AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1086380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1086380 MtrunA17_Chr4g0015651 99.468 376 2 0 167 542 7 382 0.0 752
Msa1086380 MtrunA17_Chr4g0016741 99.468 376 2 0 167 542 7 382 0.0 752
Msa1086380 MtrunA17_CPg0492941 99.468 376 2 0 167 542 7 382 0.0 752
Msa1086380 MtrunA17_MTg0490471 65.274 383 124 1 168 541 9 391 1.56e-174 502
Msa1086380 MtrunA17_Chr2g0286451 91.803 183 15 0 239 421 7 189 9.91e-114 335
Msa1086380 MtrunA17_Chr2g0278821 91.975 162 13 0 381 542 2 163 2.61e-103 312
Msa1086380 MtrunA17_Chr4g0040631 96.581 117 4 0 167 283 7 123 9.78e-70 220
Msa1086380 MtrunA17_CPg0492961 70.552 163 39 4 10 166 8 167 9.52e-65 209
Msa1086380 MtrunA17_Chr4g0061471 89.333 75 8 0 260 334 1 75 4.69e-39 137
Msa1086380 MtrunA17_Chr1g0211291 30.363 303 191 5 247 531 84 384 3.98e-29 120
Msa1086380 MtrunA17_Chr7g0250051 29.781 319 205 5 230 531 66 382 1.11e-28 119
Msa1086380 MtrunA17_Chr5g0413061 52.941 85 26 2 355 438 13 84 1.19e-19 83.6
Msa1086380 MtrunA17_Chr4g0000341 28.679 265 163 8 286 532 210 466 1.36e-16 83.2
Msa1086380 MtrunA17_Chr1g0208751 24.633 341 226 7 214 527 98 434 3.07e-15 78.6
Msa1086380 MtrunA17_Chr1g0208761 24.340 341 227 7 214 527 101 437 4.40e-15 78.2
Msa1086380 MtrunA17_Chr4g0016371 26.552 290 198 6 239 519 44 327 1.42e-14 76.3
Msa1086380 MtrunA17_CPg0493401 26.552 290 198 6 239 519 83 366 2.55e-14 75.5
Msa1086380 MtrunA17_Chr7g0229391 26.207 290 199 5 239 519 83 366 3.67e-14 75.1
Msa1086380 MtrunA17_Chr3g0090971 26.552 290 198 6 239 519 83 366 1.00e-13 73.6
Msa1086380 MtrunA17_Chr7g0276011 26.872 227 155 5 239 456 83 307 3.46e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1086380 ATCG00120.1 95.745 376 16 0 167 542 7 382 0.0 729
Msa1086380 ATMG01190.1 61.880 383 137 1 168 541 9 391 2.76e-167 484
Msa1086380 AT2G07698.1 55.224 469 195 3 88 541 193 661 9.82e-166 489
Msa1086380 ATCG00130.1 57.927 164 61 3 12 167 7 170 2.58e-51 174
Msa1086380 AT4G38510.5 30.464 302 191 5 247 531 90 389 7.31e-30 123
Msa1086380 AT4G38510.1 30.464 302 191 5 247 531 83 382 7.41e-30 123
Msa1086380 AT4G38510.3 30.464 302 191 5 247 531 83 382 7.41e-30 123
Msa1086380 AT4G38510.4 30.464 302 191 5 247 531 83 382 7.41e-30 123
Msa1086380 AT4G38510.2 30.464 302 191 5 247 531 83 382 7.41e-30 123
Msa1086380 AT1G76030.1 30.464 302 191 5 247 531 82 381 7.35e-29 120
Msa1086380 AT1G20260.1 29.375 320 206 5 230 531 65 382 4.34e-28 117
Msa1086380 AT5G08690.1 26.370 292 201 4 246 527 147 434 1.40e-17 86.3
Msa1086380 AT5G08670.1 26.370 292 201 4 246 527 147 434 1.86e-17 85.9
Msa1086380 AT5G08680.1 26.370 292 201 4 246 527 150 437 3.03e-17 85.5
Msa1086380 AT1G78900.1 28.679 265 163 8 286 532 209 465 2.20e-16 82.8
Msa1086380 AT1G78900.2 28.679 265 163 8 286 532 209 465 2.20e-16 82.8
Msa1086380 ATCG00480.1 24.476 286 203 4 243 519 85 366 1.12e-12 70.9

Find 139 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAGTAAGTGAGGGTTATT+TGG 0.166311 7_2:-87358558 Msa1086380:CDS
TGTAGGCATTGCTTTGAATT+TGG 0.201612 7_2:-87358672 Msa1086380:CDS
GACGGCATTGCTCGTATTTA+TGG 0.205588 7_2:-87358743 Msa1086380:CDS
CCCAAATAACCCTCACTTAC+TGG 0.241036 7_2:+87358557 None:intergenic
TTATTTACATTCTCGTCTTT+TGG 0.245014 7_2:-87357976 Msa1086380:CDS
AAATGTTGGTGTTGTATTAA+TGG 0.258988 7_2:-87358642 Msa1086380:CDS
GGCCAGCGAGAATTAATTAT+TGG 0.267680 7_2:-87358365 Msa1086380:CDS
CGGAAGCAGAGGACAAAATA+AGG 0.270738 7_2:-87360836 Msa1086380:CDS
TCTCGCTGGCCACGCCCTAT+AGG 0.298734 7_2:+87358377 None:intergenic
GCCGTCGGGCTTGCTTCTAT+TGG 0.311843 7_2:-87360919 Msa1086380:CDS
TTTACCAGCTACCTGTTTCA+TGG 0.316781 7_2:+87357728 None:intergenic
GCCAGAGCTGCACCTGTATA+AGG 0.317929 7_2:+87358134 None:intergenic
CTCGCTGGCCACGCCCTATA+GGG 0.318797 7_2:+87358378 None:intergenic
CTACTTTCCTTAAGCGGGCC+CGG 0.340021 7_2:+87359247 None:intergenic
ATTGATTCTATGATCCCTAT+AGG 0.359827 7_2:-87358392 Msa1086380:CDS
GCTGCAGGGCAAGCTGTAGA+AGG 0.363265 7_2:-87360873 Msa1086380:CDS
GCGATAAGCCTGTGCTTGTT+TGG 0.364708 7_2:+87358058 None:intergenic
GCCAGCGAGAATTAATTATT+GGG 0.365780 7_2:-87358364 Msa1086380:CDS
CCTGATTGGGTCTCAACTAT+TGG 0.368964 7_2:+87357900 None:intergenic
TAATTCAATTTATACAACTT+TGG 0.388293 7_2:-87359158 Msa1086380:CDS
ATTTCTCCTCGACCATCAAT+AGG 0.391542 7_2:+87358509 None:intergenic
AATGTTGGTGTTGTATTAAT+GGG 0.391664 7_2:-87358641 Msa1086380:CDS
TCCTTATACAGGTGCAGCTC+TGG 0.392160 7_2:-87358135 Msa1086380:CDS
GCCCTAGCTAAACCTATTGA+TGG 0.393369 7_2:-87358521 Msa1086380:CDS
CCAATAGTTGAGACCCAATC+AGG 0.395916 7_2:-87357900 Msa1086380:CDS
AGATACAATTCTCAATCAAC+AGG 0.401486 7_2:-87358309 Msa1086380:CDS
TCAAATTAAAGCCATGAAAC+AGG 0.408465 7_2:-87357739 Msa1086380:CDS
CCGGGATACGCTTCGCGACC+TGG 0.409309 7_2:+87358008 None:intergenic
AAGCTGAAACATCTCCTGAT+TGG 0.409535 7_2:+87357886 None:intergenic
AGAAAGCCCGGGCCCGCTTA+AGG 0.414131 7_2:-87359254 Msa1086380:CDS
GCTAAATTAAGTTCTCAGTT+AGG 0.415873 7_2:-87357945 Msa1086380:CDS
GCTTCTATTGGACCTGGAGT+TGG 0.416315 7_2:-87360907 Msa1086380:CDS
CCAGTAAGTGAGGGTTATTT+GGG 0.424091 7_2:-87358557 Msa1086380:CDS
ATTATTGGGGACAGACAAAC+AGG 0.427629 7_2:-87358350 Msa1086380:CDS
AAATATTTGGCCATCTGTAA+TGG 0.434228 7_2:+87357842 None:intergenic
TTGATTCTATGATCCCTATA+GGG 0.437674 7_2:-87358391 Msa1086380:CDS
AGGCTCATACACGGAACGTC+TGG 0.440884 7_2:+87358436 None:intergenic
GGTATTTCCGTTTCCAGAGT+TGG 0.443512 7_2:-87357771 Msa1086380:CDS
GTAATGGAAATTACATTAGT+AGG 0.444650 7_2:+87357858 None:intergenic
CGTTTCTACTTTCCTTAAGC+GGG 0.444690 7_2:+87359242 None:intergenic
ATATGTGTTTATGTAGCTAT+TGG 0.445393 7_2:-87358275 Msa1086380:CDS
TTATCGCTGCGGTTGGCCGT+CGG 0.446585 7_2:-87360934 Msa1086380:CDS
GCGGATCGGTTTCGAGTGAA+TGG 0.446998 7_2:-87359216 Msa1086380:intron
TTCAAAATTCAGAAGAACTA+CGG 0.449969 7_2:-87359299 Msa1086380:CDS
GGAAGCAGCCGTTGAACAGC+TGG 0.450450 7_2:-87359277 Msa1086380:CDS
ACAAGCATTACAAGGAGCTC+TGG 0.452163 7_2:-87359053 Msa1086380:CDS
TTCGTAATAGAAGAGACATT+TGG 0.452176 7_2:+87358036 None:intergenic
AGCTGAAACATCTCCTGATT+GGG 0.452206 7_2:+87357887 None:intergenic
GGAAGTTCGGTAAAAGCAAC+AGG 0.457398 7_2:-87358596 Msa1086380:CDS
TACTTTCCTTAAGCGGGCCC+GGG 0.461743 7_2:+87359248 None:intergenic
ATAAGCCTGTGCTTGTTTGG+AGG 0.462375 7_2:+87358061 None:intergenic
CAATACCTCGCTCCTTATAC+AGG 0.462710 7_2:-87358146 Msa1086380:CDS
CGTGTATGAGCCTCTTCAAA+CGG 0.465005 7_2:-87358426 Msa1086380:CDS
TTGAACAGCTGGAGAAAGCC+CGG 0.472109 7_2:-87359266 Msa1086380:CDS
TATCGCTGCGGTTGGCCGTC+GGG 0.472587 7_2:-87360933 Msa1086380:CDS
GGAAGCAGAGGACAAAATAA+GGG 0.473459 7_2:-87360835 Msa1086380:CDS
GAATATGGAGAAACTTATCA+TGG 0.473472 7_2:-87360981 Msa1086380:intron
AGAAGGGATTGCGCGACAAC+CGG 0.475077 7_2:-87360856 Msa1086380:CDS
TCGAGGAGAAATTTCAGCTT+CGG 0.476522 7_2:-87358498 Msa1086380:CDS
TTGGTCAAGGTACAAGCTGC+AGG 0.477590 7_2:-87360888 Msa1086380:CDS
CCAGGTCGCGAAGCGTATCC+CGG 0.478786 7_2:-87358008 Msa1086380:CDS
GGGCTTGCTTCTATTGGACC+TGG 0.481695 7_2:-87360913 Msa1086380:CDS
TAACTGAGAACTTAATTTAG+CGG 0.485288 7_2:+87357947 None:intergenic
CGCCGATCCAACTCTGGAAA+CGG 0.485937 7_2:+87357764 None:intergenic
TATATTGCTCAATACGTTCA+CGG 0.487151 7_2:+87358813 None:intergenic
AAATTTCAGCTTCGGAATCT+CGG 0.492871 7_2:-87358490 Msa1086380:CDS
GCGAGGTATTGTAATGTAGC+TGG 0.497569 7_2:+87358158 None:intergenic
TTCCGTTTCCAGAGTTGGAT+CGG 0.499691 7_2:-87357766 Msa1086380:CDS
GGTGTTGTATTAATGGGTGA+TGG 0.501676 7_2:-87358635 Msa1086380:CDS
GGCTTTCTCCAGCTGTTCAA+CGG 0.504402 7_2:+87359269 None:intergenic
TCTGCCGATCTATTCAATGC+TGG 0.509351 7_2:-87357816 Msa1086380:CDS
GCTGATACAAGAGGGAAGTT+CGG 0.510716 7_2:-87358609 Msa1086380:CDS
TCAAAATTCAGAAGAACTAC+GGG 0.510719 7_2:-87359298 Msa1086380:CDS
GTGTATGAGCCTCTTCAAAC+GGG 0.511475 7_2:-87358425 Msa1086380:CDS
GTAACTACTTTACAAGAAAG+AGG 0.516144 7_2:-87358224 Msa1086380:CDS
TGATTAAAGTGTGACGTTCA+CGG 0.516487 7_2:+87358096 None:intergenic
CCGTTTCTACTTTCCTTAAG+CGG 0.521089 7_2:+87359241 None:intergenic
TTGAGCCGCCGATCCAACTC+TGG 0.524235 7_2:+87357758 None:intergenic
TAAGCCTGTGCTTGTTTGGA+GGG 0.526272 7_2:+87358062 None:intergenic
TTAATCGAATCTCCCGCTCC+CGG 0.527597 7_2:-87358467 Msa1086380:CDS
GAAATACCCACATTAATAGC+TGG 0.538501 7_2:+87357786 None:intergenic
TTATGGTCTTGATGAAGTAA+TGG 0.538951 7_2:-87358726 Msa1086380:CDS
CCCCAATAATTAATTCTCGC+TGG 0.539649 7_2:+87358363 None:intergenic
GGAACGTCTGGAAATAATAC+CGG 0.540181 7_2:+87358448 None:intergenic
TTTACAAGAAAGAGGGGCAA+TGG 0.541624 7_2:-87358216 Msa1086380:CDS
GACCATCAATAGGTTTAGCT+AGG 0.542268 7_2:+87358519 None:intergenic
ATTGGACCTGGAGTTGGTCA+AGG 0.543278 7_2:-87360901 Msa1086380:CDS
GCTTCTGTTATCGCTGCGGT+TGG 0.543868 7_2:-87360941 Msa1086380:CDS
AATGGAGTACACTATTATAG+TGG 0.544433 7_2:-87358198 Msa1086380:CDS
AGCATCTTCTGTGGCTCAAG+TGG 0.546125 7_2:-87358246 Msa1086380:CDS
TGCGCGACAACCGGAAGCAG+AGG 0.554171 7_2:-87360847 Msa1086380:CDS
AATGTAATTTCCATTACAGA+TGG 0.557336 7_2:-87357852 Msa1086380:CDS
AAAGCCATGAAACAGGTAGC+TGG 0.558354 7_2:-87357732 Msa1086380:CDS
TTAAGTTCTCAGTTAGGTGA+AGG 0.563580 7_2:-87357939 Msa1086380:CDS
CTGGAAATAATACCGGGAGC+GGG 0.565141 7_2:+87358455 None:intergenic
CAAGCATTACAAGGAGCTCT+GGG 0.568354 7_2:-87359052 Msa1086380:CDS
AAGTAGAAACGGAAGCGGAT+CGG 0.570689 7_2:-87359230 Msa1086380:CDS
CCGCTTAAGGAAAGTAGAAA+CGG 0.573518 7_2:-87359241 Msa1086380:CDS
CGATCCCTCCAAACAAGCAC+AGG 0.574680 7_2:-87358066 Msa1086380:CDS
TGAACAGCTGGAGAAAGCCC+GGG 0.575165 7_2:-87359265 Msa1086380:CDS
TGCTCAGATACCAGTAAGTG+AGG 0.577261 7_2:-87358567 Msa1086380:CDS
TAACTACTTTACAAGAAAGA+GGG 0.578222 7_2:-87358223 Msa1086380:CDS
TGAATTAGTCGAATTTGAAG+AGG 0.580561 7_2:-87358699 Msa1086380:CDS
CTGCAGGGCAAGCTGTAGAA+GGG 0.582070 7_2:-87360872 Msa1086380:CDS
TCTGGAAATAATACCGGGAG+CGG 0.583040 7_2:+87358454 None:intergenic
GCAATAAGTCCCGTTTGAAG+AGG 0.589598 7_2:+87358416 None:intergenic
ACAGGTACTGTACTTCAAGT+AGG 0.592569 7_2:-87358767 Msa1086380:CDS
GAATTTGAAGAGGGTACTGT+AGG 0.593991 7_2:-87358689 Msa1086380:CDS
CTTGTACCTTGACCAACTCC+AGG 0.595440 7_2:+87360895 None:intergenic
CGATTAATCAAGTGCAACAG+AGG 0.596922 7_2:-87359084 Msa1086380:CDS
CTTCTATTACGAAGACCACC+AGG 0.597315 7_2:-87358026 Msa1086380:CDS
ACCATCAATAGGTTTAGCTA+GGG 0.601516 7_2:+87358520 None:intergenic
ATCAGACCAGCTATTAATGT+GGG 0.604091 7_2:-87357792 Msa1086380:CDS
GAGTTACATTTACGTACGAT+CGG 0.617220 7_2:-87359004 Msa1086380:intron
GAATTAGTCGAATTTGAAGA+GGG 0.619600 7_2:-87358698 Msa1086380:CDS
GCTAAACCTATTGATGGTCG+AGG 0.620970 7_2:-87358515 Msa1086380:CDS
GAACGTCTGGAAATAATACC+GGG 0.622363 7_2:+87358449 None:intergenic
AAGGAAAGTAGAAACGGAAG+CGG 0.622485 7_2:-87359235 Msa1086380:CDS
AATCAGACCAGCTATTAATG+TGG 0.625394 7_2:-87357793 Msa1086380:CDS
GATTCCAGCATTGAATAGAT+CGG 0.626418 7_2:+87357812 None:intergenic
TGCTGCTTCTGTTATCGCTG+CGG 0.627790 7_2:-87360945 Msa1086380:CDS
TCTATGATCCCTATAGGGCG+TGG 0.628110 7_2:-87358386 Msa1086380:CDS
AACTACTTTACAAGAAAGAG+GGG 0.635218 7_2:-87358222 Msa1086380:CDS
CCAGCGAGAATTAATTATTG+GGG 0.636830 7_2:-87358363 Msa1086380:CDS
TCCAATAGAAGCAAGCCCGA+CGG 0.638086 7_2:+87360918 None:intergenic
GGTCTTGATGAAGTAATGGC+AGG 0.640111 7_2:-87358722 Msa1086380:CDS
ACAGAAGCAGCAGAAATCAG+TGG 0.640161 7_2:+87360956 None:intergenic
GATTAATCAAGTGCAACAGA+GGG 0.644246 7_2:-87359083 Msa1086380:CDS
TGGTCAAGGTACAAGCTGCA+GGG 0.645007 7_2:-87360887 Msa1086380:CDS
CGTTTGAAGAGGCTCATACA+CGG 0.655862 7_2:+87358427 None:intergenic
GAAGCAGAGGACAAAATAAG+GGG 0.658398 7_2:-87360834 Msa1086380:intron
CGTTTCCAGAGTTGGATCGG+CGG 0.663289 7_2:-87357763 Msa1086380:CDS
GATGGTTTGCTGATACAAGA+GGG 0.671964 7_2:-87358617 Msa1086380:CDS
GCTCAGATACCAGTAAGTGA+GGG 0.673181 7_2:-87358566 Msa1086380:CDS
TGATGGTTTGCTGATACAAG+AGG 0.676056 7_2:-87358618 Msa1086380:CDS
CTGCACCTGTATAAGGAGCG+AGG 0.679934 7_2:+87358141 None:intergenic
ACTGTACTTCAAGTAGGCGA+CGG 0.682410 7_2:-87358761 Msa1086380:CDS
GGATACGCTTCGCGACCTGG+TGG 0.699302 7_2:+87358011 None:intergenic
GATACAATTCTCAATCAACA+GGG 0.744742 7_2:-87358308 Msa1086380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTTTCTTTATTTTATT+TGG - chr7_2:87358107-87358126 Msa1086380:CDS 10.0%
!!! TTTTTTAAAGATTAAACAAA+AGG + chr7_2:87358383-87358402 None:intergenic 10.0%
!! TCAATTCTAAATTAAATAAA+GGG + chr7_2:87358601-87358620 None:intergenic 10.0%
!! TTCAATTCTAAATTAAATAA+AGG + chr7_2:87358602-87358621 None:intergenic 10.0%
!! ATAATTAAGTCATAATTTCT+TGG - chr7_2:87358065-87358084 Msa1086380:CDS 15.0%
!!! TCTTTATTTTATTTGGAATA+TGG - chr7_2:87358114-87358133 Msa1086380:CDS 15.0%
!! AATTCTAAATTAAATAAAGG+GGG + chr7_2:87358599-87358618 None:intergenic 15.0%
!! CAATTCTAAATTAAATAAAG+GGG + chr7_2:87358600-87358619 None:intergenic 15.0%
!! AATCAAAAAATCAAAAAACT+GGG - chr7_2:87358863-87358882 Msa1086380:intron 15.0%
!!! TGTATTAATTTTTTTGGAAA+GGG - chr7_2:87359046-87359065 Msa1086380:CDS 15.0%
!! ATAAATTAATCAGAATTCTT+TGG - chr7_2:87359485-87359504 Msa1086380:intron 15.0%
!! CAATACAAGATTAAAATATT+TGG + chr7_2:87359566-87359585 None:intergenic 15.0%
!!! CAAATATTTTAATCTTGTAT+TGG - chr7_2:87359564-87359583 Msa1086380:intron 15.0%
!! TAATTCAATTTATACAACTT+TGG - chr7_2:87359952-87359971 Msa1086380:intron 15.0%
!! TTCAAATTAAGAAATATTCA+TGG - chr7_2:87360240-87360259 Msa1086380:intron 15.0%
!!! TGTATTTACAATTTTTACTT+CGG + chr7_2:87360326-87360345 None:intergenic 15.0%
!! TAAAGATTAAACAAAAGGAT+TGG + chr7_2:87358378-87358397 None:intergenic 20.0%
!! ATAAATTGTAGGAGTTAAAT+CGG + chr7_2:87358514-87358533 None:intergenic 20.0%
!! TAGATTCTATATTCTCTAAT+TGG + chr7_2:87358702-87358721 None:intergenic 20.0%
!! GAATCAAAAAATCAAAAAAC+TGG - chr7_2:87358862-87358881 Msa1086380:intron 20.0%
!!! TAGATTTGTTGCTAAAATAT+CGG + chr7_2:87359003-87359022 None:intergenic 20.0%
!!! GTGTATTAATTTTTTTGGAA+AGG - chr7_2:87359045-87359064 Msa1086380:CDS 20.0%
!! GTTTATTTCAAAGAATAGAT+TGG - chr7_2:87359083-87359102 Msa1086380:CDS 20.0%
!! ATTCTGATTAATTTATACGT+AGG + chr7_2:87359481-87359500 None:intergenic 20.0%
!! TACAAGATTAAAATATTTGG+AGG + chr7_2:87359563-87359582 None:intergenic 20.0%
!! GAAGTAAAAATTGTAAATAC+AGG - chr7_2:87360325-87360344 Msa1086380:intron 20.0%
!! ATGTAAATAAAAAACATCTC+CGG + chr7_2:87361124-87361143 None:intergenic 20.0%
! CTAATTCTTCTTCTGATTAT+TGG + chr7_2:87357832-87357851 None:intergenic 25.0%
! TATGGAAGCTTAACTATTTA+TGG - chr7_2:87358323-87358342 Msa1086380:CDS 25.0%
! ATGGAAGCTTAACTATTTAT+GGG - chr7_2:87358324-87358343 Msa1086380:CDS 25.0%
!!! AAATACATATTGTTTTTCCG+TGG - chr7_2:87358415-87358434 Msa1086380:CDS 25.0%
! CCTACAATTTATTCTTCATT+CGG - chr7_2:87358522-87358541 Msa1086380:CDS 25.0%
!! AAAATTAGTCTATCCATAAG+AGG - chr7_2:87358898-87358917 Msa1086380:intron 25.0%
! AAATGAAGCAAAGAAAGAAT+CGG + chr7_2:87358949-87358968 None:intergenic 25.0%
!!! GCTAGGTGTATTAATTTTTT+TGG - chr7_2:87359040-87359059 Msa1086380:CDS 25.0%
!! TATAATGAAAAAAGTGCAGT+TGG + chr7_2:87359115-87359134 None:intergenic 25.0%
! TTTCTACCACTATGTTAATA+CGG - chr7_2:87359329-87359348 Msa1086380:CDS 25.0%
! TTCTCTTTACGATGAAAAAT+AGG - chr7_2:87359403-87359422 Msa1086380:intron 25.0%
! TGTTTAGAAATAGAGAAAAG+AGG - chr7_2:87359602-87359621 Msa1086380:intron 25.0%
! CTCATTCGATAATAAAGATA+GGG - chr7_2:87359630-87359649 Msa1086380:intron 25.0%
! CATGAATCTTTCAATTCATT+TGG + chr7_2:87359686-87359705 None:intergenic 25.0%
! TGAATTGAAAGATTCATGTT+TGG - chr7_2:87359688-87359707 Msa1086380:intron 25.0%
! TTCAAAATTCAGAAGAACTA+CGG - chr7_2:87359811-87359830 Msa1086380:intron 25.0%
!! GATTCATTTTGAACAACAAA+GGG - chr7_2:87360003-87360022 Msa1086380:intron 25.0%
! GTGCTAATATTGATATGTTT+GGG - chr7_2:87360128-87360147 Msa1086380:intron 25.0%
! TGCTAATATTGATATGTTTG+GGG - chr7_2:87360129-87360148 Msa1086380:intron 25.0%
! TCTACTAGAATATAGAGTAT+AGG - chr7_2:87360183-87360202 Msa1086380:intron 25.0%
!!! TGAATTTGATTCTTTTTCGA+AGG + chr7_2:87360224-87360243 None:intergenic 25.0%
!! AATTTGGAATCCAAAAATGT+TGG - chr7_2:87360454-87360473 Msa1086380:intron 25.0%
!! TAATACAACACCAACATTTT+TGG + chr7_2:87360467-87360486 None:intergenic 25.0%
!!! AAATGTTGGTGTTGTATTAA+TGG - chr7_2:87360468-87360487 Msa1086380:intron 25.0%
!!! AATGTTGGTGTTGTATTAAT+GGG - chr7_2:87360469-87360488 Msa1086380:intron 25.0%
! ATATGTGTTTATGTAGCTAT+TGG - chr7_2:87360835-87360854 Msa1086380:CDS 25.0%
! TAACTACTTTACAAGAAAGA+GGG - chr7_2:87360887-87360906 Msa1086380:CDS 25.0%
! TGTAAATAAAAAACATCTCC+GGG + chr7_2:87361123-87361142 None:intergenic 25.0%
!! TTATTTACATTCTCGTCTTT+TGG - chr7_2:87361134-87361153 Msa1086380:intron 25.0%
! TAACTGAGAACTTAATTTAG+CGG + chr7_2:87361166-87361185 None:intergenic 25.0%
!! GTAATGGAAATTACATTAGT+AGG + chr7_2:87361255-87361274 None:intergenic 25.0%
! AATGTAATTTCCATTACAGA+TGG - chr7_2:87361258-87361277 Msa1086380:intron 25.0%
ATTTATCTCTCAACACGTTT+AGG + chr7_2:87357771-87357790 None:intergenic 30.0%
GAATCGAAAAGATCTATCTA+GGG + chr7_2:87357798-87357817 None:intergenic 30.0%
TGAATCGAAAAGATCTATCT+AGG + chr7_2:87357799-87357818 None:intergenic 30.0%
GAATATGGAGAAACTTATCA+TGG - chr7_2:87358129-87358148 Msa1086380:CDS 30.0%
!!! ATTACTTAGTCTGGCTTTTA+TGG - chr7_2:87358305-87358324 Msa1086380:CDS 30.0%
CCGAATGAAGAATAAATTGT+AGG + chr7_2:87358525-87358544 None:intergenic 30.0%
AACTAGTATCTACTTCTAAG+AGG - chr7_2:87358652-87358671 Msa1086380:CDS 30.0%
!! TAAGAGGTATCGTTCTTATA+GGG - chr7_2:87358668-87358687 Msa1086380:CDS 30.0%
TCTTTCTTTGCTTCATTTAC+TGG - chr7_2:87358951-87358970 Msa1086380:intron 30.0%
ATAAATCTAAGTGTAGTGCT+AGG - chr7_2:87359023-87359042 Msa1086380:CDS 30.0%
! TCTCTATCAACCAAGAATTT+TGG - chr7_2:87359251-87359270 Msa1086380:CDS 30.0%
CAATTTCCGTATTAACATAG+TGG + chr7_2:87359338-87359357 None:intergenic 30.0%
CACTATGTTAATACGGAAAT+TGG - chr7_2:87359336-87359355 Msa1086380:intron 30.0%
CGATGAAAAATAGGAAAAAC+AGG - chr7_2:87359412-87359431 Msa1086380:intron 30.0%
TCAATTCCGCATTGTATAAA+AGG + chr7_2:87359455-87359474 None:intergenic 30.0%
CTTTGCTGACAATTATTTGT+TGG - chr7_2:87359527-87359546 Msa1086380:intron 30.0%
AGAAATAGAGAAAAGAGGAT+AGG - chr7_2:87359607-87359626 Msa1086380:intron 30.0%
GCTCATTCGATAATAAAGAT+AGG - chr7_2:87359629-87359648 Msa1086380:intron 30.0%
AGATAGGGAAATTTCCTATA+CGG - chr7_2:87359645-87359664 Msa1086380:intron 30.0%
TGAAAGATTCATGTTTGGTT+CGG - chr7_2:87359693-87359712 Msa1086380:intron 30.0%
TCAAAATTCAGAAGAACTAC+GGG - chr7_2:87359812-87359831 Msa1086380:intron 30.0%
! CAATTTTTCTCGTTCTATCT+CGG + chr7_2:87359925-87359944 None:intergenic 30.0%
! CGATTCATTTTGAACAACAA+AGG - chr7_2:87360002-87360021 Msa1086380:intron 30.0%
! GTTTTACAACAAGCATTACA+AGG - chr7_2:87360049-87360068 Msa1086380:intron 30.0%
GGTGCTAATATTGATATGTT+TGG - chr7_2:87360127-87360146 Msa1086380:intron 30.0%
TATATTGCTCAATACGTTCA+CGG + chr7_2:87360300-87360319 None:intergenic 30.0%
! TTATGGTCTTGATGAAGTAA+TGG - chr7_2:87360384-87360403 Msa1086380:intron 30.0%
TGAATTAGTCGAATTTGAAG+AGG - chr7_2:87360411-87360430 Msa1086380:intron 30.0%
GAATTAGTCGAATTTGAAGA+GGG - chr7_2:87360412-87360431 Msa1086380:intron 30.0%
! ATTGATTCTATGATCCCTAT+AGG - chr7_2:87360718-87360737 Msa1086380:intron 30.0%
TTGATTCTATGATCCCTATA+GGG - chr7_2:87360719-87360738 Msa1086380:intron 30.0%
AGATACAATTCTCAATCAAC+AGG - chr7_2:87360801-87360820 Msa1086380:intron 30.0%
GATACAATTCTCAATCAACA+GGG - chr7_2:87360802-87360821 Msa1086380:intron 30.0%
GTAACTACTTTACAAGAAAG+AGG - chr7_2:87360886-87360905 Msa1086380:CDS 30.0%
AACTACTTTACAAGAAAGAG+GGG - chr7_2:87360888-87360907 Msa1086380:CDS 30.0%
AATGGAGTACACTATTATAG+TGG - chr7_2:87360912-87360931 Msa1086380:CDS 30.0%
TTCGTAATAGAAGAGACATT+TGG + chr7_2:87361077-87361096 None:intergenic 30.0%
GCTAAATTAAGTTCTCAGTT+AGG - chr7_2:87361165-87361184 Msa1086380:intron 30.0%
AAATATTTGGCCATCTGTAA+TGG + chr7_2:87361271-87361290 None:intergenic 30.0%
GATCGGCAGATAAAAATATT+TGG + chr7_2:87361284-87361303 None:intergenic 30.0%
TCAAATTAAAGCCATGAAAC+AGG - chr7_2:87361371-87361390 Msa1086380:intron 30.0%
! GATAGATCTTTTCGATTCAG+AGG - chr7_2:87357800-87357819 Msa1086380:CDS 35.0%
GGGTACTTTATTACTTAGTC+TGG - chr7_2:87358296-87358315 Msa1086380:CDS 35.0%
AAGCTTAACTATTTATGGGC+TGG - chr7_2:87358328-87358347 Msa1086380:CDS 35.0%
CATTGGACTAAATAAAGGGA+CGG + chr7_2:87358572-87358591 None:intergenic 35.0%
CGCTCATTGGACTAAATAAA+GGG + chr7_2:87358576-87358595 None:intergenic 35.0%
!! CTAAGAGGTATCGTTCTTAT+AGG - chr7_2:87358667-87358686 Msa1086380:CDS 35.0%
! ATGAAAAAAGTGCAGTTGGT+TGG + chr7_2:87359111-87359130 None:intergenic 35.0%
TTTAGTAAGAAGTCATTCGC+CGG + chr7_2:87359158-87359177 None:intergenic 35.0%
! TGGTAATGCTCCAAAATTCT+TGG + chr7_2:87359264-87359283 None:intergenic 35.0%
!!! AGAATTTTGGAGCATTACCA+TGG - chr7_2:87359264-87359283 Msa1086380:CDS 35.0%
!! AAACTGGTTAGCTTTAACCA+TGG + chr7_2:87359284-87359303 None:intergenic 35.0%
ATTGCGTCTAAACTTCAAAC+TGG + chr7_2:87359300-87359319 None:intergenic 35.0%
ATTCCGCATTGTATAAAAGG+AGG + chr7_2:87359452-87359471 None:intergenic 35.0%
! GAAAGATTCATGTTTGGTTC+GGG - chr7_2:87359694-87359713 Msa1086380:intron 35.0%
GATTAATCAAGTGCAACAGA+GGG - chr7_2:87360027-87360046 Msa1086380:intron 35.0%
GAGTTACATTTACGTACGAT+CGG - chr7_2:87360106-87360125 Msa1086380:intron 35.0%
ACTAATTTCATCTGCACGAA+TGG + chr7_2:87360269-87360288 None:intergenic 35.0%
! TGTAGGCATTGCTTTGAATT+TGG - chr7_2:87360438-87360457 Msa1086380:intron 35.0%
ACCATCAATAGGTTTAGCTA+GGG + chr7_2:87360593-87360612 None:intergenic 35.0%
AAATTTCAGCTTCGGAATCT+CGG - chr7_2:87360620-87360639 Msa1086380:intron 35.0%
GCCAGCGAGAATTAATTATT+GGG - chr7_2:87360746-87360765 Msa1086380:intron 35.0%
CCAGCGAGAATTAATTATTG+GGG - chr7_2:87360747-87360766 Msa1086380:intron 35.0%
TGATTAAAGTGTGACGTTCA+CGG + chr7_2:87361017-87361036 None:intergenic 35.0%
TTAAGTTCTCAGTTAGGTGA+AGG - chr7_2:87361171-87361190 Msa1086380:intron 35.0%
! GATTCCAGCATTGAATAGAT+CGG + chr7_2:87361301-87361320 None:intergenic 35.0%
AATCAGACCAGCTATTAATG+TGG - chr7_2:87361317-87361336 Msa1086380:intron 35.0%
ATCAGACCAGCTATTAATGT+GGG - chr7_2:87361318-87361337 Msa1086380:intron 35.0%
GAAATACCCACATTAATAGC+TGG + chr7_2:87361327-87361346 None:intergenic 35.0%
! CACGTTTAGGATGAGCATAA+CGG + chr7_2:87357758-87357777 None:intergenic 40.0%
!!! CTTATTTTGTCCTCTGCTTC+CGG + chr7_2:87358276-87358295 None:intergenic 40.0%
GGAAGCAGAGGACAAAATAA+GGG - chr7_2:87358275-87358294 Msa1086380:CDS 40.0%
GAAGCAGAGGACAAAATAAG+GGG - chr7_2:87358276-87358295 Msa1086380:CDS 40.0%
ATAGCAGCAATGAAAGTCCA+CGG + chr7_2:87358435-87358454 None:intergenic 40.0%
CTAAATAAAGGGACGGAAGA+AGG + chr7_2:87358565-87358584 None:intergenic 40.0%
GCGCTCATTGGACTAAATAA+AGG + chr7_2:87358577-87358596 None:intergenic 40.0%
TATGATCGCATCTCCTCTTA+TGG + chr7_2:87358914-87358933 None:intergenic 40.0%
CTAGAAAAACGTGCATGATC+CGG - chr7_2:87359136-87359155 Msa1086380:CDS 40.0%
CAATGAATCGCGAAATGCTA+TGG + chr7_2:87359215-87359234 None:intergenic 40.0%
CATAGCATTTCGCGATTCAT+TGG - chr7_2:87359213-87359232 Msa1086380:intron 40.0%
! ACGCCTCCTTTTATACAATG+CGG - chr7_2:87359446-87359465 Msa1086380:intron 40.0%
TCTCACACTCAATTCCGTAT+AGG + chr7_2:87359662-87359681 None:intergenic 40.0%
CGTTTCTACTTTCCTTAAGC+GGG + chr7_2:87359871-87359890 None:intergenic 40.0%
CCGTTTCTACTTTCCTTAAG+CGG + chr7_2:87359872-87359891 None:intergenic 40.0%
CCGCTTAAGGAAAGTAGAAA+CGG - chr7_2:87359869-87359888 Msa1086380:intron 40.0%
AAGGAAAGTAGAAACGGAAG+CGG - chr7_2:87359875-87359894 Msa1086380:intron 40.0%
CGATTAATCAAGTGCAACAG+AGG - chr7_2:87360026-87360045 Msa1086380:intron 40.0%
! ACAGGTACTGTACTTCAAGT+AGG - chr7_2:87360343-87360362 Msa1086380:intron 40.0%
!! GAATTTGAAGAGGGTACTGT+AGG - chr7_2:87360421-87360440 Msa1086380:intron 40.0%
! GGTGTTGTATTAATGGGTGA+TGG - chr7_2:87360475-87360494 Msa1086380:intron 40.0%
!! TGATGGTTTGCTGATACAAG+AGG - chr7_2:87360492-87360511 Msa1086380:intron 40.0%
!! GATGGTTTGCTGATACAAGA+GGG - chr7_2:87360493-87360512 Msa1086380:intron 40.0%
ACCAGTAAGTGAGGGTTATT+TGG - chr7_2:87360552-87360571 Msa1086380:intron 40.0%
CCAGTAAGTGAGGGTTATTT+GGG - chr7_2:87360553-87360572 Msa1086380:intron 40.0%
GACCATCAATAGGTTTAGCT+AGG + chr7_2:87360594-87360613 None:intergenic 40.0%
ATTTCTCCTCGACCATCAAT+AGG + chr7_2:87360604-87360623 None:intergenic 40.0%
TCGAGGAGAAATTTCAGCTT+CGG - chr7_2:87360612-87360631 Msa1086380:intron 40.0%
GAACGTCTGGAAATAATACC+GGG + chr7_2:87360664-87360683 None:intergenic 40.0%
GGAACGTCTGGAAATAATAC+CGG + chr7_2:87360665-87360684 None:intergenic 40.0%
GGCCAGCGAGAATTAATTAT+TGG - chr7_2:87360745-87360764 Msa1086380:intron 40.0%
CCCCAATAATTAATTCTCGC+TGG + chr7_2:87360750-87360769 None:intergenic 40.0%
ATTATTGGGGACAGACAAAC+AGG - chr7_2:87360760-87360779 Msa1086380:intron 40.0%
!! TGGTCAAAAAGCATCTTCTG+TGG - chr7_2:87360855-87360874 Msa1086380:CDS 40.0%
TTTACAAGAAAGAGGGGCAA+TGG - chr7_2:87360894-87360913 Msa1086380:CDS 40.0%
AGCTGAAACATCTCCTGATT+GGG + chr7_2:87361226-87361245 None:intergenic 40.0%
AAGCTGAAACATCTCCTGAT+TGG + chr7_2:87361227-87361246 None:intergenic 40.0%
TTTACCAGCTACCTGTTTCA+TGG + chr7_2:87361385-87361404 None:intergenic 40.0%
ACAGAAGCAGCAGAAATCAG+TGG + chr7_2:87358157-87358176 None:intergenic 45.0%
CGGAAGCAGAGGACAAAATA+AGG - chr7_2:87358274-87358293 Msa1086380:CDS 45.0%
!! TAAATAAAGGGGGCGCTCAT+TGG + chr7_2:87358589-87358608 None:intergenic 45.0%
AAGTAGAAACGGAAGCGGAT+CGG - chr7_2:87359880-87359899 Msa1086380:intron 45.0%
ACAAGCATTACAAGGAGCTC+TGG - chr7_2:87360057-87360076 Msa1086380:intron 45.0%
CAAGCATTACAAGGAGCTCT+GGG - chr7_2:87360058-87360077 Msa1086380:intron 45.0%
ACTGTACTTCAAGTAGGCGA+CGG - chr7_2:87360349-87360368 Msa1086380:intron 45.0%
GACGGCATTGCTCGTATTTA+TGG - chr7_2:87360367-87360386 Msa1086380:intron 45.0%
GGTCTTGATGAAGTAATGGC+AGG - chr7_2:87360388-87360407 Msa1086380:intron 45.0%
GCTGATACAAGAGGGAAGTT+CGG - chr7_2:87360501-87360520 Msa1086380:intron 45.0%
GGAAGTTCGGTAAAAGCAAC+AGG - chr7_2:87360514-87360533 Msa1086380:intron 45.0%
TGCTCAGATACCAGTAAGTG+AGG - chr7_2:87360543-87360562 Msa1086380:intron 45.0%
GCTCAGATACCAGTAAGTGA+GGG - chr7_2:87360544-87360563 Msa1086380:intron 45.0%
CCCAAATAACCCTCACTTAC+TGG + chr7_2:87360556-87360575 None:intergenic 45.0%
GCCCTAGCTAAACCTATTGA+TGG - chr7_2:87360589-87360608 Msa1086380:intron 45.0%
! GCTAAACCTATTGATGGTCG+AGG - chr7_2:87360595-87360614 Msa1086380:intron 45.0%
TCTGGAAATAATACCGGGAG+CGG + chr7_2:87360659-87360678 None:intergenic 45.0%
CGTTTGAAGAGGCTCATACA+CGG + chr7_2:87360686-87360705 None:intergenic 45.0%
CGTGTATGAGCCTCTTCAAA+CGG - chr7_2:87360684-87360703 Msa1086380:intron 45.0%
GTGTATGAGCCTCTTCAAAC+GGG - chr7_2:87360685-87360704 Msa1086380:intron 45.0%
GCAATAAGTCCCGTTTGAAG+AGG + chr7_2:87360697-87360716 None:intergenic 45.0%
!! GCGAGGTATTGTAATGTAGC+TGG + chr7_2:87360955-87360974 None:intergenic 45.0%
CAATACCTCGCTCCTTATAC+AGG - chr7_2:87360964-87360983 Msa1086380:CDS 45.0%
TAAGCCTGTGCTTGTTTGGA+GGG + chr7_2:87361051-87361070 None:intergenic 45.0%
ATAAGCCTGTGCTTGTTTGG+AGG + chr7_2:87361052-87361071 None:intergenic 45.0%
CTTCTATTACGAAGACCACC+AGG - chr7_2:87361084-87361103 Msa1086380:intron 45.0%
CCTGATTGGGTCTCAACTAT+TGG + chr7_2:87361213-87361232 None:intergenic 45.0%
CCAATAGTTGAGACCCAATC+AGG - chr7_2:87361210-87361229 Msa1086380:intron 45.0%
TCTGCCGATCTATTCAATGC+TGG - chr7_2:87361294-87361313 Msa1086380:intron 45.0%
GGTATTTCCGTTTCCAGAGT+TGG - chr7_2:87361339-87361358 Msa1086380:intron 45.0%
TTCCGTTTCCAGAGTTGGAT+CGG - chr7_2:87361344-87361363 Msa1086380:intron 45.0%
AAAGCCATGAAACAGGTAGC+TGG - chr7_2:87361378-87361397 Msa1086380:intron 45.0%
! TGCTGCTTCTGTTATCGCTG+CGG - chr7_2:87358165-87358184 Msa1086380:CDS 50.0%
TCCAATAGAAGCAAGCCCGA+CGG + chr7_2:87358195-87358214 None:intergenic 50.0%
GCTTCTATTGGACCTGGAGT+TGG - chr7_2:87358203-87358222 Msa1086380:CDS 50.0%
! ATTGGACCTGGAGTTGGTCA+AGG - chr7_2:87358209-87358228 Msa1086380:CDS 50.0%
CTTGTACCTTGACCAACTCC+AGG + chr7_2:87358218-87358237 None:intergenic 50.0%
TTGGTCAAGGTACAAGCTGC+AGG - chr7_2:87358222-87358241 Msa1086380:CDS 50.0%
TGGTCAAGGTACAAGCTGCA+GGG - chr7_2:87358223-87358242 Msa1086380:CDS 50.0%
TTCATTTACTGGCCATCCGC+CGG - chr7_2:87358962-87358981 Msa1086380:intron 50.0%
TCGGTATCAACCCGAACTTC+CGG + chr7_2:87358984-87359003 None:intergenic 50.0%
GGCTTTCTCCAGCTGTTCAA+CGG + chr7_2:87359844-87359863 None:intergenic 50.0%
TTGAACAGCTGGAGAAAGCC+CGG - chr7_2:87359844-87359863 Msa1086380:intron 50.0%
TTAATCGAATCTCCCGCTCC+CGG - chr7_2:87360643-87360662 Msa1086380:intron 50.0%
CTGGAAATAATACCGGGAGC+GGG + chr7_2:87360658-87360677 None:intergenic 50.0%
TCTATGATCCCTATAGGGCG+TGG - chr7_2:87360724-87360743 Msa1086380:intron 50.0%
AGCATCTTCTGTGGCTCAAG+TGG - chr7_2:87360864-87360883 Msa1086380:CDS 50.0%
TCCTTATACAGGTGCAGCTC+TGG - chr7_2:87360975-87360994 Msa1086380:intron 50.0%
GCGATAAGCCTGTGCTTGTT+TGG + chr7_2:87361055-87361074 None:intergenic 50.0%
GCTTCTGTTATCGCTGCGGT+TGG - chr7_2:87358169-87358188 Msa1086380:CDS 55.0%
! GGGCTTGCTTCTATTGGACC+TGG - chr7_2:87358197-87358216 Msa1086380:CDS 55.0%
CTGCAGGGCAAGCTGTAGAA+GGG - chr7_2:87358238-87358257 Msa1086380:CDS 55.0%
AGAAGGGATTGCGCGACAAC+CGG - chr7_2:87358254-87358273 Msa1086380:CDS 55.0%
GTATCAACCCGAACTTCCGG+CGG + chr7_2:87358981-87359000 None:intergenic 55.0%
TGAACAGCTGGAGAAAGCCC+GGG - chr7_2:87359845-87359864 Msa1086380:intron 55.0%
TACTTTCCTTAAGCGGGCCC+GGG + chr7_2:87359865-87359884 None:intergenic 55.0%
CTACTTTCCTTAAGCGGGCC+CGG + chr7_2:87359866-87359885 None:intergenic 55.0%
! GCGGATCGGTTTCGAGTGAA+TGG - chr7_2:87359894-87359913 Msa1086380:intron 55.0%
AGGCTCATACACGGAACGTC+TGG + chr7_2:87360677-87360696 None:intergenic 55.0%
CTGCACCTGTATAAGGAGCG+AGG + chr7_2:87360972-87360991 None:intergenic 55.0%
GCCAGAGCTGCACCTGTATA+AGG + chr7_2:87360979-87360998 None:intergenic 55.0%
CGATCCCTCCAAACAAGCAC+AGG - chr7_2:87361044-87361063 Msa1086380:intron 55.0%
! CGCCGATCCAACTCTGGAAA+CGG + chr7_2:87361349-87361368 None:intergenic 55.0%
CGTTTCCAGAGTTGGATCGG+CGG - chr7_2:87361347-87361366 Msa1086380:intron 55.0%
! TTATCGCTGCGGTTGGCCGT+CGG - chr7_2:87358176-87358195 Msa1086380:CDS 60.0%
! GCCGTCGGGCTTGCTTCTAT+TGG - chr7_2:87358191-87358210 Msa1086380:CDS 60.0%
GCTGCAGGGCAAGCTGTAGA+AGG - chr7_2:87358237-87358256 Msa1086380:CDS 60.0%
GGAAGCAGCCGTTGAACAGC+TGG - chr7_2:87359833-87359852 Msa1086380:intron 60.0%
TTGAGCCGCCGATCCAACTC+TGG + chr7_2:87361355-87361374 None:intergenic 60.0%
! TATCGCTGCGGTTGGCCGTC+GGG - chr7_2:87358177-87358196 Msa1086380:CDS 65.0%
TGCGCGACAACCGGAAGCAG+AGG - chr7_2:87358263-87358282 Msa1086380:CDS 65.0%
CTGGCCATCCGCCGGAAGTT+CGG - chr7_2:87358970-87358989 Msa1086380:intron 65.0%
TGGCCATCCGCCGGAAGTTC+GGG - chr7_2:87358971-87358990 Msa1086380:intron 65.0%
CAACCCGAACTTCCGGCGGA+TGG + chr7_2:87358977-87358996 None:intergenic 65.0%
AGAAAGCCCGGGCCCGCTTA+AGG - chr7_2:87359856-87359875 Msa1086380:intron 65.0%
CTCGCTGGCCACGCCCTATA+GGG + chr7_2:87360735-87360754 None:intergenic 65.0%
TCTCGCTGGCCACGCCCTAT+AGG + chr7_2:87360736-87360755 None:intergenic 65.0%
GGATACGCTTCGCGACCTGG+TGG + chr7_2:87361102-87361121 None:intergenic 65.0%
CCAGGTCGCGAAGCGTATCC+CGG - chr7_2:87361102-87361121 Msa1086380:intron 65.0%
CCGGGATACGCTTCGCGACC+TGG + chr7_2:87361105-87361124 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 87357725 87361407 87357725 ID=Msa1086380;Name=Msa1086380
chr7_2 mRNA 87357725 87361407 87357725 ID=Msa1086380-mRNA-1;Parent=Msa1086380;Name=Msa1086380-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|0.8|0.25|0.2|5|0|542
chr7_2 exon 87361404 87361407 87361404 ID=Msa1086380-mRNA-1:exon:23757;Parent=Msa1086380-mRNA-1
chr7_2 exon 87360835 87360993 87360835 ID=Msa1086380-mRNA-1:exon:23756;Parent=Msa1086380-mRNA-1
chr7_2 exon 87359217 87359351 87359217 ID=Msa1086380-mRNA-1:exon:23755;Parent=Msa1086380-mRNA-1
chr7_2 exon 87359005 87359205 87359005 ID=Msa1086380-mRNA-1:exon:23754;Parent=Msa1086380-mRNA-1
chr7_2 exon 87357725 87358854 87357725 ID=Msa1086380-mRNA-1:exon:23753;Parent=Msa1086380-mRNA-1
chr7_2 CDS 87361404 87361407 87361404 ID=Msa1086380-mRNA-1:cds;Parent=Msa1086380-mRNA-1
chr7_2 CDS 87360835 87360993 87360835 ID=Msa1086380-mRNA-1:cds;Parent=Msa1086380-mRNA-1
chr7_2 CDS 87359217 87359351 87359217 ID=Msa1086380-mRNA-1:cds;Parent=Msa1086380-mRNA-1
chr7_2 CDS 87359005 87359205 87359005 ID=Msa1086380-mRNA-1:cds;Parent=Msa1086380-mRNA-1
chr7_2 CDS 87357725 87358854 87357725 ID=Msa1086380-mRNA-1:cds;Parent=Msa1086380-mRNA-1
Gene Sequence

>Msa1086380

ATGGAAACTTATCATGGATCCACTGATTTCTGCTGCTTCTGTTATCGCTGCGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGAGTTGGTCAAGGTACAAGCTGCAGGGCAAGCTGTAGAAGGGATTGCGCGACAACCGGAAGCAGAGGACAAAATAAGGGATAATCGAAAACAGAGAATCTTGAGAACTATTCAAAATTCAGAAGAACTACGGGAAGCAGCCGTTGAACAGCTGGAGAAAGCCCGGGCCCGCTTAAGGAAAGTAGAAACGGAAGCGGATCGGTTTCGAGTGAATGATAGAACGAGAAAAATTGAATTAATTAATTCAATTTATACAACTTTGGAACAATTCGAAAATTACAAAAATGAAACGATTCATTTTGAACAACAAAGGGCGATTAATCAAGTGCAACAGAGGGTTTTACAACAAGCATTACAAGGAGCTCTGGGAACTCTGAATAGTTGCTTAAACAACGAGTTACATTTACGTACGATCGATGAAATTAGTAAAATTATCCGTGAACGTATTGAGCAATATAATACCGAAGTAAAAATTGTAAATACAGGTACTGTACTTCAAGTAGGCGACGGCATTGCTCGTATTTATGGTCTTGATGAAGTAATGGCAGGTGAATTAGTCGAATTTGAAGAGGGTACTGTAGGCATTGCTTTGAATTTGGAATCCAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGCTGATACAAGAGGGAAGTTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGGTTATTTGGGTCGTGTTGTAAATGCCCTAGCTAAACCTATTGATGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGGTTAATCGAATCTCCCGCTCCCGGTATTATTTCCAGACGTTCCGTGTATGAGCCTCTTCAAACGGGACTTATTGCTATTGATTCTATGATCCCTATAGGGCGTGGCCAGCGAGAATTAATTATTGGGGACAGACAAACAGGTAAAACAGCAGTAGCAACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCATCTTCTGTGGCTCAAGTGGTAACTACTTTACAAGAAAGAGGGGCAATGGAGTACACTATTATAGTGGCTGAAACAGCAAATTCTCCAGCTACATTACAATACCTCGCTCCTTATACAGGTGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATCATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCAGGTCGCGAAGCGTATCCCGGAGATGTTTTTTATTTACATTCTCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCAGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTTTTATCTGCCGATCTATTCAATGCTGGAATCAGACCAGCTATTAATGTGGGTATTTCCGTTTCCAGAGTTGGATCGGCGGCTCAAATTAAAGCCATGAAACAGGTAGCTGGTAAATAA

Protein sequence

>Msa1086380

METYHGSTDFCCFCYRCGWPSGLLLLDLELVKVQAAGQAVEGIARQPEAEDKIRDNRKQRILRTIQNSEELREAAVEQLEKARARLRKVETEADRFRVNDRTRKIELINSIYTTLEQFENYKNETIHFEQQRAINQVQQRVLQQALQGALGTLNSCLNNELHLRTIDEISKIIRERIEQYNTEVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGTVGIALNLESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETANSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGK*