AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1380680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1380680 MtrunA17_CPg0493001 98.060 670 13 0 429 1098 19 688 0.0 1360
Msa1380680 MtrunA17_CPg0493001 64.706 102 30 3 1056 1152 761 861 9.57e-27 119
Msa1380680 MtrunA17_Chr4g0016671 98.060 670 13 0 429 1098 19 688 0.0 1360
Msa1380680 MtrunA17_Chr4g0016671 64.706 102 30 3 1056 1152 761 861 9.57e-27 119
Msa1380680 MtrunA17_Chr3g0108441 98.387 434 5 1 1 432 1 434 0.0 873
Msa1380680 MtrunA17_Chr3g0108491 98.387 434 5 1 1 432 1 434 0.0 872
Msa1380680 MtrunA17_CPg0493021 98.387 434 5 1 1 432 1 434 0.0 872
Msa1380680 MtrunA17_Chr4g0016661 98.387 434 5 1 1 432 1 434 0.0 872
Msa1380680 MtrunA17_Chr4g0015581 88.208 424 7 1 529 952 1 381 0.0 756
Msa1380680 MtrunA17_Chr3g0095741 96.259 294 11 0 805 1098 8 301 0.0 579
Msa1380680 MtrunA17_Chr3g0095741 98.276 58 1 0 1095 1152 416 473 1.02e-27 118
Msa1380680 MtrunA17_Chr8g0342181 60.641 343 60 4 90 432 1 268 3.41e-118 367
Msa1380680 MtrunA17_Chr4g0015551 75.000 212 8 1 116 327 5 171 7.70e-95 300
Msa1380680 MtrunA17_Chr4g0015591 66.403 253 25 4 960 1152 1 253 2.30e-92 311
Msa1380680 MtrunA17_Chr3g0096371 95.652 115 5 0 168 282 1 115 7.46e-69 226
Msa1380680 MtrunA17_Chr4g0002751 82.796 93 16 0 128 220 1 93 8.81e-44 154
Msa1380680 MtrunA17_Chr2g0318321 91.667 60 5 0 426 485 35 94 3.26e-30 115
Msa1380680 MtrunA17_Chr4g0030401 28.247 308 191 6 140 423 248 549 3.63e-29 126
Msa1380680 MtrunA17_Chr4g0030391 28.803 309 188 7 140 423 247 548 5.73e-29 125
Msa1380680 MtrunA17_Chr5g0406121 28.526 312 190 6 141 423 241 548 1.11e-22 105
Msa1380680 MtrunA17_Chr4g0044991 25.949 316 183 7 151 423 317 624 1.90e-19 95.1
Msa1380680 MtrunA17_Chr4g0002761 66.667 54 18 0 375 428 1 54 7.20e-15 70.9
Msa1380680 MtrunA17_Chr4g0015571 94.286 35 2 0 426 460 16 50 1.53e-14 69.3
Msa1380680 MtrunA17_Chr8g0353071 28.053 303 186 10 145 422 211 506 7.87e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1380680 ATCG00170.1 79.083 698 128 4 430 1125 16 697 0.0 1115
Msa1380680 ATCG00170.1 68.966 58 15 1 1095 1152 802 856 6.12e-16 84.0
Msa1380680 ATCG00180.1 91.768 413 32 1 20 432 142 552 0.0 784
Msa1380680 AT5G60040.1 28.710 310 188 5 141 423 250 553 4.63e-28 123
Msa1380680 AT5G60040.2 28.710 310 188 5 141 423 260 563 6.33e-28 123
Msa1380680 AT4G35800.2 28.710 310 192 5 141 423 242 549 1.01e-23 109
Msa1380680 AT4G35800.1 28.710 310 192 5 141 423 242 549 1.01e-23 109
Msa1380680 AT3G57660.2 25.600 375 215 12 151 479 335 691 6.53e-19 94.0
Msa1380680 AT3G57660.2 28.458 253 139 10 540 756 923 1169 7.93e-15 80.5
Msa1380680 AT3G57660.1 25.600 375 215 12 151 479 348 704 6.77e-19 94.0
Msa1380680 AT3G57660.1 28.458 253 139 10 540 756 936 1182 8.22e-15 80.5
Msa1380680 AT1G63020.4 23.577 369 237 11 79 422 152 500 4.37e-14 77.8
Msa1380680 AT1G63020.1 23.577 369 237 11 79 422 152 500 4.52e-14 77.8
Msa1380680 AT1G63020.2 23.577 369 237 11 79 422 152 500 4.52e-14 77.8
Msa1380680 AT1G63020.3 23.577 369 237 11 79 422 152 500 4.59e-14 77.8
Msa1380680 AT1G63020.5 27.604 192 123 3 247 422 1 192 8.41e-13 73.6
Msa1380680 AT2G40030.1 29.016 193 121 3 246 422 310 502 7.71e-11 67.4
Msa1380680 AT2G40030.2 29.016 193 121 3 246 422 310 502 8.30e-11 67.4

Find 231 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTTTGATTTGGTATTT+TGG 0.149348 tig0020386:-102436 None:intergenic
GTTTGTATCAAAATTCTTTC+TGG 0.155430 tig0020386:-101182 None:intergenic
TTCTGGTATCATTCCATTTC+GGG 0.158141 tig0020386:-101165 None:intergenic
TGAACAACAAAGTTCTATTT+TGG 0.177929 tig0020386:+100701 Msa1380680:CDS
GTTGTCAATTATATTCTTTA+TGG 0.179224 tig0020386:+102896 Msa1380680:CDS
TACGGATCATTCTCATTTAA+TGG 0.188994 tig0020386:+102120 Msa1380680:CDS
TCTGGATTTAAGAATTATTA+TGG 0.190370 tig0020386:+98850 Msa1380680:CDS
TCTGCTAATAAGTCGTTTAA+TGG 0.223864 tig0020386:-100529 None:intergenic
ACCTCTTGTCTCCGGCTATT+GGG 0.225839 tig0020386:+99794 Msa1380680:CDS
AAATCTATTTCTTCGTCTTT+TGG 0.240397 tig0020386:-102179 None:intergenic
ATCCTCTCATTCCGACTAAT+TGG 0.248879 tig0020386:-100908 None:intergenic
ACTATTATTCCGTACCATTA+TGG 0.259697 tig0020386:-102509 None:intergenic
TGTTCATGTGCCTTTATCTT+TGG 0.264426 tig0020386:+99729 Msa1380680:CDS
CCAACTCAAGATATGCTTAT+AGG 0.271742 tig0020386:+99832 Msa1380680:CDS
CATTATATGGACTGGATTAA+AGG 0.289410 tig0020386:-100847 None:intergenic
AATTATATTCTTTATGGAAA+TGG 0.289554 tig0020386:+102902 Msa1380680:CDS
AACCTCTTGTCTCCGGCTAT+TGG 0.290298 tig0020386:+99793 Msa1380680:CDS
GCACGTCCTTCTACTAAAAT+AGG 0.292699 tig0020386:-99643 None:intergenic
GGATCTGCCGATTGTGTTAT+GGG 0.297223 tig0020386:+101363 Msa1380680:CDS
TTTCTGGTATCATTCCATTT+CGG 0.299397 tig0020386:-101166 None:intergenic
TAGATCTACTTGTTGTTAAT+AGG 0.299908 tig0020386:-99165 None:intergenic
AGTCATTTATGGATCTTATC+AGG 0.301174 tig0020386:+101890 Msa1380680:CDS
TGGATCTGCCGATTGTGTTA+TGG 0.301508 tig0020386:+101362 Msa1380680:CDS
GGGTCAGTCATCCTAAAATT+AGG 0.301712 tig0020386:-100825 None:intergenic
GGACTTGTTTAGTCTTGAAT+TGG 0.302268 tig0020386:+102969 Msa1380680:CDS
AGCGCCTACTTTGCATAGAT+TGG 0.308716 tig0020386:+99603 Msa1380680:CDS
CCTCCATCTATTTGAATAAT+CGG 0.310599 tig0020386:-99073 None:intergenic
TTGGTAGAATGGAAAGAATT+AGG 0.313946 tig0020386:+98881 Msa1380680:CDS
TCATGGGGACCTGGTAGAAT+TGG 0.318933 tig0020386:+101397 Msa1380680:CDS
AAAATCGATCTACTTTGATT+TGG 0.319610 tig0020386:-102444 None:intergenic
ACCCGAATCTTCTTCCATAA+TGG 0.320662 tig0020386:+102495 Msa1380680:CDS
TTCTCGTAAATTGCTTTGAA+TGG 0.322270 tig0020386:-100967 None:intergenic
TTATTAAGTTTGAAGACTTT+TGG 0.326721 tig0020386:+102046 Msa1380680:CDS
TTTACATCCATTAGTGTGTA+AGG 0.327520 tig0020386:+99672 Msa1380680:CDS
CAGTATCCACAACCCCTTTA+CGG 0.329838 tig0020386:-101031 None:intergenic
AACTTTGTTGTTCAGCATCT+TGG 0.334259 tig0020386:-100692 None:intergenic
AGAAATCAAGATATTGGAAT+TGG 0.334567 tig0020386:+101263 Msa1380680:CDS
TACGCCAATCCATTGAAATA+TGG 0.339395 tig0020386:+100766 Msa1380680:CDS
ATTATTGCTGGTCAATCTAT+TGG 0.340445 tig0020386:+101434 Msa1380680:CDS
TTGAATAATCGGTCTCAATT+CGG 0.341142 tig0020386:-99062 None:intergenic
GTCGTTAGAAATCAAGATAT+TGG 0.341954 tig0020386:+101257 Msa1380680:CDS
GGAAAACGAGTTGATTATTC+GGG 0.350240 tig0020386:+99358 Msa1380680:CDS
AGACCGATTATTCAAATAGA+TGG 0.352617 tig0020386:+99070 Msa1380680:CDS
ACTGCTACATCTATTTCATT+AGG 0.354727 tig0020386:+100627 Msa1380680:CDS
TGGAAAACGAGTTGATTATT+CGG 0.358566 tig0020386:+99357 Msa1380680:CDS
ATCTTGAGTTGGTACGGAAA+TGG 0.362284 tig0020386:-99821 None:intergenic
GGATACTGTATTTCCAAGAT+TGG 0.364284 tig0020386:-98739 None:intergenic
TGAATAATCGGTCTCAATTC+GGG 0.364643 tig0020386:-99061 None:intergenic
CTTAATGTTAGTTGAGTTCC+CGG 0.369671 tig0020386:-101461 None:intergenic
ATTCCAGGAAAGAGATAATC+TGG 0.369993 tig0020386:+102865 Msa1380680:intron
ATTATATGGACTGGATTAAA+GGG 0.370361 tig0020386:-100846 None:intergenic
AACATTGATTCTCTTTCTAC+TGG 0.378165 tig0020386:+101971 Msa1380680:CDS
GGTAAAATATGCACTTCTTC+GGG 0.379845 tig0020386:-102475 None:intergenic
TGGACTAGCCATCCTTTAGA+AGG 0.382153 tig0020386:-100672 None:intergenic
TTCCGCTAGTTAATACATAA+AGG 0.382446 tig0020386:-99855 None:intergenic
TTGAATCCCTTACACACTAA+TGG 0.385461 tig0020386:-99679 None:intergenic
GTGGATACACTCCTTGATAA+TGG 0.387696 tig0020386:+99235 Msa1380680:CDS
TACCATTATGGAAGAAGATT+CGG 0.389569 tig0020386:-102497 None:intergenic
ATTTCTGTAAATACCCGAAA+TGG 0.389944 tig0020386:+101152 Msa1380680:CDS
GGGTAAAATATGCACTTCTT+CGG 0.392587 tig0020386:-102476 None:intergenic
TTTCAGACATTTCTAATTCG+TGG 0.395006 tig0020386:+99457 Msa1380680:CDS
GACTTGTTTAGTCTTGAATT+GGG 0.395976 tig0020386:+102970 Msa1380680:CDS
TGGAAATGGAAAATCCATTC+GGG 0.398927 tig0020386:+102916 Msa1380680:CDS
ACGAGAACAATTAGTTGATC+TGG 0.400881 tig0020386:+98832 Msa1380680:CDS
GGCGCTCTATTCAGCAATAC+TGG 0.401200 tig0020386:-99586 None:intergenic
AGTATCCACAACCCCTTTAC+GGG 0.401249 tig0020386:-101030 None:intergenic
AGACATAAAACCATCCATTC+TGG 0.402557 tig0020386:-99022 None:intergenic
TGGTCAATCTATTGGCGAAC+CGG 0.405693 tig0020386:+101442 Msa1380680:CDS
ATTACTAAATATAGAACTAT+AGG 0.405919 tig0020386:+102352 Msa1380680:CDS
TGGATTCTTCGTTGGTAGAA+TGG 0.407733 tig0020386:+98870 Msa1380680:CDS
GGATTCAATGCAGACTTTGA+TGG 0.407959 tig0020386:+99694 Msa1380680:CDS
TCATGTGCCTTTATCTTTGG+AGG 0.409231 tig0020386:+99732 Msa1380680:CDS
CTTGCTACGGAGCCCGTAAA+GGG 0.410011 tig0020386:+101018 Msa1380680:CDS
AGCAGATTAATAGACCATTT+CGG 0.411046 tig0020386:+100546 Msa1380680:CDS
GCTTGAGCCTCCAAAGATAA+AGG 0.413525 tig0020386:-99739 None:intergenic
AACGAACTAATGCGACCTTC+TGG 0.414791 tig0020386:+102235 Msa1380680:CDS
TCTTTCCTTCTTGAATCGAT+TGG 0.414961 tig0020386:-102213 None:intergenic
TCGAATATGAAATCCAATCT+TGG 0.418713 tig0020386:+98726 Msa1380680:CDS
GACGTATTCCTACAGGTAAA+GGG 0.421613 tig0020386:-101338 None:intergenic
ACCATTGATAGGTATTTCAA+TGG 0.423769 tig0020386:-102263 None:intergenic
GATTCAATGCAGACTTTGAT+GGG 0.425961 tig0020386:+99695 Msa1380680:CDS
TCTTGAGTTGGTACGGAAAT+GGG 0.426083 tig0020386:-99820 None:intergenic
CTCAATTCGGGAGGAAGAAC+TGG 0.430438 tig0020386:-99049 None:intergenic
TCTCGTAAATTGCTTTGAAT+GGG 0.433790 tig0020386:-100966 None:intergenic
ATTCTGGTTCTATATTTGTT+CGG 0.435196 tig0020386:-99006 None:intergenic
TTATTATGACCGTCCCTCAT+TGG 0.440271 tig0020386:-99271 None:intergenic
TCTACCAGGTCCCCATGAAT+AGG 0.440638 tig0020386:-101392 None:intergenic
ATGGAAATGGAAAATCCATT+CGG 0.440917 tig0020386:+102915 Msa1380680:CDS
CATGGGGACCTGGTAGAATT+GGG 0.442448 tig0020386:+101398 Msa1380680:CDS
CATACCATATTTCAATGGAT+TGG 0.443039 tig0020386:-100770 None:intergenic
CAATACAGAAGACAGAATTC+AGG 0.444868 tig0020386:+102328 Msa1380680:CDS
CAGATTGCGGTACGATTCGC+GGG 0.446348 tig0020386:+101129 Msa1380680:CDS
TTTGCATAGATTGGGCATAC+AGG 0.446557 tig0020386:+99612 Msa1380680:CDS
TGTAGCATACCATATTTCAA+TGG 0.450731 tig0020386:-100775 None:intergenic
CATACTGGTGGAGTATTCAC+AGG 0.451249 tig0020386:+101491 Msa1380680:CDS
ACCATTATGGAAGAAGATTC+GGG 0.451336 tig0020386:-102496 None:intergenic
TCCATTGAAATACCTATCAA+TGG 0.461052 tig0020386:+102262 Msa1380680:CDS
CTGGATCAAGTAAAGACTCT+AGG 0.462436 tig0020386:+100591 Msa1380680:CDS
CACTGACAATGAAAATGAAT+GGG 0.463118 tig0020386:+98916 Msa1380680:CDS
CTAGAGTCTTTACTTGATCC+AGG 0.463607 tig0020386:-100590 None:intergenic
CCACTGACAATGAAAATGAA+TGG 0.464389 tig0020386:+98915 Msa1380680:CDS
AGACGTATTCCTACAGGTAA+AGG 0.465006 tig0020386:-101339 None:intergenic
TGGAAAGAATTAGGAGAAGA+GGG 0.467304 tig0020386:+98890 Msa1380680:CDS
CCTTCTTGAATCGATTGGAA+TGG 0.469170 tig0020386:-102208 None:intergenic
ACACAAGGATTCAATTAGTT+CGG 0.470880 tig0020386:+102948 Msa1380680:CDS
GTAGCAGACGATATATATAT+CGG 0.471989 tig0020386:+101221 Msa1380680:CDS
GAATTCTGTCTTCTGTATTG+AGG 0.475926 tig0020386:-102325 None:intergenic
GCGCCTACTTTGCATAGATT+GGG 0.476543 tig0020386:+99604 Msa1380680:CDS
TGAAGTATTTCCCATACAAT+CGG 0.477354 tig0020386:-99544 None:intergenic
CCTCTTGTCTCCGGCTATTG+GGG 0.480180 tig0020386:+99795 Msa1380680:CDS
GGGCGTTCTGTTATTGTCGT+AGG 0.483193 tig0020386:+99379 Msa1380680:CDS
AGAGAAATTTCTAGTGGAGC+AGG 0.488408 tig0020386:+98803 Msa1380680:CDS
TTAGTCTTGAATTGGGATCA+AGG 0.488756 tig0020386:+102977 Msa1380680:CDS
TCTTGCTACGGAGCCCGTAA+AGG 0.490200 tig0020386:+101017 Msa1380680:CDS
TGGAGGGAAACTAATGAGTT+CGG 0.494350 tig0020386:+99090 Msa1380680:CDS
GGCATATACATCACACATCC+TGG 0.495134 tig0020386:+100572 Msa1380680:CDS
TAACAATACCTTCTAAAGGA+TGG 0.495965 tig0020386:+100664 Msa1380680:CDS
ACTCAGAAGGCGAAATGCAT+TGG 0.496258 tig0020386:+101804 Msa1380680:CDS
CGAAATAGAGAAATTTCTAG+TGG 0.496839 tig0020386:+98797 Msa1380680:CDS
TAGCTCTATTGCTATTTCGC+GGG 0.496998 tig0020386:-99434 None:intergenic
AATTATTATGGATTCTTCGT+TGG 0.499116 tig0020386:+98862 Msa1380680:CDS
GAAGCTGTAGGTATTATTGC+TGG 0.500714 tig0020386:+101422 Msa1380680:CDS
TCATACAAACCTCTTGTCTC+CGG 0.506883 tig0020386:+99786 Msa1380680:CDS
ATGGGCGGAGTCCTATTCAT+GGG 0.508984 tig0020386:+101381 Msa1380680:CDS
GAATGGGAAGATCGAAAAGT+AGG 0.511851 tig0020386:+98932 Msa1380680:CDS
GACTCCGCCCATAACACAAT+CGG 0.512450 tig0020386:-101370 None:intergenic
CCTCGTAATCGTAAGAAAGT+AGG 0.512515 tig0020386:-98698 None:intergenic
CGGAGCCCGTAAAGGGGTTG+TGG 0.513039 tig0020386:+101025 Msa1380680:CDS
AAATCAATCATTTGTCCTTG+TGG 0.513235 tig0020386:-100942 None:intergenic
ATGGAAAGAATTAGGAGAAG+AGG 0.513927 tig0020386:+98889 Msa1380680:CDS
ATAGCTCTATTGCTATTTCG+CGG 0.516257 tig0020386:-99435 None:intergenic
TAGATGTAGCAGTAGCTTGA+CGG 0.516966 tig0020386:-100617 None:intergenic
TATGGGCGGAGTCCTATTCA+TGG 0.517790 tig0020386:+101380 Msa1380680:CDS
GAGTTGCTAAGAGTAAAATA+CGG 0.520079 tig0020386:+99512 Msa1380680:CDS
AGATTTCGAGAGACTCTGCT+TGG 0.523467 tig0020386:+99337 Msa1380680:CDS
ATGTATATGCCATTCCGAAA+TGG 0.525535 tig0020386:-100560 None:intergenic
GGTCAATCTATTGGCGAACC+GGG 0.527123 tig0020386:+101443 Msa1380680:CDS
AGACTTTGATGGGGATCAAA+TGG 0.531054 tig0020386:+99705 Msa1380680:CDS
ACAGATTGCGGTACGATTCG+CGG 0.531220 tig0020386:+101128 Msa1380680:CDS
GTCCGCGGATTCCATTATCA+AGG 0.532137 tig0020386:-99246 None:intergenic
CCTATAAGCATATCTTGAGT+TGG 0.532621 tig0020386:-99832 None:intergenic
ATTTAATCAAATAATATGTA+CGG 0.533241 tig0020386:+102102 Msa1380680:CDS
TTGGATAGGATCCAATAAGA+TGG 0.534215 tig0020386:-98643 None:intergenic
