATTGTCGT+AGG | 0.483193 | 3_4:+1136810 | Msa0484020:CDS |
| TTCTCCATAATGGCCATGAA+TGG | 0.483718 | 3_4:-1141239 | None:intergenic |
| GTCTTTCACAATAACGTGAT+AGG | 0.489141 | 3_4:+1137929 | Msa0484020:CDS |
| GTTATTGTGAAAGACTAGAT+TGG | 0.489846 | 3_4:-1137921 | None:intergenic |
| TCTTGCTACGGAGCCCGTAA+AGG | 0.490200 | 3_4:+1138448 | Msa0484020:CDS |
| AACACAAGGTCTTCCAAAAG+TGG | 0.491269 | 3_4:+1141324 | Msa0484020:CDS |
| TGGAGGGAAACTAATGAGTT+CGG | 0.494350 | 3_4:+1136521 | Msa0484020:CDS |
| GGCATATACATCACACATCC+TGG | 0.495134 | 3_4:+1138003 | Msa0484020:CDS |
| TAACAATACCTTCTAAAGGA+TGG | 0.495965 | 3_4:+1138095 | Msa0484020:CDS |
| ACTCAGAAGGCGAAATGCAT+TGG | 0.496258 | 3_4:+1139235 | Msa0484020:CDS |
| TAGCTCTATTGCTATTTCGC+GGG | 0.496998 | 3_4:-1136865 | None:intergenic |
| GAAGCTGTAGGTATTATTGC+TGG | 0.500714 | 3_4:+1138853 | Msa0484020:CDS |
| TCATACAAACCTCTTGTCTC+CGG | 0.506883 | 3_4:+1137217 | Msa0484020:CDS |
| ATGGGCGGAGTCCTATTCAT+GGG | 0.508984 | 3_4:+1138812 | Msa0484020:CDS |
| CTTTGGTTAATAAATCCAAA+AGG | 0.509300 | 3_4:+1141497 | Msa0484020:CDS |
| GACTCCGCCCATAACACAAT+CGG | 0.512450 | 3_4:-1138801 | None:intergenic |
| CGGAGCCCGTAAAGGGGTTG+TGG | 0.513039 | 3_4:+1138456 | Msa0484020:CDS |
| AAATCAATCATTTGTCCTTG+TGG | 0.513235 | 3_4:-1138373 | None:intergenic |
| ATAGCTCTATTGCTATTTCG+CGG | 0.516257 | 3_4:-1136866 | None:intergenic |
| TAGATGTAGCAGTAGCTTGA+CGG | 0.516966 | 3_4:-1138048 | None:intergenic |
| TATGGGCGGAGTCCTATTCA+TGG | 0.517790 | 3_4:+1138811 | Msa0484020:CDS |
| GAGTTGCTAAGAGTAAAATA+CGG | 0.520079 | 3_4:+1136943 | Msa0484020:CDS |
| AGATTTCGAGAGACTCTGCT+TGG | 0.523467 | 3_4:+1136768 | Msa0484020:CDS |
| ATGTATATGCCATTCCGAAA+TGG | 0.525535 | 3_4:-1137991 | None:intergenic |
| GGTCAATCTATTGGCGAACC+GGG | 0.527123 | 3_4:+1138874 | Msa0484020:CDS |
| AGACTTTGATGGGGATCAAA+TGG | 0.531054 | 3_4:+1137136 | Msa0484020:CDS |
| ACAGATTGCGGTACGATTCG+CGG | 0.531220 | 3_4:+1138559 | Msa0484020:CDS |
| GTCCGCGGATTCCATTATCA+AGG | 0.532137 | 3_4:-1136677 | None:intergenic |
| CCTATAAGCATATCTTGAGT+TGG | 0.532621 | 3_4:-1137263 | None:intergenic |
| ATTTAATCAAATAATATGTA+CGG | 0.533241 | 3_4:+1139533 | Msa0484020:CDS |
| GAATATATAATTTCTTGCTA+CGG | 0.534554 | 3_4:+1138436 | Msa0484020:CDS |
| ATCCATGACGTGTACGTGTA+GGG | 0.535056 | 3_4:-1139011 | None:intergenic |
| CAGCTTCTCCCAATTCTACC+AGG | 0.535523 | 3_4:-1138837 | None:intergenic |
| GATATAATTGAGGGCAAAGA+GGG | 0.535939 | 3_4:+1136744 | Msa0484020:CDS |
| TCTATATTACATATAAAAGC+AGG | 0.536951 | 3_4:-1139036 | None:intergenic |
| TGGATCAAGTAAAGACTCTA+GGG | 0.538268 | 3_4:+1138023 | Msa0484020:CDS |
| AATACTTCAAGAAGTTATGC+GGG | 0.538847 | 3_4:+1136989 | Msa0484020:CDS |
| AAGCATATCTTGAGTTGGTA+CGG | 0.543078 | 3_4:-1137258 | None:intergenic |
| CCATTCCAATCGATTCAAGA+AGG | 0.543286 | 3_4:+1139639 | Msa0484020:CDS |
| GATCCAAGACGTATTCCTAC+AGG | 0.544747 | 3_4:-1138776 | None:intergenic |
| TTACCTGTAGGAATACGTCT+TGG | 0.547868 | 3_4:+1138773 | Msa0484020:CDS |
| CATATTTATTCTGACTCAGA+AGG | 0.548655 | 3_4:+1139222 | Msa0484020:CDS |
| TGACACATTACTAATTCCCC+TGG | 0.549045 | 3_4:-1136621 | None:intergenic |
| AAGACCTTGTGTTATATCAC+CGG | 0.552596 | 3_4:-1141314 | None:intergenic |
| TATTATGGATGTGTACTCCC+TGG | 0.558762 | 3_4:-1141529 | None:intergenic |
| AGTTGCTAAGAGTAAAATAC+GGG | 0.563519 | 3_4:+1136944 | Msa0484020:CDS |
| TTACATCCATTAGTGTGTAA+GGG | 0.565613 | 3_4:+1137104 | Msa0484020:CDS |
| CACCCTACACGTACACGTCA+TGG | 0.566616 | 3_4:+1139009 | Msa0484020:CDS |
| TCTATAGAAGAGTTATCTAT+CGG | 0.571448 | 3_4:+1136556 | Msa0484020:CDS |
| GCTGTACGAACATCAGATGC+TGG | 0.573261 | 3_4:+1138484 | Msa0484020:CDS |
| TACACGTCGACTTGTTGAAG+TGG | 0.573503 | 3_4:+1138513 | Msa0484020:CDS |
| CCGATTATTCAAATAGATGG+AGG | 0.576436 | 3_4:+1136504 | Msa0484020:CDS |
| ATGCCCAATCTATGCAAAGT+AGG | 0.578492 | 3_4:-1137038 | None:intergenic |
| CACCAATTAGTCGGAATGAG+AGG | 0.580106 | 3_4:+1138337 | Msa0484020:CDS |
| GAGTCCTATTCATGGGGACC+TGG | 0.582108 | 3_4:+1138819 | Msa0484020:CDS |
| CCAAAAGGTTTATCGATCCA+GGG | 0.584019 | 3_4:+1141512 | Msa0484020:CDS |
| TCACTTTCATTACATCGATG+TGG | 0.585158 | 3_4:+1136837 | Msa0484020:CDS |
| TCTTATCAGGAAAGTCGTGC+AGG | 0.586356 | 3_4:+1139334 | Msa0484020:CDS |
| ATTAATAGACCATTTCGGAA+TGG | 0.587547 | 3_4:+1137982 | Msa0484020:CDS |
| GAAATGGGATCCCCAATAGC+CGG | 0.587924 | 3_4:-1137236 | None:intergenic |
| ACGATATATATATCGGTTCA+CGG | 0.590851 | 3_4:+1138659 | Msa0484020:CDS |
| GGCCTTTATGTATTAACTAG+CGG | 0.596927 | 3_4:+1137284 | Msa0484020:CDS |
| AAAATTGGTACAAGAAGCCG+TGG | 0.599616 | 3_4:+1136647 | Msa0484020:CDS |
| TATCCATGACGTGTACGTGT+AGG | 0.600683 | 3_4:-1139012 | None:intergenic |
| AGCTCTATTGCTATTTCGCG+GGG | 0.600779 | 3_4:-1136864 | None:intergenic |
| ATTCAAAGCAATTTACGAGA+AGG | 0.601229 | 3_4:+1138400 | Msa0484020:CDS |
| CTCCTTGATAATGGAATCCG+CGG | 0.604913 | 3_4:+1136675 | Msa0484020:CDS |
| AGATATAATTGAGGGCAAAG+AGG | 0.606620 | 3_4:+1136743 | Msa0484020:CDS |
| CATCGATGTAATGAAAGTGA+TGG | 0.607503 | 3_4:-1136834 | None:intergenic |
| TCTCAAGTGCACCAATTAGT+CGG | 0.615181 | 3_4:+1138328 | Msa0484020:CDS |
| CCCCAATAGCCGGAGACAAG+AGG | 0.615798 | 3_4:-1137226 | None:intergenic |
| ATTATCAAGGAGTGTATCCA+CGG | 0.619206 | 3_4:-1136664 | None:intergenic |
| AATCCGCGGACAACCAATGA+GGG | 0.620928 | 3_4:+1136689 | Msa0484020:CDS |
| CGTCCCTCATTGGTTGTCCG+CGG | 0.625858 | 3_4:-1136692 | None:intergenic |
| GTGATTGCTGAGATCCGCGC+GGG | 0.626051 | 3_4:+1139162 | Msa0484020:CDS |
| AGAATTCTCGGCATTCCTTG+GGG | 0.628635 | 3_4:+1141430 | Msa0484020:CDS |
| ACGTATTCCTACAGGTAAAG+GGG | 0.629974 | 3_4:-1138768 | None:intergenic |
| TTGCTACGGAGCCCGTAAAG+GGG | 0.638134 | 3_4:+1138450 | Msa0484020:CDS |
| AAATACTTCAAGAAGTTATG+CGG | 0.639489 | 3_4:+1136988 | Msa0484020:CDS |
| CGATTATTCAAATAGATGGA+GGG | 0.639639 | 3_4:+1136505 | Msa0484020:CDS |
| GTAGAATTGGGAGAAGCTGT+AGG | 0.641313 | 3_4:+1138841 | Msa0484020:CDS |
| TTTCACAATAACGTGATAGG+TGG | 0.645396 | 3_4:+1137932 | Msa0484020:CDS |
| ATACTGGTGGAGTATTCACA+GGG | 0.646983 | 3_4:+1138923 | Msa0484020:CDS |
| CGCGGACAACCAATGAGGGA+CGG | 0.650205 | 3_4:+1136693 | Msa0484020:CDS |
| GTTGTACGTCGAACAGATTG+CGG | 0.659130 | 3_4:+1138547 | Msa0484020:CDS |
| ACAACAAGTAGATCTACACC+AGG | 0.661649 | 3_4:+1136603 | Msa0484020:CDS |
| ATTCAATGCAGACTTTGATG+GGG | 0.662689 | 3_4:+1137127 | Msa0484020:CDS |
| GAAAACGAGTTGATTATTCG+GGG | 0.664266 | 3_4:+1136790 | Msa0484020:CDS |
| TGGGCGGAGTCCTATTCATG+GGG | 0.665077 | 3_4:+1138813 | Msa0484020:CDS |
| GCACCAATCAAGAATCCCCA+AGG | 0.666821 | 3_4:-1141445 | None:intergenic |
| GAATCCGCGGACAACCAATG+AGG | 0.667535 | 3_4:+1136688 | Msa0484020:CDS |
| TACTTCAAGAAGTTATGCGG+GGG | 0.669171 | 3_4:+1136991 | Msa0484020:CDS |
| ATTTCAATGGAAACACCAGA+AGG | 0.673294 | 3_4:-1139681 | None:intergenic |
| CGTATTCCTACAGGTAAAGG+GGG | 0.679391 | 3_4:-1138767 | None:intergenic |
| TTATATGGACTGGATTAAAG+GGG | 0.684921 | 3_4:-1138276 | None:intergenic |
| ATACTTCAAGAAGTTATGCG+GGG | 0.687954 | 3_4:+1136990 | Msa0484020:CDS |
| TCAGTATGGGAATGTACATG+CGG | 0.691247 | 3_4:+1138165 | Msa0484020:CDS |
| TTCGGATGCATGGTACACAT+CGG | 0.696241 | 3_4:-1139262 | None:intergenic |
| CAACAAGTAGATCTACACCA+GGG | 0.701288 | 3_4:+1136604 | Msa0484020:CDS |
| AACAAGTAGATCTACACCAG+GGG | 0.706918 | 3_4:+1136605 | Msa0484020:CDS |
| GGATTAATGTCAGATCCACA+AGG | 0.711466 | 3_4:+1138358 | Msa0484020:CDS |
| ATAATCGGTCTCAATTCGGG+AGG | 0.712530 | 3_4:-1136489 | None:intergenic |
| TTAACTAGCGGAAATCGTCG+AGG | 0.734048 | 3_4:+1137296 | Msa0484020:CDS |
| AGATCCGGTGATATAACACA+AGG | 0.736976 | 3_4:+1141310 | Msa0484020:CDS |
| TCTGCCGATTGTGTTATGGG+CGG | 0.746299 | 3_4:+1138797 | Msa0484020:CDS |
| TAAAAGTATATGTTCCCGCG+CGG | 0.748407 | 3_4:-1139176 | None:intergenic |
| ACTGGTGGAGTATTCACAGG+GGG | 0.750203 | 3_4:+1138925 | Msa0484020:CDS |
| AGTGATTGCTGAGATCCGCG+CGG | 0.769084 | 3_4:+1139161 | Msa0484020:CDS |
| TACTGGTGGAGTATTCACAG+GGG | 0.793942 | 3_4:+1138924 | Msa0484020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATCAAATAATATGTA+CGG | + | chr3_4:1139533-1139552 | Msa0484020:CDS | 10.0% |
| !!! | TTTTTTTTTTCTTTTCTAAT+CGG | - | chr3_4:1140025-1140044 | None:intergenic | 10.0% |
| !! | AATCAAAAAAAATTCATAAT+TGG | + | chr3_4:1140159-1140178 | Msa0484020:intron | 10.0% |
| !!! | TTATTATTAATTGGAATTTT+AGG | - | chr3_4:1140801-1140820 | None:intergenic | 10.0% |
| !!! | ATTTTGATACAAACATTAAT+TGG | + | chr3_4:1138622-1138641 | Msa0484020:CDS | 15.0% |
| !!! | ATACTTTTAATTTGAAAGAA+AGG | + | chr3_4:1139190-1139209 | Msa0484020:CDS | 15.0% |
| !!! | TACTTTTAATTTGAAAGAAA+GGG | + | chr3_4:1139191-1139210 | Msa0484020:CDS | 15.0% |
| !! | TACATTACTATACAAAAATT+CGG | - | chr3_4:1139283-1139302 | None:intergenic | 15.0% |
| !! | ATTACTAAATATAGAACTAT+AGG | + | chr3_4:1139783-1139802 | Msa0484020:intron | 15.0% |
| !!! | ATCGAATTAAAAATATTTTC+TGG | + | chr3_4:1140047-1140066 | Msa0484020:intron | 15.0% |
| !!! | TGTAATTTTATATGAAATAC+CGG | + | chr3_4:1140238-1140257 | Msa0484020:intron | 15.0% |
| !! | AATTATATTCTTTATGGAAA+TGG | + | chr3_4:1140335-1140354 | Msa0484020:intron | 15.0% |
| !! | TTTGATTATGAGTTATTAAA+CGG | - | chr3_4:1140881-1140900 | None:intergenic | 15.0% |
| !! | TTAGAATTTCTGCAATTAAA+CGG | - | chr3_4:1137344-1137363 | None:intergenic | 20.0% |
| !! | GTACCTATTATGAAATTTAT+GGG | + | chr3_4:1137561-1137580 | Msa0484020:intron | 20.0% |
| !! | GTAAATTTATGTTATGATAC+TGG | + | chr3_4:1137755-1137774 | Msa0484020:intron | 20.0% |
| !!! | AAGAAATGAATCCTAATTTT+AGG | + | chr3_4:1138245-1138264 | Msa0484020:CDS | 20.0% |
| !! | GAATATATAATTTCTTGCTA+CGG | + | chr3_4:1138436-1138455 | Msa0484020:CDS | 20.0% |
| !!! | AATTTTATTTTTCCATTCGA+GGG | - | chr3_4:1138973-1138992 | None:intergenic | 20.0% |
| !!! | AAATTTTATTTTTCCATTCG+AGG | - | chr3_4:1138974-1138993 | None:intergenic | 20.0% |
| !! | TCTATATTACATATAAAAGC+AGG | - | chr3_4:1139039-1139058 | None:intergenic | 20.0% |
| !!! | TGAACTAATAGAAAACTTTT+TGG | - | chr3_4:1139114-1139133 | None:intergenic | 20.0% |
| !!! | TTATTAAGTTTGAAGACTTT+TGG | + | chr3_4:1139477-1139496 | Msa0484020:CDS | 20.0% |
| !!! | TCACGATACTTTTTATTTAT+TGG | + | chr3_4:1139587-1139606 | Msa0484020:CDS | 20.0% |
| !!! | GAAATCTTCTTTTTGAAAAA+CGG | - | chr3_4:1139817-1139836 | None:intergenic | 20.0% |
| !!! | CAAAACAAAATACTTTTTCT+TGG | - | chr3_4:1140210-1140229 | None:intergenic | 20.0% |
| !!! | CAAGAAAAAGTATTTTGTTT+TGG | + | chr3_4:1140208-1140227 | Msa0484020:intron | 20.0% |
| !!! | AAAAGTATTTTGTTTTGGTT+CGG | + | chr3_4:1140213-1140232 | Msa0484020:intron | 20.0% |
| !! | GGTATTTCATATAAAATTAC+AGG | - | chr3_4:1140239-1140258 | None:intergenic | 20.0% |
| !! | GTTGTCAATTATATTCTTTA+TGG | + | chr3_4:1140329-1140348 | Msa0484020:intron | 20.0% |
| !! | TTGGAATGAATAGAAAAAAA+TGG | - | chr3_4:1140618-1140637 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCTATTCATTCCA+AGG | + | chr3_4:1140617-1140636 | Msa0484020:intron | 20.0% |
| !!! | TGATTTTTTAATTTTTGCCT+TGG | - | chr3_4:1140637-1140656 | None:intergenic | 20.0% |
| !! | TATGTTGTTGAATAGAAATA+AGG | + | chr3_4:1140683-1140702 | Msa0484020:intron | 20.0% |
| !! | TGATATTTAACATTGTTGAA+TGG | - | chr3_4:1140759-1140778 | None:intergenic | 20.0% |
| !! | AACAATGTTAAATATCACAA+TGG | + | chr3_4:1140762-1140781 | Msa0484020:intron | 20.0% |
| !! | ACAATGTTAAATATCACAAT+GGG | + | chr3_4:1140763-1140782 | Msa0484020:intron | 20.0% |
| !! | AATAAAAATTTCCAACTTGA+CGG | - | chr3_4:1140851-1140870 | None:intergenic | 20.0% |
| !! | TGTATAGCTAAAATGAAAAA+TGG | + | chr3_4:1141119-1141138 | Msa0484020:intron | 20.0% |
| ! | TCTATAGAAGAGTTATCTAT+CGG | + | chr3_4:1136556-1136575 | Msa0484020:CDS | 25.0% |
| !!! | TAGATCTACTTGTTGTTAAT+AGG | - | chr3_4:1136599-1136618 | None:intergenic | 25.0% |
| ! | AGTAATGTGTCAAGAAAAAT+TGG | + | chr3_4:1136632-1136651 | Msa0484020:CDS | 25.0% |
| !! | ATCGTTTTCAGATATAATTG+AGG | + | chr3_4:1136734-1136753 | Msa0484020:CDS | 25.0% |
| !! | TCGTTTTCAGATATAATTGA+GGG | + | chr3_4:1136735-1136754 | Msa0484020:CDS | 25.0% |
| ! | AAATACTTCAAGAAGTTATG+CGG | + | chr3_4:1136988-1137007 | Msa0484020:CDS | 25.0% |
| !!! | TTTCAACCTATTTTAGTAGA+AGG | + | chr3_4:1137068-1137087 | Msa0484020:CDS | 25.0% |
| ! | TCATAGGAATTGCAAAAAAA+GGG | - | chr3_4:1137416-1137435 | None:intergenic | 25.0% |
| ! | ATCATAGGAATTGCAAAAAA+AGG | - | chr3_4:1137417-1137436 | None:intergenic | 25.0% |
| !! | TAAATTTCGATAGTCCTTTT+TGG | + | chr3_4:1137465-1137484 | Msa0484020:intron | 25.0% |
| ! | GGTACCTATTATGAAATTTA+TGG | + | chr3_4:1137560-1137579 | Msa0484020:intron | 25.0% |
| ! | ATGCCCATAAATTTCATAAT+AGG | - | chr3_4:1137567-1137586 | None:intergenic | 25.0% |
| ! | TGATTAGATACCATATGAAT+AGG | - | chr3_4:1137705-1137724 | None:intergenic | 25.0% |
| ! | ATGGTATCTAATCATATAGA+TGG | + | chr3_4:1137711-1137730 | Msa0484020:intron | 25.0% |
| ! | ATAACATAAATTTACCTAGC+TGG | - | chr3_4:1137750-1137769 | None:intergenic | 25.0% |
| ! | CGTGAATAAACATAAAGAAA+AGG | + | chr3_4:1137816-1137835 | Msa0484020:intron | 25.0% |
| ! | AATGAATTTGAGTCAATGAT+TGG | - | chr3_4:1137849-1137868 | None:intergenic | 25.0% |
| !! | CTTTTAACAATACCTTCTAA+AGG | + | chr3_4:1138091-1138110 | Msa0484020:CDS | 25.0% |
| !! | TGAACAACAAAGTTCTATTT+TGG | + | chr3_4:1138132-1138151 | Msa0484020:CDS | 25.0% |
| ! | TTGGAAAAACATAATCAGTA+TGG | + | chr3_4:1138151-1138170 | Msa0484020:CDS | 25.0% |
| ! | TGGAAAAACATAATCAGTAT+GGG | + | chr3_4:1138152-1138171 | Msa0484020:CDS | 25.0% |
| !!! | ATTATATGGACTGGATTAAA+GGG | - | chr3_4:1138280-1138299 | None:intergenic | 25.0% |
| ! | GTTTGTATCAAAATTCTTTC+TGG | - | chr3_4:1138616-1138635 | None:intergenic | 25.0% |
| ! | AGAAATCAAGATATTGGAAT+TGG | + | chr3_4:1138694-1138713 | Msa0484020:CDS | 25.0% |
| !! | ACATTAAGAACTTTTCATAC+TGG | + | chr3_4:1138907-1138926 | Msa0484020:CDS | 25.0% |
| !!! | ATTTTATTTTTCCATTCGAG+GGG | - | chr3_4:1138972-1138991 | None:intergenic | 25.0% |
| !! | ACTAATAGAAAACTTTTTGG+TGG | - | chr3_4:1139111-1139130 | None:intergenic | 25.0% |
| ! | TACCAAAAACAAGTCATTTA+TGG | + | chr3_4:1139310-1139329 | Msa0484020:CDS | 25.0% |
| !!! | ATCCATAAATGACTTGTTTT+TGG | - | chr3_4:1139315-1139334 | None:intergenic | 25.0% |
| !! | ACTTTTGGTACAAAAGAAAA+GGG | + | chr3_4:1139492-1139511 | Msa0484020:CDS | 25.0% |
| !!! | AAATCTATTTCTTCGTCTTT+TGG | - | chr3_4:1139613-1139632 | None:intergenic | 25.0% |
| ! | CTATGAAAAATACCATTGAT+AGG | - | chr3_4:1139708-1139727 | None:intergenic | 25.0% |
| !!! | TCTACTTTGATTTGGTATTT+TGG | - | chr3_4:1139870-1139889 | None:intergenic | 25.0% |
| ! | AAAATCGATCTACTTTGATT+TGG | - | chr3_4:1139878-1139897 | None:intergenic | 25.0% |
| ! | CTTCTTATATTGAAAGTGAT+TGG | - | chr3_4:1139984-1140003 | None:intergenic | 25.0% |
| ! | AACGGTAAAAAAAAAATGGA+AGG | + | chr3_4:1140136-1140155 | Msa0484020:intron | 25.0% |
| !!! | CAAAAAAAGTACTTCTATTG+AGG | + | chr3_4:1140432-1140451 | Msa0484020:intron | 25.0% |
| ! | TTTGTTGAAGTAAGTACAAA+CGG | + | chr3_4:1140469-1140488 | Msa0484020:intron | 25.0% |
| ! | ATGACAAAATTATCCAAGAT+CGG | - | chr3_4:1140713-1140732 | None:intergenic | 25.0% |
| ! | ATAAAAATTTCCAACTTGAC+GGG | - | chr3_4:1140850-1140869 | None:intergenic | 25.0% |
| ! | TTTCCAACTTGACAAAATAA+CGG | + | chr3_4:1140917-1140936 | Msa0484020:intron | 25.0% |
| ! | AAATACCAATTCAAATGGAA+TGG | - | chr3_4:1141029-1141048 | None:intergenic | 25.0% |
| ! | GTAGAAAATACCAATTCAAA+TGG | - | chr3_4:1141034-1141053 | None:intergenic | 25.0% |
| !! | ACGTTTACAATAATTAGTCT+TGG | + | chr3_4:1141074-1141093 | Msa0484020:intron | 25.0% |
| !! | ACCACATCTAAAACTAAAAT+CGG | + | chr3_4:1141142-1141161 | Msa0484020:intron | 25.0% |
| ! | TCAAGTTATAACTGTTCAAA+TGG | + | chr3_4:1141166-1141185 | Msa0484020:intron | 25.0% |
| ! | GGATTCTGTAATAATAAGAT+CGG | + | chr3_4:1141187-1141206 | Msa0484020:intron | 25.0% |
| ! | CTAAAATATCTCCTTGATAA+AGG | - | chr3_4:1141267-1141286 | None:intergenic | 25.0% |
| ! | ATATATGAAAAATCGAGATC+CGG | + | chr3_4:1141295-1141314 | Msa0484020:CDS | 25.0% |
| ! | CTTTGGTTAATAAATCCAAA+AGG | + | chr3_4:1141497-1141516 | Msa0484020:CDS | 25.0% |
| TTGAATAATCGGTCTCAATT+CGG | - | chr3_4:1136496-1136515 | None:intergenic | 30.0% | |
| AGACCGATTATTCAAATAGA+TGG | + | chr3_4:1136501-1136520 | Msa0484020:CDS | 30.0% | |
| CCTCCATCTATTTGAATAAT+CGG | - | chr3_4:1136507-1136526 | None:intergenic | 30.0% | |
| CGATTATTCAAATAGATGGA+GGG | + | chr3_4:1136505-1136524 | Msa0484020:CDS | 30.0% | |
| !! | TGGAAAACGAGTTGATTATT+CGG | + | chr3_4:1136788-1136807 | Msa0484020:CDS | 30.0% |
| TTTCAGACATTTCTAATTCG+TGG | + | chr3_4:1136888-1136907 | Msa0484020:CDS | 30.0% | |
| ! | AAACATTTTGCTTCGAACAT+AGG | + | chr3_4:1136921-1136940 | Msa0484020:CDS | 30.0% |
| GAGTTGCTAAGAGTAAAATA+CGG | + | chr3_4:1136943-1136962 | Msa0484020:CDS | 30.0% | |
| AGTTGCTAAGAGTAAAATAC+GGG | + | chr3_4:1136944-1136963 | Msa0484020:CDS | 30.0% | |
| ! | TGAAGTATTTCCCATACAAT+CGG | - | chr3_4:1136978-1136997 | None:intergenic | 30.0% |
| AATACTTCAAGAAGTTATGC+GGG | + | chr3_4:1136989-1137008 | Msa0484020:CDS | 30.0% | |
| TTTACATCCATTAGTGTGTA+AGG | + | chr3_4:1137103-1137122 | Msa0484020:CDS | 30.0% | |
| TTACATCCATTAGTGTGTAA+GGG | + | chr3_4:1137104-1137123 | Msa0484020:CDS | 30.0% | |
| TTCCGCTAGTTAATACATAA+AGG | - | chr3_4:1137289-1137308 | None:intergenic | 30.0% | |
| ! | GAAGTTCACTATGAATCTTT+TGG | + | chr3_4:1137539-1137558 | Msa0484020:intron | 30.0% |
| ATATACATTAGAACCACTGT+TGG | + | chr3_4:1137626-1137645 | Msa0484020:intron | 30.0% | |
| AAAAGAAATATGACCAACAG+TGG | - | chr3_4:1137642-1137661 | None:intergenic | 30.0% | |
| GAAATTGAAGAAGCTATACA+AGG | + | chr3_4:1137668-1137687 | Msa0484020:intron | 30.0% | |
| GTTATTGTGAAAGACTAGAT+TGG | - | chr3_4:1137924-1137943 | None:intergenic | 30.0% | |
| TCTGCTAATAAGTCGTTTAA+TGG | - | chr3_4:1137963-1137982 | None:intergenic | 30.0% | |
| AGCAGATTAATAGACCATTT+CGG | + | chr3_4:1137977-1137996 | Msa0484020:CDS | 30.0% | |
| ATTAATAGACCATTTCGGAA+TGG | + | chr3_4:1137982-1138001 | Msa0484020:CDS | 30.0% | |
| ACTGCTACATCTATTTCATT+AGG | + | chr3_4:1138058-1138077 | Msa0484020:CDS | 30.0% | |
| ! | TAACAATACCTTCTAAAGGA+TGG | + | chr3_4:1138095-1138114 | Msa0484020:CDS | 30.0% |
| CATACCATATTTCAATGGAT+TGG | - | chr3_4:1138204-1138223 | None:intergenic | 30.0% | |
| TGTAGCATACCATATTTCAA+TGG | - | chr3_4:1138209-1138228 | None:intergenic | 30.0% | |
| !! | TTATATGGACTGGATTAAAG+GGG | - | chr3_4:1138279-1138298 | None:intergenic | 30.0% |
| !! | CATTATATGGACTGGATTAA+AGG | - | chr3_4:1138281-1138300 | None:intergenic | 30.0% |
| GAAAAAGACATTATATGGAC+TGG | - | chr3_4:1138289-1138308 | None:intergenic | 30.0% | |
| ! | GTCCATATAATGTCTTTTTC+AGG | + | chr3_4:1138289-1138308 | Msa0484020:CDS | 30.0% |
| CTCCTGAAAAAGACATTATA+TGG | - | chr3_4:1138294-1138313 | None:intergenic | 30.0% | |
| AAATCAATCATTTGTCCTTG+TGG | - | chr3_4:1138376-1138395 | None:intergenic | 30.0% | |
| ! | TCTCGTAAATTGCTTTGAAT+GGG | - | chr3_4:1138400-1138419 | None:intergenic | 30.0% |
| ! | TTCTCGTAAATTGCTTTGAA+TGG | - | chr3_4:1138401-1138420 | None:intergenic | 30.0% |
| ATTCAAAGCAATTTACGAGA+AGG | + | chr3_4:1138400-1138419 | Msa0484020:CDS | 30.0% | |
| ATTTCTGTAAATACCCGAAA+TGG | + | chr3_4:1138583-1138602 | Msa0484020:CDS | 30.0% | |
| ! | TTTCTGGTATCATTCCATTT+CGG | - | chr3_4:1138600-1138619 | None:intergenic | 30.0% |
| GTAGCAGACGATATATATAT+CGG | + | chr3_4:1138652-1138671 | Msa0484020:CDS | 30.0% | |
| !! | ACGATATATATATCGGTTCA+CGG | + | chr3_4:1138659-1138678 | Msa0484020:CDS | 30.0% |
| GTCGTTAGAAATCAAGATAT+TGG | + | chr3_4:1138688-1138707 | Msa0484020:CDS | 30.0% | |
| ATTATTGCTGGTCAATCTAT+TGG | + | chr3_4:1138865-1138884 | Msa0484020:CDS | 30.0% | |
| ! | TTAAGAACTTTTCATACTGG+TGG | + | chr3_4:1138910-1138929 | Msa0484020:CDS | 30.0% |
| !!! | TTTTATTTTTCCATTCGAGG+GGG | - | chr3_4:1138971-1138990 | None:intergenic | 30.0% |
| CATATTTATTCTGACTCAGA+AGG | + | chr3_4:1139222-1139241 | Msa0484020:CDS | 30.0% | |
| TATACAAAAATTCGGATGCA+TGG | - | chr3_4:1139275-1139294 | None:intergenic | 30.0% | |
| AGTCATTTATGGATCTTATC+AGG | + | chr3_4:1139321-1139340 | Msa0484020:CDS | 30.0% | |
| !!! | AATCCATTTTTTACTTCGCA+AGG | + | chr3_4:1139365-1139384 | Msa0484020:CDS | 30.0% |
| !! | AACATTGATTCTCTTTCTAC+TGG | + | chr3_4:1139402-1139421 | Msa0484020:CDS | 30.0% |
| ! | GACTTTTGGTACAAAAGAAA+AGG | + | chr3_4:1139491-1139510 | Msa0484020:CDS | 30.0% |
| ! | CTTTTGGTACAAAAGAAAAG+GGG | + | chr3_4:1139493-1139512 | Msa0484020:CDS | 30.0% |
| TACGGATCATTCTCATTTAA+TGG | + | chr3_4:1139551-1139570 | Msa0484020:CDS | 30.0% | |
| !! | AAAGTATCGTGAAAAATAGC+AGG | - | chr3_4:1139579-1139598 | None:intergenic | 30.0% |
| TCCATTGAAATACCTATCAA+TGG | + | chr3_4:1139693-1139712 | Msa0484020:CDS | 30.0% | |
| ACCATTGATAGGTATTTCAA+TGG | - | chr3_4:1139697-1139716 | None:intergenic | 30.0% | |
| TACCATTATGGAAGAAGATT+CGG | - | chr3_4:1139931-1139950 | None:intergenic | 30.0% | |
| AATCTTCTTCCATAATGGTA+CGG | + | chr3_4:1139931-1139950 | Msa0484020:intron | 30.0% | |
| ACTATTATTCCGTACCATTA+TGG | - | chr3_4:1139943-1139962 | None:intergenic | 30.0% | |
| AATAATAGTCTCGTTGGAAT+AGG | + | chr3_4:1139954-1139973 | Msa0484020:intron | 30.0% | |
| TTCAATATAAGAAGTCGAGT+AGG | + | chr3_4:1139990-1140009 | Msa0484020:intron | 30.0% | |
| !!! | CATTTTTTTTTTACCGTTCC+GGG | - | chr3_4:1140134-1140153 | None:intergenic | 30.0% |
| !!! | CCATTTTTTTTTTACCGTTC+CGG | - | chr3_4:1140135-1140154 | None:intergenic | 30.0% |
| ATAATTGGATCTATGTCCAA+TGG | + | chr3_4:1140174-1140193 | Msa0484020:intron | 30.0% | |
| TTTACAAAATCGATACTGTC+CGG | - | chr3_4:1140260-1140279 | None:intergenic | 30.0% | |
| ATGGAAATGGAAAATCCATT+CGG | + | chr3_4:1140348-1140367 | Msa0484020:intron | 30.0% | |
| AACTAATTGAATCCTTGTGT+CGG | - | chr3_4:1140380-1140399 | None:intergenic | 30.0% | |
| ACACAAGGATTCAATTAGTT+CGG | + | chr3_4:1140380-1140399 | Msa0484020:intron | 30.0% | |
| !! | GACTTGTTTAGTCTTGAATT+GGG | + | chr3_4:1140402-1140421 | Msa0484020:intron | 30.0% |
| !! | AAAAAGTACTTCTATTGAGG+AGG | + | chr3_4:1140435-1140454 | Msa0484020:intron | 30.0% |
| GTTTGTACTTACTTCAACAA+AGG | - | chr3_4:1140470-1140489 | None:intergenic | 30.0% | |
| AAATCACTTAGCCAAAATCA+CGG | + | chr3_4:1140651-1140670 | Msa0484020:intron | 30.0% | |
| AATAATTCATTAGGCCCTTT+AGG | + | chr3_4:1140819-1140838 | Msa0484020:intron | 30.0% | |
| ATAATTCATTAGGCCCTTTA+GGG | + | chr3_4:1140820-1140839 | Msa0484020:intron | 30.0% | |
| !! | TTTCCGTTATTTTGTCAAGT+TGG | - | chr3_4:1140923-1140942 | None:intergenic | 30.0% |
| AACGATATTACTGTCTAGAT+CGG | - | chr3_4:1141000-1141019 | None:intergenic | 30.0% | |
| TGAATCCATTCCATTTGAAT+TGG | + | chr3_4:1141021-1141040 | Msa0484020:intron | 30.0% | |
| ! | CCACATCTAAAACTAAAATC+GGG | + | chr3_4:1141143-1141162 | Msa0484020:intron | 30.0% |
| GATAAAGGATTTCTCCATAA+TGG | - | chr3_4:1141252-1141271 | None:intergenic | 30.0% | |
| TATGGAGAAATCCTTTATCA+AGG | + | chr3_4:1141253-1141272 | Msa0484020:CDS | 30.0% | |
| ! | TCTAATATCTGTTCCACTTT+TGG | - | chr3_4:1141340-1141359 | None:intergenic | 30.0% |
| TCGAAAAAAGAATTGATGCT+TGG | + | chr3_4:1141392-1141411 | Msa0484020:CDS | 30.0% | |
| GAGTGTATAACAAGAATTCT+CGG | + | chr3_4:1141418-1141437 | Msa0484020:CDS | 30.0% | |
| TGAATAATCGGTCTCAATTC+GGG | - | chr3_4:1136495-1136514 | None:intergenic | 35.0% | |
| CCGATTATTCAAATAGATGG+AGG | + | chr3_4:1136504-1136523 | Msa0484020:CDS | 35.0% | |
| ! | ATTATCAAGGAGTGTATCCA+CGG | - | chr3_4:1136667-1136686 | None:intergenic | 35.0% |
| AGATATAATTGAGGGCAAAG+AGG | + | chr3_4:1136743-1136762 | Msa0484020:CDS | 35.0% | |
| GATATAATTGAGGGCAAAGA+GGG | + | chr3_4:1136744-1136763 | Msa0484020:CDS | 35.0% | |
| !! | GGAAAACGAGTTGATTATTC+GGG | + | chr3_4:1136789-1136808 | Msa0484020:CDS | 35.0% |
| !! | GAAAACGAGTTGATTATTCG+GGG | + | chr3_4:1136790-1136809 | Msa0484020:CDS | 35.0% |
| CATCGATGTAATGAAAGTGA+TGG | - | chr3_4:1136837-1136856 | None:intergenic | 35.0% | |
| TCACTTTCATTACATCGATG+TGG | + | chr3_4:1136837-1136856 | Msa0484020:CDS | 35.0% | |
| !! | ATAGCTCTATTGCTATTTCG+CGG | - | chr3_4:1136869-1136888 | None:intergenic | 35.0% |
| GGAAAAAGAACCGATTGTAT+GGG | + | chr3_4:1136965-1136984 | Msa0484020:CDS | 35.0% | |
| ATACTTCAAGAAGTTATGCG+GGG | + | chr3_4:1136990-1137009 | Msa0484020:CDS | 35.0% | |
| TTGAATCCCTTACACACTAA+TGG | - | chr3_4:1137113-1137132 | None:intergenic | 35.0% | |
| GATTCAATGCAGACTTTGAT+GGG | + | chr3_4:1137126-1137145 | Msa0484020:CDS | 35.0% | |
| ATTCAATGCAGACTTTGATG+GGG | + | chr3_4:1137127-1137146 | Msa0484020:CDS | 35.0% | |
| TGTTCATGTGCCTTTATCTT+TGG | + | chr3_4:1137160-1137179 | Msa0484020:CDS | 35.0% | |
| !! | AAGCATATCTTGAGTTGGTA+CGG | - | chr3_4:1137261-1137280 | None:intergenic | 35.0% |
| CCTATAAGCATATCTTGAGT+TGG | - | chr3_4:1137266-1137285 | None:intergenic | 35.0% | |
| CCAACTCAAGATATGCTTAT+AGG | + | chr3_4:1137263-1137282 | Msa0484020:CDS | 35.0% | |
| GGCCTTTATGTATTAACTAG+CGG | + | chr3_4:1137284-1137303 | Msa0484020:CDS | 35.0% | |
| TGCAATTCCTATGATGCAAT+TGG | + | chr3_4:1137422-1137441 | Msa0484020:intron | 35.0% | |
| ATAAGCTCCAATTGCATCAT+AGG | - | chr3_4:1137432-1137451 | None:intergenic | 35.0% | |
| GATTCATAGTGAACTTCGAT+AGG | - | chr3_4:1137536-1137555 | None:intergenic | 35.0% | |
| ! | TTTTCTCGAGCCTATTCATA+TGG | + | chr3_4:1137692-1137711 | Msa0484020:intron | 35.0% |
| TATGATACTGGCGTAAATTC+AGG | + | chr3_4:1137767-1137786 | Msa0484020:intron | 35.0% | |
| GTCTTTCACAATAACGTGAT+AGG | + | chr3_4:1137929-1137948 | Msa0484020:CDS | 35.0% | |
| TTTCACAATAACGTGATAGG+TGG | + | chr3_4:1137932-1137951 | Msa0484020:CDS | 35.0% | |
| ATGTATATGCCATTCCGAAA+TGG | - | chr3_4:1137994-1138013 | None:intergenic | 35.0% | |
| TGGATCAAGTAAAGACTCTA+GGG | + | chr3_4:1138023-1138042 | Msa0484020:CDS | 35.0% | |
| !! | AACTTTGTTGTTCAGCATCT+TGG | - | chr3_4:1138126-1138145 | None:intergenic | 35.0% |
| TACGCCAATCCATTGAAATA+TGG | + | chr3_4:1138197-1138216 | Msa0484020:CDS | 35.0% | |
| TTCTGGTATCATTCCATTTC+GGG | - | chr3_4:1138599-1138618 | None:intergenic | 35.0% | |
| AAGGGGGTTCGAATAAATAT+TGG | - | chr3_4:1138754-1138773 | None:intergenic | 35.0% | |
| CTTAATGTTAGTTGAGTTCC+CGG | - | chr3_4:1138895-1138914 | None:intergenic | 35.0% | |
| GATCCTTGCGAAGTAAAAAA+TGG | - | chr3_4:1139371-1139390 | None:intergenic | 35.0% | |
| TCTTTCCTTCTTGAATCGAT+TGG | - | chr3_4:1139647-1139666 | None:intergenic | 35.0% | |
| ATTTCAATGGAAACACCAGA+AGG | - | chr3_4:1139684-1139703 | None:intergenic | 35.0% | |
| GAATTCTGTCTTCTGTATTG+AGG | - | chr3_4:1139759-1139778 | None:intergenic | 35.0% | |
| CAATACAGAAGACAGAATTC+AGG | + | chr3_4:1139759-1139778 | Msa0484020:intron | 35.0% | |
| ! | GAAGATTTCATTGAGTATCG+AGG | + | chr3_4:1139828-1139847 | Msa0484020:intron | 35.0% |
| GGTAAAATATGCACTTCTTC+GGG | - | chr3_4:1139909-1139928 | None:intergenic | 35.0% | |
| GGGTAAAATATGCACTTCTT+CGG | - | chr3_4:1139910-1139929 | None:intergenic | 35.0% | |
| ACCATTATGGAAGAAGATTC+GGG | - | chr3_4:1139930-1139949 | None:intergenic | 35.0% | |
| AATATAAGAAGTCGAGTAGG+CGG | + | chr3_4:1139993-1140012 | Msa0484020:intron | 35.0% | |
| ! | TCTGGAAATATCCATTTTCC+CGG | + | chr3_4:1140065-1140084 | Msa0484020:intron | 35.0% |
| TATCAAGATAGAACTGTGTC+GGG | - | chr3_4:1140108-1140127 | None:intergenic | 35.0% | |
| GTATCAAGATAGAACTGTGT+CGG | - | chr3_4:1140109-1140128 | None:intergenic | 35.0% | |
| CCGGAACGGTAAAAAAAAAA+TGG | + | chr3_4:1140132-1140151 | Msa0484020:intron | 35.0% | |
| TCTTTCCTGGAATAGATCTT+GGG | - | chr3_4:1140291-1140310 | None:intergenic | 35.0% | |
| ATTCCAGGAAAGAGATAATC+TGG | + | chr3_4:1140298-1140317 | Msa0484020:intron | 35.0% | |
| TGGAAATGGAAAATCCATTC+GGG | + | chr3_4:1140349-1140368 | Msa0484020:intron | 35.0% | |
| !! | GGACTTGTTTAGTCTTGAAT+TGG | + | chr3_4:1140401-1140420 | Msa0484020:intron | 35.0% |
| !! | TTAGTCTTGAATTGGGATCA+AGG | + | chr3_4:1140409-1140428 | Msa0484020:intron | 35.0% |
| TTACTTCAACAAAGGAAGAG+GGG | - | chr3_4:1140462-1140481 | None:intergenic | 35.0% | |
| CTTACTTCAACAAAGGAAGA+GGG | - | chr3_4:1140463-1140482 | None:intergenic | 35.0% | |
| ACTTACTTCAACAAAGGAAG+AGG | - | chr3_4:1140464-1140483 | None:intergenic | 35.0% | |
| AGAAAAAGAAATGACCCATC+TGG | + | chr3_4:1140546-1140565 | Msa0484020:intron | 35.0% | |
| ATTGATCGCGGATAATGAAT+CGG | + | chr3_4:1140575-1140594 | Msa0484020:intron | 35.0% | |
| ! | TACGAATAGTTCCGTGATTT+TGG | - | chr3_4:1140665-1140684 | None:intergenic | 35.0% |
| ACGATATTACTGTCTAGATC+GGG | - | chr3_4:1140999-1141018 | None:intergenic | 35.0% | |
| !!! | CCCGATTTTAGTTTTAGATG+TGG | - | chr3_4:1141146-1141165 | None:intergenic | 35.0% |
| TAAGATCGGCTAACCATATT+TGG | + | chr3_4:1141201-1141220 | Msa0484020:intron | 35.0% | |
| AAGACCTTGTGTTATATCAC+CGG | - | chr3_4:1141317-1141336 | None:intergenic | 35.0% | |
| TGGAGGGAAACTAATGAGTT+CGG | + | chr3_4:1136521-1136540 | Msa0484020:CDS | 40.0% | |
| ACAACAAGTAGATCTACACC+AGG | + | chr3_4:1136603-1136622 | Msa0484020:CDS | 40.0% | |
| CAACAAGTAGATCTACACCA+GGG | + | chr3_4:1136604-1136623 | Msa0484020:CDS | 40.0% | |
| AACAAGTAGATCTACACCAG+GGG | + | chr3_4:1136605-1136624 | Msa0484020:CDS | 40.0% | |
| TGACACATTACTAATTCCCC+TGG | - | chr3_4:1136624-1136643 | None:intergenic | 40.0% | |
| AAAATTGGTACAAGAAGCCG+TGG | + | chr3_4:1136647-1136666 | Msa0484020:CDS | 40.0% | |
| GTGGATACACTCCTTGATAA+TGG | + | chr3_4:1136666-1136685 | Msa0484020:CDS | 40.0% | |
| TTATTATGACCGTCCCTCAT+TGG | - | chr3_4:1136705-1136724 | None:intergenic | 40.0% | |
| !! | TAGCTCTATTGCTATTTCGC+GGG | - | chr3_4:1136868-1136887 | None:intergenic | 40.0% |
| GGGAAAAAGAACCGATTGTA+TGG | + | chr3_4:1136964-1136983 | Msa0484020:CDS | 40.0% | |
| TACTTCAAGAAGTTATGCGG+GGG | + | chr3_4:1136991-1137010 | Msa0484020:CDS | 40.0% | |
| ATGCCCAATCTATGCAAAGT+AGG | - | chr3_4:1137041-1137060 | None:intergenic | 40.0% | |
| TTTGCATAGATTGGGCATAC+AGG | + | chr3_4:1137043-1137062 | Msa0484020:CDS | 40.0% | |
| GCACGTCCTTCTACTAAAAT+AGG | - | chr3_4:1137077-1137096 | None:intergenic | 40.0% | |
| GGATTCAATGCAGACTTTGA+TGG | + | chr3_4:1137125-1137144 | Msa0484020:CDS | 40.0% | |
| AGACTTTGATGGGGATCAAA+TGG | + | chr3_4:1137136-1137155 | Msa0484020:CDS | 40.0% | |
| TCATGTGCCTTTATCTTTGG+AGG | + | chr3_4:1137163-1137182 | Msa0484020:CDS | 40.0% | |
| TCATACAAACCTCTTGTCTC+CGG | + | chr3_4:1137217-1137236 | Msa0484020:CDS | 40.0% | |
| !! | TCTTGAGTTGGTACGGAAAT+GGG | - | chr3_4:1137254-1137273 | None:intergenic | 40.0% |
| !! | ATCTTGAGTTGGTACGGAAA+TGG | - | chr3_4:1137255-1137274 | None:intergenic | 40.0% |
| !! | GTTAGTGTTGATATCCAGCT+AGG | + | chr3_4:1137733-1137752 | Msa0484020:intron | 40.0% |
| ATATTCCACTCAGTGGGATT+CGG | - | chr3_4:1137878-1137897 | None:intergenic | 40.0% | |
| !! | GTGGAATATGGAGGTACTTA+TGG | + | chr3_4:1137889-1137908 | Msa0484020:intron | 40.0% |
| CTAGAGTCTTTACTTGATCC+AGG | - | chr3_4:1138024-1138043 | None:intergenic | 40.0% | |
| CTGGATCAAGTAAAGACTCT+AGG | + | chr3_4:1138022-1138041 | Msa0484020:CDS | 40.0% | |
| TAGATGTAGCAGTAGCTTGA+CGG | - | chr3_4:1138051-1138070 | None:intergenic | 40.0% | |
| TCAGTATGGGAATGTACATG+CGG | + | chr3_4:1138165-1138184 | Msa0484020:CDS | 40.0% | |
| GGGTCAGTCATCCTAAAATT+AGG | - | chr3_4:1138259-1138278 | None:intergenic | 40.0% | |
| !!! | ATGTCTTTTTCAGGAGCTAG+AGG | + | chr3_4:1138298-1138317 | Msa0484020:CDS | 40.0% |
| TCTCAAGTGCACCAATTAGT+CGG | + | chr3_4:1138328-1138347 | Msa0484020:CDS | 40.0% | |
| ATCCTCTCATTCCGACTAAT+TGG | - | chr3_4:1138342-1138361 | None:intergenic | 40.0% | |
| GGATTAATGTCAGATCCACA+AGG | + | chr3_4:1138358-1138377 | Msa0484020:CDS | 40.0% | |
| ACGTATTCCTACAGGTAAAG+GGG | - | chr3_4:1138771-1138790 | None:intergenic | 40.0% | |
| GACGTATTCCTACAGGTAAA+GGG | - | chr3_4:1138772-1138791 | None:intergenic | 40.0% | |
| AGACGTATTCCTACAGGTAA+AGG | - | chr3_4:1138773-1138792 | None:intergenic | 40.0% | |
| TTACCTGTAGGAATACGTCT+TGG | + | chr3_4:1138773-1138792 | Msa0484020:CDS | 40.0% | |
| GAAGCTGTAGGTATTATTGC+TGG | + | chr3_4:1138853-1138872 | Msa0484020:CDS | 40.0% | |
| ! | ATACTGGTGGAGTATTCACA+GGG | + | chr3_4:1138923-1138942 | Msa0484020:CDS | 40.0% |
| ! | TAAAAGTATATGTTCCCGCG+CGG | - | chr3_4:1139179-1139198 | None:intergenic | 40.0% |
| CCTTCTTGAATCGATTGGAA+TGG | - | chr3_4:1139642-1139661 | None:intergenic | 40.0% | |
| ! | CCATTCCAATCGATTCAAGA+AGG | + | chr3_4:1139639-1139658 | Msa0484020:CDS | 40.0% |
| ACCCGAATCTTCTTCCATAA+TGG | + | chr3_4:1139926-1139945 | Msa0484020:intron | 40.0% | |
| GTACGGAATAATAGTCTCGT+TGG | + | chr3_4:1139948-1139967 | Msa0484020:intron | 40.0% | |
| AGTTCTATCTTGATACCACC+CGG | + | chr3_4:1140113-1140132 | Msa0484020:intron | 40.0% | |
| !!! | TTTTTTTTTACCGTTCCGGG+TGG | - | chr3_4:1140131-1140150 | None:intergenic | 40.0% |
| ! | TCTTGGTAGTTGTGATCCAT+TGG | - | chr3_4:1140193-1140212 | None:intergenic | 40.0% |
| ! | TTTTCCCCAAGATCTATTCC+AGG | + | chr3_4:1140283-1140302 | Msa0484020:intron | 40.0% |
| CTTTCCTGGAATAGATCTTG+GGG | - | chr3_4:1140290-1140309 | None:intergenic | 40.0% | |
| CTCTTTCCTGGAATAGATCT+TGG | - | chr3_4:1140292-1140311 | None:intergenic | 40.0% | |
| GTTCCAGATTATCTCTTTCC+TGG | - | chr3_4:1140304-1140323 | None:intergenic | 40.0% | |
| TACTTCAACAAAGGAAGAGG+GGG | - | chr3_4:1140461-1140480 | None:intergenic | 40.0% | |
| ! | AGAAATGACCCATCTGGTTT+AGG | + | chr3_4:1140552-1140571 | Msa0484020:intron | 40.0% |
| CGATCAATCCTAAACCAGAT+GGG | - | chr3_4:1140563-1140582 | None:intergenic | 40.0% | |
| ! | ATCTGGTTTAGGATTGATCG+CGG | + | chr3_4:1140563-1140582 | Msa0484020:intron | 40.0% |
| GAAATAAGGAATGCCGATCT+TGG | + | chr3_4:1140697-1140716 | Msa0484020:intron | 40.0% | |
| TTCTCCATAATGGCCATGAA+TGG | - | chr3_4:1141242-1141261 | None:intergenic | 40.0% | |
| AGATCCGGTGATATAACACA+AGG | + | chr3_4:1141310-1141329 | Msa0484020:CDS | 40.0% | |
| AACACAAGGTCTTCCAAAAG+TGG | + | chr3_4:1141324-1141343 | Msa0484020:CDS | 40.0% | |
| AAGAATTCTCGGCATTCCTT+GGG | + | chr3_4:1141429-1141448 | Msa0484020:CDS | 40.0% | |
| ATTCCTTGGGGATTCTTGAT+TGG | + | chr3_4:1141442-1141461 | Msa0484020:CDS | 40.0% | |
| AGCGCAAAGTCGTATTTCTT+TGG | + | chr3_4:1141480-1141499 | Msa0484020:CDS | 40.0% | |
| TCCAAAAGGTTTATCGATCC+AGG | + | chr3_4:1141511-1141530 | Msa0484020:CDS | 40.0% | |
| CCAAAAGGTTTATCGATCCA+GGG | + | chr3_4:1141512-1141531 | Msa0484020:CDS | 40.0% | |
| ATAATCGGTCTCAATTCGGG+AGG | - | chr3_4:1136492-1136511 | None:intergenic | 45.0% | |
| !! | CTCCTTGATAATGGAATCCG+CGG | + | chr3_4:1136675-1136694 | Msa0484020:CDS | 45.0% |
| AGATTTCGAGAGACTCTGCT+TGG | + | chr3_4:1136768-1136787 | Msa0484020:CDS | 45.0% | |
| !! | AGCTCTATTGCTATTTCGCG+GGG | - | chr3_4:1136867-1136886 | None:intergenic | 45.0% |
| AGCGCCTACTTTGCATAGAT+TGG | + | chr3_4:1137034-1137053 | Msa0484020:CDS | 45.0% | |
| GCGCCTACTTTGCATAGATT+GGG | + | chr3_4:1137035-1137054 | Msa0484020:CDS | 45.0% | |
| GCTTGAGCCTCCAAAGATAA+AGG | - | chr3_4:1137173-1137192 | None:intergenic | 45.0% | |
| TTAACTAGCGGAAATCGTCG+AGG | + | chr3_4:1137296-1137315 | Msa0484020:CDS | 45.0% | |
| ! | GTCGAGGTATTTGTGCAAAC+AGG | + | chr3_4:1137312-1137331 | Msa0484020:intron | 45.0% |
| !!! | TCGATAGTCCTTTTTGGCTC+CGG | + | chr3_4:1137471-1137490 | Msa0484020:intron | 45.0% |
| ! | TGCATTGATCTATTCGCCAC+CGG | - | chr3_4:1137493-1137512 | None:intergenic | 45.0% |
| GAATCCCACTGAGTGGAATA+TGG | + | chr3_4:1137877-1137896 | Msa0484020:intron | 45.0% | |
| ACCTCCATATTCCACTCAGT+GGG | - | chr3_4:1137884-1137903 | None:intergenic | 45.0% | |
| TACCTCCATATTCCACTCAG+TGG | - | chr3_4:1137885-1137904 | None:intergenic | 45.0% | |
| !! | TGGAGGTACTTATGGCAGAA+CGG | + | chr3_4:1137897-1137916 | Msa0484020:intron | 45.0% |
| GGCATATACATCACACATCC+TGG | + | chr3_4:1138003-1138022 | Msa0484020:CDS | 45.0% | |
| !! | TGGACTAGCCATCCTTTAGA+AGG | - | chr3_4:1138106-1138125 | None:intergenic | 45.0% |
| CACCAATTAGTCGGAATGAG+AGG | + | chr3_4:1138337-1138356 | Msa0484020:CDS | 45.0% | |
| AGTATCCACAACCCCTTTAC+GGG | - | chr3_4:1138464-1138483 | None:intergenic | 45.0% | |
| CAGTATCCACAACCCCTTTA+CGG | - | chr3_4:1138465-1138484 | None:intergenic | 45.0% | |
| !! | TACACGTCGACTTGTTGAAG+TGG | + | chr3_4:1138513-1138532 | Msa0484020:CDS | 45.0% |
| GTTGTACGTCGAACAGATTG+CGG | + | chr3_4:1138547-1138566 | Msa0484020:CDS | 45.0% | |
| CGTATTCCTACAGGTAAAGG+GGG | - | chr3_4:1138770-1138789 | None:intergenic | 45.0% | |
| GATCCAAGACGTATTCCTAC+AGG | - | chr3_4:1138779-1138798 | None:intergenic | 45.0% | |
| ! | TGGATCTGCCGATTGTGTTA+TGG | + | chr3_4:1138793-1138812 | Msa0484020:CDS | 45.0% |
| ! | GGATCTGCCGATTGTGTTAT+GGG | + | chr3_4:1138794-1138813 | Msa0484020:CDS | 45.0% |
| GTAGAATTGGGAGAAGCTGT+AGG | + | chr3_4:1138841-1138860 | Msa0484020:CDS | 45.0% | |
| TGGTCAATCTATTGGCGAAC+CGG | + | chr3_4:1138873-1138892 | Msa0484020:CDS | 45.0% | |
| ! | CATACTGGTGGAGTATTCAC+AGG | + | chr3_4:1138922-1138941 | Msa0484020:CDS | 45.0% |
| ! | TACTGGTGGAGTATTCACAG+GGG | + | chr3_4:1138924-1138943 | Msa0484020:CDS | 45.0% |
| ATCCATGACGTGTACGTGTA+GGG | - | chr3_4:1139014-1139033 | None:intergenic | 45.0% | |
| TATCCATGACGTGTACGTGT+AGG | - | chr3_4:1139015-1139034 | None:intergenic | 45.0% | |
| ACTCAGAAGGCGAAATGCAT+TGG | + | chr3_4:1139235-1139254 | Msa0484020:CDS | 45.0% | |
| TTCGGATGCATGGTACACAT+CGG | - | chr3_4:1139265-1139284 | None:intergenic | 45.0% | |
| TCTTATCAGGAAAGTCGTGC+AGG | + | chr3_4:1139334-1139353 | Msa0484020:CDS | 45.0% | |
| AACGAACTAATGCGACCTTC+TGG | + | chr3_4:1139666-1139685 | Msa0484020:CDS | 45.0% | |
| ! | ATATCCATTTTCCCGGAGAG+AGG | + | chr3_4:1140072-1140091 | Msa0484020:intron | 45.0% |
| ! | TATCCATTTTCCCGGAGAGA+GGG | + | chr3_4:1140073-1140092 | Msa0484020:intron | 45.0% |
| GATATCTTATCCCTCTCTCC+GGG | - | chr3_4:1140086-1140105 | None:intergenic | 45.0% | |
| GGATATCTTATCCCTCTCTC+CGG | - | chr3_4:1140087-1140106 | None:intergenic | 45.0% | |
| TATCTTGATACCACCCGGAA+CGG | + | chr3_4:1140118-1140137 | Msa0484020:intron | 45.0% | |
| TTGTGTCGGAAATTCCCGAA+TGG | - | chr3_4:1140366-1140385 | None:intergenic | 45.0% | |
| ATTCGGGAATTTCCGACACA+AGG | + | chr3_4:1140365-1140384 | Msa0484020:intron | 45.0% | |
| GCGATCAATCCTAAACCAGA+TGG | - | chr3_4:1140564-1140583 | None:intergenic | 45.0% | |
| TCGCGGATAATGAATCGGAT+CGG | + | chr3_4:1140580-1140599 | Msa0484020:intron | 45.0% | |
| TAACCATATTTGGCGACTCC+AGG | + | chr3_4:1141211-1141230 | Msa0484020:intron | 45.0% | |
| GCAACCATTCATGGCCATTA+TGG | + | chr3_4:1141235-1141254 | Msa0484020:CDS | 45.0% | |
| CAAGAATTCTCGGCATTCCT+TGG | + | chr3_4:1141428-1141447 | Msa0484020:CDS | 45.0% | |
| AGAATTCTCGGCATTCCTTG+GGG | + | chr3_4:1141430-1141449 | Msa0484020:CDS | 45.0% | |
| ! | CCCTGGATCGATAAACCTTT+TGG | - | chr3_4:1141515-1141534 | None:intergenic | 45.0% |
| !! | AATGAATTATTATTATTAAT+TGG | - | chr3_4:1140810-1140829 | None:intergenic | 5.0% |
| !! | ATTAATAATAATAATTCATT+AGG | + | chr3_4:1140810-1140829 | Msa0484020:intron | 5.0% |
| CTCAATTCGGGAGGAAGAAC+TGG | - | chr3_4:1136483-1136502 | None:intergenic | 50.0% | |
| GTCCGCGGATTCCATTATCA+AGG | - | chr3_4:1136680-1136699 | None:intergenic | 50.0% | |
| AATCCGCGGACAACCAATGA+GGG | + | chr3_4:1136689-1136708 | Msa0484020:CDS | 50.0% | |
| GGGCGTTCTGTTATTGTCGT+AGG | + | chr3_4:1136810-1136829 | Msa0484020:CDS | 50.0% | |
| GGCGCTCTATTCAGCAATAC+TGG | - | chr3_4:1137020-1137039 | None:intergenic | 50.0% | |
| AACCTCTTGTCTCCGGCTAT+TGG | + | chr3_4:1137224-1137243 | Msa0484020:CDS | 50.0% | |
| ACCTCTTGTCTCCGGCTATT+GGG | + | chr3_4:1137225-1137244 | Msa0484020:CDS | 50.0% | |
| GAAATGGGATCCCCAATAGC+CGG | - | chr3_4:1137239-1137258 | None:intergenic | 50.0% | |
| !!! | ATAGTCCTTTTTGGCTCCGG+TGG | + | chr3_4:1137474-1137493 | Msa0484020:intron | 50.0% |
| TCCCACTGAGTGGAATATGG+AGG | + | chr3_4:1137880-1137899 | Msa0484020:intron | 50.0% | |
| !! | GGAGGTACTTATGGCAGAAC+GGG | + | chr3_4:1137898-1137917 | Msa0484020:intron | 50.0% |
| GCTGTACGAACATCAGATGC+TGG | + | chr3_4:1138484-1138503 | Msa0484020:CDS | 50.0% | |
| ACAGATTGCGGTACGATTCG+CGG | + | chr3_4:1138559-1138578 | Msa0484020:CDS | 50.0% | |
| TTCGAACCCCCTTTACCTGT+AGG | + | chr3_4:1138761-1138780 | Msa0484020:CDS | 50.0% | |
| ! | TCTGCCGATTGTGTTATGGG+CGG | + | chr3_4:1138797-1138816 | Msa0484020:CDS | 50.0% |
| GACTCCGCCCATAACACAAT+CGG | - | chr3_4:1138804-1138823 | None:intergenic | 50.0% | |
| TATGGGCGGAGTCCTATTCA+TGG | + | chr3_4:1138811-1138830 | Msa0484020:CDS | 50.0% | |
| ATGGGCGGAGTCCTATTCAT+GGG | + | chr3_4:1138812-1138831 | Msa0484020:CDS | 50.0% | |
| TCTACCAGGTCCCCATGAAT+AGG | - | chr3_4:1138826-1138845 | None:intergenic | 50.0% | |
| TCATGGGGACCTGGTAGAAT+TGG | + | chr3_4:1138828-1138847 | Msa0484020:CDS | 50.0% | |
| CATGGGGACCTGGTAGAATT+GGG | + | chr3_4:1138829-1138848 | Msa0484020:CDS | 50.0% | |
| CAGCTTCTCCCAATTCTACC+AGG | - | chr3_4:1138840-1138859 | None:intergenic | 50.0% | |
| GGTCAATCTATTGGCGAACC+GGG | + | chr3_4:1138874-1138893 | Msa0484020:CDS | 50.0% | |
| ! | ACTGGTGGAGTATTCACAGG+GGG | + | chr3_4:1138925-1138944 | Msa0484020:CDS | 50.0% |
| !! | AGTATTCACAGGGGGTACTG+CGG | + | chr3_4:1138933-1138952 | Msa0484020:CDS | 50.0% |
| AAGAAGTCGAGTAGGCGGAT+TGG | + | chr3_4:1139998-1140017 | Msa0484020:intron | 50.0% | |
| TATCCCTCTCTCCGGGAAAA+TGG | - | chr3_4:1140079-1140098 | None:intergenic | 50.0% | |
| !! | CTTGACGGGCTATCCCTAAA+GGG | - | chr3_4:1140836-1140855 | None:intergenic | 50.0% |
| !! | ACTTGACGGGCTATCCCTAA+AGG | - | chr3_4:1140837-1140856 | None:intergenic | 50.0% |
| TTAGGGATAGCCCGTCAAGT+TGG | + | chr3_4:1140837-1140856 | Msa0484020:intron | 50.0% | |
| ACTCCAGGAGCAACCATTCA+TGG | + | chr3_4:1141226-1141245 | Msa0484020:intron | 50.0% | |
| GCACCAATCAAGAATCCCCA+AGG | - | chr3_4:1141448-1141467 | None:intergenic | 50.0% | |
| GAATCCGCGGACAACCAATG+AGG | + | chr3_4:1136688-1136707 | Msa0484020:CDS | 55.0% | |
| CCTCTTGTCTCCGGCTATTG+GGG | + | chr3_4:1137226-1137245 | Msa0484020:CDS | 55.0% | |
| ATTCGCCACCGGAGCCAAAA+AGG | - | chr3_4:1137482-1137501 | None:intergenic | 55.0% | |
| TCGAACCGAATCCCACTGAG+TGG | + | chr3_4:1137870-1137889 | Msa0484020:intron | 55.0% | |
| TCTTGCTACGGAGCCCGTAA+AGG | + | chr3_4:1138448-1138467 | Msa0484020:CDS | 55.0% | |
| CTTGCTACGGAGCCCGTAAA+GGG | + | chr3_4:1138449-1138468 | Msa0484020:CDS | 55.0% | |
| TTGCTACGGAGCCCGTAAAG+GGG | + | chr3_4:1138450-1138469 | Msa0484020:CDS | 55.0% | |
| CAGATTGCGGTACGATTCGC+GGG | + | chr3_4:1138560-1138579 | Msa0484020:CDS | 55.0% | |
| TGGGCGGAGTCCTATTCATG+GGG | + | chr3_4:1138813-1138832 | Msa0484020:CDS | 55.0% | |
| GAGTCCTATTCATGGGGACC+TGG | + | chr3_4:1138819-1138838 | Msa0484020:CDS | 55.0% | |
| CACCCTACACGTACACGTCA+TGG | + | chr3_4:1139009-1139028 | Msa0484020:CDS | 55.0% | |
| AGTGATTGCTGAGATCCGCG+CGG | + | chr3_4:1139161-1139180 | Msa0484020:CDS | 55.0% | |
| GCTCCTGGAGTCGCCAAATA+TGG | - | chr3_4:1141217-1141236 | None:intergenic | 55.0% | |
| TGGCCATGAATGGTTGCTCC+TGG | - | chr3_4:1141232-1141251 | None:intergenic | 55.0% | |
| ! | CGTCCCTCATTGGTTGTCCG+CGG | - | chr3_4:1136695-1136714 | None:intergenic | 60.0% |
| CGCGGACAACCAATGAGGGA+CGG | + | chr3_4:1136693-1136712 | Msa0484020:CDS | 60.0% | |
| CCCCAATAGCCGGAGACAAG+AGG | - | chr3_4:1137229-1137248 | None:intergenic | 60.0% | |
| TATGTGCGAGCCCCCTCGAA+TGG | + | chr3_4:1138958-1138977 | Msa0484020:CDS | 60.0% | |
| GTGATTGCTGAGATCCGCGC+GGG | + | chr3_4:1139162-1139181 | Msa0484020:CDS | 60.0% | |
| CGGAGCCCGTAAAGGGGTTG+TGG | + | chr3_4:1138456-1138475 | Msa0484020:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 1136462 | 1141549 | 1136462 | ID=Msa0484020;Name=Msa0484020 |
| chr3_4 | mRNA | 1136462 | 1141549 | 1136462 | ID=Msa0484020-mRNA-1;Parent=Msa0484020;Name=Msa0484020-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|3|0|990 |
| chr3_4 | exon | 1136462 | 1137317 | 1136462 | ID=Msa0484020-mRNA-1:exon:313;Parent=Msa0484020-mRNA-1 |
| chr3_4 | exon | 1137915 | 1139714 | 1137915 | ID=Msa0484020-mRNA-1:exon:314;Parent=Msa0484020-mRNA-1 |
| chr3_4 | exon | 1141233 | 1141549 | 1141233 | ID=Msa0484020-mRNA-1:exon:315;Parent=Msa0484020-mRNA-1 |
| chr3_4 | CDS | 1136462 | 1137317 | 1136462 | ID=Msa0484020-mRNA-1:cds;Parent=Msa0484020-mRNA-1 |
| chr3_4 | CDS | 1137915 | 1139714 | 1137915 | ID=Msa0484020-mRNA-1:cds;Parent=Msa0484020-mRNA-1 |
| chr3_4 | CDS | 1141233 | 1141549 | 1141233 | ID=Msa0484020-mRNA-1:cds;Parent=Msa0484020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
