Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380690 | KAH0648988.1 | 78.723 | 47 | 10 | 0 | 1093 | 1139 | 1241 | 1287 | 6.51e-12 | 83.6 |
| Msa1380690 | KAH0648988.1 | 84.072 | 1061 | 144 | 2 | 61 | 1098 | 69 | 1127 | 0.0 | 1835 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380690 | sp|Q8HVY3|RPOC2_SOYBN | 83.550 | 693 | 111 | 2 | 429 | 1118 | 15 | 707 | 0.0 | 1180 |
| Msa1380690 | sp|Q8HVY3|RPOC2_SOYBN | 76.786 | 56 | 12 | 1 | 1084 | 1139 | 792 | 846 | 4.94e-16 | 87.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380690 | A0A7J7LSI3 | 82.222 | 45 | 8 | 0 | 1095 | 1139 | 2219 | 2263 | 7.54e-12 | 82.4 |
| Msa1380690 | A0A7J7LSI3 | 83.937 | 1021 | 150 | 2 | 90 | 1098 | 1084 | 2102 | 0.0 | 1760 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095190 | Msa1380690 | 0.829369 | 5.349827e-55 | -8.615850e-47 |
| Msa0095290 | Msa1380690 | 0.800632 | 1.315659e-48 | -8.615850e-47 |
| Msa1354320 | Msa1380690 | 0.813103 | 3.032602e-51 | -8.615850e-47 |
| Msa1354380 | Msa1380690 | 0.815047 | 1.129466e-51 | -8.615850e-47 |
| Msa1354420 | Msa1380690 | 0.826786 | 2.240971e-54 | -8.615850e-47 |
| Msa1354430 | Msa1380690 | 0.801545 | 8.559968e-49 | -8.615850e-47 |
| Msa1354480 | Msa1380690 | 0.803304 | 3.716822e-49 | -8.615850e-47 |
| Msa1354550 | Msa1380690 | 0.825266 | 5.148442e-54 | -8.615850e-47 |
| Msa1354610 | Msa1380690 | 0.817940 | 2.541152e-52 | -8.615850e-47 |
| Msa1354740 | Msa1380690 | 0.800790 | 1.221886e-48 | -8.615850e-47 |
| Msa1354810 | Msa1380690 | 0.823058 | 1.698953e-53 | -8.615850e-47 |
| Msa1354900 | Msa1380690 | 0.839450 | 1.572872e-57 | -8.615850e-47 |
| Msa1354910 | Msa1380690 | 0.817988 | 2.478036e-52 | -8.615850e-47 |
| Msa1354920 | Msa1380690 | 0.818965 | 1.488102e-52 | -8.615850e-47 |
| Msa1354930 | Msa1380690 | 0.852050 | 5.952104e-61 | -8.615850e-47 |
| Msa1354940 | Msa1380690 | 0.825247 | 5.200307e-54 | -8.615850e-47 |
| Msa1354950 | Msa1380690 | 0.806392 | 8.410170e-50 | -8.615850e-47 |
| Msa1354980 | Msa1380690 | 0.815168 | 1.061574e-51 | -8.615850e-47 |
| Msa1354990 | Msa1380690 | 0.809084 | 2.253498e-50 | -8.615850e-47 |
| Msa1355070 | Msa1380690 | 0.851799 | 7.013177e-61 | -8.615850e-47 |
| Msa1355080 | Msa1380690 | 0.832492 | 9.166449e-56 | -8.615850e-47 |
| Msa1355090 | Msa1380690 | 0.819389 | 1.191459e-52 | -8.615850e-47 |
| Msa1355100 | Msa1380690 | 0.853182 | 2.829861e-61 | -8.615850e-47 |
| Msa1355110 | Msa1380690 | 0.833129 | 6.368517e-56 | -8.615850e-47 |
| Msa1365890 | Msa1380690 | 0.823662 | 1.227977e-53 | -8.615850e-47 |
| Msa1365950 | Msa1380690 | 0.804078 | 2.567301e-49 | -8.615850e-47 |
| Msa1366040 | Msa1380690 | 0.803583 | 3.253271e-49 | -8.615850e-47 |
| Msa1366050 | Msa1380690 | 0.809939 | 1.476339e-50 | -8.615850e-47 |
| Msa1366080 | Msa1380690 | 0.842972 | 1.864815e-58 | -8.615850e-47 |
| Msa1368230 | Msa1380690 | 0.815646 | 8.309878e-52 | -8.615850e-47 |
| Msa1368290 | Msa1380690 | 0.834210 | 3.420081e-56 | -8.615850e-47 |
| Msa1368300 | Msa1380690 | 0.816419 | 5.584453e-52 | -8.615850e-47 |
| Msa1380570 | Msa1380690 | 0.816392 | 5.662294e-52 | -8.615850e-47 |
| Msa1380590 | Msa1380690 | 0.849163 | 3.856347e-60 | -8.615850e-47 |
| Msa1380600 | Msa1380690 | 0.816306 | 5.918712e-52 | -8.615850e-47 |
| Msa1380610 | Msa1380690 | 0.800483 | 1.411415e-48 | -8.615850e-47 |
| Msa1380620 | Msa1380690 | 0.882753 | 7.998986e-71 | -8.615850e-47 |
| Msa1380630 | Msa1380690 | 0.831775 | 1.378451e-55 | -8.615850e-47 |
| Msa1380680 | Msa1380690 | 0.892568 | 1.407965e-74 | -8.615850e-47 |
| Msa1380690 | Msa1380700 | 0.827203 | 1.780916e-54 | -8.615850e-47 |
| Msa1380690 | Msa1385410 | 0.813571 | 2.393251e-51 | -8.615850e-47 |
| Msa1380690 | Msa1391100 | 0.805009 | 1.641384e-49 | -8.615850e-47 |
| Msa1380690 | Msa1391170 | 0.812250 | 4.660317e-51 | -8.615850e-47 |
| Msa1380690 | Msa1391220 | 0.817655 | 2.945661e-52 | -8.615850e-47 |
| Msa1380690 | Msa1391230 | 0.803306 | 3.712586e-49 | -8.615850e-47 |
| Msa1380690 | Msa1394040 | 0.854945 | 8.774172e-62 | -8.615850e-47 |
| Msa1380690 | Msa1394060 | 0.817056 | 4.019864e-52 | -8.615850e-47 |
| Msa1380690 | Msa1394150 | 0.850223 | 1.950643e-60 | -8.615850e-47 |
| Msa1380690 | Msa1394160 | 0.828832 | 7.218461e-55 | -8.615850e-47 |
| Msa1380690 | Msa1394210 | 0.802267 | 6.083659e-49 | -8.615850e-47 |
| Msa1380690 | Msa1394230 | 0.860703 | 1.716333e-63 | -8.615850e-47 |
| Msa1380690 | Msa1394250 | 0.817174 | 3.781652e-52 | -8.615850e-47 |
| Msa0139760 | Msa1380690 | 0.831590 | 1.531356e-55 | -8.615850e-47 |
| Msa0139790 | Msa1380690 | 0.808124 | 3.612485e-50 | -8.615850e-47 |
| Msa0139800 | Msa1380690 | 0.906770 | 1.040535e-80 | -8.615850e-47 |
| Msa0139810 | Msa1380690 | 0.912555 | 1.702621e-83 | -8.615850e-47 |
| Msa0139830 | Msa1380690 | 0.806865 | 6.684350e-50 | -8.615850e-47 |
| Msa0173880 | Msa1380690 | 0.809464 | 1.867730e-50 | -8.615850e-47 |
| Msa0202640 | Msa1380690 | 0.834960 | 2.215888e-56 | -8.615850e-47 |
| Msa0221840 | Msa1380690 | 0.801340 | 9.430515e-49 | -8.615850e-47 |
| Msa1305090 | Msa1380690 | 0.843313 | 1.513327e-58 | -8.615850e-47 |
| Msa1305100 | Msa1380690 | 0.849672 | 2.781826e-60 | -8.615850e-47 |
| Msa1305150 | Msa1380690 | 0.813729 | 2.208287e-51 | -8.615850e-47 |
| Msa0398630 | Msa1380690 | 0.832257 | 1.048155e-55 | -8.615850e-47 |
| Msa0983630 | Msa1380690 | 0.840783 | 7.062284e-58 | -8.615850e-47 |
| Msa0983700 | Msa1380690 | 0.804998 | 1.650233e-49 | -8.615850e-47 |
| Msa0983720 | Msa1380690 | 0.841620 | 4.254028e-58 | -8.615850e-47 |
| Msa1022050 | Msa1380690 | 0.824528 | 7.687933e-54 | -8.615850e-47 |
| Msa1086070 | Msa1380690 | 0.846343 | 2.306028e-59 | -8.615850e-47 |
| Msa1086080 | Msa1380690 | 0.816660 | 4.931009e-52 | -8.615850e-47 |
| Msa1086090 | Msa1380690 | 0.814861 | 1.241632e-51 | -8.615850e-47 |
| Msa1086100 | Msa1380690 | 0.846062 | 2.749465e-59 | -8.615850e-47 |
| Msa1086110 | Msa1380690 | 0.835087 | 2.058226e-56 | -8.615850e-47 |
| Msa1086130 | Msa1380690 | 0.815778 | 7.765054e-52 | -8.615850e-47 |
| Msa1086140 | Msa1380690 | 0.856112 | 4.010065e-62 | -8.615850e-47 |
| Msa1086150 | Msa1380690 | 0.856643 | 2.800167e-62 | -8.615850e-47 |
| Msa1086180 | Msa1380690 | 0.847785 | 9.281876e-60 | -8.615850e-47 |
| Msa1086190 | Msa1380690 | 0.820267 | 7.507953e-53 | -8.615850e-47 |
| Msa1086200 | Msa1380690 | 0.821713 | 3.487746e-53 | -8.615850e-47 |
| Msa1086210 | Msa1380690 | 0.865883 | 4.275396e-65 | -8.615850e-47 |
| Msa1086220 | Msa1380690 | 0.819344 | 1.220172e-52 | -8.615850e-47 |
| Msa1086250 | Msa1380690 | 0.909331 | 6.413681e-82 | -8.615850e-47 |
| Msa1086270 | Msa1380690 | 0.831761 | 1.389988e-55 | -8.615850e-47 |
| Msa1086280 | Msa1380690 | 0.857113 | 2.036112e-62 | -8.615850e-47 |
| Msa1086380 | Msa1380690 | 0.855726 | 5.198221e-62 | -8.615850e-47 |
| Msa1086450 | Msa1380690 | 0.873102 | 1.906484e-67 | -8.615850e-47 |
| Msa1086470 | Msa1380690 | 0.859855 | 3.098817e-63 | -8.615850e-47 |
| Msa1086550 | Msa1380690 | 0.812618 | 3.872264e-51 | -8.615850e-47 |
| Msa1086600 | Msa1380690 | 0.815881 | 7.364977e-52 | -8.615850e-47 |
| Msa1086720 | Msa1380690 | 0.819986 | 8.706797e-53 | -8.615850e-47 |
| Msa1086790 | Msa1380690 | 0.807693 | 4.461894e-50 | -8.615850e-47 |
| Msa1086800 | Msa1380690 | 0.813963 | 1.961726e-51 | -8.615850e-47 |
| Msa1086860 | Msa1380690 | 0.811924 | 5.488462e-51 | -8.615850e-47 |
| Msa1086880 | Msa1380690 | 0.857711 | 1.354751e-62 | -8.615850e-47 |
| Msa1086890 | Msa1380690 | 0.816820 | 4.539761e-52 | -8.615850e-47 |
| Msa1086900 | Msa1380690 | 0.819624 | 1.053161e-52 | -8.615850e-47 |
| Msa1086910 | Msa1380690 | 0.855317 | 6.842227e-62 | -8.615850e-47 |
| Msa1086960 | Msa1380690 | 0.809249 | 2.076896e-50 | -8.615850e-47 |
| Msa1086970 | Msa1380690 | 0.810430 | 1.157465e-50 | -8.615850e-47 |
| Msa1087030 | Msa1380690 | 0.817506 | 3.183923e-52 | -8.615850e-47 |
| Msa1087110 | Msa1380690 | 0.801614 | 8.285446e-49 | -8.615850e-47 |
| Msa1091700 | Msa1380690 | 0.802198 | 6.286703e-49 | -8.615850e-47 |
| Msa0268170 | Msa1380690 | 0.850706 | 1.427788e-60 | -8.615850e-47 |
| Msa0268190 | Msa1380690 | 0.806723 | 7.162793e-50 | -8.615850e-47 |
| Msa0268250 | Msa1380690 | 0.825010 | 5.916944e-54 | -8.615850e-47 |
| Msa0268300 | Msa1380690 | 0.826632 | 2.438823e-54 | -8.615850e-47 |
| Msa0268310 | Msa1380690 | 0.805156 | 1.529738e-49 | -8.615850e-47 |
| Msa0268390 | Msa1380690 | 0.859480 | 4.016239e-63 | -8.615850e-47 |
| Msa0268400 | Msa1380690 | 0.806042 | 9.965596e-50 | -8.615850e-47 |
| Msa0268410 | Msa1380690 | 0.852502 | 4.426628e-61 | -8.615850e-47 |
| Msa0268430 | Msa1380690 | 0.816921 | 4.309730e-52 | -8.615850e-47 |
| Msa0268530 | Msa1380690 | 0.817067 | 3.996140e-52 | -8.615850e-47 |
| Msa0268550 | Msa1380690 | 0.865540 | 5.482684e-65 | -8.615850e-47 |
| Msa0268560 | Msa1380690 | 0.823348 | 1.453891e-53 | -8.615850e-47 |
| Msa0268570 | Msa1380690 | 0.820454 | 6.801023e-53 | -8.615850e-47 |
| Msa0268580 | Msa1380690 | 0.849519 | 3.069601e-60 | -8.615850e-47 |
| Msa0268590 | Msa1380690 | 0.813985 | 1.940156e-51 | -8.615850e-47 |
| Msa0268610 | Msa1380690 | 0.876850 | 1.005938e-68 | -8.615850e-47 |
| Msa0268630 | Msa1380690 | 0.818305 | 2.100787e-52 | -8.615850e-47 |
| Msa0268640 | Msa1380690 | 0.827709 | 1.347127e-54 | -8.615850e-47 |
| Msa0268720 | Msa1380690 | 0.805993 | 1.020741e-49 | -8.615850e-47 |
| Msa0268740 | Msa1380690 | 0.850496 | 1.636017e-60 | -8.615850e-47 |
| Msa0268750 | Msa1380690 | 0.814706 | 1.343784e-51 | -8.615850e-47 |
| Msa0268780 | Msa1380690 | 0.875252 | 3.566918e-68 | -8.615850e-47 |
| Msa0268830 | Msa1380690 | 0.850065 | 2.160653e-60 | -8.615850e-47 |
| Msa0268840 | Msa1380690 | 0.864444 | 1.210354e-64 | -8.615850e-47 |
| Msa0268860 | Msa1380690 | 0.807809 | 4.215156e-50 | -8.615850e-47 |
| Msa0268940 | Msa1380690 | 0.856494 | 3.097168e-62 | -8.615850e-47 |
| Msa0268950 | Msa1380690 | 0.823528 | 1.319782e-53 | -8.615850e-47 |
| Msa0268960 | Msa1380690 | 0.804765 | 1.846053e-49 | -8.615850e-47 |
| Msa0268990 | Msa1380690 | 0.876291 | 1.569865e-68 | -8.615850e-47 |
| Msa0269040 | Msa1380690 | 0.837844 | 4.089815e-57 | -8.615850e-47 |
| Msa0269050 | Msa1380690 | 0.860308 | 2.260775e-63 | -8.615850e-47 |
| Msa0269070 | Msa1380690 | 0.811559 | 6.588943e-51 | -8.615850e-47 |
| Msa0269130 | Msa1380690 | 0.804522 | 2.074697e-49 | -8.615850e-47 |
| Msa0344150 | Msa1380690 | 0.843512 | 1.338506e-58 | -8.615850e-47 |
| Msa0344190 | Msa1380690 | 0.837498 | 5.018281e-57 | -8.615850e-47 |
| Msa0344280 | Msa1380690 | 0.802652 | 5.067435e-49 | -8.615850e-47 |
| Msa0344300 | Msa1380690 | 0.866572 | 2.584822e-65 | -8.615850e-47 |
| Msa0344310 | Msa1380690 | 0.834759 | 2.489143e-56 | -8.615850e-47 |
| Msa1143120 | Msa1380690 | 0.849107 | 3.996897e-60 | -8.615850e-47 |
| Msa1143130 | Msa1380690 | 0.841109 | 5.798568e-58 | -8.615850e-47 |
| Msa1143160 | Msa1380690 | 0.825180 | 5.395774e-54 | -8.615850e-47 |
| Msa1143170 | Msa1380690 | 0.822097 | 2.842652e-53 | -8.615850e-47 |
| Msa1143180 | Msa1380690 | 0.861285 | 1.142637e-63 | -8.615850e-47 |
| Msa1143190 | Msa1380690 | 0.859434 | 4.147334e-63 | -8.615850e-47 |
| Msa0484000 | Msa1380690 | 0.809859 | 1.536452e-50 | -8.615850e-47 |
| Msa0484020 | Msa1380690 | 0.847420 | 1.169464e-59 | -8.615850e-47 |
| Msa0582500 | Msa1380690 | 0.827201 | 1.783497e-54 | -8.615850e-47 |
| Msa0582510 | Msa1380690 | 0.842877 | 1.977246e-58 | -8.615850e-47 |
| Msa0582520 | Msa1380690 | 0.847921 | 8.514408e-60 | -8.615850e-47 |
| Msa0582540 | Msa1380690 | 0.808414 | 3.133793e-50 | -8.615850e-47 |
| Msa0582630 | Msa1380690 | 0.869173 | 3.776172e-66 | -8.615850e-47 |
| Msa0582640 | Msa1380690 | 0.814680 | 1.362180e-51 | -8.615850e-47 |
| Msa0582650 | Msa1380690 | 0.823831 | 1.120862e-53 | -8.615850e-47 |
| Msa0582660 | Msa1380690 | 0.851116 | 1.094053e-60 | -8.615850e-47 |
| Msa0582670 | Msa1380690 | 0.840773 | 7.105357e-58 | -8.615850e-47 |
| Msa0582680 | Msa1380690 | 0.833426 | 5.369151e-56 | -8.615850e-47 |
| Msa0582690 | Msa1380690 | 0.846468 | 2.131878e-59 | -8.615850e-47 |
| Msa0582700 | Msa1380690 | 0.842135 | 3.111185e-58 | -8.615850e-47 |
| Msa0582750 | Msa1380690 | 0.862083 | 6.513716e-64 | -8.615850e-47 |
| Msa0582760 | Msa1380690 | 0.830966 | 2.180846e-55 | -8.615850e-47 |
| Msa0582770 | Msa1380690 | 0.809441 | 1.889547e-50 | -8.615850e-47 |
| Msa0582780 | Msa1380690 | 0.862896 | 3.662953e-64 | -8.615850e-47 |
| Msa0582790 | Msa1380690 | 0.815718 | 8.009427e-52 | -8.615850e-47 |
| Msa0582800 | Msa1380690 | 0.840038 | 1.105994e-57 | -8.615850e-47 |
| Msa0582810 | Msa1380690 | 0.843835 | 1.097129e-58 | -8.615850e-47 |
| Msa0582820 | Msa1380690 | 0.849306 | 3.518480e-60 | -8.615850e-47 |
| Msa0582840 | Msa1380690 | 0.802639 | 5.098470e-49 | -8.615850e-47 |
| Msa0582890 | Msa1380690 | 0.809163 | 2.167151e-50 | -8.615850e-47 |
| Msa0582910 | Msa1380690 | 0.846255 | 2.436633e-59 | -8.615850e-47 |
| Msa0582920 | Msa1380690 | 0.810840 | 9.438476e-51 | -8.615850e-47 |
| Msa0582930 | Msa1380690 | 0.831407 | 1.699319e-55 | -8.615850e-47 |
| Msa0591380 | Msa1380690 | 0.800594 | 1.339639e-48 | -8.615850e-47 |
| Msa0867690 | Msa1380690 | 0.820306 | 7.353388e-53 | -8.615850e-47 |
| Msa0908220 | Msa1380690 | 0.816684 | 4.870023e-52 | -8.615850e-47 |
| Msa0908310 | Msa1380690 | 0.827820 | 1.266395e-54 | -8.615850e-47 |
| Msa0908370 | Msa1380690 | 0.822517 | 2.271198e-53 | -8.615850e-47 |
| Msa0908430 | Msa1380690 | 0.815181 | 1.054597e-51 | -8.615850e-47 |
| Msa0908440 | Msa1380690 | 0.812802 | 3.529399e-51 | -8.615850e-47 |
| Msa0908480 | Msa1380690 | 0.806355 | 8.565674e-50 | -8.615850e-47 |
| Msa0908530 | Msa1380690 | 0.823773 | 1.156562e-53 | -8.615850e-47 |
| Msa0908540 | Msa1380690 | 0.804535 | 2.062307e-49 | -8.615850e-47 |
| Msa0908590 | Msa1380690 | 0.815711 | 8.038619e-52 | -8.615850e-47 |
| Msa0908600 | Msa1380690 | 0.801403 | 9.153991e-49 | -8.615850e-47 |
| Msa0908650 | Msa1380690 | 0.821554 | 3.796069e-53 | -8.615850e-47 |
| Msa0908660 | Msa1380690 | 0.805758 | 1.143562e-49 | -8.615850e-47 |
| Msa0908720 | Msa1380690 | 0.811449 | 6.960924e-51 | -8.615850e-47 |
| Msa0908730 | Msa1380690 | 0.804996 | 1.651590e-49 | -8.615850e-47 |
| Msa0924850 | Msa1380690 | 0.805018 | 1.634613e-49 | -8.615850e-47 |
| Msa0924870 | Msa1380690 | 0.819761 | 9.802774e-53 | -8.615850e-47 |
| Msa0924880 | Msa1380690 | 0.817775 | 2.768366e-52 | -8.615850e-47 |
| Msa0924940 | Msa1380690 | 0.827105 | 1.880085e-54 | -8.615850e-47 |
| Msa0931070 | Msa1380690 | 0.854716 | 1.022567e-61 | -8.615850e-47 |
| Msa0931080 | Msa1380690 | 0.868746 | 5.193105e-66 | -8.615850e-47 |
| Msa0931110 | Msa1380690 | 0.816439 | 5.527606e-52 | -8.615850e-47 |
| Msa0931120 | Msa1380690 | 0.809382 | 1.945694e-50 | -8.615850e-47 |
| Msa0931130 | Msa1380690 | 0.837403 | 5.306270e-57 | -8.615850e-47 |
| Msa0931140 | Msa1380690 | 0.884294 | 2.167666e-71 | -8.615850e-47 |
| Msa0931160 | Msa1380690 | 0.806503 | 7.971439e-50 | -8.615850e-47 |
| Msa0931190 | Msa1380690 | 0.807605 | 4.659300e-50 | -8.615850e-47 |
| Msa0931210 | Msa1380690 | 0.831078 | 2.046807e-55 | -8.615850e-47 |
| Msa0931220 | Msa1380690 | 0.816054 | 6.737182e-52 | -8.615850e-47 |
| Msa0931230 | Msa1380690 | 0.817115 | 3.899027e-52 | -8.615850e-47 |
| Msa0931240 | Msa1380690 | 0.850794 | 1.348658e-60 | -8.615850e-47 |
| Msa0931250 | Msa1380690 | 0.837707 | 4.435458e-57 | -8.615850e-47 |
| Msa0931260 | Msa1380690 | 0.859093 | 5.249364e-63 | -8.615850e-47 |
| Msa0931270 | Msa1380690 | 0.866365 | 3.006769e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380690 | MtrunA17_CPg0493001 | 98.060 | 670 | 13 | 0 | 429 | 1098 | 19 | 688 | 0.0 | 1361 |
| Msa1380690 | MtrunA17_CPg0493001 | 56.701 | 97 | 36 | 3 | 1056 | 1147 | 761 | 856 | 4.86e-20 | 97.1 |
| Msa1380690 | MtrunA17_Chr4g0016671 | 98.060 | 670 | 13 | 0 | 429 | 1098 | 19 | 688 | 0.0 | 1361 |
| Msa1380690 | MtrunA17_Chr4g0016671 | 56.701 | 97 | 36 | 3 | 1056 | 1147 | 761 | 856 | 4.86e-20 | 97.1 |
| Msa1380690 | MtrunA17_Chr3g0108441 | 98.387 | 434 | 5 | 1 | 1 | 432 | 1 | 434 | 0.0 | 872 |
| Msa1380690 | MtrunA17_Chr3g0108491 | 98.387 | 434 | 5 | 1 | 1 | 432 | 1 | 434 | 0.0 | 870 |
| Msa1380690 | MtrunA17_CPg0493021 | 98.387 | 434 | 5 | 1 | 1 | 432 | 1 | 434 | 0.0 | 870 |
| Msa1380690 | MtrunA17_Chr4g0016661 | 98.387 | 434 | 5 | 1 | 1 | 432 | 1 | 434 | 0.0 | 870 |
| Msa1380690 | MtrunA17_Chr4g0015581 | 88.208 | 424 | 7 | 1 | 529 | 952 | 1 | 381 | 0.0 | 756 |
| Msa1380690 | MtrunA17_Chr3g0095741 | 96.259 | 294 | 11 | 0 | 805 | 1098 | 8 | 301 | 0.0 | 578 |
| Msa1380690 | MtrunA17_Chr3g0095741 | 86.792 | 53 | 7 | 0 | 1095 | 1147 | 416 | 468 | 1.28e-20 | 96.7 |
| Msa1380690 | MtrunA17_Chr8g0342181 | 60.641 | 343 | 60 | 4 | 90 | 432 | 1 | 268 | 4.99e-118 | 367 |
| Msa1380690 | MtrunA17_Chr4g0015551 | 75.000 | 212 | 8 | 1 | 116 | 327 | 5 | 171 | 9.54e-95 | 299 |
| Msa1380690 | MtrunA17_Chr4g0015591 | 63.306 | 248 | 31 | 4 | 960 | 1147 | 1 | 248 | 1.60e-84 | 290 |
| Msa1380690 | MtrunA17_Chr3g0096371 | 95.652 | 115 | 5 | 0 | 168 | 282 | 1 | 115 | 9.51e-69 | 225 |
| Msa1380690 | MtrunA17_Chr4g0002751 | 82.796 | 93 | 16 | 0 | 128 | 220 | 1 | 93 | 9.89e-44 | 153 |
| Msa1380690 | MtrunA17_Chr2g0318321 | 91.667 | 60 | 5 | 0 | 426 | 485 | 35 | 94 | 4.07e-30 | 115 |
| Msa1380690 | MtrunA17_Chr4g0030401 | 28.247 | 308 | 191 | 6 | 140 | 423 | 248 | 549 | 3.74e-29 | 126 |
| Msa1380690 | MtrunA17_Chr4g0030391 | 28.803 | 309 | 188 | 7 | 140 | 423 | 247 | 548 | 5.77e-29 | 125 |
| Msa1380690 | MtrunA17_Chr5g0406121 | 28.526 | 312 | 190 | 6 | 141 | 423 | 241 | 548 | 1.33e-22 | 105 |
| Msa1380690 | MtrunA17_Chr4g0044991 | 25.949 | 316 | 183 | 7 | 151 | 423 | 317 | 624 | 2.45e-19 | 94.7 |
| Msa1380690 | MtrunA17_Chr4g0002761 | 66.667 | 54 | 18 | 0 | 375 | 428 | 1 | 54 | 7.20e-15 | 70.9 |
| Msa1380690 | MtrunA17_Chr4g0015571 | 94.286 | 35 | 2 | 0 | 426 | 460 | 16 | 50 | 1.74e-14 | 68.9 |
| Msa1380690 | MtrunA17_Chr8g0353071 | 28.053 | 303 | 186 | 10 | 145 | 422 | 211 | 506 | 8.48e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380690 | ATCG00170.1 | 81.259 | 667 | 123 | 1 | 430 | 1094 | 16 | 682 | 0.0 | 1113 |
| Msa1380690 | ATCG00170.1 | 68.000 | 50 | 16 | 0 | 1095 | 1144 | 802 | 851 | 1.14e-13 | 76.6 |
| Msa1380690 | ATCG00180.1 | 91.768 | 413 | 32 | 1 | 20 | 432 | 142 | 552 | 0.0 | 783 |
| Msa1380690 | AT5G60040.1 | 28.710 | 310 | 188 | 5 | 141 | 423 | 250 | 553 | 4.39e-28 | 123 |
| Msa1380690 | AT5G60040.2 | 28.710 | 310 | 188 | 5 | 141 | 423 | 260 | 563 | 5.61e-28 | 123 |
| Msa1380690 | AT4G35800.2 | 28.710 | 310 | 192 | 5 | 141 | 423 | 242 | 549 | 9.89e-24 | 109 |
| Msa1380690 | AT4G35800.1 | 28.710 | 310 | 192 | 5 | 141 | 423 | 242 | 549 | 9.89e-24 | 109 |
| Msa1380690 | AT3G57660.2 | 25.600 | 375 | 215 | 12 | 151 | 479 | 335 | 691 | 6.86e-19 | 94.0 |
| Msa1380690 | AT3G57660.2 | 28.458 | 253 | 139 | 10 | 540 | 756 | 923 | 1169 | 9.22e-15 | 80.1 |
| Msa1380690 | AT3G57660.1 | 25.600 | 375 | 215 | 12 | 151 | 479 | 348 | 704 | 7.06e-19 | 93.6 |
| Msa1380690 | AT3G57660.1 | 28.458 | 253 | 139 | 10 | 540 | 756 | 936 | 1182 | 9.40e-15 | 80.1 |
| Msa1380690 | AT1G63020.3 | 23.577 | 369 | 237 | 11 | 79 | 422 | 152 | 500 | 5.38e-14 | 77.8 |
| Msa1380690 | AT1G63020.1 | 23.577 | 369 | 237 | 11 | 79 | 422 | 152 | 500 | 5.54e-14 | 77.8 |
| Msa1380690 | AT1G63020.2 | 23.577 | 369 | 237 | 11 | 79 | 422 | 152 | 500 | 5.54e-14 | 77.8 |
| Msa1380690 | AT1G63020.4 | 23.577 | 369 | 237 | 11 | 79 | 422 | 152 | 500 | 6.24e-14 | 77.4 |
| Msa1380690 | AT1G63020.5 | 27.604 | 192 | 123 | 3 | 247 | 422 | 1 | 192 | 8.69e-13 | 73.6 |
| Msa1380690 | AT2G40030.1 | 29.016 | 193 | 121 | 3 | 246 | 422 | 310 | 502 | 8.17e-11 | 67.4 |
| Msa1380690 | AT2G40030.2 | 29.016 | 193 | 121 | 3 | 246 | 422 | 310 | 502 | 9.41e-11 | 67.0 |
Find 231 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACTTTGATTTGGTATTT+TGG | 0.149348 | tig0020386:+104454 | None:intergenic |
| GTTTGTATCAAAATTCTTTC+TGG | 0.155430 | tig0020386:+105708 | None:intergenic |
| TTCTGGTATCATTCCATTTC+GGG | 0.158141 | tig0020386:+105725 | None:intergenic |
| TGAACAACAAAGTTCTATTT+TGG | 0.177929 | tig0020386:-106189 | Msa1380690:CDS |
| GTTGTCAATTATATTCTTTA+TGG | 0.179224 | tig0020386:-103993 | Msa1380690:CDS |
| TACGGATCATTCTCATTTAA+TGG | 0.188994 | tig0020386:-104770 | Msa1380690:CDS |
| TCTGGATTTAAGAATTATTA+TGG | 0.190370 | tig0020386:-108040 | Msa1380690:CDS |
| TCTGCTAATAAGTCGTTTAA+TGG | 0.223864 | tig0020386:+106361 | None:intergenic |
| ACCTCTTGTCTCCGGCTATT+GGG | 0.225839 | tig0020386:-107096 | Msa1380690:CDS |
| AAATCTATTTCTTCGTCTTT+TGG | 0.240397 | tig0020386:+104711 | None:intergenic |
| ATCCTCTCATTCCGACTAAT+TGG | 0.248879 | tig0020386:+105982 | None:intergenic |
| ACTATTATTCCGTACCATTA+TGG | 0.259697 | tig0020386:+104381 | None:intergenic |
| TGTTCATGTGCCTTTATCTT+TGG | 0.264426 | tig0020386:-107161 | Msa1380690:CDS |
| CCAACTCAAGATATGCTTAT+AGG | 0.271742 | tig0020386:-107058 | Msa1380690:CDS |
| CATTATATGGACTGGATTAA+AGG | 0.289410 | tig0020386:+106043 | None:intergenic |
| AATTATATTCTTTATGGAAA+TGG | 0.289554 | tig0020386:-103987 | Msa1380690:CDS |
| AACCTCTTGTCTCCGGCTAT+TGG | 0.290298 | tig0020386:-107097 | Msa1380690:CDS |
| GCACGTCCTTCTACTAAAAT+AGG | 0.292699 | tig0020386:+107247 | None:intergenic |
| GGATCTGCCGATTGTGTTAT+GGG | 0.297223 | tig0020386:-105527 | Msa1380690:CDS |
| TTTCTGGTATCATTCCATTT+CGG | 0.299397 | tig0020386:+105724 | None:intergenic |
| TAGATCTACTTGTTGTTAAT+AGG | 0.299908 | tig0020386:+107725 | None:intergenic |
| AGTCATTTATGGATCTTATC+AGG | 0.301174 | tig0020386:-105000 | Msa1380690:CDS |
| TGGATCTGCCGATTGTGTTA+TGG | 0.301508 | tig0020386:-105528 | Msa1380690:CDS |
| GGGTCAGTCATCCTAAAATT+AGG | 0.301712 | tig0020386:+106065 | None:intergenic |
| GGACTTGTTTAGTCTTGAAT+TGG | 0.302268 | tig0020386:-103920 | Msa1380690:CDS |
| AGCGCCTACTTTGCATAGAT+TGG | 0.308716 | tig0020386:-107287 | Msa1380690:CDS |
| CCTCCATCTATTTGAATAAT+CGG | 0.310599 | tig0020386:+107817 | None:intergenic |
| TTGGTAGAATGGAAAGAATT+AGG | 0.313946 | tig0020386:-108009 | Msa1380690:CDS |
| TCATGGGGACCTGGTAGAAT+TGG | 0.318933 | tig0020386:-105493 | Msa1380690:CDS |
| AAAATCGATCTACTTTGATT+TGG | 0.319610 | tig0020386:+104446 | None:intergenic |
| ACCCGAATCTTCTTCCATAA+TGG | 0.320662 | tig0020386:-104395 | Msa1380690:intron |
| TTCTCGTAAATTGCTTTGAA+TGG | 0.322270 | tig0020386:+105923 | None:intergenic |
| TTATTAAGTTTGAAGACTTT+TGG | 0.326721 | tig0020386:-104844 | Msa1380690:CDS |
| TTTACATCCATTAGTGTGTA+AGG | 0.327520 | tig0020386:-107218 | Msa1380690:CDS |
| CAGTATCCACAACCCCTTTA+CGG | 0.329838 | tig0020386:+105859 | None:intergenic |
| AACTTTGTTGTTCAGCATCT+TGG | 0.334259 | tig0020386:+106198 | None:intergenic |
| AGAAATCAAGATATTGGAAT+TGG | 0.334567 | tig0020386:-105627 | Msa1380690:CDS |
| TACGCCAATCCATTGAAATA+TGG | 0.339395 | tig0020386:-106124 | Msa1380690:CDS |
| ATTATTGCTGGTCAATCTAT+TGG | 0.340445 | tig0020386:-105456 | Msa1380690:CDS |
| TTGAATAATCGGTCTCAATT+CGG | 0.341142 | tig0020386:+107828 | None:intergenic |
| GTCGTTAGAAATCAAGATAT+TGG | 0.341954 | tig0020386:-105633 | Msa1380690:CDS |
| GGAAAACGAGTTGATTATTC+GGG | 0.350240 | tig0020386:-107532 | Msa1380690:CDS |
| AGACCGATTATTCAAATAGA+TGG | 0.352617 | tig0020386:-107820 | Msa1380690:CDS |
| ACTGCTACATCTATTTCATT+AGG | 0.354727 | tig0020386:-106263 | Msa1380690:CDS |
| TGGAAAACGAGTTGATTATT+CGG | 0.358566 | tig0020386:-107533 | Msa1380690:CDS |
| ATCTTGAGTTGGTACGGAAA+TGG | 0.362284 | tig0020386:+107069 | None:intergenic |
| GGATACTGTATTTCCAAGAT+TGG | 0.364284 | tig0020386:+108151 | None:intergenic |
| TGAATAATCGGTCTCAATTC+GGG | 0.364643 | tig0020386:+107829 | None:intergenic |
| CTTAATGTTAGTTGAGTTCC+CGG | 0.369671 | tig0020386:+105429 | None:intergenic |
| ATTCCAGGAAAGAGATAATC+TGG | 0.369993 | tig0020386:-104024 | Msa1380690:intron |
| ATTATATGGACTGGATTAAA+GGG | 0.370361 | tig0020386:+106044 | None:intergenic |
| AACATTGATTCTCTTTCTAC+TGG | 0.378165 | tig0020386:-104919 | Msa1380690:CDS |
| GGTAAAATATGCACTTCTTC+GGG | 0.379845 | tig0020386:+104415 | None:intergenic |
| TGGACTAGCCATCCTTTAGA+AGG | 0.382153 | tig0020386:+106218 | None:intergenic |
| TTCCGCTAGTTAATACATAA+AGG | 0.382446 | tig0020386:+107035 | None:intergenic |
| TTGAATCCCTTACACACTAA+TGG | 0.385461 | tig0020386:+107211 | None:intergenic |
| GTGGATACACTCCTTGATAA+TGG | 0.387696 | tig0020386:-107655 | Msa1380690:CDS |
| TACCATTATGGAAGAAGATT+CGG | 0.389569 | tig0020386:+104393 | None:intergenic |
| ATTTCTGTAAATACCCGAAA+TGG | 0.389944 | tig0020386:-105738 | Msa1380690:CDS |
| GGGTAAAATATGCACTTCTT+CGG | 0.392587 | tig0020386:+104414 | None:intergenic |
| TTTCAGACATTTCTAATTCG+TGG | 0.395006 | tig0020386:-107433 | Msa1380690:CDS |
| GACTTGTTTAGTCTTGAATT+GGG | 0.395976 | tig0020386:-103919 | Msa1380690:CDS |
| TGGAAATGGAAAATCCATTC+GGG | 0.398927 | tig0020386:-103973 | Msa1380690:CDS |
| ACGAGAACAATTAGTTGATC+TGG | 0.400881 | tig0020386:-108058 | Msa1380690:CDS |
| GGCGCTCTATTCAGCAATAC+TGG | 0.401200 | tig0020386:+107304 | None:intergenic |
| AGTATCCACAACCCCTTTAC+GGG | 0.401249 | tig0020386:+105860 | None:intergenic |
| AGACATAAAACCATCCATTC+TGG | 0.402557 | tig0020386:+107868 | None:intergenic |
| TGGTCAATCTATTGGCGAAC+CGG | 0.405693 | tig0020386:-105448 | Msa1380690:CDS |
| ATTACTAAATATAGAACTAT+AGG | 0.405919 | tig0020386:-104538 | Msa1380690:CDS |
| TGGATTCTTCGTTGGTAGAA+TGG | 0.407733 | tig0020386:-108020 | Msa1380690:CDS |
| GGATTCAATGCAGACTTTGA+TGG | 0.407959 | tig0020386:-107196 | Msa1380690:CDS |
| TCATGTGCCTTTATCTTTGG+AGG | 0.409231 | tig0020386:-107158 | Msa1380690:CDS |
| CTTGCTACGGAGCCCGTAAA+GGG | 0.410011 | tig0020386:-105872 | Msa1380690:CDS |
| AGCAGATTAATAGACCATTT+CGG | 0.411046 | tig0020386:-106344 | Msa1380690:CDS |
| GCTTGAGCCTCCAAAGATAA+AGG | 0.413525 | tig0020386:+107151 | None:intergenic |
| AACGAACTAATGCGACCTTC+TGG | 0.414791 | tig0020386:-104655 | Msa1380690:CDS |
| TCTTTCCTTCTTGAATCGAT+TGG | 0.414961 | tig0020386:+104677 | None:intergenic |
| TCGAATATGAAATCCAATCT+TGG | 0.418713 | tig0020386:-108164 | Msa1380690:CDS |
| GACGTATTCCTACAGGTAAA+GGG | 0.421613 | tig0020386:+105552 | None:intergenic |
| ACCATTGATAGGTATTTCAA+TGG | 0.423769 | tig0020386:+104627 | None:intergenic |
| GATTCAATGCAGACTTTGAT+GGG | 0.425961 | tig0020386:-107195 | Msa1380690:CDS |
| TCTTGAGTTGGTACGGAAAT+GGG | 0.426083 | tig0020386:+107070 | None:intergenic |
| CTCAATTCGGGAGGAAGAAC+TGG | 0.430438 | tig0020386:+107841 | None:intergenic |
| TCTCGTAAATTGCTTTGAAT+GGG | 0.433790 | tig0020386:+105924 | None:intergenic |
| ATTCTGGTTCTATATTTGTT+CGG | 0.435196 | tig0020386:+107884 | None:intergenic |
| TTATTATGACCGTCCCTCAT+TGG | 0.440271 | tig0020386:+107619 | None:intergenic |
| TCTACCAGGTCCCCATGAAT+AGG | 0.440638 | tig0020386:+105498 | None:intergenic |
| ATGGAAATGGAAAATCCATT+CGG | 0.440917 | tig0020386:-103974 | Msa1380690:CDS |
| CATGGGGACCTGGTAGAATT+GGG | 0.442448 | tig0020386:-105492 | Msa1380690:CDS |
| CATACCATATTTCAATGGAT+TGG | 0.443039 | tig0020386:+106120 | None:intergenic |
| CAATACAGAAGACAGAATTC+AGG | 0.444868 | tig0020386:-104562 | Msa1380690:CDS |
| CAGATTGCGGTACGATTCGC+GGG | 0.446348 | tig0020386:-105761 | Msa1380690:CDS |
| TTTGCATAGATTGGGCATAC+AGG | 0.446557 | tig0020386:-107278 | Msa1380690:CDS |
| TGTAGCATACCATATTTCAA+TGG | 0.450731 | tig0020386:+106115 | None:intergenic |
| CATACTGGTGGAGTATTCAC+AGG | 0.451249 | tig0020386:-105399 | Msa1380690:CDS |
| ACCATTATGGAAGAAGATTC+GGG | 0.451336 | tig0020386:+104394 | None:intergenic |
| TCCATTGAAATACCTATCAA+TGG | 0.461052 | tig0020386:-104628 | Msa1380690:CDS |
| CTGGATCAAGTAAAGACTCT+AGG | 0.462436 | tig0020386:-106299 | Msa1380690:CDS |
| CACTGACAATGAAAATGAAT+GGG | 0.463118 | tig0020386:-107974 | Msa1380690:CDS |
| CTAGAGTCTTTACTTGATCC+AGG | 0.463607 | tig0020386:+106300 | None:intergenic |
| CCACTGACAATGAAAATGAA+TGG | 0.464389 | tig0020386:-107975 | Msa1380690:CDS |
| AGACGTATTCCTACAGGTAA+AGG | 0.465006 | tig0020386:+105551 | None:intergenic |
| TGGAAAGAATTAGGAGAAGA+GGG | 0.467304 | tig0020386:-108000 | Msa1380690:CDS |
| CCTTCTTGAATCGATTGGAA+TGG | 0.469170 | tig0020386:+104682 | None:intergenic |
| ACACAAGGATTCAATTAGTT+CGG | 0.470880 | tig0020386:-103941 | Msa1380690:CDS |
| GTAGCAGACGATATATATAT+CGG | 0.471989 | tig0020386:-105669 | Msa1380690:CDS |
| GAATTCTGTCTTCTGTATTG+AGG | 0.475926 | tig0020386:+104565 | None:intergenic |
| GCGCCTACTTTGCATAGATT+GGG | 0.476543 | tig0020386:-107286 | Msa1380690:CDS |
| TGAAGTATTTCCCATACAAT+CGG | 0.477354 | tig0020386:+107346 | None:intergenic |
| CCTCTTGTCTCCGGCTATTG+GGG | 0.480180 | tig0020386:-107095 | Msa1380690:CDS |
| GGGCGTTCTGTTATTGTCGT+AGG | 0.483193 | tig0020386:-107511 | Msa1380690:CDS |
| AGAGAAATTTCTAGTGGAGC+AGG | 0.488408 | tig0020386:-108087 | Msa1380690:CDS |
| TTAGTCTTGAATTGGGATCA+AGG | 0.488756 | tig0020386:-103912 | Msa1380690:CDS |
| TCTTGCTACGGAGCCCGTAA+AGG | 0.490200 | tig0020386:-105873 | Msa1380690:CDS |
| TGGAGGGAAACTAATGAGTT+CGG | 0.494350 | tig0020386:-107800 | Msa1380690:CDS |
| GGCATATACATCACACATCC+TGG | 0.495134 | tig0020386:-106318 | Msa1380690:CDS |
| TAACAATACCTTCTAAAGGA+TGG | 0.495965 | tig0020386:-106226 | Msa1380690:CDS |
| ACTCAGAAGGCGAAATGCAT+TGG | 0.496258 | tig0020386:-105086 | Msa1380690:CDS |
| CGAAATAGAGAAATTTCTAG+TGG | 0.496839 | tig0020386:-108093 | Msa1380690:CDS |
| TAGCTCTATTGCTATTTCGC+GGG | 0.496998 | tig0020386:+107456 | None:intergenic |
| AATTATTATGGATTCTTCGT+TGG | 0.499116 | tig0020386:-108028 | Msa1380690:CDS |
| GAAGCTGTAGGTATTATTGC+TGG | 0.500714 | tig0020386:-105468 | Msa1380690:CDS |
| TCATACAAACCTCTTGTCTC+CGG | 0.506883 | tig0020386:-107104 | Msa1380690:CDS |
| ATGGGCGGAGTCCTATTCAT+GGG | 0.508984 | tig0020386:-105509 | Msa1380690:CDS |
| GAATGGGAAGATCGAAAAGT+AGG | 0.511851 | tig0020386:-107958 | Msa1380690:CDS |
| GACTCCGCCCATAACACAAT+CGG | 0.512450 | tig0020386:+105520 | None:intergenic |
| CCTCGTAATCGTAAGAAAGT+AGG | 0.512515 | tig0020386:+108192 | None:intergenic |
| CGGAGCCCGTAAAGGGGTTG+TGG | 0.513039 | tig0020386:-105865 | Msa1380690:CDS |
| AAATCAATCATTTGTCCTTG+TGG | 0.513235 | tig0020386:+105948 | None:intergenic |
| ATGGAAAGAATTAGGAGAAG+AGG | 0.513927 | tig0020386:-108001 | Msa1380690:CDS |
| ATAGCTCTATTGCTATTTCG+CGG | 0.516257 | tig0020386:+107455 | None:intergenic |
| TAGATGTAGCAGTAGCTTGA+CGG | 0.516966 | tig0020386:+106273 | None:intergenic |
| TATGGGCGGAGTCCTATTCA+TGG | 0.517790 | tig0020386:-105510 | Msa1380690:CDS |
| GAGTTGCTAAGAGTAAAATA+CGG | 0.520079 | tig0020386:-107378 | Msa1380690:CDS |
| AGATTTCGAGAGACTCTGCT+TGG | 0.523467 | tig0020386:-107553 | Msa1380690:CDS |
| ATGTATATGCCATTCCGAAA+TGG | 0.525535 | tig0020386:+106330 | None:intergenic |
| GGTCAATCTATTGGCGAACC+GGG | 0.527123 | tig0020386:-105447 | Msa1380690:CDS |
| AGACTTTGATGGGGATCAAA+TGG | 0.531054 | tig0020386:-107185 | Msa1380690:CDS |
| ACAGATTGCGGTACGATTCG+CGG | 0.531220 | tig0020386:-105762 | Msa1380690:CDS |
| GTCCGCGGATTCCATTATCA+AGG | 0.532137 | tig0020386:+107644 | None:intergenic |
| CCTATAAGCATATCTTGAGT+TGG | 0.532621 | tig0020386:+107058 | None:intergenic |
| ATTTAATCAAATAATATGTA+CGG | 0.533241 | tig0020386:-104788 | Msa1380690:CDS |
| TTGGATAGGATCCAATAAGA+TGG | 0.534215 | tig0020386:+108247 | None:intergenic |
| GAATATATAATTTCTTGCTA+CGG | 0.534554 | tig0020386:-105885 | Msa1380690:CDS |
| ATCCATGACGTGTACGTGTA+GGG | 0.535056 | tig0020386:+105310 | None:intergenic |
| CAGCTTCTCCCAATTCTACC+AGG | 0.535523 | tig0020386:+105484 | None:intergenic |
| GATATAATTGAGGGCAAAGA+GGG | 0.535939 | tig0020386:-107577 | Msa1380690:CDS |
| TCTATATTACATATAAAAGC+AGG | 0.536951 | tig0020386:+105285 | None:intergenic |
| TGGATCAAGTAAAGACTCTA+GGG | 0.538268 | tig0020386:-106298 | Msa1380690:CDS |
| AATACTTCAAGAAGTTATGC+GGG | 0.538847 | tig0020386:-107332 | Msa1380690:CDS |
| ACTTACTTCAACAAAGGAAG+AGG | 0.540450 | tig0020386:+103861 | None:intergenic |
| AAGCATATCTTGAGTTGGTA+CGG | 0.543078 | tig0020386:+107063 | None:intergenic |
| CCATTCCAATCGATTCAAGA+AGG | 0.543286 | tig0020386:-104682 | Msa1380690:CDS |
| TTCGGGGAATTTCCGACACA+AGG | 0.543374 | tig0020386:-103956 | Msa1380690:CDS |
| GATCCAAGACGTATTCCTAC+AGG | 0.544747 | tig0020386:+105545 | None:intergenic |
| TTACCTGTAGGAATACGTCT+TGG | 0.547868 | tig0020386:-105548 | Msa1380690:CDS |
| CCTTTGAAAATCGGACGTGA+GGG | 0.548394 | tig0020386:+108277 | None:intergenic |
| CATATTTATTCTGACTCAGA+AGG | 0.548655 | tig0020386:-105099 | Msa1380690:CDS |
| TGACACATTACTAATTCCCC+TGG | 0.549045 | tig0020386:+107700 | None:intergenic |
| GAACAAATATAGAACCAGAA+TGG | 0.550621 | tig0020386:-107882 | Msa1380690:CDS |
| CCCTTTGAAAATCGGACGTG+AGG | 0.550708 | tig0020386:+108276 | None:intergenic |
| GTTTGTACTTACTTCAACAA+AGG | 0.560389 | tig0020386:+103855 | None:intergenic |
| AGTTGCTAAGAGTAAAATAC+GGG | 0.563519 | tig0020386:-107377 | Msa1380690:CDS |
| TTACATCCATTAGTGTGTAA+GGG | 0.565613 | tig0020386:-107217 | Msa1380690:CDS |
| CACCCTACACGTACACGTCA+TGG | 0.566616 | tig0020386:-105312 | Msa1380690:CDS |
| AAATATAGAACCAGAATGGA+TGG | 0.566690 | tig0020386:-107878 | Msa1380690:CDS |
| TCTATAGAAGAGTTATCTAT+CGG | 0.571448 | tig0020386:-107765 | Msa1380690:CDS |
| GCTGTACGAACATCAGATGC+TGG | 0.573261 | tig0020386:-105837 | Msa1380690:CDS |
| TACACGTCGACTTGTTGAAG+TGG | 0.573503 | tig0020386:-105808 | Msa1380690:CDS |
| CCGATTATTCAAATAGATGG+AGG | 0.576436 | tig0020386:-107817 | Msa1380690:CDS |
| GAAGATTTCATTGAGTATCG+AGG | 0.578377 | tig0020386:-104493 | Msa1380690:CDS |
| ATGCCCAATCTATGCAAAGT+AGG | 0.578492 | tig0020386:+107283 | None:intergenic |
| CACCAATTAGTCGGAATGAG+AGG | 0.580106 | tig0020386:-105984 | Msa1380690:CDS |
| GAGTCCTATTCATGGGGACC+TGG | 0.582108 | tig0020386:-105502 | Msa1380690:CDS |
| AACTAATTGAATCCTTGTGT+CGG | 0.584495 | tig0020386:+103944 | None:intergenic |
| TCACTTTCATTACATCGATG+TGG | 0.585158 | tig0020386:-107484 | Msa1380690:CDS |
| TCTTATCAGGAAAGTCGTGC+AGG | 0.586356 | tig0020386:-104987 | Msa1380690:CDS |
| ATTAATAGACCATTTCGGAA+TGG | 0.587547 | tig0020386:-106339 | Msa1380690:CDS |
| CCTACTTTCTTACGATTACG+AGG | 0.587628 | tig0020386:-108192 | Msa1380690:CDS |
| GAAATGGGATCCCCAATAGC+CGG | 0.587924 | tig0020386:+107085 | None:intergenic |
| TGTGTCGGAAATTCCCCGAA+TGG | 0.589742 | tig0020386:+103959 | None:intergenic |
| ACGATATATATATCGGTTCA+CGG | 0.590851 | tig0020386:-105662 | Msa1380690:CDS |
| GGCCTTTATGTATTAACTAG+CGG | 0.596927 | tig0020386:-107037 | Msa1380690:CDS |
| AAAATTGGTACAAGAAGCCG+TGG | 0.599616 | tig0020386:-107674 | Msa1380690:CDS |
| TATCCATGACGTGTACGTGT+AGG | 0.600683 | tig0020386:+105309 | None:intergenic |
| AGCTCTATTGCTATTTCGCG+GGG | 0.600779 | tig0020386:+107457 | None:intergenic |
| ATTCAAAGCAATTTACGAGA+AGG | 0.601229 | tig0020386:-105921 | Msa1380690:CDS |
| CTCCTTGATAATGGAATCCG+CGG | 0.604913 | tig0020386:-107646 | Msa1380690:CDS |
| AGATATAATTGAGGGCAAAG+AGG | 0.606620 | tig0020386:-107578 | Msa1380690:CDS |
| CATCGATGTAATGAAAGTGA+TGG | 0.607503 | tig0020386:+107487 | None:intergenic |
| CTTACTTCAACAAAGGAAGA+GGG | 0.610881 | tig0020386:+103862 | None:intergenic |
| TACTTCAACAAAGGAAGAGG+GGG | 0.611335 | tig0020386:+103864 | None:intergenic |
| TCTCAAGTGCACCAATTAGT+CGG | 0.615181 | tig0020386:-105993 | Msa1380690:CDS |
| CCCCAATAGCCGGAGACAAG+AGG | 0.615798 | tig0020386:+107095 | None:intergenic |
| ATTATCAAGGAGTGTATCCA+CGG | 0.619206 | tig0020386:+107657 | None:intergenic |
| AATCCGCGGACAACCAATGA+GGG | 0.620928 | tig0020386:-107632 | Msa1380690:CDS |
| AAATACTTTAGCCGGATGAG+AGG | 0.622971 | tig0020386:-108303 | None:intergenic |
| CGTCCCTCATTGGTTGTCCG+CGG | 0.625858 | tig0020386:+107629 | None:intergenic |
| GTGATTGCTGAGATCCGCGC+GGG | 0.626051 | tig0020386:-105159 | Msa1380690:CDS |
| ACGTATTCCTACAGGTAAAG+GGG | 0.629974 | tig0020386:+105553 | None:intergenic |
| TTGCTACGGAGCCCGTAAAG+GGG | 0.638134 | tig0020386:-105871 | Msa1380690:CDS |
| AAATACTTCAAGAAGTTATG+CGG | 0.639489 | tig0020386:-107333 | Msa1380690:CDS |
| CGATTATTCAAATAGATGGA+GGG | 0.639639 | tig0020386:-107816 | Msa1380690:CDS |
| GTAGAATTGGGAGAAGCTGT+AGG | 0.641313 | tig0020386:-105480 | Msa1380690:CDS |
| ATACTGGTGGAGTATTCACA+GGG | 0.646983 | tig0020386:-105398 | Msa1380690:CDS |
| CGCGGACAACCAATGAGGGA+CGG | 0.650205 | tig0020386:-107628 | Msa1380690:CDS |
| GTTGTACGTCGAACAGATTG+CGG | 0.659130 | tig0020386:-105774 | Msa1380690:CDS |
| ACAACAAGTAGATCTACACC+AGG | 0.661649 | tig0020386:-107718 | Msa1380690:CDS |
| ATTCAATGCAGACTTTGATG+GGG | 0.662689 | tig0020386:-107194 | Msa1380690:CDS |
| GAAAACGAGTTGATTATTCG+GGG | 0.664266 | tig0020386:-107531 | Msa1380690:CDS |
| TGGGCGGAGTCCTATTCATG+GGG | 0.665077 | tig0020386:-105508 | Msa1380690:CDS |
| GAATCCGCGGACAACCAATG+AGG | 0.667535 | tig0020386:-107633 | Msa1380690:CDS |
| TACTTCAAGAAGTTATGCGG+GGG | 0.669171 | tig0020386:-107330 | Msa1380690:CDS |
| ATTTCAATGGAAACACCAGA+AGG | 0.673294 | tig0020386:+104640 | None:intergenic |
| CGTATTCCTACAGGTAAAGG+GGG | 0.679391 | tig0020386:+105554 | None:intergenic |
| TTACTTCAACAAAGGAAGAG+GGG | 0.682642 | tig0020386:+103863 | None:intergenic |
| TTATATGGACTGGATTAAAG+GGG | 0.684921 | tig0020386:+106045 | None:intergenic |
| ATACTTCAAGAAGTTATGCG+GGG | 0.687954 | tig0020386:-107331 | Msa1380690:CDS |
| TCAGTATGGGAATGTACATG+CGG | 0.691247 | tig0020386:-106156 | Msa1380690:CDS |
| GGAAATGGAAAATCCATTCG+GGG | 0.695544 | tig0020386:-103972 | Msa1380690:CDS |
| TTCGGATGCATGGTACACAT+CGG | 0.696241 | tig0020386:+105059 | None:intergenic |
| CAACAAGTAGATCTACACCA+GGG | 0.701288 | tig0020386:-107717 | Msa1380690:CDS |
| AACAAGTAGATCTACACCAG+GGG | 0.706918 | tig0020386:-107716 | Msa1380690:CDS |
| GGATTAATGTCAGATCCACA+AGG | 0.711466 | tig0020386:-105963 | Msa1380690:CDS |
| ATAATCGGTCTCAATTCGGG+AGG | 0.712530 | tig0020386:+107832 | None:intergenic |
| TTAACTAGCGGAAATCGTCG+AGG | 0.734048 | tig0020386:-107025 | Msa1380690:intron |
| TCTGCCGATTGTGTTATGGG+CGG | 0.746299 | tig0020386:-105524 | Msa1380690:CDS |
| TAAAAGTATATGTTCCCGCG+CGG | 0.748407 | tig0020386:+105145 | None:intergenic |
| ACTGGTGGAGTATTCACAGG+GGG | 0.750203 | tig0020386:-105396 | Msa1380690:CDS |
| AGTGATTGCTGAGATCCGCG+CGG | 0.769084 | tig0020386:-105160 | Msa1380690:CDS |
| TACTGGTGGAGTATTCACAG+GGG | 0.793942 | tig0020386:-105397 | Msa1380690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATCAAATAATATGTA+CGG | - | tig0020386:107363-107382 | Msa1380690:CDS | 10.0% |
| !!! | TTTTTTTTTTCTTTTCTAAT+CGG | + | tig0020386:107855-107874 | None:intergenic | 10.0% |
| !! | AATCAAAAAAAATTCATAAT+TGG | - | tig0020386:107988-108007 | Msa1380690:CDS | 10.0% |
| !!! | ATTTTGATACAAACATTAAT+TGG | - | tig0020386:106452-106471 | Msa1380690:intron | 15.0% |
| !!! | ATACTTTTAATTTGAAAGAA+AGG | - | tig0020386:107020-107039 | Msa1380690:intron | 15.0% |
| !!! | TACTTTTAATTTGAAAGAAA+GGG | - | tig0020386:107021-107040 | Msa1380690:intron | 15.0% |
| !! | TACATTACTATACAAAAATT+CGG | + | tig0020386:107113-107132 | None:intergenic | 15.0% |
| !! | ATTACTAAATATAGAACTAT+AGG | - | tig0020386:107613-107632 | Msa1380690:CDS | 15.0% |
| !!! | ATCGAATTAAAAATATTTTC+TGG | - | tig0020386:107877-107896 | Msa1380690:CDS | 15.0% |
| !!! | TGTAATTTTATATGAAATAC+CGG | - | tig0020386:108067-108086 | Msa1380690:CDS | 15.0% |
| !! | AATTATATTCTTTATGGAAA+TGG | - | tig0020386:108164-108183 | Msa1380690:CDS | 15.0% |
| !! | TCTGGATTTAAGAATTATTA+TGG | - | tig0020386:104111-104130 | Msa1380690:intron | 20.0% |
| !! | TTAGAATTTCTGCAATTAAA+CGG | + | tig0020386:105174-105193 | None:intergenic | 20.0% |
| !! | GTACCTATTATGAAATTTAT+GGG | - | tig0020386:105391-105410 | Msa1380690:CDS | 20.0% |
| !! | GTAAATTTATGTTATGATAC+TGG | - | tig0020386:105585-105604 | Msa1380690:CDS | 20.0% |
| !!! | AAGAAATGAATCCTAATTTT+AGG | - | tig0020386:106075-106094 | Msa1380690:CDS | 20.0% |
| !! | GAATATATAATTTCTTGCTA+CGG | - | tig0020386:106266-106285 | Msa1380690:CDS | 20.0% |
| !!! | AATTTTATTTTTCCATTCGA+GGG | + | tig0020386:106803-106822 | None:intergenic | 20.0% |
| !!! | AAATTTTATTTTTCCATTCG+AGG | + | tig0020386:106804-106823 | None:intergenic | 20.0% |
| !! | TCTATATTACATATAAAAGC+AGG | + | tig0020386:106869-106888 | None:intergenic | 20.0% |
| !!! | TGAACTAATAGAAAACTTTT+TGG | + | tig0020386:106944-106963 | None:intergenic | 20.0% |
| !!! | TTATTAAGTTTGAAGACTTT+TGG | - | tig0020386:107307-107326 | Msa1380690:CDS | 20.0% |
| !!! | TCACGATACTTTTTATTTAT+TGG | - | tig0020386:107417-107436 | Msa1380690:CDS | 20.0% |
| !!! | GAAATCTTCTTTTTGAAAAA+CGG | + | tig0020386:107647-107666 | None:intergenic | 20.0% |
| !!! | CAAAACAAAATACTTTTTCT+TGG | + | tig0020386:108039-108058 | None:intergenic | 20.0% |
| !!! | CAAGAAAAAGTATTTTGTTT+TGG | - | tig0020386:108037-108056 | Msa1380690:CDS | 20.0% |
| !!! | AAAAGTATTTTGTTTTGGTT+CGG | - | tig0020386:108042-108061 | Msa1380690:CDS | 20.0% |
| !! | GGTATTTCATATAAAATTAC+AGG | + | tig0020386:108068-108087 | None:intergenic | 20.0% |
| !! | GTTGTCAATTATATTCTTTA+TGG | - | tig0020386:108158-108177 | Msa1380690:CDS | 20.0% |
| !!! | AAAGTAGGTTTTTTAACTAC+GGG | + | tig0020386:103947-103966 | None:intergenic | 25.0% |
| !!! | GAAAGTAGGTTTTTTAACTA+CGG | + | tig0020386:103948-103967 | None:intergenic | 25.0% |
| ! | AATTATTATGGATTCTTCGT+TGG | - | tig0020386:104123-104142 | Msa1380690:intron | 25.0% |
| !!! | AGGAAGAAGAAAGAATTTTT+TGG | - | tig0020386:104213-104232 | Msa1380690:intron | 25.0% |
| !!! | ATTCTGGTTCTATATTTGTT+CGG | + | tig0020386:104270-104289 | None:intergenic | 25.0% |
| ! | TCTATAGAAGAGTTATCTAT+CGG | - | tig0020386:104386-104405 | Msa1380690:intron | 25.0% |
| !!! | TAGATCTACTTGTTGTTAAT+AGG | + | tig0020386:104429-104448 | None:intergenic | 25.0% |
| ! | AGTAATGTGTCAAGAAAAAT+TGG | - | tig0020386:104462-104481 | Msa1380690:CDS | 25.0% |
| !! | ATCGTTTTCAGATATAATTG+AGG | - | tig0020386:104564-104583 | Msa1380690:CDS | 25.0% |
| !! | TCGTTTTCAGATATAATTGA+GGG | - | tig0020386:104565-104584 | Msa1380690:CDS | 25.0% |
| ! | AAATACTTCAAGAAGTTATG+CGG | - | tig0020386:104818-104837 | Msa1380690:CDS | 25.0% |
| !!! | TTTCAACCTATTTTAGTAGA+AGG | - | tig0020386:104898-104917 | Msa1380690:CDS | 25.0% |
| ! | TCATAGGAATTGCAAAAAAA+GGG | + | tig0020386:105246-105265 | None:intergenic | 25.0% |
| ! | ATCATAGGAATTGCAAAAAA+AGG | + | tig0020386:105247-105266 | None:intergenic | 25.0% |
| !! | TAAATTTCGATAGTCCTTTT+TGG | - | tig0020386:105295-105314 | Msa1380690:CDS | 25.0% |
| ! | GGTACCTATTATGAAATTTA+TGG | - | tig0020386:105390-105409 | Msa1380690:CDS | 25.0% |
| ! | ATGCCCATAAATTTCATAAT+AGG | + | tig0020386:105397-105416 | None:intergenic | 25.0% |
| ! | TGATTAGATACCATATGAAT+AGG | + | tig0020386:105535-105554 | None:intergenic | 25.0% |
| ! | ATGGTATCTAATCATATAGA+TGG | - | tig0020386:105541-105560 | Msa1380690:CDS | 25.0% |
| ! | ATAACATAAATTTACCTAGC+TGG | + | tig0020386:105580-105599 | None:intergenic | 25.0% |
| ! | CGTGAATAAACATAAAGAAA+AGG | - | tig0020386:105646-105665 | Msa1380690:CDS | 25.0% |
| ! | AATGAATTTGAGTCAATGAT+TGG | + | tig0020386:105679-105698 | None:intergenic | 25.0% |
| !! | CTTTTAACAATACCTTCTAA+AGG | - | tig0020386:105921-105940 | Msa1380690:CDS | 25.0% |
| !! | TGAACAACAAAGTTCTATTT+TGG | - | tig0020386:105962-105981 | Msa1380690:CDS | 25.0% |
| ! | TTGGAAAAACATAATCAGTA+TGG | - | tig0020386:105981-106000 | Msa1380690:CDS | 25.0% |
| ! | TGGAAAAACATAATCAGTAT+GGG | - | tig0020386:105982-106001 | Msa1380690:CDS | 25.0% |
| !!! | ATTATATGGACTGGATTAAA+GGG | + | tig0020386:106110-106129 | None:intergenic | 25.0% |
| ! | GTTTGTATCAAAATTCTTTC+TGG | + | tig0020386:106446-106465 | None:intergenic | 25.0% |
| ! | AGAAATCAAGATATTGGAAT+TGG | - | tig0020386:106524-106543 | Msa1380690:intron | 25.0% |
| !! | ACATTAAGAACTTTTCATAC+TGG | - | tig0020386:106737-106756 | Msa1380690:intron | 25.0% |
| !!! | ATTTTATTTTTCCATTCGAG+GGG | + | tig0020386:106802-106821 | None:intergenic | 25.0% |
| !! | ACTAATAGAAAACTTTTTGG+TGG | + | tig0020386:106941-106960 | None:intergenic | 25.0% |
| ! | TACCAAAAACAAGTCATTTA+TGG | - | tig0020386:107140-107159 | Msa1380690:CDS | 25.0% |
| !!! | ATCCATAAATGACTTGTTTT+TGG | + | tig0020386:107145-107164 | None:intergenic | 25.0% |
| !! | ACTTTTGGTACAAAAGAAAA+GGG | - | tig0020386:107322-107341 | Msa1380690:CDS | 25.0% |
| !!! | AAATCTATTTCTTCGTCTTT+TGG | + | tig0020386:107443-107462 | None:intergenic | 25.0% |
| ! | CTATGAAAAATACCATTGAT+AGG | + | tig0020386:107538-107557 | None:intergenic | 25.0% |
| !!! | TCTACTTTGATTTGGTATTT+TGG | + | tig0020386:107700-107719 | None:intergenic | 25.0% |
| ! | AAAATCGATCTACTTTGATT+TGG | + | tig0020386:107708-107727 | None:intergenic | 25.0% |
| ! | CTTCTTATATTGAAAGTGAT+TGG | + | tig0020386:107814-107833 | None:intergenic | 25.0% |
| AGCAAACGAAAAATTTGGAT+AGG | + | tig0020386:103921-103940 | None:intergenic | 30.0% | |
| ! | ATCCAAATTTTTCGTTTGCT+AGG | - | tig0020386:103921-103940 | Msa1380690:CDS | 30.0% |
| TCGAATATGAAATCCAATCT+TGG | - | tig0020386:103987-104006 | Msa1380690:CDS | 30.0% | |
| ! | CGAAATAGAGAAATTTCTAG+TGG | - | tig0020386:104058-104077 | Msa1380690:intron | 30.0% |
| TTGGTAGAATGGAAAGAATT+AGG | - | tig0020386:104142-104161 | Msa1380690:intron | 30.0% | |
| CACTGACAATGAAAATGAAT+GGG | - | tig0020386:104177-104196 | Msa1380690:intron | 30.0% | |
| GAACAAATATAGAACCAGAA+TGG | - | tig0020386:104269-104288 | Msa1380690:intron | 30.0% | |
| AAATATAGAACCAGAATGGA+TGG | - | tig0020386:104273-104292 | Msa1380690:intron | 30.0% | |
| TTGAATAATCGGTCTCAATT+CGG | + | tig0020386:104326-104345 | None:intergenic | 30.0% | |
| AGACCGATTATTCAAATAGA+TGG | - | tig0020386:104331-104350 | Msa1380690:intron | 30.0% | |
| CCTCCATCTATTTGAATAAT+CGG | + | tig0020386:104337-104356 | None:intergenic | 30.0% | |
| CGATTATTCAAATAGATGGA+GGG | - | tig0020386:104335-104354 | Msa1380690:intron | 30.0% | |
| !! | TGGAAAACGAGTTGATTATT+CGG | - | tig0020386:104618-104637 | Msa1380690:CDS | 30.0% |
| TTTCAGACATTTCTAATTCG+TGG | - | tig0020386:104718-104737 | Msa1380690:CDS | 30.0% | |
| ! | AAACATTTTGCTTCGAACAT+AGG | - | tig0020386:104751-104770 | Msa1380690:CDS | 30.0% |
| GAGTTGCTAAGAGTAAAATA+CGG | - | tig0020386:104773-104792 | Msa1380690:CDS | 30.0% | |
| AGTTGCTAAGAGTAAAATAC+GGG | - | tig0020386:104774-104793 | Msa1380690:CDS | 30.0% | |
| ! | TGAAGTATTTCCCATACAAT+CGG | + | tig0020386:104808-104827 | None:intergenic | 30.0% |
| AATACTTCAAGAAGTTATGC+GGG | - | tig0020386:104819-104838 | Msa1380690:CDS | 30.0% | |
| TTTACATCCATTAGTGTGTA+AGG | - | tig0020386:104933-104952 | Msa1380690:CDS | 30.0% | |
| TTACATCCATTAGTGTGTAA+GGG | - | tig0020386:104934-104953 | Msa1380690:CDS | 30.0% | |
| TTCCGCTAGTTAATACATAA+AGG | + | tig0020386:105119-105138 | None:intergenic | 30.0% | |
| ! | GAAGTTCACTATGAATCTTT+TGG | - | tig0020386:105369-105388 | Msa1380690:CDS | 30.0% |
| ATATACATTAGAACCACTGT+TGG | - | tig0020386:105456-105475 | Msa1380690:CDS | 30.0% | |
| AAAAGAAATATGACCAACAG+TGG | + | tig0020386:105472-105491 | None:intergenic | 30.0% | |
| GAAATTGAAGAAGCTATACA+AGG | - | tig0020386:105498-105517 | Msa1380690:CDS | 30.0% | |
| GTTATTGTGAAAGACTAGAT+TGG | + | tig0020386:105754-105773 | None:intergenic | 30.0% | |
| TCTGCTAATAAGTCGTTTAA+TGG | + | tig0020386:105793-105812 | None:intergenic | 30.0% | |
| AGCAGATTAATAGACCATTT+CGG | - | tig0020386:105807-105826 | Msa1380690:CDS | 30.0% | |
| ATTAATAGACCATTTCGGAA+TGG | - | tig0020386:105812-105831 | Msa1380690:CDS | 30.0% | |
| ACTGCTACATCTATTTCATT+AGG | - | tig0020386:105888-105907 | Msa1380690:CDS | 30.0% | |
| ! | TAACAATACCTTCTAAAGGA+TGG | - | tig0020386:105925-105944 | Msa1380690:CDS | 30.0% |
| CATACCATATTTCAATGGAT+TGG | + | tig0020386:106034-106053 | None:intergenic | 30.0% | |
| TGTAGCATACCATATTTCAA+TGG | + | tig0020386:106039-106058 | None:intergenic | 30.0% | |
| !! | TTATATGGACTGGATTAAAG+GGG | + | tig0020386:106109-106128 | None:intergenic | 30.0% |
| !! | CATTATATGGACTGGATTAA+AGG | + | tig0020386:106111-106130 | None:intergenic | 30.0% |
| GAAAAAGACATTATATGGAC+TGG | + | tig0020386:106119-106138 | None:intergenic | 30.0% | |
| ! | GTCCATATAATGTCTTTTTC+AGG | - | tig0020386:106119-106138 | Msa1380690:CDS | 30.0% |
| CTCCTGAAAAAGACATTATA+TGG | + | tig0020386:106124-106143 | None:intergenic | 30.0% | |
| AAATCAATCATTTGTCCTTG+TGG | + | tig0020386:106206-106225 | None:intergenic | 30.0% | |
| ! | TCTCGTAAATTGCTTTGAAT+GGG | + | tig0020386:106230-106249 | None:intergenic | 30.0% |
| ! | TTCTCGTAAATTGCTTTGAA+TGG | + | tig0020386:106231-106250 | None:intergenic | 30.0% |
| ATTCAAAGCAATTTACGAGA+AGG | - | tig0020386:106230-106249 | Msa1380690:CDS | 30.0% | |
| ATTTCTGTAAATACCCGAAA+TGG | - | tig0020386:106413-106432 | Msa1380690:intron | 30.0% | |
| ! | TTTCTGGTATCATTCCATTT+CGG | + | tig0020386:106430-106449 | None:intergenic | 30.0% |
| GTAGCAGACGATATATATAT+CGG | - | tig0020386:106482-106501 | Msa1380690:intron | 30.0% | |
| !! | ACGATATATATATCGGTTCA+CGG | - | tig0020386:106489-106508 | Msa1380690:intron | 30.0% |
| GTCGTTAGAAATCAAGATAT+TGG | - | tig0020386:106518-106537 | Msa1380690:intron | 30.0% | |
| ATTATTGCTGGTCAATCTAT+TGG | - | tig0020386:106695-106714 | Msa1380690:intron | 30.0% | |
| ! | TTAAGAACTTTTCATACTGG+TGG | - | tig0020386:106740-106759 | Msa1380690:intron | 30.0% |
| !!! | TTTTATTTTTCCATTCGAGG+GGG | + | tig0020386:106801-106820 | None:intergenic | 30.0% |
| CATATTTATTCTGACTCAGA+AGG | - | tig0020386:107052-107071 | Msa1380690:CDS | 30.0% | |
| TATACAAAAATTCGGATGCA+TGG | + | tig0020386:107105-107124 | None:intergenic | 30.0% | |
| AGTCATTTATGGATCTTATC+AGG | - | tig0020386:107151-107170 | Msa1380690:CDS | 30.0% | |
| !!! | AATCCATTTTTTACTTCGCA+AGG | - | tig0020386:107195-107214 | Msa1380690:CDS | 30.0% |
| !! | AACATTGATTCTCTTTCTAC+TGG | - | tig0020386:107232-107251 | Msa1380690:CDS | 30.0% |
| ! | GACTTTTGGTACAAAAGAAA+AGG | - | tig0020386:107321-107340 | Msa1380690:CDS | 30.0% |
| ! | CTTTTGGTACAAAAGAAAAG+GGG | - | tig0020386:107323-107342 | Msa1380690:CDS | 30.0% |
| TACGGATCATTCTCATTTAA+TGG | - | tig0020386:107381-107400 | Msa1380690:CDS | 30.0% | |
| !! | AAAGTATCGTGAAAAATAGC+AGG | + | tig0020386:107409-107428 | None:intergenic | 30.0% |
| TCCATTGAAATACCTATCAA+TGG | - | tig0020386:107523-107542 | Msa1380690:CDS | 30.0% | |
| ACCATTGATAGGTATTTCAA+TGG | + | tig0020386:107527-107546 | None:intergenic | 30.0% | |
| TACCATTATGGAAGAAGATT+CGG | + | tig0020386:107761-107780 | None:intergenic | 30.0% | |
| AATCTTCTTCCATAATGGTA+CGG | - | tig0020386:107761-107780 | Msa1380690:CDS | 30.0% | |
| ACTATTATTCCGTACCATTA+TGG | + | tig0020386:107773-107792 | None:intergenic | 30.0% | |
| AATAATAGTCTCGTTGGAAT+AGG | - | tig0020386:107784-107803 | Msa1380690:CDS | 30.0% | |
| TTCAATATAAGAAGTCGAGT+AGG | - | tig0020386:107820-107839 | Msa1380690:CDS | 30.0% | |
| !!! | TCCATTTTTTTTTACCGTTC+CGG | + | tig0020386:107965-107984 | None:intergenic | 30.0% |
| GAACGGTAAAAAAAAATGGA+AGG | - | tig0020386:107965-107984 | Msa1380690:CDS | 30.0% | |
| ATAATTGGATCTATGTCCAA+TGG | - | tig0020386:108003-108022 | Msa1380690:CDS | 30.0% | |
| TTTACAAAATCGATACTGTC+CGG | + | tig0020386:108089-108108 | None:intergenic | 30.0% | |
| ATGGAAATGGAAAATCCATT+CGG | - | tig0020386:108177-108196 | Msa1380690:CDS | 30.0% | |
| AACTAATTGAATCCTTGTGT+CGG | + | tig0020386:108210-108229 | None:intergenic | 30.0% | |
| ACACAAGGATTCAATTAGTT+CGG | - | tig0020386:108210-108229 | Msa1380690:CDS | 30.0% | |
| !! | GACTTGTTTAGTCTTGAATT+GGG | - | tig0020386:108232-108251 | Msa1380690:CDS | 30.0% |
| !! | GCAAAAAAGTACTTCTATTG+AGG | - | tig0020386:108261-108280 | Msa1380690:CDS | 30.0% |
| !! | AAAAAGTACTTCTATTGAGG+AGG | - | tig0020386:108264-108283 | Msa1380690:CDS | 30.0% |
| TTGGATAGGATCCAATAAGA+TGG | + | tig0020386:103907-103926 | None:intergenic | 35.0% | |
| GGATACTGTATTTCCAAGAT+TGG | + | tig0020386:104003-104022 | None:intergenic | 35.0% | |
| CTTGAGTAGCAAAAAAGAGT+GGG | + | tig0020386:104024-104043 | None:intergenic | 35.0% | |
| ACGAGAACAATTAGTTGATC+TGG | - | tig0020386:104093-104112 | Msa1380690:intron | 35.0% | |
| ATGGAAAGAATTAGGAGAAG+AGG | - | tig0020386:104150-104169 | Msa1380690:intron | 35.0% | |
| TGGAAAGAATTAGGAGAAGA+GGG | - | tig0020386:104151-104170 | Msa1380690:intron | 35.0% | |
| ! | CCATTCATTTTCATTGTCAG+TGG | + | tig0020386:104179-104198 | None:intergenic | 35.0% |
| CCACTGACAATGAAAATGAA+TGG | - | tig0020386:104176-104195 | Msa1380690:intron | 35.0% | |
| AGACATAAAACCATCCATTC+TGG | + | tig0020386:104286-104305 | None:intergenic | 35.0% | |
| TGAATAATCGGTCTCAATTC+GGG | + | tig0020386:104325-104344 | None:intergenic | 35.0% | |
| CCGATTATTCAAATAGATGG+AGG | - | tig0020386:104334-104353 | Msa1380690:intron | 35.0% | |
| ! | ATTATCAAGGAGTGTATCCA+CGG | + | tig0020386:104497-104516 | None:intergenic | 35.0% |
| AGATATAATTGAGGGCAAAG+AGG | - | tig0020386:104573-104592 | Msa1380690:CDS | 35.0% | |
| GATATAATTGAGGGCAAAGA+GGG | - | tig0020386:104574-104593 | Msa1380690:CDS | 35.0% | |
| !! | GGAAAACGAGTTGATTATTC+GGG | - | tig0020386:104619-104638 | Msa1380690:CDS | 35.0% |
| !! | GAAAACGAGTTGATTATTCG+GGG | - | tig0020386:104620-104639 | Msa1380690:CDS | 35.0% |
| CATCGATGTAATGAAAGTGA+TGG | + | tig0020386:104667-104686 | None:intergenic | 35.0% | |
| TCACTTTCATTACATCGATG+TGG | - | tig0020386:104667-104686 | Msa1380690:CDS | 35.0% | |
| !! | ATAGCTCTATTGCTATTTCG+CGG | + | tig0020386:104699-104718 | None:intergenic | 35.0% |
| GGAAAAAGAACCGATTGTAT+GGG | - | tig0020386:104795-104814 | Msa1380690:CDS | 35.0% | |
| ATACTTCAAGAAGTTATGCG+GGG | - | tig0020386:104820-104839 | Msa1380690:CDS | 35.0% | |
| TTGAATCCCTTACACACTAA+TGG | + | tig0020386:104943-104962 | None:intergenic | 35.0% | |
| GATTCAATGCAGACTTTGAT+GGG | - | tig0020386:104956-104975 | Msa1380690:CDS | 35.0% | |
| ATTCAATGCAGACTTTGATG+GGG | - | tig0020386:104957-104976 | Msa1380690:CDS | 35.0% | |
| TGTTCATGTGCCTTTATCTT+TGG | - | tig0020386:104990-105009 | Msa1380690:CDS | 35.0% | |
| !! | AAGCATATCTTGAGTTGGTA+CGG | + | tig0020386:105091-105110 | None:intergenic | 35.0% |
| CCTATAAGCATATCTTGAGT+TGG | + | tig0020386:105096-105115 | None:intergenic | 35.0% | |
| CCAACTCAAGATATGCTTAT+AGG | - | tig0020386:105093-105112 | Msa1380690:CDS | 35.0% | |
| GGCCTTTATGTATTAACTAG+CGG | - | tig0020386:105114-105133 | Msa1380690:CDS | 35.0% | |
| TGCAATTCCTATGATGCAAT+TGG | - | tig0020386:105252-105271 | Msa1380690:CDS | 35.0% | |
| ATAAGCTCCAATTGCATCAT+AGG | + | tig0020386:105262-105281 | None:intergenic | 35.0% | |
| GATTCATAGTGAACTTCGAT+AGG | + | tig0020386:105366-105385 | None:intergenic | 35.0% | |
| ! | TTTTCTCGAGCCTATTCATA+TGG | - | tig0020386:105522-105541 | Msa1380690:CDS | 35.0% |
| TATGATACTGGCGTAAATTC+AGG | - | tig0020386:105597-105616 | Msa1380690:CDS | 35.0% | |
| GTCTTTCACAATAACGTGAT+AGG | - | tig0020386:105759-105778 | Msa1380690:CDS | 35.0% | |
| TTTCACAATAACGTGATAGG+TGG | - | tig0020386:105762-105781 | Msa1380690:CDS | 35.0% | |
| ATGTATATGCCATTCCGAAA+TGG | + | tig0020386:105824-105843 | None:intergenic | 35.0% | |
| TGGATCAAGTAAAGACTCTA+GGG | - | tig0020386:105853-105872 | Msa1380690:CDS | 35.0% | |
| !! | AACTTTGTTGTTCAGCATCT+TGG | + | tig0020386:105956-105975 | None:intergenic | 35.0% |
| TACGCCAATCCATTGAAATA+TGG | - | tig0020386:106027-106046 | Msa1380690:CDS | 35.0% | |
| TTCTGGTATCATTCCATTTC+GGG | + | tig0020386:106429-106448 | None:intergenic | 35.0% | |
| AAGGGGGTTCGAATAAATAT+TGG | + | tig0020386:106584-106603 | None:intergenic | 35.0% | |
| CTTAATGTTAGTTGAGTTCC+CGG | + | tig0020386:106725-106744 | None:intergenic | 35.0% | |
| GATCCTTGCGAAGTAAAAAA+TGG | + | tig0020386:107201-107220 | None:intergenic | 35.0% | |
| TCTTTCCTTCTTGAATCGAT+TGG | + | tig0020386:107477-107496 | None:intergenic | 35.0% | |
| ATTTCAATGGAAACACCAGA+AGG | + | tig0020386:107514-107533 | None:intergenic | 35.0% | |
| GAATTCTGTCTTCTGTATTG+AGG | + | tig0020386:107589-107608 | None:intergenic | 35.0% | |
| CAATACAGAAGACAGAATTC+AGG | - | tig0020386:107589-107608 | Msa1380690:CDS | 35.0% | |
| ! | GAAGATTTCATTGAGTATCG+AGG | - | tig0020386:107658-107677 | Msa1380690:CDS | 35.0% |
| GGTAAAATATGCACTTCTTC+GGG | + | tig0020386:107739-107758 | None:intergenic | 35.0% | |
| GGGTAAAATATGCACTTCTT+CGG | + | tig0020386:107740-107759 | None:intergenic | 35.0% | |
| ACCATTATGGAAGAAGATTC+GGG | + | tig0020386:107760-107779 | None:intergenic | 35.0% | |
| AATATAAGAAGTCGAGTAGG+CGG | - | tig0020386:107823-107842 | Msa1380690:CDS | 35.0% | |
| ! | TCTGGAAATATCCATTTTCC+CGG | - | tig0020386:107895-107914 | Msa1380690:CDS | 35.0% |
| TATCAAGATAGAACTGTGTC+GGG | + | tig0020386:107938-107957 | None:intergenic | 35.0% | |
| GTATCAAGATAGAACTGTGT+CGG | + | tig0020386:107939-107958 | None:intergenic | 35.0% | |
| !!! | CCATTTTTTTTTACCGTTCC+GGG | + | tig0020386:107964-107983 | None:intergenic | 35.0% |
| TCTTTCCTGGAATAGATCTT+GGG | + | tig0020386:108120-108139 | None:intergenic | 35.0% | |
| ATTCCAGGAAAGAGATAATC+TGG | - | tig0020386:108127-108146 | Msa1380690:CDS | 35.0% | |
| TGGAAATGGAAAATCCATTC+GGG | - | tig0020386:108178-108197 | Msa1380690:CDS | 35.0% | |
| !! | GGACTTGTTTAGTCTTGAAT+TGG | - | tig0020386:108231-108250 | Msa1380690:CDS | 35.0% |
| !! | TTAGTCTTGAATTGGGATCA+AGG | - | tig0020386:108239-108258 | Msa1380690:CDS | 35.0% |
| TTACTTCAACAAAGGAAGAG+GGG | + | tig0020386:108291-108310 | None:intergenic | 35.0% | |
| GGCCTAGCAAACGAAAAATT+TGG | + | tig0020386:103926-103945 | None:intergenic | 40.0% | |
| CCTCGTAATCGTAAGAAAGT+AGG | + | tig0020386:103962-103981 | None:intergenic | 40.0% | |
| CCTACTTTCTTACGATTACG+AGG | - | tig0020386:103959-103978 | Msa1380690:CDS | 40.0% | |
| CCTTGAGTAGCAAAAAAGAG+TGG | + | tig0020386:104025-104044 | None:intergenic | 40.0% | |
| !!! | CCACTCTTTTTTGCTACTCA+AGG | - | tig0020386:104022-104041 | Msa1380690:intron | 40.0% |
| !! | AGAGAAATTTCTAGTGGAGC+AGG | - | tig0020386:104064-104083 | Msa1380690:intron | 40.0% |
| ! | TGGATTCTTCGTTGGTAGAA+TGG | - | tig0020386:104131-104150 | Msa1380690:intron | 40.0% |
| GAATGGGAAGATCGAAAAGT+AGG | - | tig0020386:104193-104212 | Msa1380690:intron | 40.0% | |
| !!! | GAATTTTTTGGTTCGACGCA+TGG | - | tig0020386:104225-104244 | Msa1380690:intron | 40.0% |
| TGGAGGGAAACTAATGAGTT+CGG | - | tig0020386:104351-104370 | Msa1380690:intron | 40.0% | |
| ACAACAAGTAGATCTACACC+AGG | - | tig0020386:104433-104452 | Msa1380690:CDS | 40.0% | |
| CAACAAGTAGATCTACACCA+GGG | - | tig0020386:104434-104453 | Msa1380690:CDS | 40.0% | |
| AACAAGTAGATCTACACCAG+GGG | - | tig0020386:104435-104454 | Msa1380690:CDS | 40.0% | |
| TGACACATTACTAATTCCCC+TGG | + | tig0020386:104454-104473 | None:intergenic | 40.0% | |
| AAAATTGGTACAAGAAGCCG+TGG | - | tig0020386:104477-104496 | Msa1380690:CDS | 40.0% | |
| GTGGATACACTCCTTGATAA+TGG | - | tig0020386:104496-104515 | Msa1380690:CDS | 40.0% | |
| TTATTATGACCGTCCCTCAT+TGG | + | tig0020386:104535-104554 | None:intergenic | 40.0% | |
| !! | TAGCTCTATTGCTATTTCGC+GGG | + | tig0020386:104698-104717 | None:intergenic | 40.0% |
| GGGAAAAAGAACCGATTGTA+TGG | - | tig0020386:104794-104813 | Msa1380690:CDS | 40.0% | |
| TACTTCAAGAAGTTATGCGG+GGG | - | tig0020386:104821-104840 | Msa1380690:CDS | 40.0% | |
| ATGCCCAATCTATGCAAAGT+AGG | + | tig0020386:104871-104890 | None:intergenic | 40.0% | |
| TTTGCATAGATTGGGCATAC+AGG | - | tig0020386:104873-104892 | Msa1380690:CDS | 40.0% | |
| GCACGTCCTTCTACTAAAAT+AGG | + | tig0020386:104907-104926 | None:intergenic | 40.0% | |
| GGATTCAATGCAGACTTTGA+TGG | - | tig0020386:104955-104974 | Msa1380690:CDS | 40.0% | |
| AGACTTTGATGGGGATCAAA+TGG | - | tig0020386:104966-104985 | Msa1380690:CDS | 40.0% | |
| TCATGTGCCTTTATCTTTGG+AGG | - | tig0020386:104993-105012 | Msa1380690:CDS | 40.0% | |
| TCATACAAACCTCTTGTCTC+CGG | - | tig0020386:105047-105066 | Msa1380690:CDS | 40.0% | |
| !! | TCTTGAGTTGGTACGGAAAT+GGG | + | tig0020386:105084-105103 | None:intergenic | 40.0% |
| !! | ATCTTGAGTTGGTACGGAAA+TGG | + | tig0020386:105085-105104 | None:intergenic | 40.0% |
| !! | GTTAGTGTTGATATCCAGCT+AGG | - | tig0020386:105563-105582 | Msa1380690:CDS | 40.0% |
| ATATTCCACTCAGTGGGATT+CGG | + | tig0020386:105708-105727 | None:intergenic | 40.0% | |
| !! | GTGGAATATGGAGGTACTTA+TGG | - | tig0020386:105719-105738 | Msa1380690:CDS | 40.0% |
| CTAGAGTCTTTACTTGATCC+AGG | + | tig0020386:105854-105873 | None:intergenic | 40.0% | |
| CTGGATCAAGTAAAGACTCT+AGG | - | tig0020386:105852-105871 | Msa1380690:CDS | 40.0% | |
| TAGATGTAGCAGTAGCTTGA+CGG | + | tig0020386:105881-105900 | None:intergenic | 40.0% | |
| TCAGTATGGGAATGTACATG+CGG | - | tig0020386:105995-106014 | Msa1380690:CDS | 40.0% | |
| GGGTCAGTCATCCTAAAATT+AGG | + | tig0020386:106089-106108 | None:intergenic | 40.0% | |
| !!! | ATGTCTTTTTCAGGAGCTAG+AGG | - | tig0020386:106128-106147 | Msa1380690:CDS | 40.0% |
| TCTCAAGTGCACCAATTAGT+CGG | - | tig0020386:106158-106177 | Msa1380690:CDS | 40.0% | |
| ATCCTCTCATTCCGACTAAT+TGG | + | tig0020386:106172-106191 | None:intergenic | 40.0% | |
| GGATTAATGTCAGATCCACA+AGG | - | tig0020386:106188-106207 | Msa1380690:CDS | 40.0% | |
| ACGTATTCCTACAGGTAAAG+GGG | + | tig0020386:106601-106620 | None:intergenic | 40.0% | |
| GACGTATTCCTACAGGTAAA+GGG | + | tig0020386:106602-106621 | None:intergenic | 40.0% | |
| AGACGTATTCCTACAGGTAA+AGG | + | tig0020386:106603-106622 | None:intergenic | 40.0% | |
| TTACCTGTAGGAATACGTCT+TGG | - | tig0020386:106603-106622 | Msa1380690:intron | 40.0% | |
| GAAGCTGTAGGTATTATTGC+TGG | - | tig0020386:106683-106702 | Msa1380690:intron | 40.0% | |
| ! | ATACTGGTGGAGTATTCACA+GGG | - | tig0020386:106753-106772 | Msa1380690:intron | 40.0% |
| ! | TAAAAGTATATGTTCCCGCG+CGG | + | tig0020386:107009-107028 | None:intergenic | 40.0% |
| CCTTCTTGAATCGATTGGAA+TGG | + | tig0020386:107472-107491 | None:intergenic | 40.0% | |
| ! | CCATTCCAATCGATTCAAGA+AGG | - | tig0020386:107469-107488 | Msa1380690:CDS | 40.0% |
| ACCCGAATCTTCTTCCATAA+TGG | - | tig0020386:107756-107775 | Msa1380690:CDS | 40.0% | |
| GTACGGAATAATAGTCTCGT+TGG | - | tig0020386:107778-107797 | Msa1380690:CDS | 40.0% | |
| AGTTCTATCTTGATACCACC+CGG | - | tig0020386:107943-107962 | Msa1380690:CDS | 40.0% | |
| !!! | TTTTTTTTTACCGTTCCGGG+TGG | + | tig0020386:107961-107980 | None:intergenic | 40.0% |
| CCCGGAACGGTAAAAAAAAA+TGG | - | tig0020386:107961-107980 | Msa1380690:CDS | 40.0% | |
| ! | TCTTGGTAGTTGTGATCCAT+TGG | + | tig0020386:108022-108041 | None:intergenic | 40.0% |
| ! | TTTTCCCCAAGATCTATTCC+AGG | - | tig0020386:108112-108131 | Msa1380690:CDS | 40.0% |
| CTTTCCTGGAATAGATCTTG+GGG | + | tig0020386:108119-108138 | None:intergenic | 40.0% | |
| CTCTTTCCTGGAATAGATCT+TGG | + | tig0020386:108121-108140 | None:intergenic | 40.0% | |
| GTTCCAGATTATCTCTTTCC+TGG | + | tig0020386:108133-108152 | None:intergenic | 40.0% | |
| GGAAATGGAAAATCCATTCG+GGG | - | tig0020386:108179-108198 | Msa1380690:CDS | 40.0% | |
| TACTTCAACAAAGGAAGAGG+GGG | + | tig0020386:108290-108309 | None:intergenic | 40.0% | |
| ! | CCTTTGAAAATCGGACGTGA+GGG | + | tig0020386:103877-103896 | None:intergenic | 45.0% |
| ! | CCTCACGTCCGATTTTCAAA+GGG | - | tig0020386:103875-103894 | Msa1380690:CDS | 45.0% |
| ! | CTCACGTCCGATTTTCAAAG+GGG | - | tig0020386:103876-103895 | Msa1380690:CDS | 45.0% |
| ! | TCACGTCCGATTTTCAAAGG+GGG | - | tig0020386:103877-103896 | Msa1380690:CDS | 45.0% |
| ! | GGATCTCCCCCTTTGAAAAT+CGG | + | tig0020386:103886-103905 | None:intergenic | 45.0% |
| AAGGGGGAGATCCATCTTAT+TGG | - | tig0020386:103893-103912 | Msa1380690:CDS | 45.0% | |
| ATAATCGGTCTCAATTCGGG+AGG | + | tig0020386:104322-104341 | None:intergenic | 45.0% | |
| !! | CTCCTTGATAATGGAATCCG+CGG | - | tig0020386:104505-104524 | Msa1380690:CDS | 45.0% |
| AGATTTCGAGAGACTCTGCT+TGG | - | tig0020386:104598-104617 | Msa1380690:CDS | 45.0% | |
| !! | AGCTCTATTGCTATTTCGCG+GGG | + | tig0020386:104697-104716 | None:intergenic | 45.0% |
| AGCGCCTACTTTGCATAGAT+TGG | - | tig0020386:104864-104883 | Msa1380690:CDS | 45.0% | |
| GCGCCTACTTTGCATAGATT+GGG | - | tig0020386:104865-104884 | Msa1380690:CDS | 45.0% | |
| GCTTGAGCCTCCAAAGATAA+AGG | + | tig0020386:105003-105022 | None:intergenic | 45.0% | |
| TTAACTAGCGGAAATCGTCG+AGG | - | tig0020386:105126-105145 | Msa1380690:CDS | 45.0% | |
| ! | GTCGAGGTATTTGTGCAAAC+AGG | - | tig0020386:105142-105161 | Msa1380690:CDS | 45.0% |
| !!! | TCGATAGTCCTTTTTGGCTC+CGG | - | tig0020386:105301-105320 | Msa1380690:CDS | 45.0% |
| ! | TGCATTGATCTATTCGCCAC+CGG | + | tig0020386:105323-105342 | None:intergenic | 45.0% |
| GAATCCCACTGAGTGGAATA+TGG | - | tig0020386:105707-105726 | Msa1380690:CDS | 45.0% | |
| ACCTCCATATTCCACTCAGT+GGG | + | tig0020386:105714-105733 | None:intergenic | 45.0% | |
| TACCTCCATATTCCACTCAG+TGG | + | tig0020386:105715-105734 | None:intergenic | 45.0% | |
| !! | TGGAGGTACTTATGGCAGAA+CGG | - | tig0020386:105727-105746 | Msa1380690:CDS | 45.0% |
| GGCATATACATCACACATCC+TGG | - | tig0020386:105833-105852 | Msa1380690:CDS | 45.0% | |
| !! | TGGACTAGCCATCCTTTAGA+AGG | + | tig0020386:105936-105955 | None:intergenic | 45.0% |
| CACCAATTAGTCGGAATGAG+AGG | - | tig0020386:106167-106186 | Msa1380690:CDS | 45.0% | |
| AGTATCCACAACCCCTTTAC+GGG | + | tig0020386:106294-106313 | None:intergenic | 45.0% | |
| CAGTATCCACAACCCCTTTA+CGG | + | tig0020386:106295-106314 | None:intergenic | 45.0% | |
| !! | TACACGTCGACTTGTTGAAG+TGG | - | tig0020386:106343-106362 | Msa1380690:CDS | 45.0% |
| GTTGTACGTCGAACAGATTG+CGG | - | tig0020386:106377-106396 | Msa1380690:intron | 45.0% | |
| CGTATTCCTACAGGTAAAGG+GGG | + | tig0020386:106600-106619 | None:intergenic | 45.0% | |
| GATCCAAGACGTATTCCTAC+AGG | + | tig0020386:106609-106628 | None:intergenic | 45.0% | |
| ! | TGGATCTGCCGATTGTGTTA+TGG | - | tig0020386:106623-106642 | Msa1380690:intron | 45.0% |
| ! | GGATCTGCCGATTGTGTTAT+GGG | - | tig0020386:106624-106643 | Msa1380690:intron | 45.0% |
| GTAGAATTGGGAGAAGCTGT+AGG | - | tig0020386:106671-106690 | Msa1380690:intron | 45.0% | |
| TGGTCAATCTATTGGCGAAC+CGG | - | tig0020386:106703-106722 | Msa1380690:intron | 45.0% | |
| ! | CATACTGGTGGAGTATTCAC+AGG | - | tig0020386:106752-106771 | Msa1380690:intron | 45.0% |
| ! | TACTGGTGGAGTATTCACAG+GGG | - | tig0020386:106754-106773 | Msa1380690:intron | 45.0% |
| ATCCATGACGTGTACGTGTA+GGG | + | tig0020386:106844-106863 | None:intergenic | 45.0% | |
| TATCCATGACGTGTACGTGT+AGG | + | tig0020386:106845-106864 | None:intergenic | 45.0% | |
| ACTCAGAAGGCGAAATGCAT+TGG | - | tig0020386:107065-107084 | Msa1380690:CDS | 45.0% | |
| TTCGGATGCATGGTACACAT+CGG | + | tig0020386:107095-107114 | None:intergenic | 45.0% | |
| TCTTATCAGGAAAGTCGTGC+AGG | - | tig0020386:107164-107183 | Msa1380690:CDS | 45.0% | |
| AACGAACTAATGCGACCTTC+TGG | - | tig0020386:107496-107515 | Msa1380690:CDS | 45.0% | |
| ! | ATATCCATTTTCCCGGAGAG+AGG | - | tig0020386:107902-107921 | Msa1380690:CDS | 45.0% |
| ! | TATCCATTTTCCCGGAGAGA+GGG | - | tig0020386:107903-107922 | Msa1380690:CDS | 45.0% |
| GATATCTTATCCCTCTCTCC+GGG | + | tig0020386:107916-107935 | None:intergenic | 45.0% | |
| GGATATCTTATCCCTCTCTC+CGG | + | tig0020386:107917-107936 | None:intergenic | 45.0% | |
| TATCTTGATACCACCCGGAA+CGG | - | tig0020386:107948-107967 | Msa1380690:CDS | 45.0% | |
| ! | CCCTCACGTCCGATTTTCAA+AGG | - | tig0020386:103874-103893 | Msa1380690:CDS | 50.0% |
| ! | CCCTTTGAAAATCGGACGTG+AGG | + | tig0020386:103878-103897 | None:intergenic | 50.0% |
| CTCAATTCGGGAGGAAGAAC+TGG | + | tig0020386:104313-104332 | None:intergenic | 50.0% | |
| GTCCGCGGATTCCATTATCA+AGG | + | tig0020386:104510-104529 | None:intergenic | 50.0% | |
| AATCCGCGGACAACCAATGA+GGG | - | tig0020386:104519-104538 | Msa1380690:CDS | 50.0% | |
| GGGCGTTCTGTTATTGTCGT+AGG | - | tig0020386:104640-104659 | Msa1380690:CDS | 50.0% | |
| GGCGCTCTATTCAGCAATAC+TGG | + | tig0020386:104850-104869 | None:intergenic | 50.0% | |
| AACCTCTTGTCTCCGGCTAT+TGG | - | tig0020386:105054-105073 | Msa1380690:CDS | 50.0% | |
| ACCTCTTGTCTCCGGCTATT+GGG | - | tig0020386:105055-105074 | Msa1380690:CDS | 50.0% | |
| GAAATGGGATCCCCAATAGC+CGG | + | tig0020386:105069-105088 | None:intergenic | 50.0% | |
| !!! | ATAGTCCTTTTTGGCTCCGG+TGG | - | tig0020386:105304-105323 | Msa1380690:CDS | 50.0% |
| TCCCACTGAGTGGAATATGG+AGG | - | tig0020386:105710-105729 | Msa1380690:CDS | 50.0% | |
| !! | GGAGGTACTTATGGCAGAAC+GGG | - | tig0020386:105728-105747 | Msa1380690:CDS | 50.0% |
| GCTGTACGAACATCAGATGC+TGG | - | tig0020386:106314-106333 | Msa1380690:CDS | 50.0% | |
| ACAGATTGCGGTACGATTCG+CGG | - | tig0020386:106389-106408 | Msa1380690:intron | 50.0% | |
| TTCGAACCCCCTTTACCTGT+AGG | - | tig0020386:106591-106610 | Msa1380690:intron | 50.0% | |
| ! | TCTGCCGATTGTGTTATGGG+CGG | - | tig0020386:106627-106646 | Msa1380690:intron | 50.0% |
| GACTCCGCCCATAACACAAT+CGG | + | tig0020386:106634-106653 | None:intergenic | 50.0% | |
| TATGGGCGGAGTCCTATTCA+TGG | - | tig0020386:106641-106660 | Msa1380690:intron | 50.0% | |
| ATGGGCGGAGTCCTATTCAT+GGG | - | tig0020386:106642-106661 | Msa1380690:intron | 50.0% | |
| TCTACCAGGTCCCCATGAAT+AGG | + | tig0020386:106656-106675 | None:intergenic | 50.0% | |
| TCATGGGGACCTGGTAGAAT+TGG | - | tig0020386:106658-106677 | Msa1380690:intron | 50.0% | |
| CATGGGGACCTGGTAGAATT+GGG | - | tig0020386:106659-106678 | Msa1380690:intron | 50.0% | |
| CAGCTTCTCCCAATTCTACC+AGG | + | tig0020386:106670-106689 | None:intergenic | 50.0% | |
| GGTCAATCTATTGGCGAACC+GGG | - | tig0020386:106704-106723 | Msa1380690:intron | 50.0% | |
| ! | ACTGGTGGAGTATTCACAGG+GGG | - | tig0020386:106755-106774 | Msa1380690:intron | 50.0% |
| !! | AGTATTCACAGGGGGTACTG+CGG | - | tig0020386:106763-106782 | Msa1380690:intron | 50.0% |
| AAGAAGTCGAGTAGGCGGAT+TGG | - | tig0020386:107828-107847 | Msa1380690:CDS | 50.0% | |
| TATCCCTCTCTCCGGGAAAA+TGG | + | tig0020386:107909-107928 | None:intergenic | 50.0% | |
| TGTGTCGGAAATTCCCCGAA+TGG | + | tig0020386:108195-108214 | None:intergenic | 50.0% | |
| TTCGGGGAATTTCCGACACA+AGG | - | tig0020386:108195-108214 | Msa1380690:CDS | 50.0% | |
| GAATCCGCGGACAACCAATG+AGG | - | tig0020386:104518-104537 | Msa1380690:CDS | 55.0% | |
| CCTCTTGTCTCCGGCTATTG+GGG | - | tig0020386:105056-105075 | Msa1380690:CDS | 55.0% | |
| ATTCGCCACCGGAGCCAAAA+AGG | + | tig0020386:105312-105331 | None:intergenic | 55.0% | |
| TCGAACCGAATCCCACTGAG+TGG | - | tig0020386:105700-105719 | Msa1380690:CDS | 55.0% | |
| TCTTGCTACGGAGCCCGTAA+AGG | - | tig0020386:106278-106297 | Msa1380690:CDS | 55.0% | |
| CTTGCTACGGAGCCCGTAAA+GGG | - | tig0020386:106279-106298 | Msa1380690:CDS | 55.0% | |
| TTGCTACGGAGCCCGTAAAG+GGG | - | tig0020386:106280-106299 | Msa1380690:CDS | 55.0% | |
| CAGATTGCGGTACGATTCGC+GGG | - | tig0020386:106390-106409 | Msa1380690:intron | 55.0% | |
| TGGGCGGAGTCCTATTCATG+GGG | - | tig0020386:106643-106662 | Msa1380690:intron | 55.0% | |
| GAGTCCTATTCATGGGGACC+TGG | - | tig0020386:106649-106668 | Msa1380690:intron | 55.0% | |
| CACCCTACACGTACACGTCA+TGG | - | tig0020386:106839-106858 | Msa1380690:intron | 55.0% | |
| AGTGATTGCTGAGATCCGCG+CGG | - | tig0020386:106991-107010 | Msa1380690:intron | 55.0% | |
| ! | CGTCCCTCATTGGTTGTCCG+CGG | + | tig0020386:104525-104544 | None:intergenic | 60.0% |
| CGCGGACAACCAATGAGGGA+CGG | - | tig0020386:104523-104542 | Msa1380690:CDS | 60.0% | |
| CCCCAATAGCCGGAGACAAG+AGG | + | tig0020386:105059-105078 | None:intergenic | 60.0% | |
| TATGTGCGAGCCCCCTCGAA+TGG | - | tig0020386:106788-106807 | Msa1380690:intron | 60.0% | |
| GTGATTGCTGAGATCCGCGC+GGG | - | tig0020386:106992-107011 | Msa1380690:intron | 60.0% | |
| CGGAGCCCGTAAAGGGGTTG+TGG | - | tig0020386:106286-106305 | Msa1380690:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020386 | gene | 103863 | 108310 | 103863 | ID=Msa1380690;Name=Msa1380690 |
| tig0020386 | mRNA | 103863 | 108310 | 103863 | ID=Msa1380690-mRNA-1;Parent=Msa1380690;Name=Msa1380690-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|3|0|1152 |
| tig0020386 | exon | 107026 | 108310 | 107026 | ID=Msa1380690-mRNA-1:exon:7184;Parent=Msa1380690-mRNA-1 |
| tig0020386 | exon | 104396 | 106392 | 104396 | ID=Msa1380690-mRNA-1:exon:7183;Parent=Msa1380690-mRNA-1 |
| tig0020386 | exon | 103863 | 104039 | 103863 | ID=Msa1380690-mRNA-1:exon:7182;Parent=Msa1380690-mRNA-1 |
| tig0020386 | CDS | 107026 | 108310 | 107026 | ID=Msa1380690-mRNA-1:cds;Parent=Msa1380690-mRNA-1 |
| tig0020386 | CDS | 104396 | 106392 | 104396 | ID=Msa1380690-mRNA-1:cds;Parent=Msa1380690-mRNA-1 |
| tig0020386 | CDS | 103863 | 104039 | 103863 | ID=Msa1380690-mRNA-1:cds;Parent=Msa1380690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