GAATATATAATTTCTTGCTA+CGG 0.534554 tig0020386:+101005 Msa1380680:CDS
ATCCATGACGTGTACGTGTA+GGG 0.535056 tig0020386:-101580 None:intergenic
CAGCTTCTCCCAATTCTACC+AGG 0.535523 tig0020386:-101406 None:intergenic
GATATAATTGAGGGCAAAGA+GGG 0.535939 tig0020386:+99313 Msa1380680:CDS
TCTATATTACATATAAAAGC+AGG 0.536951 tig0020386:-101605 None:intergenic
TGGATCAAGTAAAGACTCTA+GGG 0.538268 tig0020386:+100592 Msa1380680:CDS
AATACTTCAAGAAGTTATGC+GGG 0.538847 tig0020386:+99558 Msa1380680:CDS
ACTTACTTCAACAAAGGAAG+AGG 0.540450 tig0020386:-103029 None:intergenic
AAGCATATCTTGAGTTGGTA+CGG 0.543078 tig0020386:-99827 None:intergenic
CCATTCCAATCGATTCAAGA+AGG 0.543286 tig0020386:+102208 Msa1380680:CDS
TTCGGGGAATTTCCGACACA+AGG 0.543374 tig0020386:+102933 Msa1380680:CDS
GATCCAAGACGTATTCCTAC+AGG 0.544747 tig0020386:-101345 None:intergenic
TTACCTGTAGGAATACGTCT+TGG 0.547868 tig0020386:+101342 Msa1380680:CDS
CCTTTGAAAATCGGACGTGA+GGG 0.548394 tig0020386:-98613 None:intergenic
CATATTTATTCTGACTCAGA+AGG 0.548655 tig0020386:+101791 Msa1380680:CDS
TGACACATTACTAATTCCCC+TGG 0.549045 tig0020386:-99190 None:intergenic
GAACAAATATAGAACCAGAA+TGG 0.550621 tig0020386:+99008 Msa1380680:CDS
CCCTTTGAAAATCGGACGTG+AGG 0.550708 tig0020386:-98614 None:intergenic
GTTTGTACTTACTTCAACAA+AGG 0.560389 tig0020386:-103035 None:intergenic
AGTTGCTAAGAGTAAAATAC+GGG 0.563519 tig0020386:+99513 Msa1380680:CDS
TTACATCCATTAGTGTGTAA+GGG 0.565613 tig0020386:+99673 Msa1380680:CDS
CACCCTACACGTACACGTCA+TGG 0.566616 tig0020386:+101578 Msa1380680:CDS
AAATATAGAACCAGAATGGA+TGG 0.566690 tig0020386:+99012 Msa1380680:CDS
TCTATAGAAGAGTTATCTAT+CGG 0.571448 tig0020386:+99125 Msa1380680:CDS
GCTGTACGAACATCAGATGC+TGG 0.573261 tig0020386:+101053 Msa1380680:CDS
TACACGTCGACTTGTTGAAG+TGG 0.573503 tig0020386:+101082 Msa1380680:CDS
CCGATTATTCAAATAGATGG+AGG 0.576436 tig0020386:+99073 Msa1380680:CDS
GAAGATTTCATTGAGTATCG+AGG 0.578377 tig0020386:+102397 Msa1380680:CDS
ATGCCCAATCTATGCAAAGT+AGG 0.578492 tig0020386:-99607 None:intergenic
CACCAATTAGTCGGAATGAG+AGG 0.580106 tig0020386:+100906 Msa1380680:CDS
GAGTCCTATTCATGGGGACC+TGG 0.582108 tig0020386:+101388 Msa1380680:CDS
AACTAATTGAATCCTTGTGT+CGG 0.584495 tig0020386:-102945 None:intergenic
TCACTTTCATTACATCGATG+TGG 0.585158 tig0020386:+99406 Msa1380680:CDS
TCTTATCAGGAAAGTCGTGC+AGG 0.586356 tig0020386:+101903 Msa1380680:CDS
ATTAATAGACCATTTCGGAA+TGG 0.587547 tig0020386:+100551 Msa1380680:CDS
CCTACTTTCTTACGATTACG+AGG 0.587628 tig0020386:+98698 Msa1380680:CDS
GAAATGGGATCCCCAATAGC+CGG 0.587924 tig0020386:-99805 None:intergenic
TGTGTCGGAAATTCCCCGAA+TGG 0.589742 tig0020386:-102930 None:intergenic
ACGATATATATATCGGTTCA+CGG 0.590851 tig0020386:+101228 Msa1380680:CDS
GGCCTTTATGTATTAACTAG+CGG 0.596927 tig0020386:+99853 Msa1380680:CDS
AAAATTGGTACAAGAAGCCG+TGG 0.599616 tig0020386:+99216 Msa1380680:CDS
TATCCATGACGTGTACGTGT+AGG 0.600683 tig0020386:-101581 None:intergenic
AGCTCTATTGCTATTTCGCG+GGG 0.600779 tig0020386:-99433 None:intergenic
ATTCAAAGCAATTTACGAGA+AGG 0.601229 tig0020386:+100969 Msa1380680:CDS
CTCCTTGATAATGGAATCCG+CGG 0.604913 tig0020386:+99244 Msa1380680:CDS
AGATATAATTGAGGGCAAAG+AGG 0.606620 tig0020386:+99312 Msa1380680:CDS
CATCGATGTAATGAAAGTGA+TGG 0.607503 tig0020386:-99403 None:intergenic
CTTACTTCAACAAAGGAAGA+GGG 0.610881 tig0020386:-103028 None:intergenic
TACTTCAACAAAGGAAGAGG+GGG 0.611335 tig0020386:-103026 None:intergenic
TCTCAAGTGCACCAATTAGT+CGG 0.615181 tig0020386:+100897 Msa1380680:CDS
CCCCAATAGCCGGAGACAAG+AGG 0.615798 tig0020386:-99795 None:intergenic
ATTATCAAGGAGTGTATCCA+CGG 0.619206 tig0020386:-99233 None:intergenic
AATCCGCGGACAACCAATGA+GGG 0.620928 tig0020386:+99258 Msa1380680:CDS
AAATACTTTAGCCGGATGAG+AGG 0.622971 tig0020386:+98587 None:intergenic
CGTCCCTCATTGGTTGTCCG+CGG 0.625858 tig0020386:-99261 None:intergenic
GTGATTGCTGAGATCCGCGC+GGG 0.626051 tig0020386:+101731 Msa1380680:CDS
ACGTATTCCTACAGGTAAAG+GGG 0.629974 tig0020386:-101337 None:intergenic
TTGCTACGGAGCCCGTAAAG+GGG 0.638134 tig0020386:+101019 Msa1380680:CDS
AAATACTTCAAGAAGTTATG+CGG 0.639489 tig0020386:+99557 Msa1380680:CDS
CGATTATTCAAATAGATGGA+GGG 0.639639 tig0020386:+99074 Msa1380680:CDS
GTAGAATTGGGAGAAGCTGT+AGG 0.641313 tig0020386:+101410 Msa1380680:CDS
ATACTGGTGGAGTATTCACA+GGG 0.646983 tig0020386:+101492 Msa1380680:CDS
CGCGGACAACCAATGAGGGA+CGG 0.650205 tig0020386:+99262 Msa1380680:CDS
GTTGTACGTCGAACAGATTG+CGG 0.659130 tig0020386:+101116 Msa1380680:CDS
ACAACAAGTAGATCTACACC+AGG 0.661649 tig0020386:+99172 Msa1380680:CDS
ATTCAATGCAGACTTTGATG+GGG 0.662689 tig0020386:+99696 Msa1380680:CDS
GAAAACGAGTTGATTATTCG+GGG 0.664266 tig0020386:+99359 Msa1380680:CDS
TGGGCGGAGTCCTATTCATG+GGG 0.665077 tig0020386:+101382 Msa1380680:CDS
GAATCCGCGGACAACCAATG+AGG 0.667535 tig0020386:+99257 Msa1380680:CDS
TACTTCAAGAAGTTATGCGG+GGG 0.669171 tig0020386:+99560 Msa1380680:CDS
ATTTCAATGGAAACACCAGA+AGG 0.673294 tig0020386:-102250 None:intergenic
CGTATTCCTACAGGTAAAGG+GGG 0.679391 tig0020386:-101336 None:intergenic
TTACTTCAACAAAGGAAGAG+GGG 0.682642 tig0020386:-103027 None:intergenic
TTATATGGACTGGATTAAAG+GGG 0.684921 tig0020386:-100845 None:intergenic
ATACTTCAAGAAGTTATGCG+GGG 0.687954 tig0020386:+99559 Msa1380680:CDS
TCAGTATGGGAATGTACATG+CGG 0.691247 tig0020386:+100734 Msa1380680:CDS
GGAAATGGAAAATCCATTCG+GGG 0.695544 tig0020386:+102917 Msa1380680:CDS
TTCGGATGCATGGTACACAT+CGG 0.696241 tig0020386:-101831 None:intergenic
CAACAAGTAGATCTACACCA+GGG 0.701288 tig0020386:+99173 Msa1380680:CDS
AACAAGTAGATCTACACCAG+GGG 0.706918 tig0020386:+99174 Msa1380680:CDS
GGATTAATGTCAGATCCACA+AGG 0.711466 tig0020386:+100927 Msa1380680:CDS
ATAATCGGTCTCAATTCGGG+AGG 0.712530 tig0020386:-99058 None:intergenic
TTAACTAGCGGAAATCGTCG+AGG 0.734048 tig0020386:+99865 Msa1380680:CDS
TCTGCCGATTGTGTTATGGG+CGG 0.746299 tig0020386:+101366 Msa1380680:CDS
TAAAAGTATATGTTCCCGCG+CGG 0.748407 tig0020386:-101745 None:intergenic
ACTGGTGGAGTATTCACAGG+GGG 0.750203 tig0020386:+101494 Msa1380680:CDS
AGTGATTGCTGAGATCCGCG+CGG 0.769084 tig0020386:+101730 Msa1380680:CDS
TACTGGTGGAGTATTCACAG+GGG 0.793942 tig0020386:+101493 Msa1380680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAATCAAATAATATGTA+CGG + tig0020386:102102-102121 Msa1380680:CDS 10.0%
!!! TTTTTTTTTTCTTTTCTAAT+CGG - tig0020386:102594-102613 None:intergenic 10.0%
!! AATCAAAAAAAATTCATAAT+TGG + tig0020386:102726-102745 Msa1380680:intron 10.0%
!!! ATTTTGATACAAACATTAAT+TGG + tig0020386:101191-101210 Msa1380680:CDS 15.0%
!!! ATACTTTTAATTTGAAAGAA+AGG + tig0020386:101759-101778 Msa1380680:CDS 15.0%
!!! TACTTTTAATTTGAAAGAAA+GGG + tig0020386:101760-101779 Msa1380680:CDS 15.0%
!! TACATTACTATACAAAAATT+CGG - tig0020386:101852-101871 None:intergenic 15.0%
!! ATTACTAAATATAGAACTAT+AGG + tig0020386:102352-102371 Msa1380680:CDS 15.0%
!!! AATCGAATTAAAATATTTTC+TGG + tig0020386:102614-102633 Msa1380680:intron 15.0%
!!! TGTAATTTTATATGAAATAC+CGG + tig0020386:102805-102824 Msa1380680:intron 15.0%
!! AATTATATTCTTTATGGAAA+TGG + tig0020386:102902-102921 Msa1380680:CDS 15.0%
!! TCTGGATTTAAGAATTATTA+TGG + tig0020386:98850-98869 Msa1380680:CDS 20.0%
!! TTAGAATTTCTGCAATTAAA+CGG - tig0020386:99913-99932 None:intergenic 20.0%
!! GTACCTATTATGAAATTTAT+GGG + tig0020386:100130-100149 Msa1380680:intron 20.0%
!! GTAAATTTATGTTATGATAC+TGG + tig0020386:100324-100343 Msa1380680:intron 20.0%
!!! AAGAAATGAATCCTAATTTT+AGG + tig0020386:100814-100833 Msa1380680:CDS 20.0%
!! GAATATATAATTTCTTGCTA+CGG + tig0020386:101005-101024 Msa1380680:CDS 20.0%
!!! AATTTTATTTTTCCATTCGA+GGG - tig0020386:101542-101561 None:intergenic 20.0%
!!! AAATTTTATTTTTCCATTCG+AGG - tig0020386:101543-101562 None:intergenic 20.0%
!! TCTATATTACATATAAAAGC+AGG - tig0020386:101608-101627 None:intergenic 20.0%
!!! TGAACTAATAGAAAACTTTT+TGG - tig0020386:101683-101702 None:intergenic 20.0%
!!! TTATTAAGTTTGAAGACTTT+TGG + tig0020386:102046-102065 Msa1380680:CDS 20.0%
!!! TCACGATACTTTTTATTTAT+TGG + tig0020386:102156-102175 Msa1380680:CDS 20.0%
!!! GAAATCTTCTTTTTGAAAAA+CGG - tig0020386:102386-102405 None:intergenic 20.0%
!!! CAAAACAAAATACTTTTTCT+TGG - tig0020386:102777-102796 None:intergenic 20.0%
!!! CAAGAAAAAGTATTTTGTTT+TGG + tig0020386:102775-102794 Msa1380680:intron 20.0%
!!! AAAAGTATTTTGTTTTGGTT+CGG + tig0020386:102780-102799 Msa1380680:intron 20.0%
!! GGTATTTCATATAAAATTAC+AGG - tig0020386:102806-102825 None:intergenic 20.0%
!! GTTGTCAATTATATTCTTTA+TGG + tig0020386:102896-102915 Msa1380680:CDS 20.0%
!!! AAAGTAGGTTTTTTAACTAC+GGG - tig0020386:98686-98705 None:intergenic 25.0%
!!! GAAAGTAGGTTTTTTAACTA+CGG - tig0020386:98687-98706 None:intergenic 25.0%
! AATTATTATGGATTCTTCGT+TGG + tig0020386:98862-98881 Msa1380680:CDS 25.0%
!!! AGGAAGAAGAAAGAATTTTT+TGG + tig0020386:98952-98971 Msa1380680:CDS 25.0%
!!! ATTCTGGTTCTATATTTGTT+CGG - tig0020386:99009-99028 None:intergenic 25.0%
! TCTATAGAAGAGTTATCTAT+CGG + tig0020386:99125-99144 Msa1380680:CDS 25.0%
!!! TAGATCTACTTGTTGTTAAT+AGG - tig0020386:99168-99187 None:intergenic 25.0%
! AGTAATGTGTCAAGAAAAAT+TGG + tig0020386:99201-99220 Msa1380680:CDS 25.0%
!! ATCGTTTTCAGATATAATTG+AGG + tig0020386:99303-99322 Msa1380680:CDS 25.0%
!! TCGTTTTCAGATATAATTGA+GGG + tig0020386:99304-99323 Msa1380680:CDS 25.0%
! AAATACTTCAAGAAGTTATG+CGG + tig0020386:99557-99576 Msa1380680:CDS 25.0%
!!! TTTCAACCTATTTTAGTAGA+AGG + tig0020386:99637-99656 Msa1380680:CDS 25.0%
! TCATAGGAATTGCAAAAAAA+GGG - tig0020386:99985-100004 None:intergenic 25.0%
! ATCATAGGAATTGCAAAAAA+AGG - tig0020386:99986-100005 None:intergenic 25.0%
!! TAAATTTCGATAGTCCTTTT+TGG + tig0020386:100034-100053 Msa1380680:intron 25.0%
! GGTACCTATTATGAAATTTA+TGG + tig0020386:100129-100148 Msa1380680:intron 25.0%
! ATGCCCATAAATTTCATAAT+AGG - tig0020386:100136-100155 None:intergenic 25.0%
! TGATTAGATACCATATGAAT+AGG - tig0020386:100274-100293 None:intergenic 25.0%
! ATGGTATCTAATCATATAGA+TGG + tig0020386:100280-100299 Msa1380680:intron 25.0%
! ATAACATAAATTTACCTAGC+TGG - tig0020386:100319-100338 None:intergenic 25.0%
! CGTGAATAAACATAAAGAAA+AGG + tig0020386:100385-100404 Msa1380680:intron 25.0%
! AATGAATTTGAGTCAATGAT+TGG - tig0020386:100418-100437 None:intergenic 25.0%
!! CTTTTAACAATACCTTCTAA+AGG + tig0020386:100660-100679 Msa1380680:CDS 25.0%
!! TGAACAACAAAGTTCTATTT+TGG + tig0020386:100701-100720 Msa1380680:CDS 25.0%
! TTGGAAAAACATAATCAGTA+TGG + tig0020386:100720-100739 Msa1380680:CDS 25.0%
! TGGAAAAACATAATCAGTAT+GGG + tig0020386:100721-100740 Msa1380680:CDS 25.0%
!!! ATTATATGGACTGGATTAAA+GGG - tig0020386:100849-100868 None:intergenic 25.0%
! GTTTGTATCAAAATTCTTTC+TGG - tig0020386:101185-101204 None:intergenic 25.0%
! AGAAATCAAGATATTGGAAT+TGG + tig0020386:101263-101282 Msa1380680:CDS 25.0%
!! ACATTAAGAACTTTTCATAC+TGG + tig0020386:101476-101495 Msa1380680:CDS 25.0%
!!! ATTTTATTTTTCCATTCGAG+GGG - tig0020386:101541-101560 None:intergenic 25.0%
!! ACTAATAGAAAACTTTTTGG+TGG - tig0020386:101680-101699 None:intergenic 25.0%
! TACCAAAAACAAGTCATTTA+TGG + tig0020386:101879-101898 Msa1380680:CDS 25.0%
!!! ATCCATAAATGACTTGTTTT+TGG - tig0020386:101884-101903 None:intergenic 25.0%
!! ACTTTTGGTACAAAAGAAAA+GGG + tig0020386:102061-102080 Msa1380680:CDS 25.0%
!!! AAATCTATTTCTTCGTCTTT+TGG - tig0020386:102182-102201 None:intergenic 25.0%
! CTATGAAAAATACCATTGAT+AGG - tig0020386:102277-102296 None:intergenic 25.0%
!!! TCTACTTTGATTTGGTATTT+TGG - tig0020386:102439-102458 None:intergenic 25.0%
! AAAATCGATCTACTTTGATT+TGG - tig0020386:102447-102466 None:intergenic 25.0%
! CTTCTTATATTGAAAGTGAT+TGG - tig0020386:102553-102572 None:intergenic 25.0%
! AACGGTAAAAAAAAAATGGA+AGG + tig0020386:102703-102722 Msa1380680:intron 25.0%
!!! CAAAAAAAGTACTTCTATTG+AGG + tig0020386:103000-103019 Msa1380680:CDS 25.0%
! TTTGTTGAAGTAAGTACAAA+CGG + tig0020386:103037-103056 Msa1380680:intron 25.0%
AGCAAACGAAAAATTTGGAT+AGG - tig0020386:98660-98679 None:intergenic 30.0%
! ATCCAAATTTTTCGTTTGCT+AGG + tig0020386:98660-98679 Msa1380680:CDS 30.0%
TCGAATATGAAATCCAATCT+TGG + tig0020386:98726-98745 Msa1380680:CDS 30.0%
! CGAAATAGAGAAATTTCTAG+TGG + tig0020386:98797-98816 Msa1380680:CDS 30.0%
TTGGTAGAATGGAAAGAATT+AGG + tig0020386:98881-98900 Msa1380680:CDS 30.0%
CACTGACAATGAAAATGAAT+GGG + tig0020386:98916-98935 Msa1380680:CDS 30.0%
GAACAAATATAGAACCAGAA+TGG + tig0020386:99008-99027 Msa1380680:CDS 30.0%
AAATATAGAACCAGAATGGA+TGG + tig0020386:99012-99031 Msa1380680:CDS 30.0%
TTGAATAATCGGTCTCAATT+CGG - tig0020386:99065-99084 None:intergenic 30.0%
AGACCGATTATTCAAATAGA+TGG + tig0020386:99070-99089 Msa1380680:CDS 30.0%
CCTCCATCTATTTGAATAAT+CGG - tig0020386:99076-99095 None:intergenic 30.0%
CGATTATTCAAATAGATGGA+GGG + tig0020386:99074-99093 Msa1380680:CDS 30.0%
!! TGGAAAACGAGTTGATTATT+CGG + tig0020386:99357-99376 Msa1380680:CDS 30.0%
TTTCAGACATTTCTAATTCG+TGG + tig0020386:99457-99476 Msa1380680:CDS 30.0%
! AAACATTTTGCTTCGAACAT+AGG + tig0020386:99490-99509 Msa1380680:CDS 30.0%
GAGTTGCTAAGAGTAAAATA+CGG + tig0020386:99512-99531 Msa1380680:CDS 30.0%
AGTTGCTAAGAGTAAAATAC+GGG + tig0020386:99513-99532 Msa1380680:CDS 30.0%
! TGAAGTATTTCCCATACAAT+CGG - tig0020386:99547-99566 None:intergenic 30.0%
AATACTTCAAGAAGTTATGC+GGG + tig0020386:99558-99577 Msa1380680:CDS 30.0%
TTTACATCCATTAGTGTGTA+AGG + tig0020386:99672-99691 Msa1380680:CDS 30.0%
TTACATCCATTAGTGTGTAA+GGG + tig0020386:99673-99692 Msa1380680:CDS 30.0%
TTCCGCTAGTTAATACATAA+AGG - tig0020386:99858-99877 None:intergenic 30.0%
! GAAGTTCACTATGAATCTTT+TGG + tig0020386:100108-100127 Msa1380680:intron 30.0%
ATATACATTAGAACCACTGT+TGG + tig0020386:100195-100214 Msa1380680:intron 30.0%
AAAAGAAATATGACCAACAG+TGG - tig0020386:100211-100230 None:intergenic 30.0%
GAAATTGAAGAAGCTATACA+AGG + tig0020386:100237-100256 Msa1380680:intron 30.0%
GTTATTGTGAAAGACTAGAT+TGG - tig0020386:100493-100512 None:intergenic 30.0%
TCTGCTAATAAGTCGTTTAA+TGG - tig0020386:100532-100551 None:intergenic 30.0%
AGCAGATTAATAGACCATTT+CGG + tig0020386:100546-100565 Msa1380680:CDS 30.0%
ATTAATAGACCATTTCGGAA+TGG + tig0020386:100551-100570 Msa1380680:CDS 30.0%
ACTGCTACATCTATTTCATT+AGG + tig0020386:100627-100646 Msa1380680:CDS 30.0%
! TAACAATACCTTCTAAAGGA+TGG + tig0020386:100664-100683 Msa1380680:CDS 30.0%
CATACCATATTTCAATGGAT+TGG - tig0020386:100773-100792 None:intergenic 30.0%
TGTAGCATACCATATTTCAA+TGG - tig0020386:100778-100797 None:intergenic 30.0%
!! TTATATGGACTGGATTAAAG+GGG - tig0020386:100848-100867 None:intergenic 30.0%
!! CATTATATGGACTGGATTAA+AGG - tig0020386:100850-100869 None:intergenic 30.0%
GAAAAAGACATTATATGGAC+TGG - tig0020386:100858-100877 None:intergenic 30.0%
! GTCCATATAATGTCTTTTTC+AGG + tig0020386:100858-100877 Msa1380680:CDS 30.0%
CTCCTGAAAAAGACATTATA+TGG - tig0020386:100863-100882 None:intergenic 30.0%
AAATCAATCATTTGTCCTTG+TGG - tig0020386:100945-100964 None:intergenic 30.0%
! TCTCGTAAATTGCTTTGAAT+GGG - tig0020386:100969-100988 None:intergenic 30.0%
! TTCTCGTAAATTGCTTTGAA+TGG - tig0020386:100970-100989 None:intergenic 30.0%
ATTCAAAGCAATTTACGAGA+AGG + tig0020386:100969-100988 Msa1380680:CDS 30.0%
ATTTCTGTAAATACCCGAAA+TGG + tig0020386:101152-101171 Msa1380680:CDS 30.0%
! TTTCTGGTATCATTCCATTT+CGG - tig0020386:101169-101188 None:intergenic 30.0%
GTAGCAGACGATATATATAT+CGG + tig0020386:101221-101240 Msa1380680:CDS 30.0%
!! ACGATATATATATCGGTTCA+CGG + tig0020386:101228-101247 Msa1380680:CDS 30.0%
GTCGTTAGAAATCAAGATAT+TGG + tig0020386:101257-101276 Msa1380680:CDS 30.0%
ATTATTGCTGGTCAATCTAT+TGG + tig0020386:101434-101453 Msa1380680:CDS 30.0%
! TTAAGAACTTTTCATACTGG+TGG + tig0020386:101479-101498 Msa1380680:CDS 30.0%
!!! TTTTATTTTTCCATTCGAGG+GGG - tig0020386:101540-101559 None:intergenic 30.0%
CATATTTATTCTGACTCAGA+AGG + tig0020386:101791-101810 Msa1380680:CDS 30.0%
TATACAAAAATTCGGATGCA+TGG - tig0020386:101844-101863 None:intergenic 30.0%
AGTCATTTATGGATCTTATC+AGG + tig0020386:101890-101909 Msa1380680:CDS 30.0%
!!! AATCCATTTTTTACTTCGCA+AGG + tig0020386:101934-101953 Msa1380680:CDS 30.0%
!! AACATTGATTCTCTTTCTAC+TGG + tig0020386:101971-101990 Msa1380680:CDS 30.0%
! GACTTTTGGTACAAAAGAAA+AGG + tig0020386:102060-102079 Msa1380680:CDS 30.0%
! CTTTTGGTACAAAAGAAAAG+GGG + tig0020386:102062-102081 Msa1380680:CDS 30.0%
TACGGATCATTCTCATTTAA+TGG + tig0020386:102120-102139 Msa1380680:CDS 30.0%
!! AAAGTATCGTGAAAAATAGC+AGG - tig0020386:102148-102167 None:intergenic 30.0%
TCCATTGAAATACCTATCAA+TGG + tig0020386:102262-102281 Msa1380680:CDS 30.0%
ACCATTGATAGGTATTTCAA+TGG - tig0020386:102266-102285 None:intergenic 30.0%
TACCATTATGGAAGAAGATT+CGG - tig0020386:102500-102519 None:intergenic 30.0%
AATCTTCTTCCATAATGGTA+CGG + tig0020386:102500-102519 Msa1380680:intron 30.0%
ACTATTATTCCGTACCATTA+TGG - tig0020386:102512-102531 None:intergenic 30.0%
AATAATAGTCTCGTTGGAAT+AGG + tig0020386:102523-102542 Msa1380680:intron 30.0%
TTCAATATAAGAAGTCGAGT+AGG + tig0020386:102559-102578 Msa1380680:intron 30.0%
!!! CATTTTTTTTTTACCGTTCC+GGG - tig0020386:102701-102720 None:intergenic 30.0%
!!! CCATTTTTTTTTTACCGTTC+CGG - tig0020386:102702-102721 None:intergenic 30.0%
ATAATTGGATCTATGTCCAA+TGG + tig0020386:102741-102760 Msa1380680:intron 30.0%
TTTACAAAATCGATACTGTC+CGG - tig0020386:102827-102846 None:intergenic 30.0%
ATGGAAATGGAAAATCCATT+CGG + tig0020386:102915-102934 Msa1380680:CDS 30.0%
AACTAATTGAATCCTTGTGT+CGG - tig0020386:102948-102967 None:intergenic 30.0%
ACACAAGGATTCAATTAGTT+CGG + tig0020386:102948-102967 Msa1380680:CDS 30.0%
!! GACTTGTTTAGTCTTGAATT+GGG + tig0020386:102970-102989 Msa1380680:CDS 30.0%
!! AAAAAGTACTTCTATTGAGG+AGG + tig0020386:103003-103022 Msa1380680:CDS 30.0%
GTTTGTACTTACTTCAACAA+AGG - tig0020386:103038-103057 None:intergenic 30.0%
TTGGATAGGATCCAATAAGA+TGG - tig0020386:98646-98665 None:intergenic 35.0%
GGATACTGTATTTCCAAGAT+TGG - tig0020386:98742-98761 None:intergenic 35.0%
CTTGAGTAGCAAAAAAGAGT+GGG - tig0020386:98763-98782 None:intergenic 35.0%
ACGAGAACAATTAGTTGATC+TGG + tig0020386:98832-98851 Msa1380680:CDS 35.0%
ATGGAAAGAATTAGGAGAAG+AGG + tig0020386:98889-98908 Msa1380680:CDS 35.0%
TGGAAAGAATTAGGAGAAGA+GGG + tig0020386:98890-98909 Msa1380680:CDS 35.0%
! CCATTCATTTTCATTGTCAG+TGG - tig0020386:98918-98937 None:intergenic 35.0%
CCACTGACAATGAAAATGAA+TGG + tig0020386:98915-98934 Msa1380680:CDS 35.0%
AGACATAAAACCATCCATTC+TGG - tig0020386:99025-99044 None:intergenic 35.0%
TGAATAATCGGTCTCAATTC+GGG - tig0020386:99064-99083 None:intergenic 35.0%
CCGATTATTCAAATAGATGG+AGG + tig0020386:99073-99092 Msa1380680:CDS 35.0%
! ATTATCAAGGAGTGTATCCA+CGG - tig0020386:99236-99255 None:intergenic 35.0%
AGATATAATTGAGGGCAAAG+AGG + tig0020386:99312-99331 Msa1380680:CDS 35.0%
GATATAATTGAGGGCAAAGA+GGG + tig0020386:99313-99332 Msa1380680:CDS 35.0%
!! GGAAAACGAGTTGATTATTC+GGG + tig0020386:99358-99377 Msa1380680:CDS 35.0%
!! GAAAACGAGTTGATTATTCG+GGG + tig0020386:99359-99378 Msa1380680:CDS 35.0%
CATCGATGTAATGAAAGTGA+TGG - tig0020386:99406-99425 None:intergenic 35.0%
TCACTTTCATTACATCGATG+TGG + tig0020386:99406-99425 Msa1380680:CDS 35.0%
!! ATAGCTCTATTGCTATTTCG+CGG - tig0020386:99438-99457 None:intergenic 35.0%
GGAAAAAGAACCGATTGTAT+GGG + tig0020386:99534-99553 Msa1380680:CDS 35.0%
ATACTTCAAGAAGTTATGCG+GGG + tig0020386:99559-99578 Msa1380680:CDS 35.0%
TTGAATCCCTTACACACTAA+TGG - tig0020386:99682-99701 None:intergenic 35.0%
GATTCAATGCAGACTTTGAT+GGG + tig0020386:99695-99714 Msa1380680:CDS 35.0%
ATTCAATGCAGACTTTGATG+GGG + tig0020386:99696-99715 Msa1380680:CDS 35.0%
TGTTCATGTGCCTTTATCTT+TGG + tig0020386:99729-99748 Msa1380680:CDS 35.0%
!! AAGCATATCTTGAGTTGGTA+CGG - tig0020386:99830-99849 None:intergenic 35.0%
CCTATAAGCATATCTTGAGT+TGG - tig0020386:99835-99854 None:intergenic 35.0%
CCAACTCAAGATATGCTTAT+AGG + tig0020386:99832-99851 Msa1380680:CDS 35.0%
GGCCTTTATGTATTAACTAG+CGG + tig0020386:99853-99872 Msa1380680:CDS 35.0%
TGCAATTCCTATGATGCAAT+TGG + tig0020386:99991-100010 Msa1380680:intron 35.0%
ATAAGCTCCAATTGCATCAT+AGG - tig0020386:100001-100020 None:intergenic 35.0%
GATTCATAGTGAACTTCGAT+AGG - tig0020386:100105-100124 None:intergenic 35.0%
! TTTTCTCGAGCCTATTCATA+TGG + tig0020386:100261-100280 Msa1380680:intron 35.0%
TATGATACTGGCGTAAATTC+AGG + tig0020386:100336-100355 Msa1380680:intron 35.0%
GTCTTTCACAATAACGTGAT+AGG + tig0020386:100498-100517 Msa1380680:intron 35.0%
TTTCACAATAACGTGATAGG+TGG + tig0020386:100501-100520 Msa1380680:intron 35.0%
ATGTATATGCCATTCCGAAA+TGG - tig0020386:100563-100582 None:intergenic 35.0%
TGGATCAAGTAAAGACTCTA+GGG + tig0020386:100592-100611 Msa1380680:CDS 35.0%
!! AACTTTGTTGTTCAGCATCT+TGG - tig0020386:100695-100714 None:intergenic 35.0%
TACGCCAATCCATTGAAATA+TGG + tig0020386:100766-100785 Msa1380680:CDS 35.0%
TTCTGGTATCATTCCATTTC+GGG - tig0020386:101168-101187 None:intergenic 35.0%
AAGGGGGTTCGAATAAATAT+TGG - tig0020386:101323-101342 None:intergenic 35.0%
CTTAATGTTAGTTGAGTTCC+CGG - tig0020386:101464-101483 None:intergenic 35.0%
GATCCTTGCGAAGTAAAAAA+TGG - tig0020386:101940-101959 None:intergenic 35.0%
TCTTTCCTTCTTGAATCGAT+TGG - tig0020386:102216-102235 None:intergenic 35.0%
ATTTCAATGGAAACACCAGA+AGG - tig0020386:102253-102272 None:intergenic 35.0%
GAATTCTGTCTTCTGTATTG+AGG - tig0020386:102328-102347 None:intergenic 35.0%
CAATACAGAAGACAGAATTC+AGG + tig0020386:102328-102347 Msa1380680:CDS 35.0%
! GAAGATTTCATTGAGTATCG+AGG + tig0020386:102397-102416 Msa1380680:CDS 35.0%
GGTAAAATATGCACTTCTTC+GGG - tig0020386:102478-102497 None:intergenic 35.0%
GGGTAAAATATGCACTTCTT+CGG - tig0020386:102479-102498 None:intergenic 35.0%
ACCATTATGGAAGAAGATTC+GGG - tig0020386:102499-102518 None:intergenic 35.0%
AATATAAGAAGTCGAGTAGG+CGG + tig0020386:102562-102581 Msa1380680:intron 35.0%
! TCTGGAAATATCCATTTTCC+CGG + tig0020386:102632-102651 Msa1380680:intron 35.0%
TATCAAGATAGAACTGTGTC+GGG - tig0020386:102675-102694 None:intergenic 35.0%
GTATCAAGATAGAACTGTGT+CGG - tig0020386:102676-102695 None:intergenic 35.0%
CCGGAACGGTAAAAAAAAAA+TGG + tig0020386:102699-102718 Msa1380680:intron 35.0%
TCTTTCCTGGAATAGATCTT+GGG - tig0020386:102858-102877 None:intergenic 35.0%
ATTCCAGGAAAGAGATAATC+TGG + tig0020386:102865-102884 Msa1380680:intron 35.0%
TGGAAATGGAAAATCCATTC+GGG + tig0020386:102916-102935 Msa1380680:CDS 35.0%
!! GGACTTGTTTAGTCTTGAAT+TGG + tig0020386:102969-102988 Msa1380680:CDS 35.0%
!! TTAGTCTTGAATTGGGATCA+AGG + tig0020386:102977-102996 Msa1380680:CDS 35.0%
TTACTTCAACAAAGGAAGAG+GGG - tig0020386:103030-103049 None:intergenic 35.0%
CTTACTTCAACAAAGGAAGA+GGG - tig0020386:103031-103050 None:intergenic 35.0%
ACTTACTTCAACAAAGGAAG+AGG - tig0020386:103032-103051 None:intergenic 35.0%
AGAAAAAGAAATGACCCATC+TGG + tig0020386:103115-103134 Msa1380680:intron 35.0%
GGCCTAGCAAACGAAAAATT+TGG - tig0020386:98665-98684 None:intergenic 40.0%
CCTCGTAATCGTAAGAAAGT+AGG - tig0020386:98701-98720 None:intergenic 40.0%
CCTACTTTCTTACGATTACG+AGG + tig0020386:98698-98717 Msa1380680:CDS 40.0%
CCTTGAGTAGCAAAAAAGAG+TGG - tig0020386:98764-98783 None:intergenic 40.0%
!!! CCACTCTTTTTTGCTACTCA+AGG + tig0020386:98761-98780 Msa1380680:CDS 40.0%
!! AGAGAAATTTCTAGTGGAGC+AGG + tig0020386:98803-98822 Msa1380680:CDS 40.0%
! TGGATTCTTCGTTGGTAGAA+TGG + tig0020386:98870-98889 Msa1380680:CDS 40.0%
GAATGGGAAGATCGAAAAGT+AGG + tig0020386:98932-98951 Msa1380680:CDS 40.0%
!!! GAATTTTTTGGTTCGACGCA+TGG + tig0020386:98964-98983 Msa1380680:CDS 40.0%
TGGAGGGAAACTAATGAGTT+CGG + tig0020386:99090-99109 Msa1380680:CDS 40.0%
ACAACAAGTAGATCTACACC+AGG + tig0020386:99172-99191 Msa1380680:CDS 40.0%
CAACAAGTAGATCTACACCA+GGG + tig0020386:99173-99192 Msa1380680:CDS 40.0%
AACAAGTAGATCTACACCAG+GGG + tig0020386:99174-99193 Msa1380680:CDS 40.0%
TGACACATTACTAATTCCCC+TGG - tig0020386:99193-99212 None:intergenic 40.0%
AAAATTGGTACAAGAAGCCG+TGG + tig0020386:99216-99235 Msa1380680:CDS 40.0%
GTGGATACACTCCTTGATAA+TGG + tig0020386:99235-99254 Msa1380680:CDS 40.0%
TTATTATGACCGTCCCTCAT+TGG - tig0020386:99274-99293 None:intergenic 40.0%
!! TAGCTCTATTGCTATTTCGC+GGG - tig0020386:99437-99456 None:intergenic 40.0%
GGGAAAAAGAACCGATTGTA+TGG + tig0020386:99533-99552 Msa1380680:CDS 40.0%
TACTTCAAGAAGTTATGCGG+GGG + tig0020386:99560-99579 Msa1380680:CDS 40.0%
ATGCCCAATCTATGCAAAGT+AGG - tig0020386:99610-99629 None:intergenic 40.0%
TTTGCATAGATTGGGCATAC+AGG + tig0020386:99612-99631 Msa1380680:CDS 40.0%
GCACGTCCTTCTACTAAAAT+AGG - tig0020386:99646-99665 None:intergenic 40.0%
GGATTCAATGCAGACTTTGA+TGG + tig0020386:99694-99713 Msa1380680:CDS 40.0%
AGACTTTGATGGGGATCAAA+TGG + tig0020386:99705-99724 Msa1380680:CDS 40.0%
TCATGTGCCTTTATCTTTGG+AGG + tig0020386:99732-99751 Msa1380680:CDS 40.0%
TCATACAAACCTCTTGTCTC+CGG + tig0020386:99786-99805 Msa1380680:CDS 40.0%
!! TCTTGAGTTGGTACGGAAAT+GGG - tig0020386:99823-99842 None:intergenic 40.0%
!! ATCTTGAGTTGGTACGGAAA+TGG - tig0020386:99824-99843 None:intergenic 40.0%
!! GTTAGTGTTGATATCCAGCT+AGG + tig0020386:100302-100321 Msa1380680:intron 40.0%
ATATTCCACTCAGTGGGATT+CGG - tig0020386:100447-100466 None:intergenic 40.0%
!! GTGGAATATGGAGGTACTTA+TGG + tig0020386:100458-100477 Msa1380680:intron 40.0%
CTAGAGTCTTTACTTGATCC+AGG - tig0020386:100593-100612 None:intergenic 40.0%
CTGGATCAAGTAAAGACTCT+AGG + tig0020386:100591-100610 Msa1380680:CDS 40.0%
TAGATGTAGCAGTAGCTTGA+CGG - tig0020386:100620-100639 None:intergenic 40.0%
TCAGTATGGGAATGTACATG+CGG + tig0020386:100734-100753 Msa1380680:CDS 40.0%
GGGTCAGTCATCCTAAAATT+AGG - tig0020386:100828-100847 None:intergenic 40.0%
!!! ATGTCTTTTTCAGGAGCTAG+AGG + tig0020386:100867-100886 Msa1380680:CDS 40.0%
TCTCAAGTGCACCAATTAGT+CGG + tig0020386:100897-100916 Msa1380680:CDS 40.0%
ATCCTCTCATTCCGACTAAT+TGG - tig0020386:100911-100930 None:intergenic 40.0%
GGATTAATGTCAGATCCACA+AGG + tig0020386:100927-100946 Msa1380680:CDS 40.0%
ACGTATTCCTACAGGTAAAG+GGG - tig0020386:101340-101359 None:intergenic 40.0%
GACGTATTCCTACAGGTAAA+GGG - tig0020386:101341-101360 None:intergenic 40.0%
AGACGTATTCCTACAGGTAA+AGG - tig0020386:101342-101361 None:intergenic 40.0%
TTACCTGTAGGAATACGTCT+TGG + tig0020386:101342-101361 Msa1380680:CDS 40.0%
GAAGCTGTAGGTATTATTGC+TGG + tig0020386:101422-101441 Msa1380680:CDS 40.0%
! ATACTGGTGGAGTATTCACA+GGG + tig0020386:101492-101511 Msa1380680:CDS 40.0%
! TAAAAGTATATGTTCCCGCG+CGG - tig0020386:101748-101767 None:intergenic 40.0%
CCTTCTTGAATCGATTGGAA+TGG - tig0020386:102211-102230 None:intergenic 40.0%
! CCATTCCAATCGATTCAAGA+AGG + tig0020386:102208-102227 Msa1380680:CDS 40.0%
ACCCGAATCTTCTTCCATAA+TGG + tig0020386:102495-102514 Msa1380680:CDS 40.0%
GTACGGAATAATAGTCTCGT+TGG + tig0020386:102517-102536 Msa1380680:intron 40.0%
AGTTCTATCTTGATACCACC+CGG + tig0020386:102680-102699 Msa1380680:intron 40.0%
!!! TTTTTTTTTACCGTTCCGGG+TGG - tig0020386:102698-102717 None:intergenic 40.0%
! TCTTGGTAGTTGTGATCCAT+TGG - tig0020386:102760-102779 None:intergenic 40.0%
! TTTTCCCCAAGATCTATTCC+AGG + tig0020386:102850-102869 Msa1380680:intron 40.0%
CTTTCCTGGAATAGATCTTG+GGG - tig0020386:102857-102876 None:intergenic 40.0%
CTCTTTCCTGGAATAGATCT+TGG - tig0020386:102859-102878 None:intergenic 40.0%
GTTCCAGATTATCTCTTTCC+TGG - tig0020386:102871-102890 None:intergenic 40.0%
GGAAATGGAAAATCCATTCG+GGG + tig0020386:102917-102936 Msa1380680:CDS 40.0%
TACTTCAACAAAGGAAGAGG+GGG - tig0020386:103029-103048 None:intergenic 40.0%
! AGAAATGACCCATCTGGTTT+AGG + tig0020386:103121-103140 Msa1380680:intron 40.0%
! CCTTTGAAAATCGGACGTGA+GGG - tig0020386:98616-98635 None:intergenic 45.0%
! CCTCACGTCCGATTTTCAAA+GGG + tig0020386:98614-98633 Msa1380680:CDS 45.0%
! CTCACGTCCGATTTTCAAAG+GGG + tig0020386:98615-98634 Msa1380680:CDS 45.0%
! TCACGTCCGATTTTCAAAGG+GGG + tig0020386:98616-98635 Msa1380680:CDS 45.0%
! GGATCTCCCCCTTTGAAAAT+CGG - tig0020386:98625-98644 None:intergenic 45.0%
AAGGGGGAGATCCATCTTAT+TGG + tig0020386:98632-98651 Msa1380680:CDS 45.0%
ATAATCGGTCTCAATTCGGG+AGG - tig0020386:99061-99080 None:intergenic 45.0%
!! CTCCTTGATAATGGAATCCG+CGG + tig0020386:99244-99263 Msa1380680:CDS 45.0%
AGATTTCGAGAGACTCTGCT+TGG + tig0020386:99337-99356 Msa1380680:CDS 45.0%
!! AGCTCTATTGCTATTTCGCG+GGG - tig0020386:99436-99455 None:intergenic 45.0%
AGCGCCTACTTTGCATAGAT+TGG + tig0020386:99603-99622 Msa1380680:CDS 45.0%
GCGCCTACTTTGCATAGATT+GGG + tig0020386:99604-99623 Msa1380680:CDS 45.0%
GCTTGAGCCTCCAAAGATAA+AGG - tig0020386:99742-99761 None:intergenic 45.0%
TTAACTAGCGGAAATCGTCG+AGG + tig0020386:99865-99884 Msa1380680:CDS 45.0%
! GTCGAGGTATTTGTGCAAAC+AGG + tig0020386:99881-99900 Msa1380680:intron 45.0%
!!! TCGATAGTCCTTTTTGGCTC+CGG + tig0020386:100040-100059 Msa1380680:intron 45.0%
! TGCATTGATCTATTCGCCAC+CGG - tig0020386:100062-100081 None:intergenic 45.0%
GAATCCCACTGAGTGGAATA+TGG + tig0020386:100446-100465 Msa1380680:intron 45.0%
ACCTCCATATTCCACTCAGT+GGG - tig0020386:100453-100472 None:intergenic 45.0%
TACCTCCATATTCCACTCAG+TGG - tig0020386:100454-100473 None:intergenic 45.0%
!! TGGAGGTACTTATGGCAGAA+CGG + tig0020386:100466-100485 Msa1380680:intron 45.0%
GGCATATACATCACACATCC+TGG + tig0020386:100572-100591 Msa1380680:CDS 45.0%
!! TGGACTAGCCATCCTTTAGA+AGG - tig0020386:100675-100694 None:intergenic 45.0%
CACCAATTAGTCGGAATGAG+AGG + tig0020386:100906-100925 Msa1380680:CDS 45.0%
AGTATCCACAACCCCTTTAC+GGG - tig0020386:101033-101052 None:intergenic 45.0%
CAGTATCCACAACCCCTTTA+CGG - tig0020386:101034-101053 None:intergenic 45.0%
!! TACACGTCGACTTGTTGAAG+TGG + tig0020386:101082-101101 Msa1380680:CDS 45.0%
GTTGTACGTCGAACAGATTG+CGG + tig0020386:101116-101135 Msa1380680:CDS 45.0%
CGTATTCCTACAGGTAAAGG+GGG - tig0020386:101339-101358 None:intergenic 45.0%
GATCCAAGACGTATTCCTAC+AGG - tig0020386:101348-101367 None:intergenic 45.0%
! TGGATCTGCCGATTGTGTTA+TGG + tig0020386:101362-101381 Msa1380680:CDS 45.0%
! GGATCTGCCGATTGTGTTAT+GGG + tig0020386:101363-101382 Msa1380680:CDS 45.0%
GTAGAATTGGGAGAAGCTGT+AGG + tig0020386:101410-101429 Msa1380680:CDS 45.0%
TGGTCAATCTATTGGCGAAC+CGG + tig0020386:101442-101461 Msa1380680:CDS 45.0%
! CATACTGGTGGAGTATTCAC+AGG + tig0020386:101491-101510 Msa1380680:CDS 45.0%
! TACTGGTGGAGTATTCACAG+GGG + tig0020386:101493-101512 Msa1380680:CDS 45.0%
ATCCATGACGTGTACGTGTA+GGG - tig0020386:101583-101602 None:intergenic 45.0%
TATCCATGACGTGTACGTGT+AGG - tig0020386:101584-101603 None:intergenic 45.0%
ACTCAGAAGGCGAAATGCAT+TGG + tig0020386:101804-101823 Msa1380680:CDS 45.0%
TTCGGATGCATGGTACACAT+CGG - tig0020386:101834-101853 None:intergenic 45.0%
TCTTATCAGGAAAGTCGTGC+AGG + tig0020386:101903-101922 Msa1380680:CDS 45.0%
AACGAACTAATGCGACCTTC+TGG + tig0020386:102235-102254 Msa1380680:CDS 45.0%
! ATATCCATTTTCCCGGAGAG+AGG + tig0020386:102639-102658 Msa1380680:intron 45.0%
! TATCCATTTTCCCGGAGAGA+GGG + tig0020386:102640-102659 Msa1380680:intron 45.0%
GATATCTTATCCCTCTCTCC+GGG - tig0020386:102653-102672 None:intergenic 45.0%
GGATATCTTATCCCTCTCTC+CGG - tig0020386:102654-102673 None:intergenic 45.0%
TATCTTGATACCACCCGGAA+CGG + tig0020386:102685-102704 Msa1380680:intron 45.0%
! CCCTCACGTCCGATTTTCAA+AGG + tig0020386:98613-98632 Msa1380680:CDS 50.0%
! CCCTTTGAAAATCGGACGTG+AGG - tig0020386:98617-98636 None:intergenic 50.0%
CTCAATTCGGGAGGAAGAAC+TGG - tig0020386:99052-99071 None:intergenic 50.0%
GTCCGCGGATTCCATTATCA+AGG - tig0020386:99249-99268 None:intergenic 50.0%
AATCCGCGGACAACCAATGA+GGG + tig0020386:99258-99277 Msa1380680:CDS 50.0%
GGGCGTTCTGTTATTGTCGT+AGG + tig0020386:99379-99398 Msa1380680:CDS 50.0%
GGCGCTCTATTCAGCAATAC+TGG - tig0020386:99589-99608 None:intergenic 50.0%
AACCTCTTGTCTCCGGCTAT+TGG + tig0020386:99793-99812 Msa1380680:CDS 50.0%
ACCTCTTGTCTCCGGCTATT+GGG + tig0020386:99794-99813 Msa1380680:CDS 50.0%
GAAATGGGATCCCCAATAGC+CGG - tig0020386:99808-99827 None:intergenic 50.0%
!!! ATAGTCCTTTTTGGCTCCGG+TGG + tig0020386:100043-100062 Msa1380680:intron 50.0%
TCCCACTGAGTGGAATATGG+AGG + tig0020386:100449-100468 Msa1380680:intron 50.0%
!! GGAGGTACTTATGGCAGAAC+GGG + tig0020386:100467-100486 Msa1380680:intron 50.0%
GCTGTACGAACATCAGATGC+TGG + tig0020386:101053-101072 Msa1380680:CDS 50.0%
ACAGATTGCGGTACGATTCG+CGG + tig0020386:101128-101147 Msa1380680:CDS 50.0%
TTCGAACCCCCTTTACCTGT+AGG + tig0020386:101330-101349 Msa1380680:CDS 50.0%
! TCTGCCGATTGTGTTATGGG+CGG + tig0020386:101366-101385 Msa1380680:CDS 50.0%
GACTCCGCCCATAACACAAT+CGG - tig0020386:101373-101392 None:intergenic 50.0%
TATGGGCGGAGTCCTATTCA+TGG + tig0020386:101380-101399 Msa1380680:CDS 50.0%
ATGGGCGGAGTCCTATTCAT+GGG + tig0020386:101381-101400 Msa1380680:CDS 50.0%
TCTACCAGGTCCCCATGAAT+AGG - tig0020386:101395-101414 None:intergenic 50.0%
TCATGGGGACCTGGTAGAAT+TGG + tig0020386:101397-101416 Msa1380680:CDS 50.0%
CATGGGGACCTGGTAGAATT+GGG + tig0020386:101398-101417 Msa1380680:CDS 50.0%
CAGCTTCTCCCAATTCTACC+AGG - tig0020386:101409-101428 None:intergenic 50.0%
GGTCAATCTATTGGCGAACC+GGG + tig0020386:101443-101462 Msa1380680:CDS 50.0%
! ACTGGTGGAGTATTCACAGG+GGG + tig0020386:101494-101513 Msa1380680:CDS 50.0%
!! AGTATTCACAGGGGGTACTG+CGG + tig0020386:101502-101521 Msa1380680:CDS 50.0%
AAGAAGTCGAGTAGGCGGAT+TGG + tig0020386:102567-102586 Msa1380680:intron 50.0%
TATCCCTCTCTCCGGGAAAA+TGG - tig0020386:102646-102665 None:intergenic 50.0%
TGTGTCGGAAATTCCCCGAA+TGG - tig0020386:102933-102952 None:intergenic 50.0%
TTCGGGGAATTTCCGACACA+AGG + tig0020386:102933-102952 Msa1380680:CDS 50.0%
GAATCCGCGGACAACCAATG+AGG + tig0020386:99257-99276 Msa1380680:CDS 55.0%
CCTCTTGTCTCCGGCTATTG+GGG + tig0020386:99795-99814 Msa1380680:CDS 55.0%
ATTCGCCACCGGAGCCAAAA+AGG - tig0020386:100051-100070 None:intergenic 55.0%
TCGAACCGAATCCCACTGAG+TGG + tig0020386:100439-100458 Msa1380680:intron 55.0%
TCTTGCTACGGAGCCCGTAA+AGG + tig0020386:101017-101036 Msa1380680:CDS 55.0%
CTTGCTACGGAGCCCGTAAA+GGG + tig0020386:101018-101037 Msa1380680:CDS 55.0%
TTGCTACGGAGCCCGTAAAG+GGG + tig0020386:101019-101038 Msa1380680:CDS 55.0%
CAGATTGCGGTACGATTCGC+GGG + tig0020386:101129-101148 Msa1380680:CDS 55.0%
TGGGCGGAGTCCTATTCATG+GGG + tig0020386:101382-101401 Msa1380680:CDS 55.0%
GAGTCCTATTCATGGGGACC+TGG + tig0020386:101388-101407 Msa1380680:CDS 55.0%
CACCCTACACGTACACGTCA+TGG + tig0020386:101578-101597 Msa1380680:CDS 55.0%
AGTGATTGCTGAGATCCGCG+CGG + tig0020386:101730-101749 Msa1380680:CDS 55.0%
! CGTCCCTCATTGGTTGTCCG+CGG - tig0020386:99264-99283 None:intergenic 60.0%
CGCGGACAACCAATGAGGGA+CGG + tig0020386:99262-99281 Msa1380680:CDS 60.0%
CCCCAATAGCCGGAGACAAG+AGG - tig0020386:99798-99817 None:intergenic 60.0%
TATGTGCGAGCCCCCTCGAA+TGG + tig0020386:101527-101546 Msa1380680:CDS 60.0%
GTGATTGCTGAGATCCGCGC+GGG + tig0020386:101731-101750 Msa1380680:CDS 60.0%
CGGAGCCCGTAAAGGGGTTG+TGG + tig0020386:101025-101044 Msa1380680:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0020386 gene 98602 103148 98602 ID=Msa1380680;Name=Msa1380680
tig0020386 mRNA 98602 103148 98602 ID=Msa1380680-mRNA-1;Parent=Msa1380680;Name=Msa1380680-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|4|0|1153
tig0020386 exon 98602 99886 98602 ID=Msa1380680-mRNA-1:exon:7174;Parent=Msa1380680-mRNA-1
tig0020386 exon 100520 102516 100520 ID=Msa1380680-mRNA-1:exon:7175;Parent=Msa1380680-mRNA-1
tig0020386 exon 102872 103045 102872 ID=Msa1380680-mRNA-1:exon:7176;Parent=Msa1380680-mRNA-1
tig0020386 exon 103143 103148 103143 ID=Msa1380680-mRNA-1:exon:7177;Parent=Msa1380680-mRNA-1
tig0020386 CDS 98602 99886 98602 ID=Msa1380680-mRNA-1:cds;Parent=Msa1380680-mRNA-1
tig0020386 CDS 100520 102516 100520 ID=Msa1380680-mRNA-1:cds;Parent=Msa1380680-mRNA-1
tig0020386 CDS 102872 103045 102872 ID=Msa1380680-mRNA-1:cds;Parent=Msa1380680-mRNA-1
tig0020386 CDS 103143 103148 103143 ID=Msa1380680-mRNA-1:cds;Parent=Msa1380680-mRNA-1
Gene Sequence

>Msa1380680

ATGAGAGGAAACCCTCACGTCCGATTTTCAAAGGGGGAGATCCATCTTATTGGATCCTATCCAAATTTTTCGTTTGCTAGGCCCGTAGTTAAAAAACCTACTTTCTTACGATTACGAGGTTCATTCGAATATGAAATCCAATCTTGGAAATACAGTATCCCACTCTTTTTTGCTACTCAAGGTTTCGATACATTTCGAAATAGAGAAATTTCTAGTGGAGCAGGTGCTATACGAGAACAATTAGTTGATCTGGATTTAAGAATTATTATGGATTCTTCGTTGGTAGAATGGAAAGAATTAGGAGAAGAGGGATCCACTGACAATGAAAATGAATGGGAAGATCGAAAAGTAGGAAGAAGAAAGAATTTTTTGGTTCGACGCATGGAATTAGCTAAGCACTTTATCCGAACAAATATAGAACCAGAATGGATGGTTTTATGTCTCTTACCAGTTCTTCCTCCCGAATTGAGACCGATTATTCAAATAGATGGAGGGAAACTAATGAGTTCGGATATTAATGAACTCTATAGAAGAGTTATCTATCGGAACAATACTCTTATTGACCTATTAACAACAAGTAGATCTACACCAGGGGAATTAGTAATGTGTCAAGAAAAATTGGTACAAGAAGCCGTGGATACACTCCTTGATAATGGAATCCGCGGACAACCAATGAGGGACGGTCATAATAAAGTTTACAAATCGTTTTCAGATATAATTGAGGGCAAAGAGGGAAGATTTCGAGAGACTCTGCTTGGAAAACGAGTTGATTATTCGGGGCGTTCTGTTATTGTCGTAGGTCCATCACTTTCATTACATCGATGTGGATTGCCCCGCGAAATAGCAATAGAGCTATTTCAGACATTTCTAATTCGTGGTTTAATTCGAAAACATTTTGCTTCGAACATAGGAGTTGCTAAGAGTAAAATACGGGAAAAAGAACCGATTGTATGGGAAATACTTCAAGAAGTTATGCGGGGGCATCCAGTATTGCTGAATAGAGCGCCTACTTTGCATAGATTGGGCATACAGGCATTTCAACCTATTTTAGTAGAAGGACGTGCTATTTGTTTACATCCATTAGTGTGTAAGGGATTCAATGCAGACTTTGATGGGGATCAAATGGCTGTTCATGTGCCTTTATCTTTGGAGGCTCAAGCAGAAGCTCGTTTACTTATGTTTTCTCATACAAACCTCTTGTCTCCGGCTATTGGGGATCCCATTTCCGTACCAACTCAAGATATGCTTATAGGCCTTTATGTATTAACTAGCGGAAATCGTCGAGGTGGAACTGCCATTAAACGACTTATTAGCAGATTAATAGACCATTTCGGAATGGCATATACATCACACATCCTGGATCAAGTAAAGACTCTAGGGTTCCGTCAAGCTACTGCTACATCTATTTCATTAGGAATTGATGATCTTTTAACAATACCTTCTAAAGGATGGCTAGTCCAAGATGCTGAACAACAAAGTTCTATTTTGGAAAAACATAATCAGTATGGGAATGTACATGCGGTAGAAAAATTACGCCAATCCATTGAAATATGGTATGCTACAAGCGAATATTTGCGACAAGAAATGAATCCTAATTTTAGGATGACTGACCCCTTTAATCCAGTCCATATAATGTCTTTTTCAGGAGCTAGAGGAAATGCATCTCAAGTGCACCAATTAGTCGGAATGAGAGGATTAATGTCAGATCCACAAGGACAAATGATTGATTTACCCATTCAAAGCAATTTACGAGAAGGACTGTCTTTAACAGAATATATAATTTCTTGCTACGGAGCCCGTAAAGGGGTTGTGGATACTGCTGTACGAACATCAGATGCTGGATATCTTACACGTCGACTTGTTGAAGTGGTTCAACACATTGTTGTACGTCGAACAGATTGCGGTACGATTCGCGGGATTTCTGTAAATACCCGAAATGGAATGATACCAGAAAGAATTTTGATACAAACATTAATTGGTCGTGTAGTAGCAGACGATATATATATCGGTTCACGGTGCATTGTCGTTAGAAATCAAGATATTGGAATTGGACTTATCAATCGATTCATAACTTTTCAAACACAACCAATATTTATTCGAACCCCCTTTACCTGTAGGAATACGTCTTGGATCTGCCGATTGTGTTATGGGCGGAGTCCTATTCATGGGGACCTGGTAGAATTGGGAGAAGCTGTAGGTATTATTGCTGGTCAATCTATTGGCGAACCGGGAACTCAACTAACATTAAGAACTTTTCATACTGGTGGAGTATTCACAGGGGGTACTGCGGAATATGTGCGAGCCCCCTCGAATGGAAAAATAAAATTTAATGAAGATTTAGTTCACCCTACACGTACACGTCATGGATATCCTGCTTTTATATGTAATATAGACTTGTATGTAACTATTGAAAGTGACGATATTATACATAACGTGATTATTCCACCAAAAAGTTTTCTATTAGTTCAAAATGATCAATATGTAAAATCAGAACAAGTGATTGCTGAGATCCGCGCGGGAACATATACTTTTAATTTGAAAGAAAGGGTTCGAAAACATATTTATTCTGACTCAGAAGGCGAAATGCATTGGAGTACCGATGTGTACCATGCATCCGAATTTTTGTATAGTAATGTACATATCTTACCAAAAACAAGTCATTTATGGATCTTATCAGGAAAGTCGTGCAGGTCTGATACAATCCATTTTTTACTTCGCAAGGATCAAGATCAAATTAACATTGATTCTCTTTCTACTGGAAAAAGAAATATTTCTAATCTTTTAGTAAGTAATGATGAAGTAAAACGAAAATTATTAAGTTTGAAGACTTTTGGTACAAAAGAAAAGGGGATTAGCAATTATTCAATATTTAATCAAATAATATGTACGGATCATTCTCATTTAATGGATCCTGCTATTTTTCACGATACTTTTTATTTATTGGCCAAAAGACGAAGAAATAGATTTCTTATTCCATTCCAATCGATTCAAGAAGGAAAGAACGAACTAATGCGACCTTCTGGTGTTTCCATTGAAATACCTATCAATGGTATTTTTCATAGAAATAGTATTTTTGCTTATTTCGATGATCCTCAATACAGAAGACAGAATTCAGGAATTACTAAATATAGAACTATAGGAATTCATTCCGTTTTTCAAAAAGAAGATTTCATTGAGTATCGAGGAATCAAAGAATTAAAGCCAAAATACCAAATCAAAGTAGATCGATTTTTTTTTATTCCCGAAGAAGTGCATATTTTACCCGAATCTTCTTCCATAATGGAAAGAGATAATCTGGAACTCAAAGTTGTCAATTATATTCTTTATGGAAATGGAAAATCCATTCGGGGAATTTCCGACACAAGGATTCAATTAGTTCGGACTTGTTTAGTCTTGAATTGGGATCAAGGCAAAAAAAGTACTTCTATTGAGGAGGCCCCCTCTTCCTTTGTTGAAGATTGA
Protein sequence

>Msa1380680

MRGNPHVRFSKGEIHLIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIREQLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWEILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFRQATATSISLGIDDLLTIPSKGWLVQDAEQQSSILEKHNQYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVNTRNGMIPERILIQTLIGRVVADDIYIGSRCIVVRNQDIGIGLINRFITFQTQPIFIRTPFTCRNTSWICRLCYGRSPIHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEYVRAPSNGKIKFNEDLVHPTRTRHGYPAFICNIDLYVTIESDDIIHNVIIPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVRKHIYSDSEGEMHWSTDVYHASEFLYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQINIDSLSTGKRNISNLLVSNDEVKRKLLSLKTFGTKEKGISNYSIFNQIICTDHSHLMDPAIFHDTFYLLAKRRRNRFLIPFQSIQEGKNELMRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQNSGITKYRTIGIHSVFQKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSTSIEEAPSSFVED*