AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1394040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1394040 MtrunA17_Chr4g0015651 80.471 425 4 5 185 530 7 431 0.0 639
Msa1394040 MtrunA17_Chr4g0016741 80.471 425 4 5 185 530 7 431 0.0 639
Msa1394040 MtrunA17_CPg0492941 80.471 425 4 5 185 530 7 431 0.0 639
Msa1394040 MtrunA17_MTg0490471 54.042 433 111 6 186 530 9 441 6.08e-140 414
Msa1394040 MtrunA17_Chr2g0278821 84.656 189 15 2 356 530 24 212 8.51e-105 316
Msa1394040 MtrunA17_Chr2g0286451 65.574 183 8 2 247 374 7 189 1.38e-67 216
Msa1394040 MtrunA17_Chr4g0040631 88.034 117 4 1 185 291 7 123 4.19e-59 192
Msa1394040 MtrunA17_CPg0492961 88.288 111 6 1 81 184 57 167 8.70e-58 190
Msa1394040 MtrunA17_Chr4g0016711 100.000 80 0 0 1 80 1 80 4.70e-46 155
Msa1394040 MtrunA17_CPg0492971 100.000 80 0 0 1 80 1 80 4.70e-46 155
Msa1394040 MtrunA17_Chr4g0015621 100.000 80 0 0 1 80 1 80 4.70e-46 155
Msa1394040 MtrunA17_Chr4g0061471 73.333 75 8 1 268 330 1 75 9.88e-28 106
Msa1394040 MtrunA17_Chr1g0211291 27.714 350 166 10 203 478 44 380 2.67e-20 94.0
Msa1394040 MtrunA17_Chr7g0250051 27.507 349 167 10 203 478 43 378 6.81e-20 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1394040 ATCG00120.1 77.647 425 16 5 185 530 7 431 0.0 619
Msa1394040 ATMG01190.1 51.039 433 124 6 186 530 9 441 9.37e-131 390
Msa1394040 AT2G07698.1 49.260 473 150 7 148 530 239 711 2.59e-129 395
Msa1394040 ATCG00130.1 64.493 138 41 2 55 185 34 170 1.95e-46 160
Msa1394040 ATCG00140.1 96.250 80 3 0 1 80 1 80 5.62e-44 150
Msa1394040 AT4G38510.5 27.794 349 166 10 203 478 50 385 3.67e-21 97.1
Msa1394040 AT4G38510.1 27.794 349 166 10 203 478 43 378 4.35e-21 96.7
Msa1394040 AT4G38510.3 27.794 349 166 10 203 478 43 378 4.35e-21 96.7
Msa1394040 AT4G38510.4 27.794 349 166 10 203 478 43 378 4.35e-21 96.7
Msa1394040 AT4G38510.2 27.794 349 166 10 203 478 43 378 4.35e-21 96.7
Msa1394040 AT1G76030.1 28.378 296 140 7 255 478 82 377 7.74e-20 92.8
Msa1394040 AT1G20260.1 36.000 125 79 1 355 478 254 378 8.82e-15 77.4

Find 124 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAGCTTTAACTATTTA+TGG 0.037973 tig0021785:+2379 Msa1394040:CDS
ACCAGTAAGTGAGGGTTATT+TGG 0.166311 tig0021785:+4619 Msa1394040:CDS
TGTAGGCATTGCTTTGAATT+TGG 0.201612 tig0021785:+4505 Msa1394040:CDS
CCCAAATAACCCTCACTTAC+TGG 0.241036 tig0021785:-4620 None:intergenic
TTATTTACATTCTCGTCTTT+TGG 0.245014 tig0021785:+5201 Msa1394040:CDS
AAATGTTGGTGTTGTATTAA+TGG 0.258988 tig0021785:+4535 Msa1394040:CDS
GGCCAGCGAGAATTAATTAT+TGG 0.267680 tig0021785:+4812 Msa1394040:CDS
CGGAAGCAGAGGACAAAATA+AGG 0.270738 tig0021785:+2329 Msa1394040:CDS
GGTAGCTGGTAAATTAAAAT+TGG 0.278592 tig0021785:+5459 Msa1394040:intron
TCTCGCTGGCCACGCCCTAT+AGG 0.298734 tig0021785:-4800 None:intergenic
GCCGTCGGGCTTGCTTCTAT+TGG 0.311843 tig0021785:+2247 Msa1394040:CDS
GCTGCTTCTGTTATCGCTGC+TGG 0.315135 tig0021785:+2220 Msa1394040:CDS
TGGAAGCTTTAACTATTTAT+GGG 0.316470 tig0021785:+2380 Msa1394040:CDS
CTCGCTGGCCACGCCCTATA+GGG 0.318797 tig0021785:-4799 None:intergenic
CTACTTTCCTTAAGCGGGCC+CGG 0.340021 tig0021785:-3927 None:intergenic
ATTGATTCTATGATCCCTAT+AGG 0.359827 tig0021785:+4785 Msa1394040:CDS
GCTGCAGGGCAAGCTGTAGA+AGG 0.363265 tig0021785:+2292 Msa1394040:CDS
GCGATAAGCCTGTGCTTGTT+TGG 0.364708 tig0021785:-5119 None:intergenic
GCCAGCGAGAATTAATTATT+GGG 0.365780 tig0021785:+4813 Msa1394040:CDS
GGGTACTTTATTACTTAGTC+TGG 0.366228 tig0021785:+2351 Msa1394040:CDS
CCTGATTGGGTCTCAACTAT+TGG 0.368964 tig0021785:-5277 None:intergenic
TGGTAAATTAAAATTGGAAT+TGG 0.382867 tig0021785:+5465 Msa1394040:CDS
CACAGTGAGAGGAGCTGATT+GGG 0.383779 tig0021785:-5596 None:intergenic
TAATTCAATTTATACAACTT+TGG 0.388293 tig0021785:+4018 Msa1394040:CDS
ATTTCTCCTCGACCATCAAT+AGG 0.391542 tig0021785:-4668 None:intergenic
AATGTTGGTGTTGTATTAAT+GGG 0.391664 tig0021785:+4536 Msa1394040:CDS
TCCTTATACAGGTGCAGCTC+TGG 0.392160 tig0021785:+5042 Msa1394040:intron
GCCCTAGCTAAACCTATTGA+TGG 0.393369 tig0021785:+4656 Msa1394040:CDS
CCAATAGTTGAGACCCAATC+AGG 0.395916 tig0021785:+5277 Msa1394040:CDS
AGATACAATTCTCAATCAAC+AGG 0.401486 tig0021785:+4868 Msa1394040:CDS
CCGGGATACGCTTCGCGACC+TGG 0.409309 tig0021785:-5169 None:intergenic
AAGCTGAAACATCTCCTGAT+TGG 0.409535 tig0021785:-5291 None:intergenic
AGAAAGCCCGGGCCCGCTTA+AGG 0.414131 tig0021785:+3920 Msa1394040:CDS
GCTAAATTAAGTTCTCAGTT+AGG 0.415873 tig0021785:+5232 Msa1394040:CDS
GCTTCTATTGGACCTGGAGT+TGG 0.416315 tig0021785:+2259 Msa1394040:CDS
CCAGTAAGTGAGGGTTATTT+GGG 0.424091 tig0021785:+4620 Msa1394040:CDS
ATTATTGGGGACAGACAAAC+AGG 0.427629 tig0021785:+4827 Msa1394040:CDS
TCGCTGCTGGGTTGGCCGTC+GGG 0.427770 tig0021785:+2233 Msa1394040:CDS
ATCGCTGCTGGGTTGGCCGT+CGG 0.428270 tig0021785:+2232 Msa1394040:CDS
AAATATTTGGCCATCTGTAA+TGG 0.434228 tig0021785:-5335 None:intergenic
TTGATTCTATGATCCCTATA+GGG 0.437674 tig0021785:+4786 Msa1394040:CDS
CCACAGTGAGAGGAGCTGAT+TGG 0.438205 tig0021785:-5597 None:intergenic
GTAATGGAAATTACATTAGT+AGG 0.444650 tig0021785:-5319 None:intergenic
CGTTTCTACTTTCCTTAAGC+GGG 0.444690 tig0021785:-3932 None:intergenic
ATATGTGTTTATGTAGCTAT+TGG 0.445393 tig0021785:+4902 Msa1394040:CDS
TAAAGCTACGCAAAATCAAT+TGG 0.449089 tig0021785:+5537 Msa1394040:CDS
TTCAAAATTCAGAAGAACTA+CGG 0.449969 tig0021785:+3875 Msa1394040:CDS
GGAAGCAGCCGTTGAACAGC+TGG 0.450450 tig0021785:+3897 Msa1394040:CDS
ACAAGCATTACAAGGAGCTC+TGG 0.452163 tig0021785:+4123 Msa1394040:CDS
TTCGTAATAGAAGAGACATT+TGG 0.452176 tig0021785:-5141 None:intergenic
AGCTGAAACATCTCCTGATT+GGG 0.452206 tig0021785:-5290 None:intergenic
GGAAGTTCGGTAAAAGCAAC+AGG 0.457398 tig0021785:+4581 Msa1394040:CDS
AAAAGATTAAACAAAAGGAT+TGG 0.459809 tig0021785:-2431 None:intergenic
AGCTTTAACTATTTATGGGC+TGG 0.460263 tig0021785:+2384 Msa1394040:CDS
CTGCTTCTGTTATCGCTGCT+GGG 0.461552 tig0021785:+2221 Msa1394040:CDS
TACTTTCCTTAAGCGGGCCC+GGG 0.461743 tig0021785:-3926 None:intergenic
ATAAGCCTGTGCTTGTTTGG+AGG 0.462375 tig0021785:-5116 None:intergenic
CGTGTATGAGCCTCTTCAAA+CGG 0.465005 tig0021785:+4751 Msa1394040:CDS
TTGAACAGCTGGAGAAAGCC+CGG 0.472109 tig0021785:+3908 Msa1394040:CDS
GGAAGCAGAGGACAAAATAA+GGG 0.473459 tig0021785:+2330 Msa1394040:CDS
AGAAGGGATTGCGCGACAAC+CGG 0.475077 tig0021785:+2309 Msa1394040:CDS
TCGAGGAGAAATTTCAGCTT+CGG 0.476522 tig0021785:+4679 Msa1394040:CDS
CCAGGTCGCGAAGCGTATCC+CGG 0.478786 tig0021785:+5169 Msa1394040:CDS
GGGCTTGCTTCTATTGGACC+TGG 0.481695 tig0021785:+2253 Msa1394040:CDS
TAACTGAGAACTTAATTTAG+CGG 0.485288 tig0021785:-5230 None:intergenic
CGCCGATCCAACTCTGGAAA+CGG 0.485937 tig0021785:-5413 None:intergenic
TATATTGCTCAATACGTTCA+CGG 0.487151 tig0021785:-4364 None:intergenic
AAATTTCAGCTTCGGAATCT+CGG 0.492871 tig0021785:+4687 Msa1394040:CDS
GTTGGTCAAGGTACAGCTGC+AGG 0.497139 tig0021785:+2277 Msa1394040:CDS
GGTGTTGTATTAATGGGTGA+TGG 0.501676 tig0021785:+4542 Msa1394040:CDS
GGCTTTCTCCAGCTGTTCAA+CGG 0.504402 tig0021785:-3905 None:intergenic
TCTGCCGATCTATTCAATGC+TGG 0.509351 tig0021785:+5361 Msa1394040:CDS
GCTGATACAAGAGGGAAGTT+CGG 0.510716 tig0021785:+4568 Msa1394040:CDS
TCAAAATTCAGAAGAACTAC+GGG 0.510719 tig0021785:+3876 Msa1394040:CDS
GTGTATGAGCCTCTTCAAAC+GGG 0.511475 tig0021785:+4752 Msa1394040:CDS
TTCTGTTATCGCTGCTGGGT+TGG 0.514112 tig0021785:+2225 Msa1394040:CDS
TGATTAAAGTGTGACGTTCA+CGG 0.516487 tig0021785:-5081 None:intergenic
CCGTTTCTACTTTCCTTAAG+CGG 0.521089 tig0021785:-3933 None:intergenic
TAAGCCTGTGCTTGTTTGGA+GGG 0.526272 tig0021785:-5115 None:intergenic
GAAATACCCACATTAATAGC+TGG 0.538501 tig0021785:-5391 None:intergenic
CCCCAATAATTAATTCTCGC+TGG 0.539649 tig0021785:-4814 None:intergenic
GACCATCAATAGGTTTAGCT+AGG 0.542268 tig0021785:-4658 None:intergenic
ATTGGACCTGGAGTTGGTCA+AGG 0.543278 tig0021785:+2265 Msa1394040:CDS
ATCTGTTCTTCCACAGTGAG+AGG 0.551959 tig0021785:-5607 None:intergenic
TGCGCGACAACCGGAAGCAG+AGG 0.554171 tig0021785:+2318 Msa1394040:CDS
AATGTAATTTCCATTACAGA+TGG 0.557336 tig0021785:+5325 Msa1394040:CDS
AAAGCCATGAAACAGGTAGC+TGG 0.558354 tig0021785:+5445 Msa1394040:intron
CAAGCATTACAAGGAGCTCT+GGG 0.568354 tig0021785:+4124 Msa1394040:CDS
AAGTAGAAACGGAAGCGGAT+CGG 0.570689 tig0021785:+3944 Msa1394040:CDS
CCGCTTAAGGAAAGTAGAAA+CGG 0.573518 tig0021785:+3933 Msa1394040:CDS
CGATCCCTCCAAACAAGCAC+AGG 0.574680 tig0021785:+5111 Msa1394040:CDS
TGAACAGCTGGAGAAAGCCC+GGG 0.575165 tig0021785:+3909 Msa1394040:CDS
TGCTCAGATACCAGTAAGTG+AGG 0.577261 tig0021785:+4610 Msa1394040:CDS
TGAATTAGTCGAATTTGAAG+AGG 0.580561 tig0021785:+4478 Msa1394040:CDS
CTGCAGGGCAAGCTGTAGAA+GGG 0.582070 tig0021785:+2293 Msa1394040:CDS
GCAATAAGTCCCGTTTGAAG+AGG 0.589598 tig0021785:-4761 None:intergenic
ACAGGTACTGTACTTCAAGT+AGG 0.592569 tig0021785:+4410 Msa1394040:CDS
GCTGTACCTTGACCAACTCC+AGG 0.593501 tig0021785:-2271 None:intergenic
GAATTTGAAGAGGGTACTGT+AGG 0.593991 tig0021785:+4488 Msa1394040:CDS
CGATTAATCAAGTGCAACAG+AGG 0.596922 tig0021785:+4092 Msa1394040:CDS
CTTCTATTACGAAGACCACC+AGG 0.597315 tig0021785:+5151 Msa1394040:CDS
ACCATCAATAGGTTTAGCTA+GGG 0.601516 tig0021785:-4657 None:intergenic
ATCAGACCAGCTATTAATGT+GGG 0.604091 tig0021785:+5385 Msa1394040:CDS
GAGTTACATTTACGTACGAT+CGG 0.617220 tig0021785:+4172 Msa1394040:CDS
GAATTAGTCGAATTTGAAGA+GGG 0.619600 tig0021785:+4479 Msa1394040:CDS
GCTAAACCTATTGATGGTCG+AGG 0.620970 tig0021785:+4662 Msa1394040:CDS
AAGGAAAGTAGAAACGGAAG+CGG 0.622485 tig0021785:+3939 Msa1394040:CDS
AATCAGACCAGCTATTAATG+TGG 0.625394 tig0021785:+5384 Msa1394040:CDS
GATTCCAGCATTGAATAGAT+CGG 0.626418 tig0021785:-5365 None:intergenic
TCTATGATCCCTATAGGGCG+TGG 0.628110 tig0021785:+4791 Msa1394040:CDS
CCAGCGAGAATTAATTATTG+GGG 0.636830 tig0021785:+4814 Msa1394040:CDS
TCCAATAGAAGCAAGCCCGA+CGG 0.638086 tig0021785:-2248 None:intergenic
ACAGAAGCAGCAGAAATCAG+TGG 0.640161 tig0021785:-2208 None:intergenic
TTGGTCAAGGTACAGCTGCA+GGG 0.643472 tig0021785:+2278 Msa1394040:CDS
GATTAATCAAGTGCAACAGA+GGG 0.644246 tig0021785:+4093 Msa1394040:CDS
ACGCAAAATCAATTGGCAAG+AGG 0.645378 tig0021785:+5544 Msa1394040:CDS
CGTTTGAAGAGGCTCATACA+CGG 0.655862 tig0021785:-4750 None:intergenic
GAAGCAGAGGACAAAATAAG+GGG 0.658398 tig0021785:+2331 Msa1394040:CDS
GATGGTTTGCTGATACAAGA+GGG 0.671964 tig0021785:+4560 Msa1394040:CDS
GCTCAGATACCAGTAAGTGA+GGG 0.673181 tig0021785:+4611 Msa1394040:CDS
TGATGGTTTGCTGATACAAG+AGG 0.676056 tig0021785:+4559 Msa1394040:CDS
ACTGTACTTCAAGTAGGCGA+CGG 0.682410 tig0021785:+4416 Msa1394040:CDS
GGATACGCTTCGCGACCTGG+TGG 0.699302 tig0021785:-5166 None:intergenic
GATACAATTCTCAATCAACA+GGG 0.744742 tig0021785:+4869 Msa1394040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAAGATTAAACAAA+AGG - tig0021785:2439-2458 None:intergenic 10.0%
!! TCAATTCTAAATTAAATAAA+GGG - tig0021785:2660-2679 None:intergenic 10.0%
!! TTCAATTCTAAATTAAATAA+AGG - tig0021785:2661-2680 None:intergenic 10.0%
!! ACTAATTATGAATATAATAA+AGG - tig0021785:5887-5906 None:intergenic 10.0%
!! AATTCTAAATTAAATAAAGG+GGG - tig0021785:2658-2677 None:intergenic 15.0%
!! CAATTCTAAATTAAATAAAG+GGG - tig0021785:2659-2678 None:intergenic 15.0%
!! AATCAAAAAATCAAAAAACT+GGG + tig0021785:2923-2942 Msa1394040:intron 15.0%
!!! TGTATTAATTTTTTTTGGAA+AGG + tig0021785:3108-3127 Msa1394040:intron 15.0%
!!! GTATTAATTTTTTTTGGAAA+GGG + tig0021785:3109-3128 Msa1394040:intron 15.0%
!! ATAAATTAATCAGAATTCTT+TGG + tig0021785:3549-3568 Msa1394040:intron 15.0%
!! CAATACAAGATTAAAATATT+TGG - tig0021785:3631-3650 None:intergenic 15.0%
!!! CAAATATTTTAATCTTGTAT+TGG + tig0021785:3629-3648 Msa1394040:intron 15.0%
!! TAATTCAATTTATACAACTT+TGG + tig0021785:4018-4037 Msa1394040:CDS 15.0%
!! TTCAAATTAAGAAATATTCA+TGG + tig0021785:4307-4326 Msa1394040:intron 15.0%
!!! TGTATTTACAATTTTTACTT+CGG - tig0021785:4393-4412 None:intergenic 15.0%
!! AAAAGATTAAACAAAAGGAT+TGG - tig0021785:2434-2453 None:intergenic 20.0%
!! ATAAATTGTAGGAGTTAAAT+CGG - tig0021785:2573-2592 None:intergenic 20.0%
!! TAGATTCTATATTCTCTAAT+TGG - tig0021785:2761-2780 None:intergenic 20.0%
!! GAATCAAAAAATCAAAAAAC+TGG + tig0021785:2922-2941 Msa1394040:intron 20.0%
!!! TAGATTTGTTGCTAAAATAT+CGG - tig0021785:3065-3084 None:intergenic 20.0%
!!! CTAGGTGTATTAATTTTTTT+TGG + tig0021785:3103-3122 Msa1394040:intron 20.0%
!! GTTTATTTCAAAGAATAGAT+TGG + tig0021785:3146-3165 Msa1394040:intron 20.0%
!! ATTCTGATTAATTTATACGT+AGG - tig0021785:3545-3564 None:intergenic 20.0%
!! TACAAGATTAAAATATTTGG+AGG - tig0021785:3628-3647 None:intergenic 20.0%
!! GAAGTAAAAATTGTAAATAC+AGG + tig0021785:4392-4411 Msa1394040:CDS 20.0%
!! ATGTAAATAAAAAACATCTC+CGG - tig0021785:5191-5210 None:intergenic 20.0%
!! TGGTAAATTAAAATTGGAAT+TGG + tig0021785:5465-5484 Msa1394040:CDS 20.0%
!! CAGATAATAACTATTTATAC+TGG + tig0021785:5625-5644 Msa1394040:intron 20.0%
!! GATATGATTTCGTTAAATTT+AGG - tig0021785:5736-5755 None:intergenic 20.0%
!! ATGGAAGCTTTAACTATTTA+TGG + tig0021785:2379-2398 Msa1394040:CDS 25.0%
!! TGGAAGCTTTAACTATTTAT+GGG + tig0021785:2380-2399 Msa1394040:CDS 25.0%
!!! AATACATATTGTTTTTTCCG+TGG + tig0021785:2473-2492 Msa1394040:intron 25.0%
! CCTACAATTTATTCTTCATT+CGG + tig0021785:2581-2600 Msa1394040:intron 25.0%
! AATGAAGCAAAGAAAAGAAT+CGG - tig0021785:3008-3027 None:intergenic 25.0%
!! TATAATGAAAAAAGTGCAGT+TGG - tig0021785:3178-3197 None:intergenic 25.0%
! TTTCTACCACTATGTTAATA+CGG + tig0021785:3392-3411 Msa1394040:intron 25.0%
! TTCTCTTTACGATGAAAAAT+AGG + tig0021785:3467-3486 Msa1394040:intron 25.0%
! TTTGCTGACAATTATTTGTT+TGG + tig0021785:3592-3611 Msa1394040:intron 25.0%
! TGTTTAGAAATAGAGAAAAG+AGG + tig0021785:3667-3686 Msa1394040:intron 25.0%
! CTCATTCGATAATAAAGATA+GGG + tig0021785:3695-3714 Msa1394040:intron 25.0%
! CATGAATCTTTCAATTCATT+TGG - tig0021785:3751-3770 None:intergenic 25.0%
! TGAATTGAAAGATTCATGTT+TGG + tig0021785:3753-3772 Msa1394040:intron 25.0%
! TTCAAAATTCAGAAGAACTA+CGG + tig0021785:3875-3894 Msa1394040:CDS 25.0%
!! AAATTTTTCTCGTTCTATCT+CGG - tig0021785:3989-4008 None:intergenic 25.0%
!! GATTCATTTTGAACAACAAA+GGG + tig0021785:4069-4088 Msa1394040:CDS 25.0%
! GTGCTAATATTGATATGTTT+GGG + tig0021785:4194-4213 Msa1394040:intron 25.0%
! TGCTAATATTGATATGTTTG+GGG + tig0021785:4195-4214 Msa1394040:intron 25.0%
! TCTACTAGAATATAGAGTAT+AGG + tig0021785:4249-4268 Msa1394040:intron 25.0%
!!! TGAATTTGATTCTTTTTCGA+AGG - tig0021785:4291-4310 None:intergenic 25.0%
!! AATTTGGAATCCAAAAATGT+TGG + tig0021785:4521-4540 Msa1394040:CDS 25.0%
!! TAATACAACACCAACATTTT+TGG - tig0021785:4534-4553 None:intergenic 25.0%
!!! AAATGTTGGTGTTGTATTAA+TGG + tig0021785:4535-4554 Msa1394040:CDS 25.0%
!!! AATGTTGGTGTTGTATTAAT+GGG + tig0021785:4536-4555 Msa1394040:CDS 25.0%
! ATATGTGTTTATGTAGCTAT+TGG + tig0021785:4902-4921 Msa1394040:CDS 25.0%
! TAACTACTTTACAAGAAAGA+GGG + tig0021785:4954-4973 Msa1394040:intron 25.0%
! TGTAAATAAAAAACATCTCC+GGG - tig0021785:5190-5209 None:intergenic 25.0%
!! TTATTTACATTCTCGTCTTT+TGG + tig0021785:5201-5220 Msa1394040:CDS 25.0%
! TAACTGAGAACTTAATTTAG+CGG - tig0021785:5233-5252 None:intergenic 25.0%
!! GTAATGGAAATTACATTAGT+AGG - tig0021785:5322-5341 None:intergenic 25.0%
! AATGTAATTTCCATTACAGA+TGG + tig0021785:5325-5344 Msa1394040:CDS 25.0%
! TGATTCATTAGAAATTGATC+AGG + tig0021785:5663-5682 Msa1394040:intron 25.0%
! TAAATTTCTCGTTGAGTTAA+GGG + tig0021785:5690-5709 Msa1394040:intron 25.0%
!!! ATTACTTAGTCTGGCTTTTA+TGG + tig0021785:2360-2379 Msa1394040:CDS 30.0%
CCGAATGAAGAATAAATTGT+AGG - tig0021785:2584-2603 None:intergenic 30.0%
AACTAGTATCTACTTCTAAG+AGG + tig0021785:2711-2730 Msa1394040:intron 30.0%
!! TAAGAGGTATCGTTCTTATA+GGG + tig0021785:2727-2746 Msa1394040:intron 30.0%
! CAAATTAGTCTATCCATAAG+AGG + tig0021785:2957-2976 Msa1394040:intron 30.0%
! CTTTTCTTTGCTTCATTTAC+TGG + tig0021785:3011-3030 Msa1394040:intron 30.0%
ATAAATCTAAGTGTAGTGCT+AGG + tig0021785:3085-3104 Msa1394040:intron 30.0%
! TCTCTATCAACCAAGAATTT+TGG + tig0021785:3314-3333 Msa1394040:intron 30.0%
CAATTTCCGTATTAACATAG+TGG - tig0021785:3401-3420 None:intergenic 30.0%
CACTATGTTAATACGGAAAT+TGG + tig0021785:3399-3418 Msa1394040:intron 30.0%
CGATGAAAAATAGGAAAAAC+AGG + tig0021785:3476-3495 Msa1394040:intron 30.0%
TCAATTCCGCATTGTATAAA+AGG - tig0021785:3519-3538 None:intergenic 30.0%
AGAAATAGAGAAAAGAGGAT+AGG + tig0021785:3672-3691 Msa1394040:intron 30.0%
GCTCATTCGATAATAAAGAT+AGG + tig0021785:3694-3713 Msa1394040:intron 30.0%
AGATAGGGAAATTTCCTATA+CGG + tig0021785:3710-3729 Msa1394040:intron 30.0%
TGAAAGATTCATGTTTGGTT+CGG + tig0021785:3758-3777 Msa1394040:intron 30.0%
TCAAAATTCAGAAGAACTAC+GGG + tig0021785:3876-3895 Msa1394040:CDS 30.0%
! CGATTCATTTTGAACAACAA+AGG + tig0021785:4068-4087 Msa1394040:CDS 30.0%
! GTTTTACAACAAGCATTACA+AGG + tig0021785:4115-4134 Msa1394040:CDS 30.0%
GGTGCTAATATTGATATGTT+TGG + tig0021785:4193-4212 Msa1394040:intron 30.0%
TATATTGCTCAATACGTTCA+CGG - tig0021785:4367-4386 None:intergenic 30.0%
! TTATGGTCTTGATGAAGTAA+TGG + tig0021785:4451-4470 Msa1394040:intron 30.0%
TGAATTAGTCGAATTTGAAG+AGG + tig0021785:4478-4497 Msa1394040:CDS 30.0%
GAATTAGTCGAATTTGAAGA+GGG + tig0021785:4479-4498 Msa1394040:CDS 30.0%
! ATTGATTCTATGATCCCTAT+AGG + tig0021785:4785-4804 Msa1394040:CDS 30.0%
TTGATTCTATGATCCCTATA+GGG + tig0021785:4786-4805 Msa1394040:CDS 30.0%
AGATACAATTCTCAATCAAC+AGG + tig0021785:4868-4887 Msa1394040:CDS 30.0%
GATACAATTCTCAATCAACA+GGG + tig0021785:4869-4888 Msa1394040:CDS 30.0%
GTAACTACTTTACAAGAAAG+AGG + tig0021785:4953-4972 Msa1394040:intron 30.0%
AACTACTTTACAAGAAAGAG+GGG + tig0021785:4955-4974 Msa1394040:intron 30.0%
AATGGAGTACACTATTATAG+TGG + tig0021785:4979-4998 Msa1394040:intron 30.0%
TTCGTAATAGAAGAGACATT+TGG - tig0021785:5144-5163 None:intergenic 30.0%
GCTAAATTAAGTTCTCAGTT+AGG + tig0021785:5232-5251 Msa1394040:CDS 30.0%
AAATATTTGGCCATCTGTAA+TGG - tig0021785:5338-5357 None:intergenic 30.0%
GATCGGCAGATAAAAATATT+TGG - tig0021785:5351-5370 None:intergenic 30.0%
TCAAATTAAAGCCATGAAAC+AGG + tig0021785:5438-5457 Msa1394040:intron 30.0%
GGTAGCTGGTAAATTAAAAT+TGG + tig0021785:5459-5478 Msa1394040:intron 30.0%
TAAAGCTACGCAAAATCAAT+TGG + tig0021785:5537-5556 Msa1394040:CDS 30.0%
ACTATTTATACTGGAACGAA+TGG + tig0021785:5634-5653 Msa1394040:intron 30.0%
GTAAATTTCTCGTTGAGTTA+AGG + tig0021785:5689-5708 Msa1394040:intron 30.0%
GGGTACTTTATTACTTAGTC+TGG + tig0021785:2351-2370 Msa1394040:CDS 35.0%
! AGCTTTAACTATTTATGGGC+TGG + tig0021785:2384-2403 Msa1394040:CDS 35.0%
CATTGGACTAAATAAAGGGA+CGG - tig0021785:2631-2650 None:intergenic 35.0%
CGCTCATTGGACTAAATAAA+GGG - tig0021785:2635-2654 None:intergenic 35.0%
!! CTAAGAGGTATCGTTCTTAT+AGG + tig0021785:2726-2745 Msa1394040:intron 35.0%
! ATGAAAAAAGTGCAGTTGGT+TGG - tig0021785:3174-3193 None:intergenic 35.0%
TTTAGTAAGAAGTCATTCGC+CGG - tig0021785:3221-3240 None:intergenic 35.0%
! TGGTAATGCTCCAAAATTCT+TGG - tig0021785:3327-3346 None:intergenic 35.0%
!!! AGAATTTTGGAGCATTACCA+TGG + tig0021785:3327-3346 Msa1394040:intron 35.0%
!! AAACTGGTTAGCTTTAACCA+TGG - tig0021785:3347-3366 None:intergenic 35.0%
ATTGCGTCTAAACTTCAAAC+TGG - tig0021785:3363-3382 None:intergenic 35.0%
ATTCCGCATTGTATAAAAGG+AGG - tig0021785:3516-3535 None:intergenic 35.0%
! GAAAGATTCATGTTTGGTTC+GGG + tig0021785:3759-3778 Msa1394040:intron 35.0%
GATTAATCAAGTGCAACAGA+GGG + tig0021785:4093-4112 Msa1394040:CDS 35.0%
GAGTTACATTTACGTACGAT+CGG + tig0021785:4172-4191 Msa1394040:CDS 35.0%
ACTAATTTCATCTGCACGAA+TGG - tig0021785:4336-4355 None:intergenic 35.0%
! TGTAGGCATTGCTTTGAATT+TGG + tig0021785:4505-4524 Msa1394040:CDS 35.0%
ACCATCAATAGGTTTAGCTA+GGG - tig0021785:4660-4679 None:intergenic 35.0%
AAATTTCAGCTTCGGAATCT+CGG + tig0021785:4687-4706 Msa1394040:CDS 35.0%
GCCAGCGAGAATTAATTATT+GGG + tig0021785:4813-4832 Msa1394040:CDS 35.0%
CCAGCGAGAATTAATTATTG+GGG + tig0021785:4814-4833 Msa1394040:CDS 35.0%
TGATTAAAGTGTGACGTTCA+CGG - tig0021785:5084-5103 None:intergenic 35.0%
TTAAGTTCTCAGTTAGGTGA+AGG + tig0021785:5238-5257 Msa1394040:intron 35.0%
! GATTCCAGCATTGAATAGAT+CGG - tig0021785:5368-5387 None:intergenic 35.0%
AATCAGACCAGCTATTAATG+TGG + tig0021785:5384-5403 Msa1394040:CDS 35.0%
ATCAGACCAGCTATTAATGT+GGG + tig0021785:5385-5404 Msa1394040:CDS 35.0%
GAAATACCCACATTAATAGC+TGG - tig0021785:5394-5413 None:intergenic 35.0%
CTGAATAGCTTCCTTCAAAA+GGG - tig0021785:5791-5810 None:intergenic 35.0%
! GATGGAACTCTTTTTACTTC+AGG + tig0021785:5816-5835 Msa1394040:intron 35.0%
!!! CTTATTTTGTCCTCTGCTTC+CGG - tig0021785:2331-2350 None:intergenic 40.0%
GGAAGCAGAGGACAAAATAA+GGG + tig0021785:2330-2349 Msa1394040:CDS 40.0%
GAAGCAGAGGACAAAATAAG+GGG + tig0021785:2331-2350 Msa1394040:CDS 40.0%
ATAGCAGCAATGAAAGTCCA+CGG - tig0021785:2493-2512 None:intergenic 40.0%
CTAAATAAAGGGACGGAAGA+AGG - tig0021785:2624-2643 None:intergenic 40.0%
GCGCTCATTGGACTAAATAA+AGG - tig0021785:2636-2655 None:intergenic 40.0%
TATGATCGCATCTCCTCTTA+TGG - tig0021785:2973-2992 None:intergenic 40.0%
CTAGAAAAACGTGCATGATC+CGG + tig0021785:3199-3218 Msa1394040:intron 40.0%
CAATGAATCGCGAAATGCTA+TGG - tig0021785:3278-3297 None:intergenic 40.0%
CATAGCATTTCGCGATTCAT+TGG + tig0021785:3276-3295 Msa1394040:intron 40.0%
! ACGCCTCCTTTTATACAATG+CGG + tig0021785:3510-3529 Msa1394040:intron 40.0%
TCTCACACTCAATTCCGTAT+AGG - tig0021785:3727-3746 None:intergenic 40.0%
CGTTTCTACTTTCCTTAAGC+GGG - tig0021785:3935-3954 None:intergenic 40.0%
CCGTTTCTACTTTCCTTAAG+CGG - tig0021785:3936-3955 None:intergenic 40.0%
CCGCTTAAGGAAAGTAGAAA+CGG + tig0021785:3933-3952 Msa1394040:CDS 40.0%
AAGGAAAGTAGAAACGGAAG+CGG + tig0021785:3939-3958 Msa1394040:CDS 40.0%
CGATTAATCAAGTGCAACAG+AGG + tig0021785:4092-4111 Msa1394040:CDS 40.0%
! ACAGGTACTGTACTTCAAGT+AGG + tig0021785:4410-4429 Msa1394040:CDS 40.0%
!! GAATTTGAAGAGGGTACTGT+AGG + tig0021785:4488-4507 Msa1394040:CDS 40.0%
! GGTGTTGTATTAATGGGTGA+TGG + tig0021785:4542-4561 Msa1394040:CDS 40.0%
!! TGATGGTTTGCTGATACAAG+AGG + tig0021785:4559-4578 Msa1394040:CDS 40.0%
!! GATGGTTTGCTGATACAAGA+GGG + tig0021785:4560-4579 Msa1394040:CDS 40.0%
ACCAGTAAGTGAGGGTTATT+TGG + tig0021785:4619-4638 Msa1394040:CDS 40.0%
CCAGTAAGTGAGGGTTATTT+GGG + tig0021785:4620-4639 Msa1394040:CDS 40.0%
GACCATCAATAGGTTTAGCT+AGG - tig0021785:4661-4680 None:intergenic 40.0%
ATTTCTCCTCGACCATCAAT+AGG - tig0021785:4671-4690 None:intergenic 40.0%
TCGAGGAGAAATTTCAGCTT+CGG + tig0021785:4679-4698 Msa1394040:CDS 40.0%
GAACGTCTGGAAATAATACC+GGG - tig0021785:4731-4750 None:intergenic 40.0%
GGAACGTCTGGAAATAATAC+CGG - tig0021785:4732-4751 None:intergenic 40.0%
GGCCAGCGAGAATTAATTAT+TGG + tig0021785:4812-4831 Msa1394040:CDS 40.0%
CCCCAATAATTAATTCTCGC+TGG - tig0021785:4817-4836 None:intergenic 40.0%
ATTATTGGGGACAGACAAAC+AGG + tig0021785:4827-4846 Msa1394040:CDS 40.0%
!! TGGTCAAAAAGCATCTTCTG+TGG + tig0021785:4922-4941 Msa1394040:intron 40.0%
TTTACAAGAAAGAGGGGCAA+TGG + tig0021785:4961-4980 Msa1394040:intron 40.0%
AGCTGAAACATCTCCTGATT+GGG - tig0021785:5293-5312 None:intergenic 40.0%
AAGCTGAAACATCTCCTGAT+TGG - tig0021785:5294-5313 None:intergenic 40.0%
TTTACCAGCTACCTGTTTCA+TGG - tig0021785:5452-5471 None:intergenic 40.0%
ACGCAAAATCAATTGGCAAG+AGG + tig0021785:5544-5563 Msa1394040:CDS 40.0%
TCTTCTACCAAGACATTCAC+TGG + tig0021785:5754-5773 Msa1394040:intron 40.0%
CTTCTACCAAGACATTCACT+GGG + tig0021785:5755-5774 Msa1394040:intron 40.0%
TTCTACCAAGACATTCACTG+GGG + tig0021785:5756-5775 Msa1394040:intron 40.0%
CCTGAATAGCTTCCTTCAAA+AGG - tig0021785:5792-5811 None:intergenic 40.0%
!! CCTTTTGAAGGAAGCTATTC+AGG + tig0021785:5789-5808 Msa1394040:intron 40.0%
ACAGAAGCAGCAGAAATCAG+TGG - tig0021785:2211-2230 None:intergenic 45.0%
CGGAAGCAGAGGACAAAATA+AGG + tig0021785:2329-2348 Msa1394040:CDS 45.0%
!! TAAATAAAGGGGGCGCTCAT+TGG - tig0021785:2648-2667 None:intergenic 45.0%
GGTATCAAACCCGAAACTTC+CGG - tig0021785:3044-3063 None:intergenic 45.0%
AAGTAGAAACGGAAGCGGAT+CGG + tig0021785:3944-3963 Msa1394040:CDS 45.0%
ACAAGCATTACAAGGAGCTC+TGG + tig0021785:4123-4142 Msa1394040:CDS 45.0%
CAAGCATTACAAGGAGCTCT+GGG + tig0021785:4124-4143 Msa1394040:CDS 45.0%
ACTGTACTTCAAGTAGGCGA+CGG + tig0021785:4416-4435 Msa1394040:CDS 45.0%
GACGGCATTGCTCGTATTTA+TGG + tig0021785:4434-4453 Msa1394040:intron 45.0%
GGTCTTGATGAAGTAATGGC+AGG + tig0021785:4455-4474 Msa1394040:intron 45.0%
GCTGATACAAGAGGGAAGTT+CGG + tig0021785:4568-4587 Msa1394040:CDS 45.0%
GGAAGTTCGGTAAAAGCAAC+AGG + tig0021785:4581-4600 Msa1394040:CDS 45.0%
TGCTCAGATACCAGTAAGTG+AGG + tig0021785:4610-4629 Msa1394040:CDS 45.0%
GCTCAGATACCAGTAAGTGA+GGG + tig0021785:4611-4630 Msa1394040:CDS 45.0%
CCCAAATAACCCTCACTTAC+TGG - tig0021785:4623-4642 None:intergenic 45.0%
GCCCTAGCTAAACCTATTGA+TGG + tig0021785:4656-4675 Msa1394040:CDS 45.0%
! GCTAAACCTATTGATGGTCG+AGG + tig0021785:4662-4681 Msa1394040:CDS 45.0%
TCTGGAAATAATACCGGGAG+CGG - tig0021785:4726-4745 None:intergenic 45.0%
CGTTTGAAGAGGCTCATACA+CGG - tig0021785:4753-4772 None:intergenic 45.0%
CGTGTATGAGCCTCTTCAAA+CGG + tig0021785:4751-4770 Msa1394040:CDS 45.0%
GTGTATGAGCCTCTTCAAAC+GGG + tig0021785:4752-4771 Msa1394040:CDS 45.0%
GCAATAAGTCCCGTTTGAAG+AGG - tig0021785:4764-4783 None:intergenic 45.0%
!! GCGAGGTATTGTAATGTAGC+TGG - tig0021785:5022-5041 None:intergenic 45.0%
CAATACCTCGCTCCTTATAC+AGG + tig0021785:5031-5050 Msa1394040:intron 45.0%
TAAGCCTGTGCTTGTTTGGA+GGG - tig0021785:5118-5137 None:intergenic 45.0%
ATAAGCCTGTGCTTGTTTGG+AGG - tig0021785:5119-5138 None:intergenic 45.0%
CTTCTATTACGAAGACCACC+AGG + tig0021785:5151-5170 Msa1394040:CDS 45.0%
CCTGATTGGGTCTCAACTAT+TGG - tig0021785:5280-5299 None:intergenic 45.0%
CCAATAGTTGAGACCCAATC+AGG + tig0021785:5277-5296 Msa1394040:CDS 45.0%
TCTGCCGATCTATTCAATGC+TGG + tig0021785:5361-5380 Msa1394040:CDS 45.0%
GGTATTTCCGTTTCCAGAGT+TGG + tig0021785:5406-5425 Msa1394040:intron 45.0%
TTCCGTTTCCAGAGTTGGAT+CGG + tig0021785:5411-5430 Msa1394040:intron 45.0%
AAAGCCATGAAACAGGTAGC+TGG + tig0021785:5445-5464 Msa1394040:intron 45.0%
ATCTGTTCTTCCACAGTGAG+AGG - tig0021785:5610-5629 None:intergenic 45.0%
GGAAGCTATTCAGGAACAGA+TGG + tig0021785:5798-5817 Msa1394040:intron 45.0%
CTGCTTCTGTTATCGCTGCT+GGG + tig0021785:2221-2240 Msa1394040:CDS 50.0%
TTCTGTTATCGCTGCTGGGT+TGG + tig0021785:2225-2244 Msa1394040:CDS 50.0%
TCCAATAGAAGCAAGCCCGA+CGG - tig0021785:2251-2270 None:intergenic 50.0%
GCTTCTATTGGACCTGGAGT+TGG + tig0021785:2259-2278 Msa1394040:CDS 50.0%
! ATTGGACCTGGAGTTGGTCA+AGG + tig0021785:2265-2284 Msa1394040:CDS 50.0%
TTGGTCAAGGTACAGCTGCA+GGG + tig0021785:2278-2297 Msa1394040:CDS 50.0%
TTCATTTACTGGCCATCCGC+CGG + tig0021785:3022-3041 Msa1394040:intron 50.0%
ATCAAACCCGAAACTTCCGG+CGG - tig0021785:3041-3060 None:intergenic 50.0%
GGCTTTCTCCAGCTGTTCAA+CGG - tig0021785:3908-3927 None:intergenic 50.0%
TTGAACAGCTGGAGAAAGCC+CGG + tig0021785:3908-3927 Msa1394040:CDS 50.0%
TTAATCGAATCTCCCGCTCC+CGG + tig0021785:4710-4729 Msa1394040:intron 50.0%
CTGGAAATAATACCGGGAGC+GGG - tig0021785:4725-4744 None:intergenic 50.0%
TCTATGATCCCTATAGGGCG+TGG + tig0021785:4791-4810 Msa1394040:CDS 50.0%
AGCATCTTCTGTGGCTCAAG+TGG + tig0021785:4931-4950 Msa1394040:intron 50.0%
TCCTTATACAGGTGCAGCTC+TGG + tig0021785:5042-5061 Msa1394040:intron 50.0%
GCGATAAGCCTGTGCTTGTT+TGG - tig0021785:5122-5141 None:intergenic 50.0%
CACAGTGAGAGGAGCTGATT+GGG - tig0021785:5599-5618 None:intergenic 50.0%
TGCTTCCCCAGTGAATGTCT+TGG - tig0021785:5764-5783 None:intergenic 50.0%
! GGAAGCAGAAGCCCTTTTGA+AGG + tig0021785:5777-5796 Msa1394040:intron 50.0%
GCTGCTTCTGTTATCGCTGC+TGG + tig0021785:2220-2239 Msa1394040:CDS 55.0%
! GGGCTTGCTTCTATTGGACC+TGG + tig0021785:2253-2272 Msa1394040:CDS 55.0%
GCTGTACCTTGACCAACTCC+AGG - tig0021785:2274-2293 None:intergenic 55.0%
GTTGGTCAAGGTACAGCTGC+AGG + tig0021785:2277-2296 Msa1394040:CDS 55.0%
CTGCAGGGCAAGCTGTAGAA+GGG + tig0021785:2293-2312 Msa1394040:CDS 55.0%
AGAAGGGATTGCGCGACAAC+CGG + tig0021785:2309-2328 Msa1394040:CDS 55.0%
TGAACAGCTGGAGAAAGCCC+GGG + tig0021785:3909-3928 Msa1394040:CDS 55.0%
TACTTTCCTTAAGCGGGCCC+GGG - tig0021785:3929-3948 None:intergenic 55.0%
CTACTTTCCTTAAGCGGGCC+CGG - tig0021785:3930-3949 None:intergenic 55.0%
! GCGGATCGGTTTCGAGTGAA+TGG + tig0021785:3958-3977 Msa1394040:intron 55.0%
AGGCTCATACACGGAACGTC+TGG - tig0021785:4744-4763 None:intergenic 55.0%
CTGCACCTGTATAAGGAGCG+AGG - tig0021785:5039-5058 None:intergenic 55.0%
GCCAGAGCTGCACCTGTATA+AGG - tig0021785:5046-5065 None:intergenic 55.0%
CGATCCCTCCAAACAAGCAC+AGG + tig0021785:5111-5130 Msa1394040:CDS 55.0%
! CGCCGATCCAACTCTGGAAA+CGG - tig0021785:5416-5435 None:intergenic 55.0%
CGTTTCCAGAGTTGGATCGG+CGG + tig0021785:5414-5433 Msa1394040:intron 55.0%
CCACAGTGAGAGGAGCTGAT+TGG - tig0021785:5600-5619 None:intergenic 55.0%
CCAATCAGCTCCTCTCACTG+TGG + tig0021785:5597-5616 Msa1394040:intron 55.0%
! GCCGTCGGGCTTGCTTCTAT+TGG + tig0021785:2247-2266 Msa1394040:CDS 60.0%
GCTGCAGGGCAAGCTGTAGA+AGG + tig0021785:2292-2311 Msa1394040:CDS 60.0%
TGGCCATCCGCCGGAAGTTT+CGG + tig0021785:3031-3050 Msa1394040:intron 60.0%
AACCCGAAACTTCCGGCGGA+TGG - tig0021785:3037-3056 None:intergenic 60.0%
GGAAGCAGCCGTTGAACAGC+TGG + tig0021785:3897-3916 Msa1394040:CDS 60.0%
TTGAGCCGCCGATCCAACTC+TGG - tig0021785:5422-5441 None:intergenic 60.0%
!! ATCGCTGCTGGGTTGGCCGT+CGG + tig0021785:2232-2251 Msa1394040:CDS 65.0%
TGCGCGACAACCGGAAGCAG+AGG + tig0021785:2318-2337 Msa1394040:CDS 65.0%
GGCCATCCGCCGGAAGTTTC+GGG + tig0021785:3032-3051 Msa1394040:intron 65.0%
AGAAAGCCCGGGCCCGCTTA+AGG + tig0021785:3920-3939 Msa1394040:CDS 65.0%
CTCGCTGGCCACGCCCTATA+GGG - tig0021785:4802-4821 None:intergenic 65.0%
TCTCGCTGGCCACGCCCTAT+AGG - tig0021785:4803-4822 None:intergenic 65.0%
GGATACGCTTCGCGACCTGG+TGG - tig0021785:5169-5188 None:intergenic 65.0%
CCAGGTCGCGAAGCGTATCC+CGG + tig0021785:5169-5188 Msa1394040:CDS 65.0%
!! TCGCTGCTGGGTTGGCCGTC+GGG + tig0021785:2233-2252 Msa1394040:CDS 70.0%
CCGGGATACGCTTCGCGACC+TGG - tig0021785:5172-5191 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0021785 gene 2202 6029 2202 ID=Msa1394040;Name=Msa1394040
tig0021785 mRNA 2202 6029 2202 ID=Msa1394040-mRNA-1;Parent=Msa1394040;Name=Msa1394040-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|0.9|0|0|10|0|532
tig0021785 exon 2202 2441 2202 ID=Msa1394040-mRNA-1:exon:14220;Parent=Msa1394040-mRNA-1
tig0021785 exon 3859 3972 3859 ID=Msa1394040-mRNA-1:exon:14221;Parent=Msa1394040-mRNA-1
tig0021785 exon 3995 4193 3995 ID=Msa1394040-mRNA-1:exon:14222;Parent=Msa1394040-mRNA-1
tig0021785 exon 4345 4446 4345 ID=Msa1394040-mRNA-1:exon:14223;Parent=Msa1394040-mRNA-1
tig0021785 exon 4477 4708 4477 ID=Msa1394040-mRNA-1:exon:14224;Parent=Msa1394040-mRNA-1
tig0021785 exon 4745 4923 4745 ID=Msa1394040-mRNA-1:exon:14225;Parent=Msa1394040-mRNA-1
tig0021785 exon 5053 5253 5053 ID=Msa1394040-mRNA-1:exon:14226;Parent=Msa1394040-mRNA-1
tig0021785 exon 5260 5423 5260 ID=Msa1394040-mRNA-1:exon:14227;Parent=Msa1394040-mRNA-1
tig0021785 exon 5460 5615 5460 ID=Msa1394040-mRNA-1:exon:14228;Parent=Msa1394040-mRNA-1
tig0021785 exon 6018 6029 6018 ID=Msa1394040-mRNA-1:exon:14229;Parent=Msa1394040-mRNA-1
tig0021785 CDS 2202 2441 2202 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
tig0021785 CDS 3859 3972 3859 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
tig0021785 CDS 3995 4193 3995 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
tig0021785 CDS 4345 4446 4345 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
tig0021785 CDS 4477 4708 4477 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
tig0021785 CDS 4745 4923 4745 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
tig0021785 CDS 5053 5253 5053 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
tig0021785 CDS 5260 5423 5260 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
tig0021785 CDS 5460 5615 5460 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
tig0021785 CDS 6018 6029 6018 ID=Msa1394040-mRNA-1:cds;Parent=Msa1394040-mRNA-1
Gene Sequence

>Msa1394040

ATGGATCCACTGATTTCTGCTGCTTCTGTTATCGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGAGTTGGTCAAGGTACAGCTGCAGGGCAAGCTGTAGAAGGGATTGCGCGACAACCGGAAGCAGAGGACAAAATAAGGGGTACTTTATTACTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGGCTGGTTGTAGCATTAGCACTTTTATTTGCCAATCCTTTTAGAATCTTGAGAACTATTCAAAATTCAGAAGAACTACGGGAAGCAGCCGTTGAACAGCTGGAGAAAGCCCGGGCCCGCTTAAGGAAAGTAGAAACGGAAGCGGATCGGTTTCGAAACGAGAAAAATTTGAATTTAATTAATTCAATTTATACAACTTTGGAACAATTCGAAAATTACAAAAATGAAACGATTCATTTTGAACAACAAAGGGCGATTAATCAAGTGCAACAGAGGGTTTTACAACAAGCATTACAAGGAGCTCTGGGAACTCTGAATAGTTGCTTAAACAACGAGTTACATTTACGTACGATCGATGAAATTAGTAAAATTATCCGTGAACGTATTGAGCAATATAATACCGAAGTAAAAATTGTAAATACAGGTACTGTACTTCAAGTAGGCGACGGCATTGCTCGTGAATTAGTCGAATTTGAAGAGGGTACTGTAGGCATTGCTTTGAATTTGGAATCCAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGCTGATACAAGAGGGAAGTTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGGTTATTTGGGTCGTGTTGTAAATGCCCTAGCTAAACCTATTGATGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGACGTTCCGTGTATGAGCCTCTTCAAACGGGACTTATTGCTATTGATTCTATGATCCCTATAGGGCGTGGCCAGCGAGAATTAATTATTGGGGACAGACAAACAGGTAAAACAGCAGTAGCAACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATCATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCAGGTCGCGAAGCGTATCCCGGAGATGTTTTTTATTTACATTCTCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCAGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTTTTATCTGCCGATCTATTCAATGCTGGAATCAGACCAGCTATTAATGTGGGTATTTCCGTTTCCAGAGTAGCTGGTAAATTAAAATTGGAATTGGCACAATTCGCAGAATTAGAAGCTTTTGCACAATTCGCTTCTGATCTCGATAAAGCTACGCAAAATCAATTGGCAAGAGGTCAACGATTGCGCGAGTTGCTTAAACAATCCCAATCAGCTCCTCTCACTATACGAATATAA

Protein sequence

>Msa1394040

MDPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTLLLSLAFMEALTIYGLVVALALLFANPFRILRTIQNSEELREAAVEQLEKARARLRKVETEADRFRNEKNLNLINSIYTTLEQFENYKNETIHFEQQRAINQVQQRVLQQALQGALGTLNSCLNNELHLRTIDEISKIIRERIEQYNTEVKIVNTGTVLQVGDGIARELVEFEEGTVGIALNLESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISASESRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTIRI*