AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0268740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0268740 MtrunA17_Chr4g0015651 80.471 425 4 5 209 554 7 431 0.0 640
Msa0268740 MtrunA17_Chr4g0016741 80.471 425 4 5 209 554 7 431 0.0 640
Msa0268740 MtrunA17_CPg0492941 80.471 425 4 5 209 554 7 431 0.0 640
Msa0268740 MtrunA17_MTg0490471 54.042 433 111 6 210 554 9 441 1.38e-139 414
Msa0268740 MtrunA17_Chr2g0278821 84.656 189 15 2 380 554 24 212 1.42e-104 316
Msa0268740 MtrunA17_CPg0492961 94.118 119 2 1 95 208 49 167 7.09e-69 220
Msa0268740 MtrunA17_Chr2g0286451 65.574 183 8 2 271 398 7 189 2.19e-67 216
Msa0268740 MtrunA17_Chr4g0040631 88.034 117 4 1 209 315 7 123 9.17e-59 192
Msa0268740 MtrunA17_Chr4g0016711 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa0268740 MtrunA17_CPg0492971 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa0268740 MtrunA17_Chr4g0015621 98.765 81 1 0 1 81 1 81 4.21e-46 156
Msa0268740 MtrunA17_Chr4g0061471 73.333 75 8 1 292 354 1 75 1.05e-27 106
Msa0268740 MtrunA17_Chr1g0211291 27.714 350 166 10 227 502 44 380 2.49e-20 94.4
Msa0268740 MtrunA17_Chr7g0250051 27.507 349 167 10 227 502 43 378 7.39e-20 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0268740 ATCG00120.1 77.647 425 16 5 209 554 7 431 0.0 620
Msa0268740 ATMG01190.1 51.039 433 124 6 210 554 9 441 1.90e-130 390
Msa0268740 AT2G07698.1 49.260 473 150 7 172 554 239 711 5.86e-129 395
Msa0268740 ATCG00130.1 78.689 122 21 1 93 209 49 170 1.00e-57 191
Msa0268740 ATCG00140.1 95.062 81 4 0 1 81 1 81 5.31e-44 151
Msa0268740 AT4G38510.5 27.794 349 166 10 227 502 50 385 3.88e-21 97.1
Msa0268740 AT4G38510.1 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0268740 AT4G38510.3 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0268740 AT4G38510.4 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0268740 AT4G38510.2 27.794 349 166 10 227 502 43 378 4.43e-21 97.1
Msa0268740 AT1G76030.1 28.378 296 140 7 279 502 82 377 6.30e-20 93.6
Msa0268740 AT1G20260.1 36.000 125 79 1 379 502 254 378 7.97e-15 77.4

Find 125 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAGCTTTAACTATTTA+TGG 0.037973 2_2:-70386789 Msa0268740:CDS
ACCAGTAAGTGAGGGTTATT+TGG 0.166311 2_2:-70384548 Msa0268740:CDS
TGTAGGCATTGCTTTGAATT+TGG 0.201612 2_2:-70384662 Msa0268740:CDS
CCCAAATAACCCTCACTTAC+TGG 0.241036 2_2:+70384547 None:intergenic
TTATTTACATTCTCGTCTTT+TGG 0.245014 2_2:-70383966 Msa0268740:CDS
AAATGTTGGTGTTGTATTAA+TGG 0.258988 2_2:-70384632 Msa0268740:CDS
GGCCAGCGAGAATTAATTAT+TGG 0.267680 2_2:-70384355 Msa0268740:CDS
CGGAAGCAGAGGACAAAATA+AGG 0.270738 2_2:-70386839 Msa0268740:CDS
GGTAGCTGGTAAATTAAAAT+TGG 0.278592 2_2:-70383708 Msa0268740:CDS
TCTCGCTGGCCACGCCCTAT+AGG 0.298734 2_2:+70384367 None:intergenic
GCCGTCGGGCTTGCTTCTAT+TGG 0.311843 2_2:-70386921 Msa0268740:CDS
GCTGCTTCTGTTATCGCTGC+TGG 0.315135 2_2:-70386948 Msa0268740:CDS
TGGAAGCTTTAACTATTTAT+GGG 0.316470 2_2:-70386788 Msa0268740:CDS
CTCGCTGGCCACGCCCTATA+GGG 0.318797 2_2:+70384368 None:intergenic
CTACTTTCCTTAAGCGGGCC+CGG 0.340021 2_2:+70385239 None:intergenic
ATTGATTCTATGATCCCTAT+AGG 0.359827 2_2:-70384382 Msa0268740:CDS
GCTGCAGGGCAAGCTGTAGA+AGG 0.363265 2_2:-70386876 Msa0268740:CDS
GCGATAAGCCTGTGCTTGTT+TGG 0.364708 2_2:+70384048 None:intergenic
GCCAGCGAGAATTAATTATT+GGG 0.365780 2_2:-70384354 Msa0268740:CDS
GGGTACTTTATTACTTAGTC+TGG 0.366228 2_2:-70386817 Msa0268740:CDS
CCTGATTGGGTCTCAACTAT+TGG 0.368964 2_2:+70383890 None:intergenic
TGGTAAATTAAAATTGGAAT+TGG 0.382867 2_2:-70383702 Msa0268740:CDS
CACAGTGAGAGGAGCTGATT+GGG 0.383779 2_2:+70383571 None:intergenic
TAATTCAATTTATACAACTT+TGG 0.388293 2_2:-70385149 Msa0268740:CDS
ATTTCTCCTCGACCATCAAT+AGG 0.391542 2_2:+70384499 None:intergenic
AATGTTGGTGTTGTATTAAT+GGG 0.391664 2_2:-70384631 Msa0268740:CDS
TCCTTATACAGGTGCAGCTC+TGG 0.392160 2_2:-70384125 Msa0268740:intron
GCCCTAGCTAAACCTATTGA+TGG 0.393369 2_2:-70384511 Msa0268740:CDS
CCAATAGTTGAGACCCAATC+AGG 0.395916 2_2:-70383890 Msa0268740:CDS
AGATACAATTCTCAATCAAC+AGG 0.401486 2_2:-70384299 Msa0268740:CDS
CCGGGATACGCTTCGCGACC+TGG 0.409309 2_2:+70383998 None:intergenic
AAGCTGAAACATCTCCTGAT+TGG 0.409535 2_2:+70383876 None:intergenic
AGAAAGCCCGGGCCCGCTTA+AGG 0.414131 2_2:-70385246 Msa0268740:CDS
GCTAAATTAAGTTCTCAGTT+AGG 0.415873 2_2:-70383935 Msa0268740:intron
GCTTCTATTGGACCTGGAGT+TGG 0.416315 2_2:-70386909 Msa0268740:CDS
CCAGTAAGTGAGGGTTATTT+GGG 0.424091 2_2:-70384547 Msa0268740:CDS
ATTATTGGGGACAGACAAAC+AGG 0.427629 2_2:-70384340 Msa0268740:CDS
TCGCTGCTGGGTTGGCCGTC+GGG 0.427770 2_2:-70386935 Msa0268740:CDS
ATCGCTGCTGGGTTGGCCGT+CGG 0.428270 2_2:-70386936 Msa0268740:CDS
AAATATTTGGCCATCTGTAA+TGG 0.434228 2_2:+70383832 None:intergenic
TTGATTCTATGATCCCTATA+GGG 0.437674 2_2:-70384381 Msa0268740:CDS
CCACAGTGAGAGGAGCTGAT+TGG 0.438205 2_2:+70383570 None:intergenic
GTAATGGAAATTACATTAGT+AGG 0.444650 2_2:+70383848 None:intergenic
CGTTTCTACTTTCCTTAAGC+GGG 0.444690 2_2:+70385234 None:intergenic
ATATGTGTTTATGTAGCTAT+TGG 0.445393 2_2:-70384265 Msa0268740:intron
GCGGATCGGTTTCGAGTGAA+TGG 0.446998 2_2:-70385208 Msa0268740:intron
TAAAGCTACGCAAAATCAAT+TGG 0.449089 2_2:-70383630 Msa0268740:CDS
TTCAAAATTCAGAAGAACTA+CGG 0.449969 2_2:-70385291 Msa0268740:CDS
GGAAGCAGCCGTTGAACAGC+TGG 0.450450 2_2:-70385269 Msa0268740:CDS
ACAAGCATTACAAGGAGCTC+TGG 0.452163 2_2:-70385044 Msa0268740:CDS
TTCGTAATAGAAGAGACATT+TGG 0.452176 2_2:+70384026 None:intergenic
AGCTGAAACATCTCCTGATT+GGG 0.452206 2_2:+70383877 None:intergenic
GGAAGTTCGGTAAAAGCAAC+AGG 0.457398 2_2:-70384586 Msa0268740:CDS
AAAAGATTAAACAAAAGGAT+TGG 0.459809 2_2:+70386737 None:intergenic
AGCTTTAACTATTTATGGGC+TGG 0.460263 2_2:-70386784 Msa0268740:CDS
CTGCTTCTGTTATCGCTGCT+GGG 0.461552 2_2:-70386947 Msa0268740:CDS
TACTTTCCTTAAGCGGGCCC+GGG 0.461743 2_2:+70385240 None:intergenic
ATAAGCCTGTGCTTGTTTGG+AGG 0.462375 2_2:+70384051 None:intergenic
CGTGTATGAGCCTCTTCAAA+CGG 0.465005 2_2:-70384416 Msa0268740:CDS
TTGAACAGCTGGAGAAAGCC+CGG 0.472109 2_2:-70385258 Msa0268740:CDS
GGAAGCAGAGGACAAAATAA+GGG 0.473459 2_2:-70386838 Msa0268740:CDS
AGAAGGGATTGCGCGACAAC+CGG 0.475077 2_2:-70386859 Msa0268740:CDS
TCGAGGAGAAATTTCAGCTT+CGG 0.476522 2_2:-70384488 Msa0268740:CDS
CCAGGTCGCGAAGCGTATCC+CGG 0.478786 2_2:-70383998 Msa0268740:CDS
GGGCTTGCTTCTATTGGACC+TGG 0.481695 2_2:-70386915 Msa0268740:CDS
TAACTGAGAACTTAATTTAG+CGG 0.485288 2_2:+70383937 None:intergenic
CGCCGATCCAACTCTGGAAA+CGG 0.485937 2_2:+70383754 None:intergenic
TATATTGCTCAATACGTTCA+CGG 0.487151 2_2:+70384803 None:intergenic
AAATTTCAGCTTCGGAATCT+CGG 0.492871 2_2:-70384480 Msa0268740:intron
GTTGGTCAAGGTACAGCTGC+AGG 0.497139 2_2:-70386891 Msa0268740:CDS
GGTGTTGTATTAATGGGTGA+TGG 0.501676 2_2:-70384625 Msa0268740:CDS
GGCTTTCTCCAGCTGTTCAA+CGG 0.504402 2_2:+70385261 None:intergenic
TCTGCCGATCTATTCAATGC+TGG 0.509351 2_2:-70383806 Msa0268740:CDS
GCTGATACAAGAGGGAAGTT+CGG 0.510716 2_2:-70384599 Msa0268740:CDS
TCAAAATTCAGAAGAACTAC+GGG 0.510719 2_2:-70385290 Msa0268740:CDS
GTGTATGAGCCTCTTCAAAC+GGG 0.511475 2_2:-70384415 Msa0268740:CDS
TTCTGTTATCGCTGCTGGGT+TGG 0.514112 2_2:-70386943 Msa0268740:CDS
TGATTAAAGTGTGACGTTCA+CGG 0.516487 2_2:+70384086 None:intergenic
CCGTTTCTACTTTCCTTAAG+CGG 0.521089 2_2:+70385233 None:intergenic
TAAGCCTGTGCTTGTTTGGA+GGG 0.526272 2_2:+70384052 None:intergenic
GAAATACCCACATTAATAGC+TGG 0.538501 2_2:+70383776 None:intergenic
CCCCAATAATTAATTCTCGC+TGG 0.539649 2_2:+70384353 None:intergenic
GACCATCAATAGGTTTAGCT+AGG 0.542268 2_2:+70384509 None:intergenic
ATTGGACCTGGAGTTGGTCA+AGG 0.543278 2_2:-70386903 Msa0268740:CDS
ATCTGTTCTTCCACAGTGAG+AGG 0.551959 2_2:+70383560 None:intergenic
TGCGCGACAACCGGAAGCAG+AGG 0.554171 2_2:-70386850 Msa0268740:CDS
AATGTAATTTCCATTACAGA+TGG 0.557336 2_2:-70383842 Msa0268740:CDS
AAAGCCATGAAACAGGTAGC+TGG 0.558354 2_2:-70383722 Msa0268740:intron
CAAGCATTACAAGGAGCTCT+GGG 0.568354 2_2:-70385043 Msa0268740:CDS
AAGTAGAAACGGAAGCGGAT+CGG 0.570689 2_2:-70385222 Msa0268740:CDS
CCGCTTAAGGAAAGTAGAAA+CGG 0.573518 2_2:-70385233 Msa0268740:CDS
CGATCCCTCCAAACAAGCAC+AGG 0.574680 2_2:-70384056 Msa0268740:CDS
TGAACAGCTGGAGAAAGCCC+GGG 0.575165 2_2:-70385257 Msa0268740:CDS
TGCTCAGATACCAGTAAGTG+AGG 0.577261 2_2:-70384557 Msa0268740:CDS
TGAATTAGTCGAATTTGAAG+AGG 0.580561 2_2:-70384689 Msa0268740:CDS
CTGCAGGGCAAGCTGTAGAA+GGG 0.582070 2_2:-70386875 Msa0268740:CDS
GCAATAAGTCCCGTTTGAAG+AGG 0.589598 2_2:+70384406 None:intergenic
ACAGGTACTGTACTTCAAGT+AGG 0.592569 2_2:-70384757 Msa0268740:CDS
GCTGTACCTTGACCAACTCC+AGG 0.593501 2_2:+70386897 None:intergenic
GAATTTGAAGAGGGTACTGT+AGG 0.593991 2_2:-70384679 Msa0268740:CDS
CGATTAATCAAGTGCAACAG+AGG 0.596922 2_2:-70385075 Msa0268740:CDS
CTTCTATTACGAAGACCACC+AGG 0.597315 2_2:-70384016 Msa0268740:CDS
ACCATCAATAGGTTTAGCTA+GGG 0.601516 2_2:+70384510 None:intergenic
ATCAGACCAGCTATTAATGT+GGG 0.604091 2_2:-70383782 Msa0268740:CDS
GAGTTACATTTACGTACGAT+CGG 0.617220 2_2:-70384995 Msa0268740:intron
GAATTAGTCGAATTTGAAGA+GGG 0.619600 2_2:-70384688 Msa0268740:CDS
GCTAAACCTATTGATGGTCG+AGG 0.620970 2_2:-70384505 Msa0268740:CDS
AAGGAAAGTAGAAACGGAAG+CGG 0.622485 2_2:-70385227 Msa0268740:CDS
AATCAGACCAGCTATTAATG+TGG 0.625394 2_2:-70383783 Msa0268740:CDS
GATTCCAGCATTGAATAGAT+CGG 0.626418 2_2:+70383802 None:intergenic
TCTATGATCCCTATAGGGCG+TGG 0.628110 2_2:-70384376 Msa0268740:CDS
CCAGCGAGAATTAATTATTG+GGG 0.636830 2_2:-70384353 Msa0268740:CDS
TCCAATAGAAGCAAGCCCGA+CGG 0.638086 2_2:+70386920 None:intergenic
ACAGAAGCAGCAGAAATCAG+TGG 0.640161 2_2:+70386960 None:intergenic
TTGGTCAAGGTACAGCTGCA+GGG 0.643472 2_2:-70386890 Msa0268740:CDS
GATTAATCAAGTGCAACAGA+GGG 0.644246 2_2:-70385074 Msa0268740:CDS
ACGCAAAATCAATTGGCAAG+AGG 0.645378 2_2:-70383623 Msa0268740:CDS
CGTTTGAAGAGGCTCATACA+CGG 0.655862 2_2:+70384417 None:intergenic
GAAGCAGAGGACAAAATAAG+GGG 0.658398 2_2:-70386837 Msa0268740:CDS
GATGGTTTGCTGATACAAGA+GGG 0.671964 2_2:-70384607 Msa0268740:CDS
GCTCAGATACCAGTAAGTGA+GGG 0.673181 2_2:-70384556 Msa0268740:CDS
TGATGGTTTGCTGATACAAG+AGG 0.676056 2_2:-70384608 Msa0268740:CDS
ACTGTACTTCAAGTAGGCGA+CGG 0.682410 2_2:-70384751 Msa0268740:CDS
GGATACGCTTCGCGACCTGG+TGG 0.699302 2_2:+70384001 None:intergenic
GATACAATTCTCAATCAACA+GGG 0.744742 2_2:-70384298 Msa0268740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAAAGATTAAACAAA+AGG + chr2_2:70383397-70383416 None:intergenic 10.0%
!! TCAATTCTAAATTAAATAAA+GGG + chr2_2:70383619-70383638 None:intergenic 10.0%
!! TTCAATTCTAAATTAAATAA+AGG + chr2_2:70383620-70383639 None:intergenic 10.0%
!! ACTAATTATGAATATAATAA+AGG + chr2_2:70386846-70386865 None:intergenic 10.0%
!! AATTCTAAATTAAATAAAGG+GGG + chr2_2:70383617-70383636 None:intergenic 15.0%
!! CAATTCTAAATTAAATAAAG+GGG + chr2_2:70383618-70383637 None:intergenic 15.0%
!! AATCAAAAAATCAAAAAACT+GGG - chr2_2:70383882-70383901 Msa0268740:CDS 15.0%
!!! TGTATTAATTTTTTTTGGAA+AGG - chr2_2:70384068-70384087 Msa0268740:CDS 15.0%
!!! GTATTAATTTTTTTTGGAAA+GGG - chr2_2:70384069-70384088 Msa0268740:CDS 15.0%
!! ATAAATTAATCAGAATTCTT+TGG - chr2_2:70384508-70384527 Msa0268740:CDS 15.0%
!! CAATACAAGATTAAAATATT+TGG + chr2_2:70384590-70384609 None:intergenic 15.0%
!!! CAAATATTTTAATCTTGTAT+TGG - chr2_2:70384588-70384607 Msa0268740:CDS 15.0%
!! TAATTCAATTTATACAACTT+TGG - chr2_2:70384977-70384996 Msa0268740:intron 15.0%
!! TTCAAATTAAGAAATATTCA+TGG - chr2_2:70385266-70385285 Msa0268740:CDS 15.0%
!!! TGTATTTACAATTTTTACTT+CGG + chr2_2:70385352-70385371 None:intergenic 15.0%
!! AAAAGATTAAACAAAAGGAT+TGG + chr2_2:70383392-70383411 None:intergenic 20.0%
!! ATAAATTGTAGGAGTTAAAT+CGG + chr2_2:70383532-70383551 None:intergenic 20.0%
!! TAGATTCTATATTCTCTAAT+TGG + chr2_2:70383720-70383739 None:intergenic 20.0%
!! GAATCAAAAAATCAAAAAAC+TGG - chr2_2:70383881-70383900 Msa0268740:CDS 20.0%
!!! TAGATTTGTTGCTAAAATAT+CGG + chr2_2:70384025-70384044 None:intergenic 20.0%
!!! CTAGGTGTATTAATTTTTTT+TGG - chr2_2:70384063-70384082 Msa0268740:CDS 20.0%
!! GTTTATTTCAAAGAATAGAT+TGG - chr2_2:70384106-70384125 Msa0268740:CDS 20.0%
!! ATTCTGATTAATTTATACGT+AGG + chr2_2:70384504-70384523 None:intergenic 20.0%
!! TACAAGATTAAAATATTTGG+AGG + chr2_2:70384587-70384606 None:intergenic 20.0%
!! GAAGTAAAAATTGTAAATAC+AGG - chr2_2:70385351-70385370 Msa0268740:CDS 20.0%
!! ATGTAAATAAAAAACATCTC+CGG + chr2_2:70386150-70386169 None:intergenic 20.0%
!! TGGTAAATTAAAATTGGAAT+TGG - chr2_2:70386424-70386443 Msa0268740:intron 20.0%
!! CAGATAATAACTATTTATAC+TGG - chr2_2:70386584-70386603 Msa0268740:intron 20.0%
!! GATATGATTTCGTTAAATTT+AGG + chr2_2:70386695-70386714 None:intergenic 20.0%
!! ATGGAAGCTTTAACTATTTA+TGG - chr2_2:70383337-70383356 Msa0268740:intron 25.0%
!! TGGAAGCTTTAACTATTTAT+GGG - chr2_2:70383338-70383357 Msa0268740:intron 25.0%
!!! AATACATATTGTTTTTTCCG+TGG - chr2_2:70383431-70383450 Msa0268740:intron 25.0%
! CCTACAATTTATTCTTCATT+CGG - chr2_2:70383540-70383559 Msa0268740:intron 25.0%
!! AAAATTAGTCTATCCATAAG+AGG - chr2_2:70383917-70383936 Msa0268740:intron 25.0%
! AATGAAGCAAAGAAAAGAAT+CGG + chr2_2:70383968-70383987 None:intergenic 25.0%
!! TATAATGAAAAAAGTGCAGT+TGG + chr2_2:70384138-70384157 None:intergenic 25.0%
! TTTCTACCACTATGTTAATA+CGG - chr2_2:70384352-70384371 Msa0268740:CDS 25.0%
! TTCTCTTTACGATGAAAAAT+AGG - chr2_2:70384426-70384445 Msa0268740:intron 25.0%
! TTTGCTGACAATTATTTGTT+TGG - chr2_2:70384551-70384570 Msa0268740:CDS 25.0%
! TGTTTAGAAATAGAGAAAAG+AGG - chr2_2:70384626-70384645 Msa0268740:CDS 25.0%
! CTCATTCGATAATAAAGATA+GGG - chr2_2:70384654-70384673 Msa0268740:CDS 25.0%
! CATGAATCTTTCAATTCATT+TGG + chr2_2:70384710-70384729 None:intergenic 25.0%
! TGAATTGAAAGATTCATGTT+TGG - chr2_2:70384712-70384731 Msa0268740:intron 25.0%
! TTCAAAATTCAGAAGAACTA+CGG - chr2_2:70384835-70384854 Msa0268740:intron 25.0%
!! GATTCATTTTGAACAACAAA+GGG - chr2_2:70385028-70385047 Msa0268740:CDS 25.0%
! GTGCTAATATTGATATGTTT+GGG - chr2_2:70385153-70385172 Msa0268740:CDS 25.0%
! TGCTAATATTGATATGTTTG+GGG - chr2_2:70385154-70385173 Msa0268740:CDS 25.0%
! TCTACTAGAATATAGAGTAT+AGG - chr2_2:70385208-70385227 Msa0268740:intron 25.0%
!!! TGAATTTGATTCTTTTTCGA+AGG + chr2_2:70385250-70385269 None:intergenic 25.0%
!! AATTTGGAATCCAAAAATGT+TGG - chr2_2:70385480-70385499 Msa0268740:intron 25.0%
!! TAATACAACACCAACATTTT+TGG + chr2_2:70385493-70385512 None:intergenic 25.0%
!!! AAATGTTGGTGTTGTATTAA+TGG - chr2_2:70385494-70385513 Msa0268740:intron 25.0%
!!! AATGTTGGTGTTGTATTAAT+GGG - chr2_2:70385495-70385514 Msa0268740:intron 25.0%
! ATATGTGTTTATGTAGCTAT+TGG - chr2_2:70385861-70385880 Msa0268740:intron 25.0%
! TAACTACTTTACAAGAAAGA+GGG - chr2_2:70385913-70385932 Msa0268740:intron 25.0%
! TGTAAATAAAAAACATCTCC+GGG + chr2_2:70386149-70386168 None:intergenic 25.0%
!! TTATTTACATTCTCGTCTTT+TGG - chr2_2:70386160-70386179 Msa0268740:intron 25.0%
! TAACTGAGAACTTAATTTAG+CGG + chr2_2:70386192-70386211 None:intergenic 25.0%
!! GTAATGGAAATTACATTAGT+AGG + chr2_2:70386281-70386300 None:intergenic 25.0%
! AATGTAATTTCCATTACAGA+TGG - chr2_2:70386284-70386303 Msa0268740:intron 25.0%
! TGATTCATTAGAAATTGATC+AGG - chr2_2:70386622-70386641 Msa0268740:intron 25.0%
! TAAATTTCTCGTTGAGTTAA+GGG - chr2_2:70386649-70386668 Msa0268740:intron 25.0%
!!! ATTACTTAGTCTGGCTTTTA+TGG - chr2_2:70383318-70383337 Msa0268740:intron 30.0%
CCGAATGAAGAATAAATTGT+AGG + chr2_2:70383543-70383562 None:intergenic 30.0%
AACTAGTATCTACTTCTAAG+AGG - chr2_2:70383670-70383689 Msa0268740:CDS 30.0%
!! TAAGAGGTATCGTTCTTATA+GGG - chr2_2:70383686-70383705 Msa0268740:CDS 30.0%
! CTTTTCTTTGCTTCATTTAC+TGG - chr2_2:70383971-70383990 Msa0268740:CDS 30.0%
ATAAATCTAAGTGTAGTGCT+AGG - chr2_2:70384045-70384064 Msa0268740:CDS 30.0%
! TCTCTATCAACCAAGAATTT+TGG - chr2_2:70384274-70384293 Msa0268740:CDS 30.0%
CAATTTCCGTATTAACATAG+TGG + chr2_2:70384361-70384380 None:intergenic 30.0%
CACTATGTTAATACGGAAAT+TGG - chr2_2:70384359-70384378 Msa0268740:CDS 30.0%
CGATGAAAAATAGGAAAAAC+AGG - chr2_2:70384435-70384454 Msa0268740:intron 30.0%
TCAATTCCGCATTGTATAAA+AGG + chr2_2:70384478-70384497 None:intergenic 30.0%
AGAAATAGAGAAAAGAGGAT+AGG - chr2_2:70384631-70384650 Msa0268740:CDS 30.0%
GCTCATTCGATAATAAAGAT+AGG - chr2_2:70384653-70384672 Msa0268740:CDS 30.0%
AGATAGGGAAATTTCCTATA+CGG - chr2_2:70384669-70384688 Msa0268740:CDS 30.0%
TGAAAGATTCATGTTTGGTT+CGG - chr2_2:70384717-70384736 Msa0268740:intron 30.0%
TCAAAATTCAGAAGAACTAC+GGG - chr2_2:70384836-70384855 Msa0268740:intron 30.0%
! CAATTTTTCTCGTTCTATCT+CGG + chr2_2:70384949-70384968 None:intergenic 30.0%
! CGATTCATTTTGAACAACAA+AGG - chr2_2:70385027-70385046 Msa0268740:CDS 30.0%
! GTTTTACAACAAGCATTACA+AGG - chr2_2:70385074-70385093 Msa0268740:CDS 30.0%
GGTGCTAATATTGATATGTT+TGG - chr2_2:70385152-70385171 Msa0268740:CDS 30.0%
TATATTGCTCAATACGTTCA+CGG + chr2_2:70385326-70385345 None:intergenic 30.0%
! TTATGGTCTTGATGAAGTAA+TGG - chr2_2:70385410-70385429 Msa0268740:intron 30.0%
TGAATTAGTCGAATTTGAAG+AGG - chr2_2:70385437-70385456 Msa0268740:intron 30.0%
GAATTAGTCGAATTTGAAGA+GGG - chr2_2:70385438-70385457 Msa0268740:intron 30.0%
! ATTGATTCTATGATCCCTAT+AGG - chr2_2:70385744-70385763 Msa0268740:intron 30.0%
TTGATTCTATGATCCCTATA+GGG - chr2_2:70385745-70385764 Msa0268740:intron 30.0%
AGATACAATTCTCAATCAAC+AGG - chr2_2:70385827-70385846 Msa0268740:intron 30.0%
GATACAATTCTCAATCAACA+GGG - chr2_2:70385828-70385847 Msa0268740:intron 30.0%
GTAACTACTTTACAAGAAAG+AGG - chr2_2:70385912-70385931 Msa0268740:intron 30.0%
AACTACTTTACAAGAAAGAG+GGG - chr2_2:70385914-70385933 Msa0268740:intron 30.0%
AATGGAGTACACTATTATAG+TGG - chr2_2:70385938-70385957 Msa0268740:intron 30.0%
TTCGTAATAGAAGAGACATT+TGG + chr2_2:70386103-70386122 None:intergenic 30.0%
GCTAAATTAAGTTCTCAGTT+AGG - chr2_2:70386191-70386210 Msa0268740:intron 30.0%
AAATATTTGGCCATCTGTAA+TGG + chr2_2:70386297-70386316 None:intergenic 30.0%
GATCGGCAGATAAAAATATT+TGG + chr2_2:70386310-70386329 None:intergenic 30.0%
TCAAATTAAAGCCATGAAAC+AGG - chr2_2:70386397-70386416 Msa0268740:intron 30.0%
GGTAGCTGGTAAATTAAAAT+TGG - chr2_2:70386418-70386437 Msa0268740:intron 30.0%
TAAAGCTACGCAAAATCAAT+TGG - chr2_2:70386496-70386515 Msa0268740:intron 30.0%
ACTATTTATACTGGAACGAA+TGG - chr2_2:70386593-70386612 Msa0268740:intron 30.0%
GTAAATTTCTCGTTGAGTTA+AGG - chr2_2:70386648-70386667 Msa0268740:intron 30.0%
GGGTACTTTATTACTTAGTC+TGG - chr2_2:70383309-70383328 Msa0268740:intron 35.0%
! AGCTTTAACTATTTATGGGC+TGG - chr2_2:70383342-70383361 Msa0268740:intron 35.0%
CATTGGACTAAATAAAGGGA+CGG + chr2_2:70383590-70383609 None:intergenic 35.0%
CGCTCATTGGACTAAATAAA+GGG + chr2_2:70383594-70383613 None:intergenic 35.0%
!! CTAAGAGGTATCGTTCTTAT+AGG - chr2_2:70383685-70383704 Msa0268740:CDS 35.0%
! ATGAAAAAAGTGCAGTTGGT+TGG + chr2_2:70384134-70384153 None:intergenic 35.0%
TTTAGTAAGAAGTCATTCGC+CGG + chr2_2:70384181-70384200 None:intergenic 35.0%
! TGGTAATGCTCCAAAATTCT+TGG + chr2_2:70384287-70384306 None:intergenic 35.0%
!!! AGAATTTTGGAGCATTACCA+TGG - chr2_2:70384287-70384306 Msa0268740:CDS 35.0%
!! AAACTGGTTAGCTTTAACCA+TGG + chr2_2:70384307-70384326 None:intergenic 35.0%
ATTGCGTCTAAACTTCAAAC+TGG + chr2_2:70384323-70384342 None:intergenic 35.0%
ATTCCGCATTGTATAAAAGG+AGG + chr2_2:70384475-70384494 None:intergenic 35.0%
! GAAAGATTCATGTTTGGTTC+GGG - chr2_2:70384718-70384737 Msa0268740:intron 35.0%
GATTAATCAAGTGCAACAGA+GGG - chr2_2:70385052-70385071 Msa0268740:CDS 35.0%
GAGTTACATTTACGTACGAT+CGG - chr2_2:70385131-70385150 Msa0268740:CDS 35.0%
ACTAATTTCATCTGCACGAA+TGG + chr2_2:70385295-70385314 None:intergenic 35.0%
! TGTAGGCATTGCTTTGAATT+TGG - chr2_2:70385464-70385483 Msa0268740:intron 35.0%
ACCATCAATAGGTTTAGCTA+GGG + chr2_2:70385619-70385638 None:intergenic 35.0%
AAATTTCAGCTTCGGAATCT+CGG - chr2_2:70385646-70385665 Msa0268740:intron 35.0%
GCCAGCGAGAATTAATTATT+GGG - chr2_2:70385772-70385791 Msa0268740:intron 35.0%
CCAGCGAGAATTAATTATTG+GGG - chr2_2:70385773-70385792 Msa0268740:intron 35.0%
TGATTAAAGTGTGACGTTCA+CGG + chr2_2:70386043-70386062 None:intergenic 35.0%
TTAAGTTCTCAGTTAGGTGA+AGG - chr2_2:70386197-70386216 Msa0268740:intron 35.0%
! GATTCCAGCATTGAATAGAT+CGG + chr2_2:70386327-70386346 None:intergenic 35.0%
AATCAGACCAGCTATTAATG+TGG - chr2_2:70386343-70386362 Msa0268740:intron 35.0%
ATCAGACCAGCTATTAATGT+GGG - chr2_2:70386344-70386363 Msa0268740:intron 35.0%
GAAATACCCACATTAATAGC+TGG + chr2_2:70386353-70386372 None:intergenic 35.0%
CTGAATAGCTTCCTTCAAAA+GGG + chr2_2:70386750-70386769 None:intergenic 35.0%
! GATGGAACTCTTTTTACTTC+AGG - chr2_2:70386775-70386794 Msa0268740:CDS 35.0%
!!! CTTATTTTGTCCTCTGCTTC+CGG + chr2_2:70383289-70383308 None:intergenic 40.0%
GGAAGCAGAGGACAAAATAA+GGG - chr2_2:70383288-70383307 Msa0268740:intron 40.0%
GAAGCAGAGGACAAAATAAG+GGG - chr2_2:70383289-70383308 Msa0268740:intron 40.0%
ATAGCAGCAATGAAAGTCCA+CGG + chr2_2:70383451-70383470 None:intergenic 40.0%
CTAAATAAAGGGACGGAAGA+AGG + chr2_2:70383583-70383602 None:intergenic 40.0%
GCGCTCATTGGACTAAATAA+AGG + chr2_2:70383595-70383614 None:intergenic 40.0%
TATGATCGCATCTCCTCTTA+TGG + chr2_2:70383933-70383952 None:intergenic 40.0%
CTAGAAAAACGTGCATGATC+CGG - chr2_2:70384159-70384178 Msa0268740:intron 40.0%
CAATGAATCGCGAAATGCTA+TGG + chr2_2:70384238-70384257 None:intergenic 40.0%
CATAGCATTTCGCGATTCAT+TGG - chr2_2:70384236-70384255 Msa0268740:intron 40.0%
! ACGCCTCCTTTTATACAATG+CGG - chr2_2:70384469-70384488 Msa0268740:intron 40.0%
TCTCACACTCAATTCCGTAT+AGG + chr2_2:70384686-70384705 None:intergenic 40.0%
CGTTTCTACTTTCCTTAAGC+GGG + chr2_2:70384895-70384914 None:intergenic 40.0%
CCGTTTCTACTTTCCTTAAG+CGG + chr2_2:70384896-70384915 None:intergenic 40.0%
CCGCTTAAGGAAAGTAGAAA+CGG - chr2_2:70384893-70384912 Msa0268740:intron 40.0%
AAGGAAAGTAGAAACGGAAG+CGG - chr2_2:70384899-70384918 Msa0268740:intron 40.0%
CGATTAATCAAGTGCAACAG+AGG - chr2_2:70385051-70385070 Msa0268740:CDS 40.0%
! ACAGGTACTGTACTTCAAGT+AGG - chr2_2:70385369-70385388 Msa0268740:CDS 40.0%
!! GAATTTGAAGAGGGTACTGT+AGG - chr2_2:70385447-70385466 Msa0268740:intron 40.0%
! GGTGTTGTATTAATGGGTGA+TGG - chr2_2:70385501-70385520 Msa0268740:intron 40.0%
!! TGATGGTTTGCTGATACAAG+AGG - chr2_2:70385518-70385537 Msa0268740:intron 40.0%
!! GATGGTTTGCTGATACAAGA+GGG - chr2_2:70385519-70385538 Msa0268740:intron 40.0%
ACCAGTAAGTGAGGGTTATT+TGG - chr2_2:70385578-70385597 Msa0268740:intron 40.0%
CCAGTAAGTGAGGGTTATTT+GGG - chr2_2:70385579-70385598 Msa0268740:intron 40.0%
GACCATCAATAGGTTTAGCT+AGG + chr2_2:70385620-70385639 None:intergenic 40.0%
ATTTCTCCTCGACCATCAAT+AGG + chr2_2:70385630-70385649 None:intergenic 40.0%
TCGAGGAGAAATTTCAGCTT+CGG - chr2_2:70385638-70385657 Msa0268740:intron 40.0%
GAACGTCTGGAAATAATACC+GGG + chr2_2:70385690-70385709 None:intergenic 40.0%
GGAACGTCTGGAAATAATAC+CGG + chr2_2:70385691-70385710 None:intergenic 40.0%
GGCCAGCGAGAATTAATTAT+TGG - chr2_2:70385771-70385790 Msa0268740:intron 40.0%
CCCCAATAATTAATTCTCGC+TGG + chr2_2:70385776-70385795 None:intergenic 40.0%
ATTATTGGGGACAGACAAAC+AGG - chr2_2:70385786-70385805 Msa0268740:intron 40.0%
!! TGGTCAAAAAGCATCTTCTG+TGG - chr2_2:70385881-70385900 Msa0268740:intron 40.0%
TTTACAAGAAAGAGGGGCAA+TGG - chr2_2:70385920-70385939 Msa0268740:intron 40.0%
AGCTGAAACATCTCCTGATT+GGG + chr2_2:70386252-70386271 None:intergenic 40.0%
AAGCTGAAACATCTCCTGAT+TGG + chr2_2:70386253-70386272 None:intergenic 40.0%
TTTACCAGCTACCTGTTTCA+TGG + chr2_2:70386411-70386430 None:intergenic 40.0%
ACGCAAAATCAATTGGCAAG+AGG - chr2_2:70386503-70386522 Msa0268740:intron 40.0%
TCTTCTACCAAGACATTCAC+TGG - chr2_2:70386713-70386732 Msa0268740:intron 40.0%
CTTCTACCAAGACATTCACT+GGG - chr2_2:70386714-70386733 Msa0268740:intron 40.0%
TTCTACCAAGACATTCACTG+GGG - chr2_2:70386715-70386734 Msa0268740:intron 40.0%
CCTGAATAGCTTCCTTCAAA+AGG + chr2_2:70386751-70386770 None:intergenic 40.0%
!! CCTTTTGAAGGAAGCTATTC+AGG - chr2_2:70386748-70386767 Msa0268740:intron 40.0%
ACAGAAGCAGCAGAAATCAG+TGG + chr2_2:70383169-70383188 None:intergenic 45.0%
CGGAAGCAGAGGACAAAATA+AGG - chr2_2:70383287-70383306 Msa0268740:intron 45.0%
!! TAAATAAAGGGGGCGCTCAT+TGG + chr2_2:70383607-70383626 None:intergenic 45.0%
GGTATCAAACCCGAAACTTC+CGG + chr2_2:70384004-70384023 None:intergenic 45.0%
AAGTAGAAACGGAAGCGGAT+CGG - chr2_2:70384904-70384923 Msa0268740:intron 45.0%
ACAAGCATTACAAGGAGCTC+TGG - chr2_2:70385082-70385101 Msa0268740:CDS 45.0%
CAAGCATTACAAGGAGCTCT+GGG - chr2_2:70385083-70385102 Msa0268740:CDS 45.0%
ACTGTACTTCAAGTAGGCGA+CGG - chr2_2:70385375-70385394 Msa0268740:CDS 45.0%
GACGGCATTGCTCGTATTTA+TGG - chr2_2:70385393-70385412 Msa0268740:intron 45.0%
GGTCTTGATGAAGTAATGGC+AGG - chr2_2:70385414-70385433 Msa0268740:intron 45.0%
GCTGATACAAGAGGGAAGTT+CGG - chr2_2:70385527-70385546 Msa0268740:intron 45.0%
GGAAGTTCGGTAAAAGCAAC+AGG - chr2_2:70385540-70385559 Msa0268740:intron 45.0%
TGCTCAGATACCAGTAAGTG+AGG - chr2_2:70385569-70385588 Msa0268740:intron 45.0%
GCTCAGATACCAGTAAGTGA+GGG - chr2_2:70385570-70385589 Msa0268740:intron 45.0%
CCCAAATAACCCTCACTTAC+TGG + chr2_2:70385582-70385601 None:intergenic 45.0%
GCCCTAGCTAAACCTATTGA+TGG - chr2_2:70385615-70385634 Msa0268740:intron 45.0%
! GCTAAACCTATTGATGGTCG+AGG - chr2_2:70385621-70385640 Msa0268740:intron 45.0%
TCTGGAAATAATACCGGGAG+CGG + chr2_2:70385685-70385704 None:intergenic 45.0%
CGTTTGAAGAGGCTCATACA+CGG + chr2_2:70385712-70385731 None:intergenic 45.0%
CGTGTATGAGCCTCTTCAAA+CGG - chr2_2:70385710-70385729 Msa0268740:intron 45.0%
GTGTATGAGCCTCTTCAAAC+GGG - chr2_2:70385711-70385730 Msa0268740:intron 45.0%
GCAATAAGTCCCGTTTGAAG+AGG + chr2_2:70385723-70385742 None:intergenic 45.0%
!! GCGAGGTATTGTAATGTAGC+TGG + chr2_2:70385981-70386000 None:intergenic 45.0%
CAATACCTCGCTCCTTATAC+AGG - chr2_2:70385990-70386009 Msa0268740:intron 45.0%
TAAGCCTGTGCTTGTTTGGA+GGG + chr2_2:70386077-70386096 None:intergenic 45.0%
ATAAGCCTGTGCTTGTTTGG+AGG + chr2_2:70386078-70386097 None:intergenic 45.0%
CTTCTATTACGAAGACCACC+AGG - chr2_2:70386110-70386129 Msa0268740:intron 45.0%
CCTGATTGGGTCTCAACTAT+TGG + chr2_2:70386239-70386258 None:intergenic 45.0%
CCAATAGTTGAGACCCAATC+AGG - chr2_2:70386236-70386255 Msa0268740:intron 45.0%
TCTGCCGATCTATTCAATGC+TGG - chr2_2:70386320-70386339 Msa0268740:intron 45.0%
GGTATTTCCGTTTCCAGAGT+TGG - chr2_2:70386365-70386384 Msa0268740:intron 45.0%
TTCCGTTTCCAGAGTTGGAT+CGG - chr2_2:70386370-70386389 Msa0268740:intron 45.0%
AAAGCCATGAAACAGGTAGC+TGG - chr2_2:70386404-70386423 Msa0268740:intron 45.0%
ATCTGTTCTTCCACAGTGAG+AGG + chr2_2:70386569-70386588 None:intergenic 45.0%
GGAAGCTATTCAGGAACAGA+TGG - chr2_2:70386757-70386776 Msa0268740:CDS 45.0%
CTGCTTCTGTTATCGCTGCT+GGG - chr2_2:70383179-70383198 Msa0268740:intron 50.0%
TTCTGTTATCGCTGCTGGGT+TGG - chr2_2:70383183-70383202 Msa0268740:intron 50.0%
TCCAATAGAAGCAAGCCCGA+CGG + chr2_2:70383209-70383228 None:intergenic 50.0%
GCTTCTATTGGACCTGGAGT+TGG - chr2_2:70383217-70383236 Msa0268740:intron 50.0%
! ATTGGACCTGGAGTTGGTCA+AGG - chr2_2:70383223-70383242 Msa0268740:intron 50.0%
TTGGTCAAGGTACAGCTGCA+GGG - chr2_2:70383236-70383255 Msa0268740:intron 50.0%
TTCATTTACTGGCCATCCGC+CGG - chr2_2:70383982-70384001 Msa0268740:CDS 50.0%
ATCAAACCCGAAACTTCCGG+CGG + chr2_2:70384001-70384020 None:intergenic 50.0%
GGCTTTCTCCAGCTGTTCAA+CGG + chr2_2:70384868-70384887 None:intergenic 50.0%
TTGAACAGCTGGAGAAAGCC+CGG - chr2_2:70384868-70384887 Msa0268740:intron 50.0%
TTAATCGAATCTCCCGCTCC+CGG - chr2_2:70385669-70385688 Msa0268740:intron 50.0%
CTGGAAATAATACCGGGAGC+GGG + chr2_2:70385684-70385703 None:intergenic 50.0%
TCTATGATCCCTATAGGGCG+TGG - chr2_2:70385750-70385769 Msa0268740:intron 50.0%
AGCATCTTCTGTGGCTCAAG+TGG - chr2_2:70385890-70385909 Msa0268740:intron 50.0%
TCCTTATACAGGTGCAGCTC+TGG - chr2_2:70386001-70386020 Msa0268740:intron 50.0%
GCGATAAGCCTGTGCTTGTT+TGG + chr2_2:70386081-70386100 None:intergenic 50.0%
CACAGTGAGAGGAGCTGATT+GGG + chr2_2:70386558-70386577 None:intergenic 50.0%
TGCTTCCCCAGTGAATGTCT+TGG + chr2_2:70386723-70386742 None:intergenic 50.0%
! GGAAGCAGAAGCCCTTTTGA+AGG - chr2_2:70386736-70386755 Msa0268740:intron 50.0%
GCTGCTTCTGTTATCGCTGC+TGG - chr2_2:70383178-70383197 Msa0268740:intron 55.0%
! GGGCTTGCTTCTATTGGACC+TGG - chr2_2:70383211-70383230 Msa0268740:intron 55.0%
GCTGTACCTTGACCAACTCC+AGG + chr2_2:70383232-70383251 None:intergenic 55.0%
GTTGGTCAAGGTACAGCTGC+AGG - chr2_2:70383235-70383254 Msa0268740:intron 55.0%
CTGCAGGGCAAGCTGTAGAA+GGG - chr2_2:70383251-70383270 Msa0268740:intron 55.0%
AGAAGGGATTGCGCGACAAC+CGG - chr2_2:70383267-70383286 Msa0268740:intron 55.0%
TGAACAGCTGGAGAAAGCCC+GGG - chr2_2:70384869-70384888 Msa0268740:intron 55.0%
TACTTTCCTTAAGCGGGCCC+GGG + chr2_2:70384889-70384908 None:intergenic 55.0%
CTACTTTCCTTAAGCGGGCC+CGG + chr2_2:70384890-70384909 None:intergenic 55.0%
! GCGGATCGGTTTCGAGTGAA+TGG - chr2_2:70384918-70384937 Msa0268740:intron 55.0%
AGGCTCATACACGGAACGTC+TGG + chr2_2:70385703-70385722 None:intergenic 55.0%
CTGCACCTGTATAAGGAGCG+AGG + chr2_2:70385998-70386017 None:intergenic 55.0%
GCCAGAGCTGCACCTGTATA+AGG + chr2_2:70386005-70386024 None:intergenic 55.0%
CGATCCCTCCAAACAAGCAC+AGG - chr2_2:70386070-70386089 Msa0268740:intron 55.0%
! CGCCGATCCAACTCTGGAAA+CGG + chr2_2:70386375-70386394 None:intergenic 55.0%
CGTTTCCAGAGTTGGATCGG+CGG - chr2_2:70386373-70386392 Msa0268740:intron 55.0%
CCACAGTGAGAGGAGCTGAT+TGG + chr2_2:70386559-70386578 None:intergenic 55.0%
CCAATCAGCTCCTCTCACTG+TGG - chr2_2:70386556-70386575 Msa0268740:intron 55.0%
! GCCGTCGGGCTTGCTTCTAT+TGG - chr2_2:70383205-70383224 Msa0268740:intron 60.0%
GCTGCAGGGCAAGCTGTAGA+AGG - chr2_2:70383250-70383269 Msa0268740:intron 60.0%
TGGCCATCCGCCGGAAGTTT+CGG - chr2_2:70383991-70384010 Msa0268740:CDS 60.0%
AACCCGAAACTTCCGGCGGA+TGG + chr2_2:70383997-70384016 None:intergenic 60.0%
GGAAGCAGCCGTTGAACAGC+TGG - chr2_2:70384857-70384876 Msa0268740:intron 60.0%
TTGAGCCGCCGATCCAACTC+TGG + chr2_2:70386381-70386400 None:intergenic 60.0%
!! ATCGCTGCTGGGTTGGCCGT+CGG - chr2_2:70383190-70383209 Msa0268740:intron 65.0%
TGCGCGACAACCGGAAGCAG+AGG - chr2_2:70383276-70383295 Msa0268740:intron 65.0%
GGCCATCCGCCGGAAGTTTC+GGG - chr2_2:70383992-70384011 Msa0268740:CDS 65.0%
AGAAAGCCCGGGCCCGCTTA+AGG - chr2_2:70384880-70384899 Msa0268740:intron 65.0%
CTCGCTGGCCACGCCCTATA+GGG + chr2_2:70385761-70385780 None:intergenic 65.0%
TCTCGCTGGCCACGCCCTAT+AGG + chr2_2:70385762-70385781 None:intergenic 65.0%
GGATACGCTTCGCGACCTGG+TGG + chr2_2:70386128-70386147 None:intergenic 65.0%
CCAGGTCGCGAAGCGTATCC+CGG - chr2_2:70386128-70386147 Msa0268740:intron 65.0%
!! TCGCTGCTGGGTTGGCCGTC+GGG - chr2_2:70383191-70383210 Msa0268740:intron 70.0%
CCGGGATACGCTTCGCGACC+TGG + chr2_2:70386131-70386150 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 70383160 70386988 70383160 ID=Msa0268740;Name=Msa0268740
chr2_2 mRNA 70383160 70386988 70383160 ID=Msa0268740-mRNA-1;Parent=Msa0268740;Name=Msa0268740-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|0.9|0|0|10|0|556
chr2_2 exon 70386749 70386988 70386749 ID=Msa0268740-mRNA-1:exon:22658;Parent=Msa0268740-mRNA-1
chr2_2 exon 70385209 70385395 70385209 ID=Msa0268740-mRNA-1:exon:22657;Parent=Msa0268740-mRNA-1
chr2_2 exon 70384996 70385193 70384996 ID=Msa0268740-mRNA-1:exon:22656;Parent=Msa0268740-mRNA-1
chr2_2 exon 70384743 70384844 70384743 ID=Msa0268740-mRNA-1:exon:22655;Parent=Msa0268740-mRNA-1
chr2_2 exon 70384481 70384712 70384481 ID=Msa0268740-mRNA-1:exon:22654;Parent=Msa0268740-mRNA-1
chr2_2 exon 70384266 70384444 70384266 ID=Msa0268740-mRNA-1:exon:22653;Parent=Msa0268740-mRNA-1
chr2_2 exon 70383936 70384136 70383936 ID=Msa0268740-mRNA-1:exon:22652;Parent=Msa0268740-mRNA-1
chr2_2 exon 70383766 70383929 70383766 ID=Msa0268740-mRNA-1:exon:22651;Parent=Msa0268740-mRNA-1
chr2_2 exon 70383574 70383729 70383574 ID=Msa0268740-mRNA-1:exon:22650;Parent=Msa0268740-mRNA-1
chr2_2 exon 70383160 70383171 70383160 ID=Msa0268740-mRNA-1:exon:22649;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70386749 70386988 70386749 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70385209 70385395 70385209 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70384996 70385193 70384996 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70384743 70384844 70384743 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70384481 70384712 70384481 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70384266 70384444 70384266 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70383936 70384136 70383936 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70383766 70383929 70383766 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70383574 70383729 70383574 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
chr2_2 CDS 70383160 70383171 70383160 ID=Msa0268740-mRNA-1:cds;Parent=Msa0268740-mRNA-1
Gene Sequence

>Msa0268740

ATGGATCCACTGATTTCTGCTGCTTCTGTTATCGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGAGTTGGTCAAGGTACAGCTGCAGGGCAAGCTGTAGAAGGGATTGCGCGACAACCGGAAGCAGAGGACAAAATAAGGGGTACTTTATTACTTAGTCTGGCTTTTATGGAAGCTTTAACTATTTATGGGCTGGTTGTAGCATTAGCACTTTTATTTGCCAATCCTTTTACATTTTTAAATAAATGCAAAGAGAATCTACTTTCATTAAGTGATTTATTAGATAATCGAAAACAGAGAATCTTGAGAACTATTCAAAATTCAGAAGAACTACGGGAAGCAGCCGTTGAACAGCTGGAGAAAGCCCGGGCCCGCTTAAGGAAAGTAGAAACGGAAGCGGATCGGTTTCGAGTGAATGAACGAGAAAAATTGAATTTAATTAATTCAATTTATACAACTTTGGAACAATTCGAAAATTACAAAAATGAAACGATTCATTTTGAACAACAAAGGGCGATTAATCAAGTGCAACAGAGGGTTTTACAACAAGCATTACAAGGAGCTCTGGGAACTCTGAATAGTTGCTTAAACAACGAGTTACATTTACGTACGATCGATGAAATTAGTAAAATTATCCGTGAACGTATTGAGCAATATAATACCGAAGTAAAAATTGTAAATACAGGTACTGTACTTCAAGTAGGCGACGGCATTGCTCGTGAATTAGTCGAATTTGAAGAGGGTACTGTAGGCATTGCTTTGAATTTGGAATCCAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGCTGATACAAGAGGGAAGTTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGGTTATTTGGGTCGTGTTGTAAATGCCCTAGCTAAACCTATTGATGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGACGTTCCGTGTATGAGCCTCTTCAAACGGGACTTATTGCTATTGATTCTATGATCCCTATAGGGCGTGGCCAGCGAGAATTAATTATTGGGGACAGACAAACAGGTAAAACAGCAGTAGCAACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATCATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCAGGTCGCGAAGCGTATCCCGGAGATGTTTTTTATTTACATTCTCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCAGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTTTTATCTGCCGATCTATTCAATGCTGGAATCAGACCAGCTATTAATGTGGGTATTTCCGTTTCCAGAGTAGCTGGTAAATTAAAATTGGAATTGGCACAATTCGCAGAATTAGAAGCTTTTGCACAATTCGCTTCTGATCTCGATAAAGCTACGCAAAATCAATTGGCAAGAGGTCAACGATTGCGCGAGTTGCTTAAACAATCCCAATCAGCTCCTCTCACTATACGAATATAA

Protein sequence

>Msa0268740

MDPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTLLLSLAFMEALTIYGLVVALALLFANPFTFLNKCKENLLSLSDLLDNRKQRILRTIQNSEELREAAVEQLEKARARLRKVETEADRFRVNEREKLNLINSIYTTLEQFENYKNETIHFEQQRAINQVQQRVLQQALQGALGTLNSCLNNELHLRTIDEISKIIRERIEQYNTEVKIVNTGTVLQVGDGIARELVEFEEGTVGIALNLESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISASESRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTIRI*