Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0503540 | XP_039687154.1 | 78.065 | 775 | 123 | 9 | 5 | 762 | 5 | 749 | 0.0 | 1173 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0503540 | A0A396IRT2 | 78.065 | 775 | 123 | 9 | 5 | 762 | 5 | 749 | 0.0 | 1173 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004880 | Msa0503540 | 0.804865 | 1.759804e-49 | -8.615850e-47 |
Msa0012440 | Msa0503540 | 0.820798 | 5.669125e-53 | -8.615850e-47 |
Msa0017510 | Msa0503540 | 0.802843 | 4.629225e-49 | -8.615850e-47 |
Msa0029910 | Msa0503540 | 0.815402 | 9.414344e-52 | -8.615850e-47 |
Msa0057240 | Msa0503540 | 0.805675 | 1.190570e-49 | -8.615850e-47 |
Msa0112750 | Msa0503540 | 0.801790 | 7.623806e-49 | -8.615850e-47 |
Msa0149560 | Msa0503540 | 0.810889 | 9.208440e-51 | -8.615850e-47 |
Msa0157290 | Msa0503540 | 0.803214 | 3.878821e-49 | -8.615850e-47 |
Msa0169920 | Msa0503540 | 0.805080 | 1.586059e-49 | -8.615850e-47 |
Msa0191040 | Msa0503540 | 0.806080 | 9.785624e-50 | -8.615850e-47 |
Msa0227470 | Msa0503540 | 0.802173 | 6.360444e-49 | -8.615850e-47 |
Msa0233340 | Msa0503540 | 0.806423 | 8.286007e-50 | -8.615850e-47 |
Msa0410890 | Msa0503540 | 0.820819 | 5.606529e-53 | -8.615850e-47 |
Msa0484780 | Msa0503540 | 0.814968 | 1.175434e-51 | -8.615850e-47 |
Msa0503540 | Msa0512900 | 0.802066 | 6.693080e-49 | -8.615850e-47 |
Msa0503540 | Msa0590800 | 0.804899 | 1.730552e-49 | -8.615850e-47 |
Msa0503540 | Msa0657970 | 0.805087 | 1.580880e-49 | -8.615850e-47 |
Msa0503540 | Msa0717670 | 0.800491 | 1.406130e-48 | -8.615850e-47 |
Msa0503540 | Msa0880140 | 0.802895 | 4.514772e-49 | -8.615850e-47 |
Msa0503540 | Msa0909120 | 0.808221 | 3.444553e-50 | -8.615850e-47 |
Msa0503540 | Msa1082500 | 0.815677 | 8.179192e-52 | -8.615850e-47 |
Msa0503540 | Msa1278840 | 0.805240 | 1.468736e-49 | -8.615850e-47 |
Msa0503540 | Msa1283860 | 0.802278 | 6.051482e-49 | -8.615850e-47 |
Msa0503540 | Msa1429420 | 0.814056 | 1.870736e-51 | -8.615850e-47 |
Msa0503540 | Msa1438250 | 0.804219 | 2.399142e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0503540 | MtrunA17_Chr3g0102001 | 78.065 | 775 | 123 | 9 | 5 | 762 | 5 | 749 | 0.0 | 1173 |
Msa0503540 | MtrunA17_Chr5g0439061 | 48.497 | 765 | 324 | 16 | 25 | 762 | 23 | 744 | 0.0 | 631 |
Msa0503540 | MtrunA17_Chr3g0098541 | 70.833 | 384 | 72 | 9 | 50 | 418 | 1 | 359 | 1.86e-177 | 512 |
Msa0503540 | MtrunA17_Chr2g0286601 | 36.228 | 737 | 403 | 13 | 25 | 754 | 9 | 685 | 1.91e-141 | 432 |
Msa0503540 | MtrunA17_Chr2g0286551 | 35.414 | 737 | 388 | 16 | 25 | 754 | 9 | 664 | 1.28e-125 | 390 |
Msa0503540 | MtrunA17_Chr3g0098481 | 53.481 | 316 | 136 | 4 | 450 | 759 | 32 | 342 | 7.77e-109 | 335 |
Msa0503540 | MtrunA17_Chr3g0098531 | 50.680 | 294 | 135 | 4 | 471 | 759 | 6 | 294 | 1.13e-96 | 302 |
Msa0503540 | MtrunA17_Chr3g0098301 | 48.387 | 310 | 149 | 4 | 450 | 753 | 98 | 402 | 2.58e-87 | 281 |
Msa0503540 | MtrunA17_Chr5g0439051 | 67.157 | 204 | 66 | 1 | 559 | 762 | 20 | 222 | 1.82e-86 | 272 |
Msa0503540 | MtrunA17_Chr5g0439071 | 34.501 | 571 | 281 | 13 | 28 | 559 | 26 | 542 | 3.84e-83 | 275 |
Msa0503540 | MtrunA17_Chr5g0439081 | 56.784 | 199 | 84 | 1 | 559 | 757 | 16 | 212 | 1.55e-72 | 235 |
Msa0503540 | MtrunA17_Chr2g0286561 | 46.667 | 210 | 112 | 0 | 549 | 758 | 5 | 214 | 3.29e-58 | 197 |
Msa0503540 | MtrunA17_Chr3g0098291 | 48.291 | 234 | 106 | 5 | 12 | 242 | 14 | 235 | 5.70e-58 | 197 |
Msa0503540 | MtrunA17_Chr5g0443001 | 35.235 | 298 | 183 | 5 | 450 | 745 | 309 | 598 | 1.09e-45 | 173 |
Msa0503540 | MtrunA17_Chr5g0443001 | 25.000 | 220 | 142 | 5 | 30 | 245 | 39 | 239 | 3.78e-11 | 66.6 |
Msa0503540 | MtrunA17_Chr2g0297701 | 33.010 | 309 | 193 | 4 | 442 | 745 | 267 | 566 | 4.62e-45 | 171 |
Msa0503540 | MtrunA17_Chr2g0297481 | 33.648 | 318 | 198 | 5 | 430 | 745 | 162 | 468 | 2.53e-44 | 167 |
Msa0503540 | MtrunA17_Chr5g0439021 | 48.485 | 165 | 75 | 2 | 28 | 191 | 26 | 181 | 3.44e-44 | 157 |
Msa0503540 | MtrunA17_Chr2g0297491 | 34.839 | 310 | 193 | 3 | 438 | 745 | 72 | 374 | 3.65e-44 | 164 |
Msa0503540 | MtrunA17_Chr5g0410201 | 32.026 | 306 | 187 | 4 | 453 | 749 | 33 | 326 | 4.96e-43 | 159 |
Msa0503540 | MtrunA17_Chr5g0410271 | 32.353 | 306 | 186 | 4 | 453 | 749 | 32 | 325 | 1.16e-42 | 157 |
Msa0503540 | MtrunA17_Chr2g0297681 | 33.439 | 314 | 199 | 5 | 438 | 748 | 383 | 689 | 2.65e-42 | 164 |
Msa0503540 | MtrunA17_Chr5g0410171 | 31.922 | 307 | 186 | 5 | 453 | 749 | 439 | 732 | 4.88e-42 | 164 |
Msa0503540 | MtrunA17_Chr2g0297691 | 33.441 | 311 | 197 | 5 | 438 | 745 | 385 | 688 | 1.04e-41 | 162 |
Msa0503540 | MtrunA17_Chr2g0284501 | 36.977 | 311 | 178 | 5 | 452 | 754 | 367 | 667 | 2.00e-41 | 161 |
Msa0503540 | MtrunA17_Chr2g0284501 | 29.064 | 203 | 123 | 6 | 50 | 244 | 41 | 230 | 8.16e-14 | 75.1 |
Msa0503540 | MtrunA17_Chr5g0410341 | 31.596 | 307 | 187 | 5 | 453 | 749 | 451 | 744 | 3.97e-41 | 161 |
Msa0503540 | MtrunA17_Chr3g0098491 | 48.765 | 162 | 71 | 3 | 30 | 191 | 1 | 150 | 4.93e-41 | 147 |
Msa0503540 | MtrunA17_Chr2g0284541 | 37.179 | 312 | 174 | 7 | 452 | 754 | 351 | 649 | 2.15e-40 | 158 |
Msa0503540 | MtrunA17_Chr2g0297651 | 33.762 | 311 | 195 | 6 | 438 | 745 | 385 | 687 | 5.49e-40 | 157 |
Msa0503540 | MtrunA17_Chr3g0098521 | 46.951 | 164 | 75 | 2 | 30 | 193 | 1 | 152 | 7.90e-40 | 144 |
Msa0503540 | MtrunA17_Chr6g0456141 | 31.494 | 308 | 199 | 5 | 436 | 741 | 77 | 374 | 1.69e-39 | 150 |
Msa0503540 | MtrunA17_Chr2g0286571 | 32.550 | 298 | 179 | 4 | 25 | 322 | 9 | 284 | 2.46e-39 | 148 |
Msa0503540 | MtrunA17_Chr6g0457101 | 31.788 | 302 | 194 | 4 | 451 | 749 | 394 | 686 | 4.80e-39 | 154 |
Msa0503540 | MtrunA17_Chr6g0456101 | 31.169 | 308 | 200 | 5 | 436 | 741 | 434 | 731 | 6.60e-38 | 151 |
Msa0503540 | MtrunA17_Chr5g0410371 | 33.555 | 301 | 183 | 6 | 454 | 746 | 1 | 292 | 1.05e-37 | 143 |
Msa0503540 | MtrunA17_Chr3g0100741 | 33.217 | 286 | 182 | 4 | 450 | 734 | 304 | 581 | 3.22e-37 | 147 |
Msa0503540 | MtrunA17_Chr3g0100301 | 36.869 | 198 | 123 | 2 | 543 | 739 | 204 | 400 | 1.91e-35 | 139 |
Msa0503540 | MtrunA17_Chr5g0439031 | 39.462 | 223 | 93 | 7 | 192 | 400 | 7 | 201 | 3.76e-35 | 134 |
Msa0503540 | MtrunA17_Chr5g0410461 | 32.890 | 301 | 188 | 5 | 453 | 746 | 167 | 460 | 1.52e-34 | 137 |
Msa0503540 | MtrunA17_Chr5g0410191 | 35.079 | 191 | 123 | 1 | 559 | 749 | 2 | 191 | 1.17e-33 | 127 |
Msa0503540 | MtrunA17_Chr5g0439041 | 51.969 | 127 | 58 | 2 | 436 | 559 | 42 | 168 | 3.74e-32 | 124 |
Msa0503540 | MtrunA17_Chr2g0297711 | 28.526 | 312 | 209 | 5 | 442 | 747 | 222 | 525 | 6.71e-32 | 131 |
Msa0503540 | MtrunA17_Chr5g0410581 | 30.420 | 286 | 172 | 4 | 432 | 706 | 479 | 748 | 9.65e-31 | 129 |
Msa0503540 | MtrunA17_Chr3g0096941 | 29.433 | 282 | 191 | 3 | 450 | 730 | 305 | 579 | 1.27e-30 | 127 |
Msa0503540 | MtrunA17_Chr3g0098511 | 53.535 | 99 | 44 | 1 | 663 | 759 | 1 | 99 | 4.62e-30 | 114 |
Msa0503540 | MtrunA17_Chr5g0410541 | 40.769 | 130 | 76 | 1 | 574 | 703 | 38 | 166 | 3.87e-22 | 95.9 |
Msa0503540 | MtrunA17_Chr5g0410451 | 33.766 | 154 | 102 | 0 | 553 | 706 | 35 | 188 | 2.74e-21 | 94.0 |
Msa0503540 | MtrunA17_Chr5g0410181 | 32.576 | 132 | 88 | 1 | 618 | 749 | 2 | 132 | 1.43e-17 | 79.7 |
Msa0503540 | MtrunA17_Chr5g0410511 | 33.784 | 148 | 98 | 0 | 559 | 706 | 2 | 149 | 1.88e-17 | 81.6 |
Msa0503540 | MtrunA17_Chr2g0297611 | 37.363 | 91 | 55 | 2 | 564 | 654 | 1 | 89 | 1.89e-14 | 69.7 |
Msa0503540 | MtrunA17_Chr1g0211531 | 25.407 | 307 | 209 | 8 | 449 | 745 | 235 | 531 | 2.12e-14 | 76.6 |
Msa0503540 | MtrunA17_Chr5g0410381 | 29.680 | 219 | 109 | 9 | 52 | 240 | 38 | 241 | 1.58e-11 | 65.5 |
Msa0503540 | MtrunA17_Chr3g0100921 | 28.788 | 132 | 94 | 0 | 608 | 739 | 2 | 133 | 1.92e-11 | 62.4 |
Msa0503540 | MtrunA17_Chr7g0263471 | 28.571 | 168 | 101 | 3 | 51 | 218 | 118 | 266 | 6.25e-11 | 65.9 |
Msa0503540 | MtrunA17_Chr1g0211511 | 24.670 | 227 | 158 | 5 | 447 | 668 | 7 | 225 | 7.17e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0503540 | AT5G04730.1 | 34.416 | 308 | 192 | 5 | 453 | 757 | 297 | 597 | 2.14e-43 | 166 |
Msa0503540 | AT3G18670.1 | 34.628 | 309 | 190 | 6 | 453 | 758 | 292 | 591 | 2.90e-43 | 166 |
Msa0503540 | AT3G18670.2 | 34.185 | 313 | 194 | 6 | 453 | 762 | 347 | 650 | 4.48e-43 | 166 |
Msa0503540 | AT3G18670.2 | 26.047 | 215 | 148 | 4 | 32 | 245 | 60 | 264 | 1.20e-13 | 75.1 |
Msa0503540 | AT5G35810.1 | 32.698 | 315 | 196 | 7 | 442 | 747 | 23 | 330 | 2.55e-42 | 157 |
Msa0503540 | AT5G04700.1 | 34.783 | 299 | 185 | 5 | 451 | 745 | 360 | 652 | 3.28e-40 | 158 |
Msa0503540 | AT5G04690.3 | 33.333 | 303 | 179 | 7 | 451 | 745 | 341 | 628 | 1.71e-38 | 152 |
Msa0503540 | AT5G04690.2 | 33.333 | 303 | 179 | 7 | 451 | 745 | 355 | 642 | 1.76e-38 | 152 |
Msa0503540 | AT5G04690.1 | 33.333 | 303 | 179 | 7 | 451 | 745 | 321 | 608 | 1.81e-38 | 152 |
Msa0503540 | AT3G54065.1 | 34.762 | 210 | 131 | 1 | 545 | 748 | 8 | 217 | 2.83e-35 | 134 |
Msa0503540 | AT5G04680.3 | 33.117 | 308 | 186 | 7 | 451 | 745 | 333 | 633 | 8.15e-33 | 135 |
Msa0503540 | AT5G04680.4 | 33.117 | 308 | 186 | 7 | 451 | 745 | 347 | 647 | 8.63e-33 | 135 |
Msa0503540 | AT5G04680.1 | 33.117 | 308 | 186 | 7 | 451 | 745 | 376 | 676 | 1.02e-32 | 135 |
Msa0503540 | AT5G04680.2 | 33.887 | 301 | 179 | 7 | 453 | 740 | 226 | 519 | 1.04e-32 | 134 |
Find 143 sgRNAs with CRISPR-Local
Find 1136 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTATACCCTTGGCCTTTC+AGG | 0.066876 | 3_4:+46817278 | Msa0503540:CDS |
TGAACTTGAGAAAGCAATTT+TGG | 0.137789 | 3_4:+46818073 | Msa0503540:CDS |
TCAACTCTTAAACAAATTTA+TGG | 0.145750 | 3_4:+46817578 | Msa0503540:CDS |
ACACAATGTGCTTGTATTTA+TGG | 0.189985 | 3_4:-46819471 | None:intergenic |
TTCCATGTTAACTTCGTATA+TGG | 0.199761 | 3_4:-46818177 | None:intergenic |
CCATTATTGTTGAGGTATTA+AGG | 0.210047 | 3_4:+46818240 | Msa0503540:CDS |
GATTATATTGATCCACTTAT+AGG | 0.220469 | 3_4:+46816911 | Msa0503540:CDS |
TTTGCTTTGTCTTCAGTAAT+TGG | 0.223129 | 3_4:+46819271 | Msa0503540:CDS |
TTCAGATGGCATTGATATAT+TGG | 0.227193 | 3_4:-46817198 | None:intergenic |
TTGAGGAATTATACAATAAA+AGG | 0.243166 | 3_4:+46805332 | Msa0503540:CDS |
TTTACCAAGGAAACTTCTTT+TGG | 0.277654 | 3_4:+46819375 | Msa0503540:CDS |
TTCCACATTGTCATCATTTA+CGG | 0.277994 | 3_4:-46805447 | None:intergenic |
TAAATCAATTCTGAAATCTT+TGG | 0.278020 | 3_4:-46819356 | None:intergenic |
AAAACTATGTCACATGTCTT+AGG | 0.279000 | 3_4:+46817237 | Msa0503540:CDS |
ATGAATTGGATACCTTGATT+TGG | 0.283810 | 3_4:-46817684 | None:intergenic |
ATTATACAATAAAAGGAAAA+TGG | 0.284628 | 3_4:+46805339 | Msa0503540:CDS |
GTGGCATATAAAATGGTTTC+AGG | 0.287876 | 3_4:+46818406 | Msa0503540:CDS |
CTTTACATTGATCTTCTTAG+AGG | 0.299445 | 3_4:+46819553 | Msa0503540:CDS |
TAACATGTGTCGTAGTTCTT+TGG | 0.306623 | 3_4:-46816866 | None:intergenic |
CCTTAATACCTCAACAATAA+TGG | 0.309058 | 3_4:-46818240 | None:intergenic |
CTTACATGTAAGAATGAAAA+AGG | 0.321199 | 3_4:+46805521 | Msa0503540:CDS |
GGACTGAATCCTTGTTTGTT+TGG | 0.332842 | 3_4:-46807160 | None:intergenic |
AAATGATGTGGCATATAAAA+TGG | 0.339034 | 3_4:+46818399 | Msa0503540:CDS |
GTTCCAATCTCGATCACTTT+TGG | 0.346166 | 3_4:-46818357 | None:intergenic |
CATGAAGAACTGGTACAAAA+AGG | 0.353958 | 3_4:+46819097 | Msa0503540:CDS |
CATCATGAACATTATAGAAA+TGG | 0.361595 | 3_4:+46804483 | Msa0503540:exon |
ACTCACATCTCGTGTTGGTT+TGG | 0.379924 | 3_4:-46817634 | None:intergenic |
TCAGATGGCATTGATATATT+GGG | 0.381140 | 3_4:-46817197 | None:intergenic |
GTTTGAAGAGTGCAATAAAA+AGG | 0.382958 | 3_4:+46818268 | Msa0503540:CDS |
GTAGTAGCAGCACTCCTTGC+CGG | 0.383621 | 3_4:+46819157 | Msa0503540:CDS |
TGAATTGGATACCTTGATTT+GGG | 0.389785 | 3_4:-46817683 | None:intergenic |
TATATTTATATGTATGATGT+TGG | 0.391082 | 3_4:+46819724 | Msa0503540:three_prime_UTR |
TTCCTTTCTAGAAGTGAGTA+TGG | 0.391143 | 3_4:-46819332 | None:intergenic |
TATCTTCCTTATCCATCCCT+TGG | 0.400119 | 3_4:-46818310 | None:intergenic |
ATTGATATTGATAACGAAGA+TGG | 0.400775 | 3_4:+46805632 | Msa0503540:CDS |
TGTTTCTTGCTGCATTGTCT+TGG | 0.401537 | 3_4:+46805666 | Msa0503540:CDS |
TACTTGTAGCAGTTGAAAAC+AGG | 0.401708 | 3_4:+46818213 | Msa0503540:CDS |
AATATATGTGAATGTATCAT+AGG | 0.402918 | 3_4:+46805584 | Msa0503540:CDS |
AAGATCTTATTAGAAGCAAT+GGG | 0.403706 | 3_4:+46805771 | Msa0503540:CDS |
AAACTCAGAGATTAAATTGA+AGG | 0.404675 | 3_4:-46804447 | None:intergenic |
AAAGCGGATGCAAGATGATA+TGG | 0.408283 | 3_4:+46807218 | Msa0503540:CDS |
AATGTTCATGATGGTCTTCA+AGG | 0.409938 | 3_4:-46804473 | None:intergenic |
GGCGGCAACAGAAGTGAAAC+AGG | 0.413726 | 3_4:+46819211 | Msa0503540:CDS |
ATGTCTATTGTGCTAAACTT+AGG | 0.413805 | 3_4:-46805392 | None:intergenic |
GATCGAGATTGGAACATATC+TGG | 0.414209 | 3_4:+46818365 | Msa0503540:CDS |
GTGCCAAAGTCACGTGATAA+GGG | 0.414563 | 3_4:+46819589 | Msa0503540:CDS |
AGTGCCAAAGTCACGTGATA+AGG | 0.414651 | 3_4:+46819588 | Msa0503540:CDS |
GTTCCCAAGTACGATTCATA+TGG | 0.424712 | 3_4:-46817606 | None:intergenic |
ACCCTTGGCCTTTCAGGAGT+TGG | 0.424978 | 3_4:+46817284 | Msa0503540:CDS |
AATCCCAAAAGAAGTTTCCT+TGG | 0.430549 | 3_4:-46819379 | None:intergenic |
CAAGAAATCACATGAAGAAC+TGG | 0.431741 | 3_4:+46819087 | Msa0503540:CDS |
AGATGAAGGAAAAGCACAAA+TGG | 0.442152 | 3_4:+46817550 | Msa0503540:CDS |
GCAAGATGATATGGTGGAAG+AGG | 0.443345 | 3_4:+46807227 | Msa0503540:CDS |
TTTGGAATGTCGATAAGCTC+TGG | 0.443635 | 3_4:-46807142 | None:intergenic |
AAGAAGCAATCGAATATTAT+CGG | 0.444958 | 3_4:+46816807 | Msa0503540:CDS |
CTACCAAAAGTGATCGAGAT+TGG | 0.451436 | 3_4:+46818354 | Msa0503540:CDS |
CTCTAAAACTTCTTGCTACT+AGG | 0.452007 | 3_4:+46807182 | Msa0503540:CDS |
GTTTCACTTCTGTTGCCGCC+TGG | 0.452202 | 3_4:-46819208 | None:intergenic |
GCAGGCCTTCCTTCCAATGC+TGG | 0.454814 | 3_4:-46819238 | None:intergenic |
TGCTTAGCAAAACCTATAAG+TGG | 0.456542 | 3_4:-46816923 | None:intergenic |
AGAACAGTACTACCTATGTT+TGG | 0.456823 | 3_4:+46819667 | Msa0503540:three_prime_UTR |
TATGAATCGTACTTGGGAAC+TGG | 0.457339 | 3_4:+46817609 | Msa0503540:CDS |
GGAGGACATATAAAGTTGTA+TGG | 0.458990 | 3_4:+46819612 | Msa0503540:exon |
TGAAACAGGCGAACCAGCAT+TGG | 0.463366 | 3_4:+46819225 | Msa0503540:CDS |
TATGGTCAATCAGAAAGAAA+TGG | 0.463630 | 3_4:-46819453 | None:intergenic |
ATCACGTGACTTTGGCACTT+TGG | 0.464104 | 3_4:-46819584 | None:intergenic |
AAAGATCTTATTAGAAGCAA+TGG | 0.468204 | 3_4:+46805770 | Msa0503540:CDS |
ATCATGAACATTATAGAAAT+GGG | 0.468633 | 3_4:+46804484 | Msa0503540:exon |
GTTCTAACTGTGAAATGCTC+TGG | 0.475307 | 3_4:-46819031 | None:intergenic |
AAATGGCATAGTTGAAATAG+TGG | 0.476650 | 3_4:+46818127 | Msa0503540:CDS |
AAATCCATATGAATCGTACT+TGG | 0.478104 | 3_4:+46817602 | Msa0503540:CDS |
TTTGCATATATCTATACCCT+TGG | 0.478659 | 3_4:+46817269 | Msa0503540:CDS |
TTGTTGAGGTATTAAGGAAA+CGG | 0.480480 | 3_4:+46818246 | Msa0503540:CDS |
AACAAAGAAGACAAAACAGC+TGG | 0.494490 | 3_4:+46819055 | Msa0503540:CDS |
CTAAGAAGATCAATGTAAAG+TGG | 0.497918 | 3_4:-46819550 | None:intergenic |
CACATGGATCAGTATACTAA+AGG | 0.504814 | 3_4:+46819001 | Msa0503540:intron |
ACTACTTCTAATGCTGCAAA+TGG | 0.506668 | 3_4:+46816965 | Msa0503540:CDS |
GTCCATACTCACTTCTAGAA+AGG | 0.511769 | 3_4:+46819330 | Msa0503540:CDS |
TGAATCCTCTTGATGCTGCA+AGG | 0.512864 | 3_4:-46805559 | None:intergenic |
TCTAATCCAAGGGATGGATA+AGG | 0.517457 | 3_4:+46818304 | Msa0503540:CDS |
CATTTCTATAATGTTCATGA+TGG | 0.518136 | 3_4:-46804482 | None:intergenic |
CTTGATGCTGCAAGGTGCAA+AGG | 0.522226 | 3_4:-46805551 | None:intergenic |
TTCTAGAAGTGAGTATGGAC+AGG | 0.525171 | 3_4:-46819327 | None:intergenic |
GTATTCTTCACTGTGCAATC+CGG | 0.525291 | 3_4:+46805798 | Msa0503540:CDS |
TCTGTTTACAACCCAAATCA+AGG | 0.529246 | 3_4:+46817672 | Msa0503540:CDS |
GGAAGATGCTTGCGTTCAGA+TGG | 0.530670 | 3_4:-46817212 | None:intergenic |
GTTCCACTCACATCTCGTGT+TGG | 0.535441 | 3_4:-46817639 | None:intergenic |
GCGAACCAGCATTGGAAGGA+AGG | 0.537330 | 3_4:+46819233 | Msa0503540:CDS |
GGAAGTTGTTAAAAGTCTTG+TGG | 0.538983 | 3_4:+46805466 | Msa0503540:CDS |
AGTTACACTCTATATGTAGT+TGG | 0.540930 | 3_4:+46804355 | Msa0503540:five_prime_UTR |
AGCGACGAACATTGCAACAA+TGG | 0.549560 | 3_4:-46819419 | None:intergenic |
CAGGAGAACCATTATTGTTG+AGG | 0.553804 | 3_4:+46818232 | Msa0503540:CDS |
ATATTTGATAATCTAATCCA+AGG | 0.560831 | 3_4:+46818293 | Msa0503540:CDS |
TTCTTCACTGTGCAATCCGG+AGG | 0.561055 | 3_4:+46805801 | Msa0503540:CDS |
AAATCAAGTAAAAGCGATTG+TGG | 0.561762 | 3_4:+46805722 | Msa0503540:CDS |
TCATAGGAAAAGATGGTGAA+AGG | 0.561859 | 3_4:+46805600 | Msa0503540:CDS |
TATATGCCACATCATTTGCA+AGG | 0.563049 | 3_4:-46818393 | None:intergenic |
TACCAACTCCTGAAAGGCCA+AGG | 0.563628 | 3_4:-46817286 | None:intergenic |
TTGCACCTTGCAGCATCAAG+AGG | 0.564363 | 3_4:+46805554 | Msa0503540:CDS |
AGGAAAATGGAATAAAGTTG+AGG | 0.567121 | 3_4:+46805352 | Msa0503540:CDS |
GCTACTGCATACAAAGTCAC+AGG | 0.569943 | 3_4:-46819520 | None:intergenic |
AAGTATACTGCTCCAAACAT+AGG | 0.570656 | 3_4:-46819679 | None:intergenic |
ATTTCAGAATTGATTTACCA+AGG | 0.574578 | 3_4:+46819362 | Msa0503540:CDS |
GCTACATCAAGCACTGTACC+AGG | 0.575420 | 3_4:+46819190 | Msa0503540:CDS |
ATATGTATGATGTTGGATTG+TGG | 0.575658 | 3_4:+46819731 | Msa0503540:three_prime_UTR |
AAAGCAAATGCATCAAATGC+AGG | 0.578955 | 3_4:-46819256 | None:intergenic |
GACAATGCAGCAAGAAACAA+AGG | 0.580270 | 3_4:-46805662 | None:intergenic |
TTCCATATACGAAGTTAACA+TGG | 0.586336 | 3_4:+46818175 | Msa0503540:CDS |
TGATAATCTAATCCAAGGGA+TGG | 0.587484 | 3_4:+46818298 | Msa0503540:CDS |
GTGCTGCCTTGCAAATGATG+TGG | 0.592481 | 3_4:+46818387 | Msa0503540:CDS |
GACACTTACCAACTCCTGAA+AGG | 0.593684 | 3_4:-46817292 | None:intergenic |
AATCCATATGAATCGTACTT+GGG | 0.593781 | 3_4:+46817603 | Msa0503540:CDS |
GAATGTATCATAGGAAAAGA+TGG | 0.595958 | 3_4:+46805593 | Msa0503540:CDS |
AAAAGCGATTGTGGTGCTGA+TGG | 0.600448 | 3_4:+46805731 | Msa0503540:CDS |
TACAGTGCTTGATGTAGCGA+AGG | 0.603317 | 3_4:-46819185 | None:intergenic |
ATGACTCATCAGTATACCTG+TGG | 0.604393 | 3_4:+46816769 | Msa0503540:intron |
TGCCAAAGTCACGTGATAAG+GGG | 0.611312 | 3_4:+46819590 | Msa0503540:CDS |
ACAGGCGAACCAGCATTGGA+AGG | 0.613779 | 3_4:+46819229 | Msa0503540:CDS |
AATAAGGGAGAGAAACACAT+AGG | 0.616620 | 3_4:+46817155 | Msa0503540:CDS |
AAAGCGATTGTGGTGCTGAT+GGG | 0.619235 | 3_4:+46805732 | Msa0503540:CDS |
ATCGACATTCCAAACAAACA+AGG | 0.621948 | 3_4:+46807151 | Msa0503540:CDS |
GCCAAAGTCACGTGATAAGG+GGG | 0.625779 | 3_4:+46819591 | Msa0503540:CDS |
AGCAGCACATACATCACGGA+AGG | 0.637337 | 3_4:+46804523 | Msa0503540:CDS |
TGATGTAGCGAAGGAAACAC+CGG | 0.642955 | 3_4:-46819176 | None:intergenic |
TATTTGATAATCTAATCCAA+GGG | 0.643118 | 3_4:+46818294 | Msa0503540:CDS |
AGGCCCTCAGCCTTCAAAAG+CGG | 0.644167 | 3_4:+46807202 | Msa0503540:CDS |
AAACCAACACGAGATGTGAG+TGG | 0.646673 | 3_4:+46817636 | Msa0503540:CDS |
AAGGAAAAGCACAAATGGAG+TGG | 0.647330 | 3_4:+46817555 | Msa0503540:CDS |
TAGCGAAGGAAACACCGGCA+AGG | 0.651641 | 3_4:-46819171 | None:intergenic |
TCTTCACTGTGCAATCCGGA+GGG | 0.652530 | 3_4:+46805802 | Msa0503540:CDS |
CAGAGGAACAGCACTACACG+TGG | 0.654127 | 3_4:+46805424 | Msa0503540:CDS |
TGACAGCAGCACATACATCA+CGG | 0.654763 | 3_4:+46804519 | Msa0503540:CDS |
ACCAACTCCTGAAAGGCCAA+GGG | 0.656443 | 3_4:-46817285 | None:intergenic |
CTACTGCATACAAAGTCACA+GGG | 0.663393 | 3_4:-46819519 | None:intergenic |
ATAGACATCAACAAAAGCAG+AGG | 0.666126 | 3_4:+46805407 | Msa0503540:CDS |
TGACTCATCAGTATACCTGT+GGG | 0.668394 | 3_4:+46816770 | Msa0503540:intron |
GCGGATGCAAGATGATATGG+TGG | 0.674620 | 3_4:+46807221 | Msa0503540:CDS |
TGCAGGAGATAACAACAATG+AGG | 0.675357 | 3_4:+46817998 | Msa0503540:intron |
TGGAACATAACACTAACACA+TGG | 0.680133 | 3_4:+46804375 | Msa0503540:five_prime_UTR |
CAGAGGACAAGCTAAAGTTG+AGG | 0.689208 | 3_4:+46805315 | Msa0503540:intron |
GGCCGTAAATGATGACAATG+TGG | 0.729929 | 3_4:+46805445 | Msa0503540:CDS |
AGATCTTATTAGAAGCAATG+GGG | 0.730221 | 3_4:+46805772 | Msa0503540:CDS |
ACATCAAGCACTGTACCAGG+CGG | 0.758516 | 3_4:+46819193 | Msa0503540:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTATGAATTTTGTATTT+GGG | + | chr3_4:46805874-46805893 | Msa0503540:intron | 10.0% |
!! | TATCTTATTAATCTATAATA+AGG | - | chr3_4:46806340-46806359 | None:intergenic | 10.0% |
!! | AATAATTACAAAAATATCTA+CGG | + | chr3_4:46807662-46807681 | Msa0503540:intron | 10.0% |
!!! | AACTAAAATTTGATTTATTT+TGG | + | chr3_4:46807948-46807967 | Msa0503540:intron | 10.0% |
!!! | ACAAAAAGTTTTAAATTTTT+AGG | + | chr3_4:46808176-46808195 | Msa0503540:intron | 10.0% |
!!! | AACTAAAATTTGATTTATTT+TGG | - | chr3_4:46807948-46807967 | None:intergenic | 10.0% |
!!! | TATATTGATAATATTAATGA+GGG | - | chr3_4:46809465-46809484 | None:intergenic | 10.0% |
!!! | TTAAATATTTCTATAAACAA+AGG | + | chr3_4:46809508-46809527 | Msa0503540:intron | 10.0% |
!!! | TAAATATTTCTATAAACAAA+GGG | + | chr3_4:46809509-46809528 | Msa0503540:intron | 10.0% |
!!! | ATTGCATTTTATTATATTTT+AGG | - | chr3_4:46810762-46810781 | None:intergenic | 10.0% |
!! | TAAATTGTTAAAGTTATAAT+GGG | - | chr3_4:46811518-46811537 | None:intergenic | 10.0% |
!!! | TATTTTTACTAAAAATAAGT+TGG | - | chr3_4:46813410-46813429 | None:intergenic | 10.0% |
!!! | ATTGCATTTTATTATATTTT+AGG | - | chr3_4:46810762-46810781 | None:intergenic | 10.0% |
!!! | TTTATTAATAATTTTAACAC+CGG | + | chr3_4:46818718-46818737 | Msa0503540:intron | 10.0% |
!! | ATTGACTAATATAAAAGTAA+AGG | + | chr3_4:46804857-46804876 | Msa0503540:intron | 15.0% |
!!! | TTTTAACAAGATAAAAGTAA+AGG | + | chr3_4:46804889-46804908 | Msa0503540:intron | 15.0% |
!! | TTACTACTTGAAAAAAAAAA+TGG | - | chr3_4:46805260-46805279 | None:intergenic | 15.0% |
!! | ATTATACAATAAAAGGAAAA+TGG | + | chr3_4:46805339-46805358 | Msa0503540:CDS | 15.0% |
!!! | CATATTATGAATTTTGTATT+TGG | + | chr3_4:46805873-46805892 | Msa0503540:intron | 15.0% |
!!! | ATTTTGATTTTTTACATTCA+TGG | - | chr3_4:46806029-46806048 | None:intergenic | 15.0% |
!! | AAGATAAAAAAAAAATTGCA+TGG | + | chr3_4:46806270-46806289 | Msa0503540:intron | 15.0% |
!! | AGATAAAAAAAAAATTGCAT+GGG | + | chr3_4:46806271-46806290 | Msa0503540:intron | 15.0% |
!! | CAATATACATAAATATTAGT+AGG | - | chr3_4:46807042-46807061 | None:intergenic | 15.0% |
!!! | TTTTTAATGAATTTTGTCAA+TGG | - | chr3_4:46807425-46807444 | None:intergenic | 15.0% |
!!! | TATCCATTAATATTTTAAAG+TGG | + | chr3_4:46807619-46807638 | Msa0503540:intron | 15.0% |
!!! | ATAAATCAAATTTTAGTTAG+AGG | - | chr3_4:46809100-46809119 | None:intergenic | 15.0% |
!!! | CGTTTTTTTAATAAAACTAA+CGG | - | chr3_4:46809034-46809053 | None:intergenic | 15.0% |
!!! | AGTTTTATTAAAAAAACGTT+AGG | + | chr3_4:46808014-46808033 | Msa0503540:intron | 15.0% |
!!! | GTTTTATTAAAAAAACGTTA+GGG | + | chr3_4:46808015-46808034 | Msa0503540:intron | 15.0% |
!! | GATTCATTAAGAAATTATTT+GGG | - | chr3_4:46808704-46808723 | None:intergenic | 15.0% |
!! | AGATTCATTAAGAAATTATT+TGG | - | chr3_4:46808705-46808724 | None:intergenic | 15.0% |
!!! | AATCTTGATTGTTAAATTTT+CGG | + | chr3_4:46808720-46808739 | Msa0503540:intron | 15.0% |
!! | AAATTTGTATTATCAAATTC+TGG | - | chr3_4:46808978-46808997 | None:intergenic | 15.0% |
!!! | GTTTTATTAAAAAAACGTTA+GGG | - | chr3_4:46808015-46808034 | None:intergenic | 15.0% |
!!! | AGTTTTATTAAAAAAACGTT+AGG | - | chr3_4:46808014-46808033 | None:intergenic | 15.0% |
!!! | CGTTTTTTTAATAAAACTAA+CGG | + | chr3_4:46809034-46809053 | Msa0503540:intron | 15.0% |
!!! | ATAAATCAAATTTTAGTTAG+AGG | + | chr3_4:46809100-46809119 | Msa0503540:intron | 15.0% |
!! | CTTAACTATTTAATTAGTAT+CGG | - | chr3_4:46809132-46809151 | None:intergenic | 15.0% |
!!! | GATTATTTCTAAAGAAAAAA+GGG | - | chr3_4:46809239-46809258 | None:intergenic | 15.0% |
!!! | AGATTATTTCTAAAGAAAAA+AGG | - | chr3_4:46809240-46809259 | None:intergenic | 15.0% |
!! | GTAAAGTAATCTTATAAAAA+TGG | - | chr3_4:46809269-46809288 | None:intergenic | 15.0% |
!!! | ATATTGATAATATTAATGAG+GGG | - | chr3_4:46809464-46809483 | None:intergenic | 15.0% |
!!! | GTATATTGATAATATTAATG+AGG | - | chr3_4:46809466-46809485 | None:intergenic | 15.0% |
!!! | TATTAACTTTTCATATATCA+AGG | - | chr3_4:46809488-46809507 | None:intergenic | 15.0% |
!! | TGTAAACTATTCATATAAAA+AGG | + | chr3_4:46809605-46809624 | Msa0503540:intron | 15.0% |
!! | GTAAACTATTCATATAAAAA+GGG | + | chr3_4:46809606-46809625 | Msa0503540:intron | 15.0% |
!!! | ATATTTTAGGAAAGAATATA+TGG | - | chr3_4:46810749-46810768 | None:intergenic | 15.0% |
!! | AAATTGTTAAAGTTATAATG+GGG | - | chr3_4:46811517-46811536 | None:intergenic | 15.0% |
!! | CTAAATTGTTAAAGTTATAA+TGG | - | chr3_4:46811519-46811538 | None:intergenic | 15.0% |
!! | AAATAAAAGAATAAAGTTCA+AGG | + | chr3_4:46811872-46811891 | Msa0503540:intron | 15.0% |
!! | AATAAAAGAATAAAGTTCAA+GGG | + | chr3_4:46811873-46811892 | Msa0503540:intron | 15.0% |
!!! | ATTTTGAATTAGATAACATT+AGG | - | chr3_4:46814996-46815015 | None:intergenic | 15.0% |
!!! | ATATTTTAGGAAAGAATATA+TGG | - | chr3_4:46810749-46810768 | None:intergenic | 15.0% |
!! | AACAATTTCATTTATATTTG+AGG | + | chr3_4:46817743-46817762 | Msa0503540:intron | 15.0% |
!!! | TGTAATATTGATTTGATTTT+TGG | - | chr3_4:46817947-46817966 | None:intergenic | 15.0% |
!!! | AATGTTGTTATTTTTTTTGA+AGG | - | chr3_4:46818027-46818046 | None:intergenic | 15.0% |
!!! | TATTTCTTTTCTTTCAAATT+AGG | + | chr3_4:46818429-46818448 | Msa0503540:intron | 15.0% |
!! | TATATTTATATGTATGATGT+TGG | + | chr3_4:46819724-46819743 | Msa0503540:three_prime_UTR | 15.0% |
!! | TATAAAAAAAGAAGTTATCA+CGG | + | chr3_4:46819780-46819799 | Msa0503540:three_prime_UTR | 15.0% |
!! | ATCATGAACATTATAGAAAT+GGG | + | chr3_4:46804484-46804503 | Msa0503540:exon | 20.0% |
!! | TGTTACCAATGAAAAATAAT+TGG | + | chr3_4:46804560-46804579 | Msa0503540:intron | 20.0% |
!!! | CATAACCAATTATTTTTCAT+TGG | - | chr3_4:46804568-46804587 | None:intergenic | 20.0% |
!!! | GTTAAAAAAGGTGAAAATTT+TGG | + | chr3_4:46804759-46804778 | Msa0503540:intron | 20.0% |
!! | TAAAAGTAGTCTTCAATTAT+AGG | - | chr3_4:46804786-46804805 | None:intergenic | 20.0% |
!! | GATTAAAGAAGTTAAACTAT+TGG | - | chr3_4:46804831-46804850 | None:intergenic | 20.0% |
!!! | TAAAAGTAAAGGTATTGATT+TGG | + | chr3_4:46804900-46804919 | Msa0503540:intron | 20.0% |
!! | ACATTTCAAATTGAGTTAAT+CGG | - | chr3_4:46805290-46805309 | None:intergenic | 20.0% |
!! | TTGAGGAATTATACAATAAA+AGG | + | chr3_4:46805332-46805351 | Msa0503540:CDS | 20.0% |
!!! | TTTTTCATTCTTACATGTAA+GGG | - | chr3_4:46805522-46805541 | None:intergenic | 20.0% |
!! | AATATATGTGAATGTATCAT+AGG | + | chr3_4:46805584-46805603 | Msa0503540:CDS | 20.0% |
!!! | ATTTTGATTTTTCACATTGA+TGG | + | chr3_4:46805987-46806006 | Msa0503540:intron | 20.0% |
!!! | TAATAACCCACATTTTTATT+TGG | + | chr3_4:46806243-46806262 | Msa0503540:intron | 20.0% |
!! | AAGATAATACCTTATTATGA+TGG | + | chr3_4:46806354-46806373 | Msa0503540:intron | 20.0% |
!! | AGATAATACCTTATTATGAT+GGG | + | chr3_4:46806355-46806374 | Msa0503540:intron | 20.0% |
!! | GTTTATGAATGTGTAAAATA+TGG | - | chr3_4:46806779-46806798 | None:intergenic | 20.0% |
!!! | TTGCATTTTTCTTTCTAAAT+AGG | - | chr3_4:46806895-46806914 | None:intergenic | 20.0% |
!!! | AATGTTTAAGATGAACATAA+TGG | - | chr3_4:46807541-46807560 | None:intergenic | 20.0% |
!! | TCTAATTTATAAACCACTTA+AGG | + | chr3_4:46807572-46807591 | Msa0503540:intron | 20.0% |
!!! | ACACCACTTTAAAATATTAA+TGG | - | chr3_4:46807625-46807644 | None:intergenic | 20.0% |
!!! | GTATCGACAAATAAAATTAT+TGG | - | chr3_4:46807709-46807728 | None:intergenic | 20.0% |
!! | TTTATATTATGACAAAGTCA+AGG | - | chr3_4:46807784-46807803 | None:intergenic | 20.0% |
!!! | TTTTATCCTTTTTCCTTTTA+AGG | + | chr3_4:46807837-46807856 | Msa0503540:intron | 20.0% |
!! | AGCCAAAAAAAATTATTTGT+GGG | - | chr3_4:46807877-46807896 | None:intergenic | 20.0% |
!! | TAGCCAAAAAAAATTATTTG+TGG | - | chr3_4:46807878-46807897 | None:intergenic | 20.0% |
!! | CGATACTAATTAATAGTTAA+GGG | - | chr3_4:46807916-46807935 | None:intergenic | 20.0% |
!! | CCTTAACTATTAATTAGTAT+CGG | + | chr3_4:46807914-46807933 | Msa0503540:intron | 20.0% |
!!! | TTTTAATAAAACTAACGGAA+AGG | - | chr3_4:46809039-46809058 | None:intergenic | 20.0% |
!!! | TATAGAGTATTGTAATAGAA+TGG | + | chr3_4:46808225-46808244 | Msa0503540:intron | 20.0% |
!!! | ATAGAGTATTGTAATAGAAT+GGG | + | chr3_4:46808226-46808245 | Msa0503540:intron | 20.0% |
!!! | ATTATCAAATTCTGGAAAAT+AGG | - | chr3_4:46808970-46808989 | None:intergenic | 20.0% |
!!! | TTTTAATAAAACTAACGGAA+AGG | + | chr3_4:46809039-46809058 | Msa0503540:intron | 20.0% |
!! | AGGTGAGATAAAAAAAAAAA+AGG | - | chr3_4:46809175-46809194 | None:intergenic | 20.0% |
!! | AAGAAGAAAGATTATGAAAT+AGG | + | chr3_4:46809812-46809831 | Msa0503540:intron | 20.0% |
!! | AGAAGAAAGATTATGAAATA+GGG | + | chr3_4:46809813-46809832 | Msa0503540:intron | 20.0% |
!! | AATAATAATAAAAGAGCCTT+GGG | + | chr3_4:46809860-46809879 | Msa0503540:intron | 20.0% |
!! | TGAATCTAGATTAGAAATTA+GGG | + | chr3_4:46810268-46810287 | Msa0503540:intron | 20.0% |
!! | TTGAAGTAAAAGATTCAAAA+AGG | + | chr3_4:46810782-46810801 | Msa0503540:intron | 20.0% |
!!! | TTTTACTCTAAAGACTTTAA+AGG | + | chr3_4:46811590-46811609 | Msa0503540:intron | 20.0% |
!!! | TTTACTCTAAAGACTTTAAA+GGG | + | chr3_4:46811591-46811610 | Msa0503540:intron | 20.0% |
!!! | CTTGTTTTCAATGTAAAATA+TGG | - | chr3_4:46811822-46811841 | None:intergenic | 20.0% |
!!! | TATTTTGTTTTTATAGCAAG+AGG | - | chr3_4:46811857-46811876 | None:intergenic | 20.0% |
!! | TAATAATTCTCCATTCATAT+TGG | + | chr3_4:46812450-46812469 | Msa0503540:intron | 20.0% |
!! | TTCAATTGTTAAAAAGAAAC+TGG | - | chr3_4:46812638-46812657 | None:intergenic | 20.0% |
!! | TAATAGCAAATGTTATATGA+TGG | + | chr3_4:46812676-46812695 | Msa0503540:intron | 20.0% |
!! | TGATGAAATTTATAGTAATG+AGG | + | chr3_4:46812988-46813007 | Msa0503540:intron | 20.0% |
!! | GATGAAATTTATAGTAATGA+GGG | + | chr3_4:46812989-46813008 | Msa0503540:intron | 20.0% |
!!! | TAATTTTTCTTCAAAAACAC+TGG | + | chr3_4:46814187-46814206 | Msa0503540:intron | 20.0% |
!!! | TTTGTTTTAAGTTGTTTTGT+AGG | - | chr3_4:46814307-46814326 | None:intergenic | 20.0% |
!!! | TGTAAAGCTTATGAAATTTT+TGG | - | chr3_4:46815207-46815226 | None:intergenic | 20.0% |
!! | AAAATTTCATAAGCTTTACA+AGG | + | chr3_4:46815207-46815226 | Msa0503540:intron | 20.0% |
!! | AAGAAGAAAGATTATGAAAT+AGG | + | chr3_4:46809812-46809831 | Msa0503540:intron | 20.0% |
!! | AGAAGAAAGATTATGAAATA+GGG | + | chr3_4:46809813-46809832 | Msa0503540:intron | 20.0% |
!! | AATAATAATAAAAGAGCCTT+GGG | + | chr3_4:46809860-46809879 | Msa0503540:intron | 20.0% |
!! | TGAATCTAGATTAGAAATTA+GGG | + | chr3_4:46810268-46810287 | Msa0503540:intron | 20.0% |
!! | TTGAAGTAAAAGATTCAAAA+AGG | + | chr3_4:46810782-46810801 | Msa0503540:intron | 20.0% |
!! | TCTTTCTTATATAAGTATGT+TGG | + | chr3_4:46817001-46817020 | Msa0503540:intron | 20.0% |
!!! | AATTTAAGTTATGTTTTTGC+AGG | + | chr3_4:46817125-46817144 | Msa0503540:intron | 20.0% |
!! | TGAAGAAATAAAAAAGATGA+AGG | + | chr3_4:46817536-46817555 | Msa0503540:CDS | 20.0% |
!! | TCAACTCTTAAACAAATTTA+TGG | + | chr3_4:46817578-46817597 | Msa0503540:CDS | 20.0% |
!! | ATTTCATTTATATTTGAGGA+TGG | + | chr3_4:46817747-46817766 | Msa0503540:intron | 20.0% |
!!! | ATGATTTTGATTTGATCATA+AGG | + | chr3_4:46817775-46817794 | Msa0503540:intron | 20.0% |
!!! | TGATTTTGATTTGATCATAA+GGG | + | chr3_4:46817776-46817795 | Msa0503540:intron | 20.0% |
!! | ATATTATAAATGAAACTTGC+AGG | + | chr3_4:46817981-46818000 | Msa0503540:intron | 20.0% |
!! | CAAAAAAAATAACAACATTG+AGG | + | chr3_4:46818028-46818047 | Msa0503540:CDS | 20.0% |
!!! | ATATTTGATAATCTAATCCA+AGG | + | chr3_4:46818293-46818312 | Msa0503540:CDS | 20.0% |
!!! | TATTTGATAATCTAATCCAA+GGG | + | chr3_4:46818294-46818313 | Msa0503540:CDS | 20.0% |
!!! | TTTTGAAATGTGCATTATTT+TGG | - | chr3_4:46818490-46818509 | None:intergenic | 20.0% |
!! | AAAGTAAAAAAATGTCTTCT+GGG | - | chr3_4:46818699-46818718 | None:intergenic | 20.0% |
!! | AAAAGTAAAAAAATGTCTTC+TGG | - | chr3_4:46818700-46818719 | None:intergenic | 20.0% |
!! | TTAGTGTTAAAAATAAGTGT+TGG | - | chr3_4:46818828-46818847 | None:intergenic | 20.0% |
!!! | TAAATCAATTCTGAAATCTT+TGG | - | chr3_4:46819359-46819378 | None:intergenic | 20.0% |
!! | ATAAAAAAAGAAGTTATCAC+GGG | + | chr3_4:46819781-46819800 | Msa0503540:three_prime_UTR | 20.0% |
! | AAACTCAGAGATTAAATTGA+AGG | - | chr3_4:46804450-46804469 | None:intergenic | 25.0% |
! | CATTTCTATAATGTTCATGA+TGG | - | chr3_4:46804485-46804504 | None:intergenic | 25.0% |
! | CATCATGAACATTATAGAAA+TGG | + | chr3_4:46804483-46804502 | Msa0503540:exon | 25.0% |
!! | TCATATAGTAGAGTATTATC+CGG | - | chr3_4:46804612-46804631 | None:intergenic | 25.0% |
! | TTAGTCGTCATAGTTAAAAA+AGG | + | chr3_4:46804747-46804766 | Msa0503540:intron | 25.0% |
! | TATTGGCAAATAGTATAAAC+AGG | - | chr3_4:46804814-46804833 | None:intergenic | 25.0% |
! | CAATCTACTATTAAAACAAG+TGG | - | chr3_4:46805080-46805099 | None:intergenic | 25.0% |
!!! | CATGTCTTAAGTTGTTTTTA+GGG | - | chr3_4:46805179-46805198 | None:intergenic | 25.0% |
!!! | ACATGTCTTAAGTTGTTTTT+AGG | - | chr3_4:46805180-46805199 | None:intergenic | 25.0% |
!! | TTAAGTTGTTTATCCAAACA+AGG | + | chr3_4:46805221-46805240 | Msa0503540:intron | 25.0% |
! | AATTAGAGTTATTCCTTGTT+TGG | - | chr3_4:46805237-46805256 | None:intergenic | 25.0% |
!!! | CTTTTTCATTCTTACATGTA+AGG | - | chr3_4:46805523-46805542 | None:intergenic | 25.0% |
! | CTTACATGTAAGAATGAAAA+AGG | + | chr3_4:46805521-46805540 | Msa0503540:CDS | 25.0% |
!!! | ATTGATATTGATAACGAAGA+TGG | + | chr3_4:46805632-46805651 | Msa0503540:CDS | 25.0% |
! | AAAGATCTTATTAGAAGCAA+TGG | + | chr3_4:46805770-46805789 | Msa0503540:CDS | 25.0% |
! | AAGATCTTATTAGAAGCAAT+GGG | + | chr3_4:46805771-46805790 | Msa0503540:CDS | 25.0% |
! | TCATAATATGAAGCAAAACA+TGG | - | chr3_4:46805863-46805882 | None:intergenic | 25.0% |
! | GAATTCATGAATTTCTATGT+CGG | + | chr3_4:46806133-46806152 | Msa0503540:intron | 25.0% |
! | TTTCCACCAAATAAAAATGT+GGG | - | chr3_4:46806252-46806271 | None:intergenic | 25.0% |
! | AAAGGATTATATATGATCTG+TGG | + | chr3_4:46806304-46806323 | Msa0503540:intron | 25.0% |
! | AAGGATTATATATGATCTGT+GGG | + | chr3_4:46806305-46806324 | Msa0503540:intron | 25.0% |
! | ATACATTTCCCATCATAATA+AGG | - | chr3_4:46806366-46806385 | None:intergenic | 25.0% |
! | AAAATATGGATGTACAAGAA+AGG | - | chr3_4:46806765-46806784 | None:intergenic | 25.0% |
! | TTACACATTCATAAACAATG+TGG | + | chr3_4:46806783-46806802 | Msa0503540:intron | 25.0% |
! | TACACATTCATAAACAATGT+GGG | + | chr3_4:46806784-46806803 | Msa0503540:intron | 25.0% |
! | ATAATGCTCAAATAAGCTAA+TGG | + | chr3_4:46806857-46806876 | Msa0503540:intron | 25.0% |
! | TATGTATATTGCAACAGATT+TGG | + | chr3_4:46807051-46807070 | Msa0503540:intron | 25.0% |
!! | ACATTACTATCTGAAACATA+TGG | + | chr3_4:46807292-46807311 | Msa0503540:intron | 25.0% |
! | AAGTGGTTTATAAATTAGAG+TGG | - | chr3_4:46807571-46807590 | None:intergenic | 25.0% |
!!! | AGCCCACAAATAATTTTTTT+TGG | + | chr3_4:46807872-46807891 | Msa0503540:intron | 25.0% |
!!! | TTTTGGCTAAATTGCTTTTT+TGG | + | chr3_4:46807889-46807908 | Msa0503540:intron | 25.0% |
! | CCGATACTAATTAATAGTTA+AGG | - | chr3_4:46807917-46807936 | None:intergenic | 25.0% |
!!! | ACTATTAATTAGTATCGGTT+TGG | + | chr3_4:46807919-46807938 | Msa0503540:intron | 25.0% |
! | GTGTTGTATAAATGAGATAT+GGG | - | chr3_4:46808158-46808177 | None:intergenic | 25.0% |
! | TGTGTTGTATAAATGAGATA+TGG | - | chr3_4:46808159-46808178 | None:intergenic | 25.0% |
! | TCTATAACAAGAAGAAGAAT+CGG | - | chr3_4:46808211-46808230 | None:intergenic | 25.0% |
!!! | GGGTTTCAATTTTAACTTAT+GGG | - | chr3_4:46808684-46808703 | None:intergenic | 25.0% |
!!! | TGGGTTTCAATTTTAACTTA+TGG | - | chr3_4:46808685-46808704 | None:intergenic | 25.0% |
!!! | CTATTTAATTAGTATCGGTT+TGG | - | chr3_4:46809127-46809146 | None:intergenic | 25.0% |
!!! | AAAAGGCTAAATTGCTTTTT+TGG | - | chr3_4:46809158-46809177 | None:intergenic | 25.0% |
! | TCTATAAACAAAGGGTAATT+TGG | + | chr3_4:46809517-46809536 | Msa0503540:intron | 25.0% |
! | TGAATAGTTTACAAAAATCG+TGG | - | chr3_4:46809598-46809617 | None:intergenic | 25.0% |
! | ATTCATATAAAAAGGGACAA+AGG | + | chr3_4:46809613-46809632 | Msa0503540:intron | 25.0% |
! | GAAGAAAGATTATGAAATAG+GGG | + | chr3_4:46809814-46809833 | Msa0503540:intron | 25.0% |
! | AAGAAAGATTATGAAATAGG+GGG | + | chr3_4:46809815-46809834 | Msa0503540:intron | 25.0% |
! | CAATAATAATAAAAGAGCCT+TGG | + | chr3_4:46809859-46809878 | Msa0503540:intron | 25.0% |
! | GACTTAAACATCTAATTTCA+TGG | + | chr3_4:46809923-46809942 | Msa0503540:intron | 25.0% |
! | GATTAACAATTATCAAACTG+TGG | - | chr3_4:46810235-46810254 | None:intergenic | 25.0% |
! | GTGAATCTAGATTAGAAATT+AGG | + | chr3_4:46810267-46810286 | Msa0503540:intron | 25.0% |
! | ATTAGGGTTACATAGAAATT+AGG | + | chr3_4:46810284-46810303 | Msa0503540:intron | 25.0% |
! | TTAGGGTTACATAGAAATTA+GGG | + | chr3_4:46810285-46810304 | Msa0503540:intron | 25.0% |
!! | AAACATTCATCTTTTGTTCT+TGG | - | chr3_4:46810459-46810478 | None:intergenic | 25.0% |
! | CAAAAGATGAATGTTTATGA+TGG | + | chr3_4:46810463-46810482 | Msa0503540:intron | 25.0% |
! | TTAGAAACTAAGCTACTATA+AGG | + | chr3_4:46810518-46810537 | Msa0503540:intron | 25.0% |
! | TAGAAACTAAGCTACTATAA+GGG | + | chr3_4:46810519-46810538 | Msa0503540:intron | 25.0% |
!!! | TTTTAGGAAAGAATATATGG+TGG | - | chr3_4:46810746-46810765 | None:intergenic | 25.0% |
! | CAGCAACTAAAAGATTATAA+TGG | + | chr3_4:46810945-46810964 | Msa0503540:intron | 25.0% |
! | TCATAATATCTGTCTTATAC+AGG | - | chr3_4:46811112-46811131 | None:intergenic | 25.0% |
! | TGTATAAGACAGATATTATG+AGG | + | chr3_4:46811111-46811130 | Msa0503540:intron | 25.0% |
! | CTCTTATATGAAATGAAGAA+AGG | - | chr3_4:46811177-46811196 | None:intergenic | 25.0% |
! | TTCATTTCATATAAGAGTGA+TGG | + | chr3_4:46811180-46811199 | Msa0503540:intron | 25.0% |
! | TCATTTCATATAAGAGTGAT+GGG | + | chr3_4:46811181-46811200 | Msa0503540:intron | 25.0% |
! | TAGATTAACAATTAAGCACA+AGG | + | chr3_4:46811224-46811243 | Msa0503540:intron | 25.0% |
! | AGATTAACAATTAAGCACAA+GGG | + | chr3_4:46811225-46811244 | Msa0503540:intron | 25.0% |
! | AAACAAATTCATCAATGCTA+GGG | - | chr3_4:46811408-46811427 | None:intergenic | 25.0% |
!! | TGATGAATTTGTTTCACTTT+AGG | + | chr3_4:46811414-46811433 | Msa0503540:intron | 25.0% |
!! | TTTCACTTTAGGTTCAAATT+AGG | + | chr3_4:46811425-46811444 | Msa0503540:intron | 25.0% |
!! | TTCACTTTAGGTTCAAATTA+GGG | + | chr3_4:46811426-46811445 | Msa0503540:intron | 25.0% |
!! | GTGTATGATTAGGTATTTTA+AGG | - | chr3_4:46811647-46811666 | None:intergenic | 25.0% |
! | TTTCACAATAAAACAAGATG+TGG | + | chr3_4:46811709-46811728 | Msa0503540:intron | 25.0% |
! | TTCACAATAAAACAAGATGT+GGG | + | chr3_4:46811710-46811729 | Msa0503540:intron | 25.0% |
!!! | TTGTTTTGTCTCTTCTTTAA+AGG | - | chr3_4:46811788-46811807 | None:intergenic | 25.0% |
! | AATAAAAGAAGAAGAAGAAG+AGG | + | chr3_4:46811985-46812004 | Msa0503540:intron | 25.0% |
! | TTTGATTATTCTACCTAATC+CGG | - | chr3_4:46812420-46812439 | None:intergenic | 25.0% |
! | TTAGGAAGTAAAAACATGAT+AGG | + | chr3_4:46812924-46812943 | Msa0503540:intron | 25.0% |
! | CATATTCAAAGTATGAGAAT+CGG | + | chr3_4:46813540-46813559 | Msa0503540:intron | 25.0% |
! | ATATTCAAAGTATGAGAATC+GGG | + | chr3_4:46813541-46813560 | Msa0503540:intron | 25.0% |
!!! | TTGGAGTTTATGTTTTAGTA+AGG | + | chr3_4:46813800-46813819 | Msa0503540:intron | 25.0% |
!!! | TTATGTTTTAGTAAGGTTGA+TGG | + | chr3_4:46813807-46813826 | Msa0503540:intron | 25.0% |
!!! | TATGTTTTAGTAAGGTTGAT+GGG | + | chr3_4:46813808-46813827 | Msa0503540:intron | 25.0% |
!! | TTTAATGGAGAATAAGGTTT+TGG | + | chr3_4:46813871-46813890 | Msa0503540:intron | 25.0% |
!!! | ATAAGGTTTTGGTGAATTAT+AGG | + | chr3_4:46813882-46813901 | Msa0503540:intron | 25.0% |
!! | TTTTGGTGAATTATAGGTTT+GGG | + | chr3_4:46813888-46813907 | Msa0503540:intron | 25.0% |
!!! | TGGATGAAAGTTATTTTTGA+TGG | + | chr3_4:46813911-46813930 | Msa0503540:intron | 25.0% |
!!! | GGATGAAAGTTATTTTTGAT+GGG | + | chr3_4:46813912-46813931 | Msa0503540:intron | 25.0% |
! | AGAAAAATTGGGTTTATAGA+AGG | + | chr3_4:46814099-46814118 | Msa0503540:intron | 25.0% |
!! | AGTTTTTCTTGAATCATACT+TGG | + | chr3_4:46814274-46814293 | Msa0503540:intron | 25.0% |
! | CAAATTGTCATCTAAACTTA+AGG | - | chr3_4:46814548-46814567 | None:intergenic | 25.0% |
!!! | AAATGAATTTTTGGCTCATA+TGG | + | chr3_4:46814634-46814653 | Msa0503540:intron | 25.0% |
! | AATAAATGCTATTACACCTA+GGG | - | chr3_4:46814779-46814798 | None:intergenic | 25.0% |
! | TAGGTGTAATAGCATTTATT+GGG | + | chr3_4:46814779-46814798 | Msa0503540:intron | 25.0% |
! | GAAGAAAGATTATGAAATAG+GGG | + | chr3_4:46809814-46809833 | Msa0503540:intron | 25.0% |
! | AAGAAAGATTATGAAATAGG+GGG | + | chr3_4:46809815-46809834 | Msa0503540:intron | 25.0% |
! | CAATAATAATAAAAGAGCCT+TGG | + | chr3_4:46809859-46809878 | Msa0503540:intron | 25.0% |
! | GACTTAAACATCTAATTTCA+TGG | + | chr3_4:46809923-46809942 | Msa0503540:intron | 25.0% |
! | GATTAACAATTATCAAACTG+TGG | - | chr3_4:46810235-46810254 | None:intergenic | 25.0% |
! | GTGAATCTAGATTAGAAATT+AGG | + | chr3_4:46810267-46810286 | Msa0503540:intron | 25.0% |
! | ATTAGGGTTACATAGAAATT+AGG | + | chr3_4:46810284-46810303 | Msa0503540:intron | 25.0% |
! | TTAGGGTTACATAGAAATTA+GGG | + | chr3_4:46810285-46810304 | Msa0503540:intron | 25.0% |
!! | AAACATTCATCTTTTGTTCT+TGG | - | chr3_4:46810459-46810478 | None:intergenic | 25.0% |
! | CAAAAGATGAATGTTTATGA+TGG | + | chr3_4:46810463-46810482 | Msa0503540:intron | 25.0% |
! | TTAGAAACTAAGCTACTATA+AGG | + | chr3_4:46810518-46810537 | Msa0503540:intron | 25.0% |
! | TAGAAACTAAGCTACTATAA+GGG | + | chr3_4:46810519-46810538 | Msa0503540:intron | 25.0% |
!!! | TTTTAGGAAAGAATATATGG+TGG | - | chr3_4:46810746-46810765 | None:intergenic | 25.0% |
! | AAGAAGCAATCGAATATTAT+CGG | + | chr3_4:46816807-46816826 | Msa0503540:CDS | 25.0% |
!! | TTCTTTGGACATAATTTTTG+TGG | - | chr3_4:46816854-46816873 | None:intergenic | 25.0% |
! | GATTATATTGATCCACTTAT+AGG | + | chr3_4:46816911-46816930 | Msa0503540:CDS | 25.0% |
!! | TTTTGCAGGATCTAAAAATA+AGG | + | chr3_4:46817139-46817158 | Msa0503540:intron | 25.0% |
! | TTTGCAGGATCTAAAAATAA+GGG | + | chr3_4:46817140-46817159 | Msa0503540:intron | 25.0% |
! | TTTAGATAATGAGATCAACT+AGG | - | chr3_4:46817322-46817341 | None:intergenic | 25.0% |
!!! | ACTCAAATATTTTTTATCCG+AGG | - | chr3_4:46817366-46817385 | None:intergenic | 25.0% |
! | CATAAAACAATAACAACCAA+GGG | - | chr3_4:46817488-46817507 | None:intergenic | 25.0% |
!! | TGTGTTCAAAATTTGCTTAA+AGG | + | chr3_4:46817510-46817529 | Msa0503540:intron | 25.0% |
!! | GTGTTCAAAATTTGCTTAAA+GGG | + | chr3_4:46817511-46817530 | Msa0503540:intron | 25.0% |
!! | TGTTCAAAATTTGCTTAAAG+GGG | + | chr3_4:46817512-46817531 | Msa0503540:intron | 25.0% |
!!! | GATTTTGATTTGATCATAAG+GGG | + | chr3_4:46817777-46817796 | Msa0503540:intron | 25.0% |
!!! | CAAGTTTTGTAGAAATCTTT+GGG | - | chr3_4:46818055-46818074 | None:intergenic | 25.0% |
!!! | TCAAGTTTTGTAGAAATCTT+TGG | - | chr3_4:46818056-46818075 | None:intergenic | 25.0% |
! | AAATGATGTGGCATATAAAA+TGG | + | chr3_4:46818399-46818418 | Msa0503540:CDS | 25.0% |
! | CAAAATATCAAACTTGAATC+TGG | + | chr3_4:46818505-46818524 | Msa0503540:intron | 25.0% |
! | TGTATATGTGTTTGCAATTT+GGG | + | chr3_4:46818567-46818586 | Msa0503540:intron | 25.0% |
!!! | TTAGACCCACTAAATTTTTT+TGG | + | chr3_4:46818665-46818684 | Msa0503540:intron | 25.0% |
! | CATCTCCAAAAAAATTTAGT+GGG | - | chr3_4:46818673-46818692 | None:intergenic | 25.0% |
! | TCATCTCCAAAAAAATTTAG+TGG | - | chr3_4:46818674-46818693 | None:intergenic | 25.0% |
!!! | AAGACTATGACGATTTTTTT+AGG | - | chr3_4:46818788-46818807 | None:intergenic | 25.0% |
! | AAAAAAATCGTCATAGTCTT+TGG | + | chr3_4:46818788-46818807 | Msa0503540:intron | 25.0% |
!! | ATTTCAGAATTGATTTACCA+AGG | + | chr3_4:46819362-46819381 | Msa0503540:CDS | 25.0% |
AGTTACACTCTATATGTAGT+TGG | + | chr3_4:46804355-46804374 | Msa0503540:five_prime_UTR | 30.0% | |
AATAGTTGAAAATTAGCGAC+CGG | + | chr3_4:46804590-46804609 | Msa0503540:intron | 30.0% | |
GACTAATCTTTATCGGATAT+TGG | - | chr3_4:46804733-46804752 | None:intergenic | 30.0% | |
CTATGACGACTAATCTTTAT+CGG | - | chr3_4:46804740-46804759 | None:intergenic | 30.0% | |
AATTCAAATGCGTCCTTAAT+CGG | - | chr3_4:46805106-46805125 | None:intergenic | 30.0% | |
TCAAACAGTACAAGTGTTTA+TGG | - | chr3_4:46805152-46805171 | None:intergenic | 30.0% | |
AGGAAAATGGAATAAAGTTG+AGG | + | chr3_4:46805352-46805371 | Msa0503540:CDS | 30.0% | |
ATGTCTATTGTGCTAAACTT+AGG | - | chr3_4:46805395-46805414 | None:intergenic | 30.0% | |
TTCCACATTGTCATCATTTA+CGG | - | chr3_4:46805450-46805469 | None:intergenic | 30.0% | |
TCTTAACTCACAAAAATGTG+TGG | + | chr3_4:46805495-46805514 | Msa0503540:CDS | 30.0% | |
CTTAACTCACAAAAATGTGT+GGG | + | chr3_4:46805496-46805515 | Msa0503540:CDS | 30.0% | |
GAATGTATCATAGGAAAAGA+TGG | + | chr3_4:46805593-46805612 | Msa0503540:CDS | 30.0% | |
AAATCAAGTAAAAGCGATTG+TGG | + | chr3_4:46805722-46805741 | Msa0503540:CDS | 30.0% | |
AGATCTTATTAGAAGCAATG+GGG | + | chr3_4:46805772-46805791 | Msa0503540:CDS | 30.0% | |
AATTACCAAAAAATTCCCTC+CGG | - | chr3_4:46805820-46805839 | None:intergenic | 30.0% | |
TTTCTAATGTGTGCAATGTT+TGG | + | chr3_4:46806157-46806176 | Msa0503540:intron | 30.0% | |
!! | TAACCCACATTTTTATTTGG+TGG | + | chr3_4:46806246-46806265 | Msa0503540:intron | 30.0% |
CTTTCCACCAAATAAAAATG+TGG | - | chr3_4:46806253-46806272 | None:intergenic | 30.0% | |
AGGATTATATATGATCTGTG+GGG | + | chr3_4:46806306-46806325 | Msa0503540:intron | 30.0% | |
! | TGATGTCTTAAGATTTTGAG+TGG | - | chr3_4:46806452-46806471 | None:intergenic | 30.0% |
TGTTAGATGCATAAAAGAGA+CGG | - | chr3_4:46806485-46806504 | None:intergenic | 30.0% | |
AAGTTGGATCATGTTATAGA+AGG | - | chr3_4:46806589-46806608 | None:intergenic | 30.0% | |
!!! | TACTTGTAGCCTTATGATTT+TGG | - | chr3_4:46806733-46806752 | None:intergenic | 30.0% |
GCTTATTTGAGCATTATGAA+AGG | - | chr3_4:46806854-46806873 | None:intergenic | 30.0% | |
ATTCTTAGTTACCTGAAGTT+CGG | + | chr3_4:46807384-46807403 | Msa0503540:intron | 30.0% | |
CATAGTTGTATAACCTTAAG+TGG | - | chr3_4:46807588-46807607 | None:intergenic | 30.0% | |
AGGATAAAATTTGTCTACTC+AGG | - | chr3_4:46807826-46807845 | None:intergenic | 30.0% | |
AACAAGCCTTAAAAGGAAAA+AGG | - | chr3_4:46807846-46807865 | None:intergenic | 30.0% | |
AGAAGATGAATAGTGAAGAA+GGG | - | chr3_4:46808086-46808105 | None:intergenic | 30.0% | |
AAGAGAAAAGAAACAGAGAT+TGG | - | chr3_4:46808128-46808147 | None:intergenic | 30.0% | |
! | ATAAATGAGATATGGGTTGT+GGG | - | chr3_4:46808151-46808170 | None:intergenic | 30.0% |
! | TATAAATGAGATATGGGTTG+TGG | - | chr3_4:46808152-46808171 | None:intergenic | 30.0% |
!! | TATTTGGTTTGATTTGTTGC+CGG | + | chr3_4:46808406-46808425 | Msa0503540:intron | 30.0% |
!! | TATATGGTTTGATTTGTTGC+CGG | + | chr3_4:46808439-46808458 | Msa0503540:intron | 30.0% |
TTGAAAAAGAGAAGAGAGAA+AGG | - | chr3_4:46808660-46808679 | None:intergenic | 30.0% | |
! | TTGTTGTTGAAGTTTGATTC+TGG | + | chr3_4:46808749-46808768 | Msa0503540:intron | 30.0% |
!!! | TTGTTGTTTTTGAGAAGAGA+TGG | + | chr3_4:46808800-46808819 | Msa0503540:intron | 30.0% |
!! | TTTGAGTTGTTTGAAAGTGA+TGG | + | chr3_4:46808865-46808884 | Msa0503540:intron | 30.0% |
! | TTGAGTTGTTTGAAAGTGAT+GGG | + | chr3_4:46808866-46808885 | Msa0503540:intron | 30.0% |
!!! | TACAAGTGTCATTTTGTCAT+TGG | - | chr3_4:46809004-46809023 | None:intergenic | 30.0% |
! | GCATCTTATTTCATCTTTAG+AGG | - | chr3_4:46809195-46809214 | None:intergenic | 30.0% |
AAATAAGATGCATGCTCATA+TGG | + | chr3_4:46809204-46809223 | Msa0503540:intron | 30.0% | |
AATAAGATGCATGCTCATAT+GGG | + | chr3_4:46809205-46809224 | Msa0503540:intron | 30.0% | |
CTTACTACTATTACTTCGAT+AGG | - | chr3_4:46809733-46809752 | None:intergenic | 30.0% | |
ATGATAAACCAATAATCCCA+AGG | - | chr3_4:46809879-46809898 | None:intergenic | 30.0% | |
! | TTTAAGTCTTGTCTAGTGAA+GGG | - | chr3_4:46809911-46809930 | None:intergenic | 30.0% |
TACTAGAAGTAAACTCTCAT+CGG | - | chr3_4:46810008-46810027 | None:intergenic | 30.0% | |
AGTAATCATGTCAGTGAAAT+AGG | - | chr3_4:46810037-46810056 | None:intergenic | 30.0% | |
TCGCTTTATGAATTGATGTT+TGG | + | chr3_4:46810169-46810188 | Msa0503540:intron | 30.0% | |
CGCTTTATGAATTGATGTTT+GGG | + | chr3_4:46810170-46810189 | Msa0503540:intron | 30.0% | |
ATTGTTAATCCACGTTAAGA+CGG | + | chr3_4:46810245-46810264 | Msa0503540:intron | 30.0% | |
TAGAAATTAGGGTTTAAGCT+TGG | + | chr3_4:46810296-46810315 | Msa0503540:intron | 30.0% | |
TAACGTTCATTGTAGACATA+GGG | + | chr3_4:46810381-46810400 | Msa0503540:intron | 30.0% | |
GATTAACAATTAAGCACAAG+GGG | + | chr3_4:46811226-46811245 | Msa0503540:intron | 30.0% | |
! | TTAGGGTGATTTTGAATCTA+GGG | - | chr3_4:46811315-46811334 | None:intergenic | 30.0% |
AACAAATTCATCAATGCTAG+GGG | - | chr3_4:46811407-46811426 | None:intergenic | 30.0% | |
GAAACAAATTCATCAATGCT+AGG | - | chr3_4:46811409-46811428 | None:intergenic | 30.0% | |
! | TTGTTAAAGTTATAATGGGG+CGG | - | chr3_4:46811514-46811533 | None:intergenic | 30.0% |
AAAGTAGTATAAGTGTGTGT+GGG | - | chr3_4:46811573-46811592 | None:intergenic | 30.0% | |
AAAAGTAGTATAAGTGTGTG+TGG | - | chr3_4:46811574-46811593 | None:intergenic | 30.0% | |
AATAAAGTTCAAGGGAGTTT+GGG | + | chr3_4:46811881-46811900 | Msa0503540:intron | 30.0% | |
AGAGGAAGAAGAAAGATTAA+AGG | + | chr3_4:46812051-46812070 | Msa0503540:intron | 30.0% | |
AGAAGAAAGATTAAAGGAAG+AGG | + | chr3_4:46812057-46812076 | Msa0503540:intron | 30.0% | |
AAGTTCATAAAGTAGACCTT+TGG | + | chr3_4:46812099-46812118 | Msa0503540:intron | 30.0% | |
!! | AACAAAGATAAGGTGTTGAA+AGG | - | chr3_4:46812202-46812221 | None:intergenic | 30.0% |
! | GTGGAAAATTTGCTTTATGT+TGG | - | chr3_4:46812377-46812396 | None:intergenic | 30.0% |
CTCACAATTACCAATATGAA+TGG | - | chr3_4:46812463-46812482 | None:intergenic | 30.0% | |
! | TCATATTGGTAATTGTGAGT+AGG | + | chr3_4:46812464-46812483 | Msa0503540:intron | 30.0% |
GATAAGAGTGATATAATGGT+AGG | - | chr3_4:46812613-46812632 | None:intergenic | 30.0% | |
GGATGATAAGAGTGATATAA+TGG | - | chr3_4:46812617-46812636 | None:intergenic | 30.0% | |
ATATAAAGTAGGATAGAGGT+AGG | - | chr3_4:46812744-46812763 | None:intergenic | 30.0% | |
TACCTCTATCCTACTTTATA+TGG | + | chr3_4:46812743-46812762 | Msa0503540:intron | 30.0% | |
GGAAACAATAGACTTAACAT+GGG | - | chr3_4:46813017-46813036 | None:intergenic | 30.0% | |
AGAAAGAAACTCTATGCTTA+GGG | + | chr3_4:46813374-46813393 | Msa0503540:intron | 30.0% | |
! | AAATTTTCATAAACCCGCAT+AGG | + | chr3_4:46813454-46813473 | Msa0503540:intron | 30.0% |
ATGTTTATAGGCTTATAGGA+AGG | - | chr3_4:46813504-46813523 | None:intergenic | 30.0% | |
! | AGATATTTGGTGGAAAAGAT+TGG | + | chr3_4:46813770-46813789 | Msa0503540:intron | 30.0% |
TTTGTGGTTGTTAGGTTTAA+TGG | + | chr3_4:46813856-46813875 | Msa0503540:intron | 30.0% | |
GTTAGGTTTAATGGAGAATA+AGG | + | chr3_4:46813865-46813884 | Msa0503540:intron | 30.0% | |
!! | GTTTTGGTGAATTATAGGTT+TGG | + | chr3_4:46813887-46813906 | Msa0503540:intron | 30.0% |
!!! | TGAAAGTTATTTTTGATGGG+AGG | + | chr3_4:46813915-46813934 | Msa0503540:intron | 30.0% |
!!! | GAAAGTTATTTTTGATGGGA+GGG | + | chr3_4:46813916-46813935 | Msa0503540:intron | 30.0% |
! | GGATGAAGTTTAGAATTGTT+TGG | + | chr3_4:46813948-46813967 | Msa0503540:intron | 30.0% |
! | TGTTTGGTGAAATAATTGAG+TGG | + | chr3_4:46813964-46813983 | Msa0503540:intron | 30.0% |
GAAGATTTATGGAGATATGA+AGG | + | chr3_4:46813993-46814012 | Msa0503540:intron | 30.0% | |
ATGGAGAAGAAGAGAAAAAT+TGG | + | chr3_4:46814087-46814106 | Msa0503540:intron | 30.0% | |
TGGAGAAGAAGAGAAAAATT+GGG | + | chr3_4:46814088-46814107 | Msa0503540:intron | 30.0% | |
AACAAAAGCAATTAAATGCG+TGG | + | chr3_4:46814340-46814359 | Msa0503540:intron | 30.0% | |
ACAAAAGCAATTAAATGCGT+GGG | + | chr3_4:46814341-46814360 | Msa0503540:intron | 30.0% | |
! | TTTTCCATACCATATGTCAT+AGG | - | chr3_4:46814514-46814533 | None:intergenic | 30.0% |
! | TTTGCTTTGAATGATTGCAA+TGG | + | chr3_4:46814564-46814583 | Msa0503540:intron | 30.0% |
CAAAAATTCATTTCCCACAA+GGG | - | chr3_4:46814627-46814646 | None:intergenic | 30.0% | |
! | AATTTTCTTGGTTTCCACAA+CGG | + | chr3_4:46814732-46814751 | Msa0503540:intron | 30.0% |
CAATAAATGCTATTACACCT+AGG | - | chr3_4:46814780-46814799 | None:intergenic | 30.0% | |
CTAGGTGTAATAGCATTTAT+TGG | + | chr3_4:46814778-46814797 | Msa0503540:intron | 30.0% | |
! | AATAGCATTTATTGGGCTTT+TGG | + | chr3_4:46814786-46814805 | Msa0503540:intron | 30.0% |
! | ATAGCATTTATTGGGCTTTT+GGG | + | chr3_4:46814787-46814806 | Msa0503540:intron | 30.0% |
! | TTTTGAATGACTCTCTCAAT+AGG | - | chr3_4:46814942-46814961 | None:intergenic | 30.0% |
TTCTATCAAAAGTTCCAAGT+CGG | + | chr3_4:46815017-46815036 | Msa0503540:intron | 30.0% | |
! | TGTTGTCCAAAAAGATTTTG+AGG | + | chr3_4:46815087-46815106 | Msa0503540:intron | 30.0% |
! | CAAACTCCTCAAAATCTTTT+TGG | - | chr3_4:46815096-46815115 | None:intergenic | 30.0% |
!!! | TATGAAATTTTTGGTCACAC+TGG | - | chr3_4:46815198-46815217 | None:intergenic | 30.0% |
ATTTCATAAGCTTTACAAGG+TGG | + | chr3_4:46815210-46815229 | Msa0503540:intron | 30.0% | |
!!! | TCTCTAACTGTTTTGATTTC+AGG | - | chr3_4:46815279-46815298 | None:intergenic | 30.0% |
CTTACTACTATTACTTCGAT+AGG | - | chr3_4:46809733-46809752 | None:intergenic | 30.0% | |
ATGATAAACCAATAATCCCA+AGG | - | chr3_4:46809879-46809898 | None:intergenic | 30.0% | |
! | TTTAAGTCTTGTCTAGTGAA+GGG | - | chr3_4:46809911-46809930 | None:intergenic | 30.0% |
TACTAGAAGTAAACTCTCAT+CGG | - | chr3_4:46810008-46810027 | None:intergenic | 30.0% | |
AGTAATCATGTCAGTGAAAT+AGG | - | chr3_4:46810037-46810056 | None:intergenic | 30.0% | |
TCGCTTTATGAATTGATGTT+TGG | + | chr3_4:46810169-46810188 | Msa0503540:intron | 30.0% | |
CGCTTTATGAATTGATGTTT+GGG | + | chr3_4:46810170-46810189 | Msa0503540:intron | 30.0% | |
ATTGTTAATCCACGTTAAGA+CGG | + | chr3_4:46810245-46810264 | Msa0503540:intron | 30.0% | |
TAGAAATTAGGGTTTAAGCT+TGG | + | chr3_4:46810296-46810315 | Msa0503540:intron | 30.0% | |
TAACGTTCATTGTAGACATA+GGG | + | chr3_4:46810381-46810400 | Msa0503540:intron | 30.0% | |
! | GATTGCTTCTTCAACTTTTA+GGG | - | chr3_4:46816798-46816817 | None:intergenic | 30.0% |
! | TGAAGTATGGATTTTCTCTA+AGG | + | chr3_4:46817056-46817075 | Msa0503540:intron | 30.0% |
!! | TCAGATGGCATTGATATATT+GGG | - | chr3_4:46817200-46817219 | None:intergenic | 30.0% |
!! | TTCAGATGGCATTGATATAT+TGG | - | chr3_4:46817201-46817220 | None:intergenic | 30.0% |
AAAACTATGTCACATGTCTT+AGG | + | chr3_4:46817237-46817256 | Msa0503540:CDS | 30.0% | |
TTTGCATATATCTATACCCT+TGG | + | chr3_4:46817269-46817288 | Msa0503540:CDS | 30.0% | |
ACCCCAAATCAAAAATGTTT+GGG | - | chr3_4:46817461-46817480 | None:intergenic | 30.0% | |
AACCCCAAATCAAAAATGTT+TGG | - | chr3_4:46817462-46817481 | None:intergenic | 30.0% | |
CCATAAAACAATAACAACCA+AGG | - | chr3_4:46817489-46817508 | None:intergenic | 30.0% | |
!! | CCTTGGTTGTTATTGTTTTA+TGG | + | chr3_4:46817486-46817505 | Msa0503540:intron | 30.0% |
AAATCCATATGAATCGTACT+TGG | + | chr3_4:46817602-46817621 | Msa0503540:CDS | 30.0% | |
AATCCATATGAATCGTACTT+GGG | + | chr3_4:46817603-46817622 | Msa0503540:CDS | 30.0% | |
TGAATTGGATACCTTGATTT+GGG | - | chr3_4:46817686-46817705 | None:intergenic | 30.0% | |
ATGAATTGGATACCTTGATT+TGG | - | chr3_4:46817687-46817706 | None:intergenic | 30.0% | |
! | AGGTATCCAATTCATTTTAG+TGG | + | chr3_4:46817692-46817711 | Msa0503540:intron | 30.0% |
AAGAGACCACTAAAATGAAT+TGG | - | chr3_4:46817701-46817720 | None:intergenic | 30.0% | |
TTTCGCACAAACTTATTTGA+CGG | + | chr3_4:46817837-46817856 | Msa0503540:intron | 30.0% | |
! | TGAACTTGAGAAAGCAATTT+TGG | + | chr3_4:46818073-46818092 | Msa0503540:CDS | 30.0% |
!!! | ATTTTAACTGCAGCAAGAAA+TGG | + | chr3_4:46818110-46818129 | Msa0503540:CDS | 30.0% |
AAATGGCATAGTTGAAATAG+TGG | + | chr3_4:46818127-46818146 | Msa0503540:CDS | 30.0% | |
TTCCATATACGAAGTTAACA+TGG | + | chr3_4:46818175-46818194 | Msa0503540:CDS | 30.0% | |
TTCCATGTTAACTTCGTATA+TGG | - | chr3_4:46818180-46818199 | None:intergenic | 30.0% | |
CCTTAATACCTCAACAATAA+TGG | - | chr3_4:46818243-46818262 | None:intergenic | 30.0% | |
! | CCATTATTGTTGAGGTATTA+AGG | + | chr3_4:46818240-46818259 | Msa0503540:CDS | 30.0% |
! | TTGTTGAGGTATTAAGGAAA+CGG | + | chr3_4:46818246-46818265 | Msa0503540:CDS | 30.0% |
! | GTTTGAAGAGTGCAATAAAA+AGG | + | chr3_4:46818268-46818287 | Msa0503540:CDS | 30.0% |
ATATACAGTCCTGATATCAA+TGG | - | chr3_4:46818554-46818573 | None:intergenic | 30.0% | |
CTGTATATGTGTTTGCAATT+TGG | + | chr3_4:46818566-46818585 | Msa0503540:intron | 30.0% | |
!! | CTATTGATTGGTTTGGATAT+TGG | - | chr3_4:46818608-46818627 | None:intergenic | 30.0% |
AAATCCAATCCATTCATGAT+CGG | - | chr3_4:46818868-46818887 | None:intergenic | 30.0% | |
GATAGTGATTTCAACTTTCA+AGG | - | chr3_4:46818923-46818942 | None:intergenic | 30.0% | |
TATCATTGATAGAATCTCTC+TGG | + | chr3_4:46818939-46818958 | Msa0503540:intron | 30.0% | |
GTGTTCAAAAGTAGTTAGAA+GGG | - | chr3_4:46818984-46819003 | None:intergenic | 30.0% | |
TGTGTTCAAAAGTAGTTAGA+AGG | - | chr3_4:46818985-46819004 | None:intergenic | 30.0% | |
!! | TCTAACTACTTTTGAACACA+TGG | + | chr3_4:46818985-46819004 | Msa0503540:intron | 30.0% |
TTTGCTTTGTCTTCAGTAAT+TGG | + | chr3_4:46819271-46819290 | Msa0503540:CDS | 30.0% | |
! | TTTACCAAGGAAACTTCTTT+TGG | + | chr3_4:46819375-46819394 | Msa0503540:CDS | 30.0% |
! | TTACCAAGGAAACTTCTTTT+GGG | + | chr3_4:46819376-46819395 | Msa0503540:CDS | 30.0% |
TATGGTCAATCAGAAAGAAA+TGG | - | chr3_4:46819456-46819475 | None:intergenic | 30.0% | |
ACACAATGTGCTTGTATTTA+TGG | - | chr3_4:46819474-46819493 | None:intergenic | 30.0% | |
CTAAGAAGATCAATGTAAAG+TGG | - | chr3_4:46819553-46819572 | None:intergenic | 30.0% | |
CTTTACATTGATCTTCTTAG+AGG | + | chr3_4:46819553-46819572 | Msa0503540:CDS | 30.0% | |
ATATGTATGATGTTGGATTG+TGG | + | chr3_4:46819731-46819750 | Msa0503540:three_prime_UTR | 30.0% | |
TGGAACATAACACTAACACA+TGG | + | chr3_4:46804375-46804394 | Msa0503540:five_prime_UTR | 35.0% | |
AATGTTCATGATGGTCTTCA+AGG | - | chr3_4:46804476-46804495 | None:intergenic | 35.0% | |
TAGTAGATTGCAACCGATTA+AGG | + | chr3_4:46805090-46805109 | Msa0503540:intron | 35.0% | |
! | AATTTGAAATGTGTGTCCAG+AGG | + | chr3_4:46805298-46805317 | Msa0503540:intron | 35.0% |
ATAGACATCAACAAAAGCAG+AGG | + | chr3_4:46805407-46805426 | Msa0503540:CDS | 35.0% | |
GGAAGTTGTTAAAAGTCTTG+TGG | + | chr3_4:46805466-46805485 | Msa0503540:CDS | 35.0% | |
TCATAGGAAAAGATGGTGAA+AGG | + | chr3_4:46805600-46805619 | Msa0503540:CDS | 35.0% | |
TGCATGGGAATGAATGTTAA+AGG | + | chr3_4:46806286-46806305 | Msa0503540:intron | 35.0% | |
CACTTGATGGAAAGAATGTT+GGG | - | chr3_4:46806556-46806575 | None:intergenic | 35.0% | |
ACACTTGATGGAAAGAATGT+TGG | - | chr3_4:46806557-46806576 | None:intergenic | 35.0% | |
TGGATCATGTTATAGAAGGT+GGG | - | chr3_4:46806585-46806604 | None:intergenic | 35.0% | |
TTGGATCATGTTATAGAAGG+TGG | - | chr3_4:46806586-46806605 | None:intergenic | 35.0% | |
AACAAGTAGTATCAGAGTCT+TGG | - | chr3_4:46806633-46806652 | None:intergenic | 35.0% | |
CAACAACATGTCAATGCTTT+AGG | + | chr3_4:46806676-46806695 | Msa0503540:intron | 35.0% | |
CATCTCCATCCAAAATCATA+AGG | + | chr3_4:46806721-46806740 | Msa0503540:intron | 35.0% | |
!!! | TGTAGCCTTATGATTTTGGA+TGG | - | chr3_4:46806729-46806748 | None:intergenic | 35.0% |
ATCGACATTCCAAACAAACA+AGG | + | chr3_4:46807151-46807170 | Msa0503540:CDS | 35.0% | |
!! | CTAGTAGCAAGAAGTTTTAG+AGG | - | chr3_4:46807184-46807203 | None:intergenic | 35.0% |
!! | CTCTAAAACTTCTTGCTACT+AGG | + | chr3_4:46807182-46807201 | Msa0503540:CDS | 35.0% |
AATTAGTATCGCATGAAGAG+CGG | + | chr3_4:46807747-46807766 | Msa0503540:intron | 35.0% | |
TCAAGTCAACAAGCCTTAAA+AGG | - | chr3_4:46807853-46807872 | None:intergenic | 35.0% | |
GAAAGGACTAAAAGTGGTAA+CGG | - | chr3_4:46809056-46809075 | None:intergenic | 35.0% | |
GAAGATGAATAGTGAAGAAG+GGG | - | chr3_4:46808085-46808104 | None:intergenic | 35.0% | |
GAGAAGATGAATAGTGAAGA+AGG | - | chr3_4:46808087-46808106 | None:intergenic | 35.0% | |
!! | TTTGATTTGTTGCCGGAAAT+GGG | + | chr3_4:46808446-46808465 | Msa0503540:intron | 35.0% |
! | AAGGACATTGTTGTTCTTGA+TGG | + | chr3_4:46808937-46808956 | Msa0503540:intron | 35.0% |
TGGTAACAGAGAGAAAGTTA+AGG | + | chr3_4:46809070-46809089 | Msa0503540:intron | 35.0% | |
GGTAACAGAGAGAAAGTTAA+GGG | + | chr3_4:46809071-46809090 | Msa0503540:intron | 35.0% | |
TGTTATGACACACTATCAAC+AGG | + | chr3_4:46809676-46809695 | Msa0503540:intron | 35.0% | |
TAAAAGAGCCTTGGGATTAT+TGG | + | chr3_4:46809868-46809887 | Msa0503540:intron | 35.0% | |
! | GTTTAAGTCTTGTCTAGTGA+AGG | - | chr3_4:46809912-46809931 | None:intergenic | 35.0% |
ACACCTTAATTCCTAAAGAC+CGG | + | chr3_4:46809949-46809968 | Msa0503540:intron | 35.0% | |
! | AAACCGGTCTTTAGGAATTA+AGG | - | chr3_4:46809955-46809974 | None:intergenic | 35.0% |
GATTACTAGAAGATGCATAG+AGG | + | chr3_4:46810050-46810069 | Msa0503540:intron | 35.0% | |
ATCAATTCATAAAGCGAGAG+CGG | - | chr3_4:46810166-46810185 | None:intergenic | 35.0% | |
! | TGAATTGATGTTTGGGATGA+TGG | + | chr3_4:46810177-46810196 | Msa0503540:intron | 35.0% |
!! | GGTTTAAGCTTGGTTTGTTT+AGG | + | chr3_4:46810306-46810325 | Msa0503540:intron | 35.0% |
AGTAGACACTTCTTTGTCTT+GGG | - | chr3_4:46810358-46810377 | None:intergenic | 35.0% | |
CTAACGTTCATTGTAGACAT+AGG | + | chr3_4:46810380-46810399 | Msa0503540:intron | 35.0% | |
AACGTTCATTGTAGACATAG+GGG | + | chr3_4:46810382-46810401 | Msa0503540:intron | 35.0% | |
TTGAAGAAAAGCAGCAAAAG+TGG | + | chr3_4:46810576-46810595 | Msa0503540:intron | 35.0% | |
! | AGGAAAGAATATATGGTGGA+AGG | - | chr3_4:46810742-46810761 | None:intergenic | 35.0% |
ACAAGCAAAGATTCAAGTGT+GGG | - | chr3_4:46810899-46810918 | None:intergenic | 35.0% | |
AGAACACATGTCTCAAAGAA+AGG | + | chr3_4:46810979-46810998 | Msa0503540:intron | 35.0% | |
!! | GATTTGATGTTGGGTTGAAT+AGG | - | chr3_4:46811051-46811070 | None:intergenic | 35.0% |
CTCACTTGAGATTTGATGTT+GGG | - | chr3_4:46811060-46811079 | None:intergenic | 35.0% | |
ACTCACTTGAGATTTGATGT+TGG | - | chr3_4:46811061-46811080 | None:intergenic | 35.0% | |
CTTATACAGGAGCAAGAAAA+GGG | - | chr3_4:46811099-46811118 | None:intergenic | 35.0% | |
TCTTATACAGGAGCAAGAAA+AGG | - | chr3_4:46811100-46811119 | None:intergenic | 35.0% | |
AGACAGATATTATGAGGAAC+AGG | + | chr3_4:46811117-46811136 | Msa0503540:intron | 35.0% | |
AATGAAGAAAGGACTTTCCT+CGG | - | chr3_4:46811166-46811185 | None:intergenic | 35.0% | |
! | TAGGGTGATTTTGAATCTAG+GGG | - | chr3_4:46811314-46811333 | None:intergenic | 35.0% |
! | CTTAGGGTGATTTTGAATCT+AGG | - | chr3_4:46811316-46811335 | None:intergenic | 35.0% |
! | TAATTTTGCAGCACTGCTTA+GGG | - | chr3_4:46811332-46811351 | None:intergenic | 35.0% |
! | ATAATTTTGCAGCACTGCTT+AGG | - | chr3_4:46811333-46811352 | None:intergenic | 35.0% |
ACAAATTCATCAATGCTAGG+GGG | - | chr3_4:46811406-46811425 | None:intergenic | 35.0% | |
AATCCCTAACTTCCTAATTG+TGG | - | chr3_4:46811460-46811479 | None:intergenic | 35.0% | |
! | TGTTAAAGTTATAATGGGGC+GGG | - | chr3_4:46811513-46811532 | None:intergenic | 35.0% |
TTAACACGAAAGATAGAACG+TGG | + | chr3_4:46811620-46811639 | Msa0503540:intron | 35.0% | |
CTTTGAGCAAGTGTATGATT+AGG | - | chr3_4:46811657-46811676 | None:intergenic | 35.0% | |
GAATAAAGTTCAAGGGAGTT+TGG | + | chr3_4:46811880-46811899 | Msa0503540:intron | 35.0% | |
! | TAATAAAGTGTCTAGAGTCG+TGG | - | chr3_4:46811911-46811930 | None:intergenic | 35.0% |
ACGACTCTAGACACTTTATT+AGG | + | chr3_4:46811910-46811929 | Msa0503540:intron | 35.0% | |
AAAGAAGAAGAAGAAGAGGA+AGG | + | chr3_4:46811989-46812008 | Msa0503540:intron | 35.0% | |
GGAGAAGAAGAAAAAGAAGA+AGG | + | chr3_4:46812010-46812029 | Msa0503540:intron | 35.0% | |
AGTAGAAGTAGAAGAAGAAG+AGG | + | chr3_4:46812033-46812052 | Msa0503540:intron | 35.0% | |
TTCATAAAGTAGACCTTTGG+AGG | + | chr3_4:46812102-46812121 | Msa0503540:intron | 35.0% | |
CATTTATTCGATTGCTCCTT+TGG | + | chr3_4:46812168-46812187 | Msa0503540:intron | 35.0% | |
TTGAAAGGAACAATGTCCAA+AGG | - | chr3_4:46812187-46812206 | None:intergenic | 35.0% | |
AACACCTTATCTTTGTTGCT+CGG | + | chr3_4:46812205-46812224 | Msa0503540:intron | 35.0% | |
GGTGCTTATTCTTTGAACTT+TGG | + | chr3_4:46812226-46812245 | Msa0503540:intron | 35.0% | |
GTGGAAGCTATAATGATGAA+CGG | - | chr3_4:46812268-46812287 | None:intergenic | 35.0% | |
TTCATCATTATAGCTTCCAC+CGG | + | chr3_4:46812268-46812287 | Msa0503540:intron | 35.0% | |
TAATCCGGACATAACTAATC+CGG | - | chr3_4:46812405-46812424 | None:intergenic | 35.0% | |
! | TTTTCTTGCTAGGAAGTTTG+GGG | - | chr3_4:46812578-46812597 | None:intergenic | 35.0% |
! | CTTTTCTTGCTAGGAAGTTT+GGG | - | chr3_4:46812579-46812598 | None:intergenic | 35.0% |
! | ACTTTTCTTGCTAGGAAGTT+TGG | - | chr3_4:46812580-46812599 | None:intergenic | 35.0% |
!! | GAATCATCACTTTTCTTGCT+AGG | - | chr3_4:46812588-46812607 | None:intergenic | 35.0% |
AAGAGTGATATAATGGTAGG+TGG | - | chr3_4:46812610-46812629 | None:intergenic | 35.0% | |
CACCATATAAAGTAGGATAG+AGG | - | chr3_4:46812748-46812767 | None:intergenic | 35.0% | |
! | TCCTACTTTATATGGTGTCA+TGG | + | chr3_4:46812751-46812770 | Msa0503540:intron | 35.0% |
ACCATGACACCATATAAAGT+AGG | - | chr3_4:46812755-46812774 | None:intergenic | 35.0% | |
! | TTTTACTTCCTAACCCATCT+CGG | - | chr3_4:46812917-46812936 | None:intergenic | 35.0% |
TAGGCACATTAAACTTGAGT+TGG | + | chr3_4:46812943-46812962 | Msa0503540:intron | 35.0% | |
!! | CATTAAACTTGAGTTGGTGA+TGG | + | chr3_4:46812949-46812968 | Msa0503540:intron | 35.0% |
GGGAAACAATAGACTTAACA+TGG | - | chr3_4:46813018-46813037 | None:intergenic | 35.0% | |
! | ACATACATAGGTAGGCATTT+TGG | - | chr3_4:46813074-46813093 | None:intergenic | 35.0% |
GCATCATTACATACATAGGT+AGG | - | chr3_4:46813082-46813101 | None:intergenic | 35.0% | |
!! | AGATAAAAGCAAGTGTTGAC+TGG | + | chr3_4:46813165-46813184 | Msa0503540:intron | 35.0% |
!! | GATAAAAGCAAGTGTTGACT+GGG | + | chr3_4:46813166-46813185 | Msa0503540:intron | 35.0% |
GGGGTATATTCATGATTCTT+GGG | - | chr3_4:46813287-46813306 | None:intergenic | 35.0% | |
! | AGGGGTATATTCATGATTCT+TGG | - | chr3_4:46813288-46813307 | None:intergenic | 35.0% |
CTAAGCATAGAGTTTCTTTC+TGG | - | chr3_4:46813375-46813394 | None:intergenic | 35.0% | |
CAGAAAGAAACTCTATGCTT+AGG | + | chr3_4:46813373-46813392 | Msa0503540:intron | 35.0% | |
!! | TGATTTGTTGAAACCTATGC+GGG | - | chr3_4:46813470-46813489 | None:intergenic | 35.0% |
!! | CTGATTTGTTGAAACCTATG+CGG | - | chr3_4:46813471-46813490 | None:intergenic | 35.0% |
GCTGATGTTTATAGGCTTAT+AGG | - | chr3_4:46813508-46813527 | None:intergenic | 35.0% | |
!! | AGCTTAGTGCTGATGTTTAT+AGG | - | chr3_4:46813516-46813535 | None:intergenic | 35.0% |
ATTTCGAGACAACAAGCAAT+GGG | - | chr3_4:46813614-46813633 | None:intergenic | 35.0% | |
AATTTCGAGACAACAAGCAA+TGG | - | chr3_4:46813615-46813634 | None:intergenic | 35.0% | |
!! | ATTGCTTGTTGTCTCGAAAT+TGG | + | chr3_4:46813614-46813633 | Msa0503540:intron | 35.0% |
!!! | TGGATTGGTTTTGAAGGTTT+AGG | + | chr3_4:46813739-46813758 | Msa0503540:intron | 35.0% |
!!! | GGATTGGTTTTGAAGGTTTA+GGG | + | chr3_4:46813740-46813759 | Msa0503540:intron | 35.0% |
!!! | GTTTTGAAGGTTTAGGGTTT+GGG | + | chr3_4:46813746-46813765 | Msa0503540:intron | 35.0% |
TTAGGGTTTGGGAAGATATT+TGG | + | chr3_4:46813757-46813776 | Msa0503540:intron | 35.0% | |
!! | TTGGTGGAAAAGATTGGTTT+AGG | + | chr3_4:46813776-46813795 | Msa0503540:intron | 35.0% |
!! | TGGTGGAAAAGATTGGTTTA+GGG | + | chr3_4:46813777-46813796 | Msa0503540:intron | 35.0% |
!! | TTTAGTAAGGTTGATGGGTT+TGG | + | chr3_4:46813813-46813832 | Msa0503540:intron | 35.0% |
!! | GGAGATTTGTTGAGAATTTG+TGG | + | chr3_4:46813840-46813859 | Msa0503540:intron | 35.0% |
GTTGAGAATTTGTGGTTGTT+AGG | + | chr3_4:46813848-46813867 | Msa0503540:intron | 35.0% | |
!!! | TTATTTTTGATGGGAGGGTT+TGG | + | chr3_4:46813921-46813940 | Msa0503540:intron | 35.0% |
GGTGAAATAATTGAGTGGAT+TGG | + | chr3_4:46813969-46813988 | Msa0503540:intron | 35.0% | |
!! | AGTGGATTGGTGAAGATTTA+TGG | + | chr3_4:46813982-46814001 | Msa0503540:intron | 35.0% |
TATGGAGATATGAAGGTTTG+AGG | + | chr3_4:46814000-46814019 | Msa0503540:intron | 35.0% | |
! | TATGAAGGTTTGAGGTTTGA+AGG | + | chr3_4:46814008-46814027 | Msa0503540:intron | 35.0% |
GGAAGTTTAGAGAGAGATTT+AGG | + | chr3_4:46814035-46814054 | Msa0503540:intron | 35.0% | |
AGAGATTTAGGAGATGAAAG+AGG | + | chr3_4:46814047-46814066 | Msa0503540:intron | 35.0% | |
TTTCTTCAAAAACACTGGCA+CGG | + | chr3_4:46814192-46814211 | Msa0503540:intron | 35.0% | |
! | TCATTAGCTTGACGATCAAA+AGG | + | chr3_4:46814392-46814411 | Msa0503540:intron | 35.0% |
CTTAGTGAGAGATTAGGTAT+CGG | - | chr3_4:46814427-46814446 | None:intergenic | 35.0% | |
GATACCTAATCTCTCACTAA+GGG | + | chr3_4:46814426-46814445 | Msa0503540:intron | 35.0% | |
AAAGAACCACATGTGATTTG+GGG | - | chr3_4:46814477-46814496 | None:intergenic | 35.0% | |
GAAAGAACCACATGTGATTT+GGG | - | chr3_4:46814478-46814497 | None:intergenic | 35.0% | |
AGAAAGAACCACATGTGATT+TGG | - | chr3_4:46814479-46814498 | None:intergenic | 35.0% | |
TGTGGTTCTTTCTATAGTCT+TGG | + | chr3_4:46814486-46814505 | Msa0503540:intron | 35.0% | |
TATGGTATGGAAAAACTCTC+TGG | + | chr3_4:46814520-46814539 | Msa0503540:intron | 35.0% | |
CCAAGTTAGATGAACAGTTT+AGG | - | chr3_4:46814594-46814613 | None:intergenic | 35.0% | |
CCTAAACTGTTCATCTAACT+TGG | + | chr3_4:46814591-46814610 | Msa0503540:intron | 35.0% | |
CCAAAAATTCATTTCCCACA+AGG | - | chr3_4:46814628-46814647 | None:intergenic | 35.0% | |
! | CCTTGTGGGAAATGAATTTT+TGG | + | chr3_4:46814625-46814644 | Msa0503540:intron | 35.0% |
!!! | TGAATTTTTGGCTCATATGG+TGG | + | chr3_4:46814637-46814656 | Msa0503540:intron | 35.0% |
GAGAAAGTTGTAGTAGAAAG+TGG | - | chr3_4:46814679-46814698 | None:intergenic | 35.0% | |
ACTACAACTTTCTCACTTTG+TGG | + | chr3_4:46814685-46814704 | Msa0503540:intron | 35.0% | |
! | TACCTCAACCTCAATTTTCT+TGG | + | chr3_4:46814720-46814739 | Msa0503540:intron | 35.0% |
AACCAAGAAAATTGAGGTTG+AGG | - | chr3_4:46814725-46814744 | None:intergenic | 35.0% | |
TGTGGAAACCAAGAAAATTG+AGG | - | chr3_4:46814731-46814750 | None:intergenic | 35.0% | |
! | ATTTTCTTGGTTTCCACAAC+GGG | + | chr3_4:46814733-46814752 | Msa0503540:intron | 35.0% |
! | TAGCATTTATTGGGCTTTTG+GGG | + | chr3_4:46814788-46814807 | Msa0503540:intron | 35.0% |
AGAAAGAGAATCCACATTTG+CGG | + | chr3_4:46814912-46814931 | Msa0503540:intron | 35.0% | |
GTCATTCAAAATTCCAGCTT+TGG | + | chr3_4:46814951-46814970 | Msa0503540:intron | 35.0% | |
TCTTTGGTTGTTTGCAAAAC+CGG | + | chr3_4:46815053-46815072 | Msa0503540:intron | 35.0% | |
TGGCTCAAAACCTTTATCAA+TGG | - | chr3_4:46815254-46815273 | None:intergenic | 35.0% | |
!!! | AACTGTTTTGATTTCAGGCA+TGG | - | chr3_4:46815274-46815293 | None:intergenic | 35.0% |
ATCAAATTACAACAACTCCC+CGG | + | chr3_4:46815553-46815572 | Msa0503540:intron | 35.0% | |
!!! | GTTTGGCTCTATCAAGTTTT+TGG | - | chr3_4:46815587-46815606 | None:intergenic | 35.0% |
TAAAAGAGCCTTGGGATTAT+TGG | + | chr3_4:46809868-46809887 | Msa0503540:intron | 35.0% | |
! | GTTTAAGTCTTGTCTAGTGA+AGG | - | chr3_4:46809912-46809931 | None:intergenic | 35.0% |
ACACCTTAATACCTAAAGAC+CGG | + | chr3_4:46815839-46815858 | Msa0503540:intron | 35.0% | |
AAACCGGTCTTTAGGTATTA+AGG | - | chr3_4:46815845-46815864 | None:intergenic | 35.0% | |
GATTACTAGAAGATGCATAG+AGG | + | chr3_4:46810050-46810069 | Msa0503540:intron | 35.0% | |
ATCAATTCATAAAGCGAGAG+CGG | - | chr3_4:46810166-46810185 | None:intergenic | 35.0% | |
! | TGAATTGATGTTTGGGATGA+TGG | + | chr3_4:46810177-46810196 | Msa0503540:intron | 35.0% |
!! | GGTTTAAGCTTGGTTTGTTT+AGG | + | chr3_4:46810306-46810325 | Msa0503540:intron | 35.0% |
AGTAGACACTTCTTTGTCTT+GGG | - | chr3_4:46810358-46810377 | None:intergenic | 35.0% | |
CTAACGTTCATTGTAGACAT+AGG | + | chr3_4:46810380-46810399 | Msa0503540:intron | 35.0% | |
AACGTTCATTGTAGACATAG+GGG | + | chr3_4:46810382-46810401 | Msa0503540:intron | 35.0% | |
TTGAAGAAAAGCAGCAAAAG+TGG | + | chr3_4:46810576-46810595 | Msa0503540:intron | 35.0% | |
! | AGGAAAGAATATATGGTGGA+AGG | - | chr3_4:46810742-46810761 | None:intergenic | 35.0% |
! | CGATTGCTTCTTCAACTTTT+AGG | - | chr3_4:46816799-46816818 | None:intergenic | 35.0% |
TAACATGTGTCGTAGTTCTT+TGG | - | chr3_4:46816869-46816888 | None:intergenic | 35.0% | |
TGCTTAGCAAAACCTATAAG+TGG | - | chr3_4:46816926-46816945 | None:intergenic | 35.0% | |
ACTACTTCTAATGCTGCAAA+TGG | + | chr3_4:46816965-46816984 | Msa0503540:CDS | 35.0% | |
TGTATTTATGCTATTCAGCC+AGG | + | chr3_4:46817030-46817049 | Msa0503540:intron | 35.0% | |
GTATTTATGCTATTCAGCCA+GGG | + | chr3_4:46817031-46817050 | Msa0503540:intron | 35.0% | |
AATAAGGGAGAGAAACACAT+AGG | + | chr3_4:46817155-46817174 | Msa0503540:CDS | 35.0% | |
! | AGACATGTGACATAGTTTTC+TGG | - | chr3_4:46817236-46817255 | None:intergenic | 35.0% |
!! | TCGCCCAAACATTTTTGATT+TGG | + | chr3_4:46817455-46817474 | Msa0503540:intron | 35.0% |
!!! | CGCCCAAACATTTTTGATTT+GGG | + | chr3_4:46817456-46817475 | Msa0503540:intron | 35.0% |
!!! | GCCCAAACATTTTTGATTTG+GGG | + | chr3_4:46817457-46817476 | Msa0503540:intron | 35.0% |
! | AGATGAAGGAAAAGCACAAA+TGG | + | chr3_4:46817550-46817569 | Msa0503540:CDS | 35.0% |
TCTGTTTACAACCCAAATCA+AGG | + | chr3_4:46817672-46817691 | Msa0503540:CDS | 35.0% | |
! | TCTATCCTTCCGATTTTCAA+GGG | - | chr3_4:46817924-46817943 | None:intergenic | 35.0% |
TACTTGTAGCAGTTGAAAAC+AGG | + | chr3_4:46818213-46818232 | Msa0503540:CDS | 35.0% | |
TGATAATCTAATCCAAGGGA+TGG | + | chr3_4:46818298-46818317 | Msa0503540:CDS | 35.0% | |
TATATGCCACATCATTTGCA+AGG | - | chr3_4:46818396-46818415 | None:intergenic | 35.0% | |
GTGGCATATAAAATGGTTTC+AGG | + | chr3_4:46818406-46818425 | Msa0503540:CDS | 35.0% | |
!! | GATTGGTTTGGATATTGGTT+TGG | - | chr3_4:46818603-46818622 | None:intergenic | 35.0% |
! | TCAACGACTATTGATTGGTT+TGG | - | chr3_4:46818615-46818634 | None:intergenic | 35.0% |
!! | TCATAGTCTTTGGTTTGAGT+TGG | + | chr3_4:46818798-46818817 | Msa0503540:intron | 35.0% |
!! | CATAGTCTTTGGTTTGAGTT+GGG | + | chr3_4:46818799-46818818 | Msa0503540:intron | 35.0% |
AATCCAATCCATTCATGATC+GGG | - | chr3_4:46818867-46818886 | None:intergenic | 35.0% | |
!! | GATCATGAATGGATTGGATT+TGG | + | chr3_4:46818867-46818886 | Msa0503540:intron | 35.0% |
CACATGGATCAGTATACTAA+AGG | + | chr3_4:46819001-46819020 | Msa0503540:intron | 35.0% | |
AACAAAGAAGACAAAACAGC+TGG | + | chr3_4:46819055-46819074 | Msa0503540:CDS | 35.0% | |
CAAGAAATCACATGAAGAAC+TGG | + | chr3_4:46819087-46819106 | Msa0503540:CDS | 35.0% | |
CATGAAGAACTGGTACAAAA+AGG | + | chr3_4:46819097-46819116 | Msa0503540:CDS | 35.0% | |
AAAGCAAATGCATCAAATGC+AGG | - | chr3_4:46819259-46819278 | None:intergenic | 35.0% | |
! | TTCCTTTCTAGAAGTGAGTA+TGG | - | chr3_4:46819335-46819354 | None:intergenic | 35.0% |
AATCCCAAAAGAAGTTTCCT+TGG | - | chr3_4:46819382-46819401 | None:intergenic | 35.0% | |
GGAGGACATATAAAGTTGTA+TGG | + | chr3_4:46819612-46819631 | Msa0503540:exon | 35.0% | |
AGAACAGTACTACCTATGTT+TGG | + | chr3_4:46819667-46819686 | Msa0503540:three_prime_UTR | 35.0% | |
AAGTATACTGCTCCAAACAT+AGG | - | chr3_4:46819682-46819701 | None:intergenic | 35.0% | |
!!! | GGATTGTGGTTATTTTAGTG+AGG | + | chr3_4:46819745-46819764 | Msa0503540:three_prime_UTR | 35.0% |
AATAATTATGACACGCACGC+AGG | - | chr3_4:46804977-46804996 | None:intergenic | 40.0% | |
GACAATGCAGCAAGAAACAA+AGG | - | chr3_4:46805665-46805684 | None:intergenic | 40.0% | |
TGTTTCTTGCTGCATTGTCT+TGG | + | chr3_4:46805666-46805685 | Msa0503540:CDS | 40.0% | |
GTATTCTTCACTGTGCAATC+CGG | + | chr3_4:46805798-46805817 | Msa0503540:CDS | 40.0% | |
CCATCGATATGATGATTTCC+TGG | - | chr3_4:46805928-46805947 | None:intergenic | 40.0% | |
CCAGGAAATCATCATATCGA+TGG | + | chr3_4:46805925-46805944 | Msa0503540:intron | 40.0% | |
GTCGTTTGATTGAGATCAGA+CGG | + | chr3_4:46805947-46805966 | Msa0503540:intron | 40.0% | |
ATCAGCATATCAGTGGTTGT+TGG | - | chr3_4:46806084-46806103 | None:intergenic | 40.0% | |
GCTTGCAATAAGTTGTTGCT+TGG | + | chr3_4:46806105-46806124 | Msa0503540:intron | 40.0% | |
GTAGTATCAGAGTCTTGGTT+CGG | - | chr3_4:46806628-46806647 | None:intergenic | 40.0% | |
! | GACTCTGATACTACTTGTTG+AGG | + | chr3_4:46806634-46806653 | Msa0503540:intron | 40.0% |
! | ATACTACTTGTTGAGGAGTC+CGG | + | chr3_4:46806641-46806660 | Msa0503540:intron | 40.0% |
! | TTTGGAATGTCGATAAGCTC+TGG | - | chr3_4:46807145-46807164 | None:intergenic | 40.0% |
! | GGACTGAATCCTTGTTTGTT+TGG | - | chr3_4:46807163-46807182 | None:intergenic | 40.0% |
AAAGCGGATGCAAGATGATA+TGG | + | chr3_4:46807218-46807237 | Msa0503540:CDS | 40.0% | |
GAAATGTTGCACACTTACAG+TGG | - | chr3_4:46807261-46807280 | None:intergenic | 40.0% | |
TTAGTTACCTGAAGTTCGGT+AGG | + | chr3_4:46807388-46807407 | Msa0503540:intron | 40.0% | |
TAGTTACCTGAAGTTCGGTA+GGG | + | chr3_4:46807389-46807408 | Msa0503540:intron | 40.0% | |
CTAACGGAAAGGACTAAAAG+TGG | - | chr3_4:46809050-46809069 | None:intergenic | 40.0% | |
AGAGATTGGAGAAGAAGATG+AGG | - | chr3_4:46808114-46808133 | None:intergenic | 40.0% | |
GTTTCCAGTGAATCGAACAA+CGG | - | chr3_4:46808380-46808399 | None:intergenic | 40.0% | |
GTTGTTCGATTCACTGGAAA+CGG | + | chr3_4:46808379-46808398 | Msa0503540:intron | 40.0% | |
TTGTTCGATTCACTGGAAAC+GGG | + | chr3_4:46808380-46808399 | Msa0503540:intron | 40.0% | |
!! | GTTTGATTTGTTGCCGGAAA+CGG | + | chr3_4:46808412-46808431 | Msa0503540:intron | 40.0% |
!! | TTTGATTTGTTGCCGGAAAC+GGG | + | chr3_4:46808413-46808432 | Msa0503540:intron | 40.0% |
!! | GTTTGATTTGTTGCCGGAAA+TGG | + | chr3_4:46808412-46808431 | Msa0503540:intron | 40.0% |
AGAGAGAGAGAGAGAAAAGA+GGG | - | chr3_4:46808580-46808599 | None:intergenic | 40.0% | |
AAGAGAGAAAGGAGAAGAGA+GGG | - | chr3_4:46808649-46808668 | None:intergenic | 40.0% | |
TTTGAGAAGAGATGGAACAC+AGG | + | chr3_4:46808808-46808827 | Msa0503540:intron | 40.0% | |
TTGAGAAGAGATGGAACACA+GGG | + | chr3_4:46808809-46808828 | Msa0503540:intron | 40.0% | |
GATGGGAGAATGAAAGAAGA+TGG | + | chr3_4:46808883-46808902 | Msa0503540:intron | 40.0% | |
GGAGAATGAAAGAAGATGGA+GGG | + | chr3_4:46808887-46808906 | Msa0503540:intron | 40.0% | |
ACAACAATGTCCTTGCTTTG+TGG | - | chr3_4:46808931-46808950 | None:intergenic | 40.0% | |
CTAACGGAAAGGACTAAAAG+TGG | + | chr3_4:46809050-46809069 | Msa0503540:intron | 40.0% | |
TTGAATTCACAACTCCCTAG+CGG | - | chr3_4:46809768-46809787 | None:intergenic | 40.0% | |
AACTCTCATCGGACTTTCAT+CGG | - | chr3_4:46809997-46810016 | None:intergenic | 40.0% | |
TCATGTCAGTGAAATAGGCT+TGG | - | chr3_4:46810032-46810051 | None:intergenic | 40.0% | |
CTTCTTTGTCTTGGGATTGT+TGG | - | chr3_4:46810350-46810369 | None:intergenic | 40.0% | |
GAGTAGACACTTCTTTGTCT+TGG | - | chr3_4:46810359-46810378 | None:intergenic | 40.0% | |
AAAGCTGCAACAGAGTAACT+TGG | + | chr3_4:46810551-46810570 | Msa0503540:intron | 40.0% | |
AAGCTGCAACAGAGTAACTT+GGG | + | chr3_4:46810552-46810571 | Msa0503540:intron | 40.0% | |
TGTCTTGGAGCAAAAGAAAG+AGG | - | chr3_4:46810719-46810738 | None:intergenic | 40.0% | |
!! | ATATATGGTGGAAGGTGTCT+TGG | - | chr3_4:46810734-46810753 | None:intergenic | 40.0% |
AAGCAAAGATTCAAGTGTGG+GGG | - | chr3_4:46810897-46810916 | None:intergenic | 40.0% | |
CAAGCAAAGATTCAAGTGTG+GGG | - | chr3_4:46810898-46810917 | None:intergenic | 40.0% | |
GACAAGCAAAGATTCAAGTG+TGG | - | chr3_4:46810900-46810919 | None:intergenic | 40.0% | |
TTTGCTTGTCCTCAAGCAAA+AGG | + | chr3_4:46810910-46810929 | Msa0503540:intron | 40.0% | |
! | TATCCATTGCCTTTTGCTTG+AGG | - | chr3_4:46810922-46810941 | None:intergenic | 40.0% |
!! | TTGGGTTGAATAGGTTCACA+AGG | - | chr3_4:46811042-46811061 | None:intergenic | 40.0% |
! | CCTCGGTTACTTTAGCATTA+AGG | - | chr3_4:46811149-46811168 | None:intergenic | 40.0% |
CCTTAATGCTAAAGTAACCG+AGG | + | chr3_4:46811146-46811165 | Msa0503540:intron | 40.0% | |
! | GATTTTGAATCTAGGGGGAA+AGG | - | chr3_4:46811308-46811327 | None:intergenic | 40.0% |
! | AGGGTGATTTTGAATCTAGG+GGG | - | chr3_4:46811313-46811332 | None:intergenic | 40.0% |
TATTTGTTTCATCTCCGCGT+AGG | + | chr3_4:46811353-46811372 | Msa0503540:intron | 40.0% | |
ATCCAAAAAGACTTCCTACG+CGG | - | chr3_4:46811370-46811389 | None:intergenic | 40.0% | |
ACCACCACAATTAGGAAGTT+AGG | + | chr3_4:46811453-46811472 | Msa0503540:intron | 40.0% | |
CCACCACAATTAGGAAGTTA+GGG | + | chr3_4:46811454-46811473 | Msa0503540:intron | 40.0% | |
ACTTGCTCAAAGATTGCAAC+CGG | + | chr3_4:46811665-46811684 | Msa0503540:intron | 40.0% | |
ACAATGCTTCTCCTAAGTGT+GGG | - | chr3_4:46811943-46811962 | None:intergenic | 40.0% | |
GAAGGTGATGTATCATGTTG+TGG | + | chr3_4:46812126-46812145 | Msa0503540:intron | 40.0% | |
AAGCTATAATGATGAACGGC+GGG | - | chr3_4:46812264-46812283 | None:intergenic | 40.0% | |
GAAGCTATAATGATGAACGG+CGG | - | chr3_4:46812265-46812284 | None:intergenic | 40.0% | |
TTGCACCATGAACAAGAAAC+CGG | - | chr3_4:46812290-46812309 | None:intergenic | 40.0% | |
TCACGATCATTATGTACCTG+TGG | + | chr3_4:46812344-46812363 | Msa0503540:intron | 40.0% | |
CACGATCATTATGTACCTGT+GGG | + | chr3_4:46812345-46812364 | Msa0503540:intron | 40.0% | |
TTATGTTGGTACTAACCCAC+AGG | - | chr3_4:46812363-46812382 | None:intergenic | 40.0% | |
!! | GGATTAGTTATGTCCGGATT+AGG | + | chr3_4:46812404-46812423 | Msa0503540:intron | 40.0% |
GTAATTGTGAGTAGGTTCGT+GGG | + | chr3_4:46812472-46812491 | Msa0503540:intron | 40.0% | |
GAGGATTAATGAGCTGTTGT+GGG | - | chr3_4:46812715-46812734 | None:intergenic | 40.0% | |
TGAGGATTAATGAGCTGTTG+TGG | - | chr3_4:46812716-46812735 | None:intergenic | 40.0% | |
! | AGTGAGCAAGATGATGATGA+GGG | - | chr3_4:46812840-46812859 | None:intergenic | 40.0% |
! | TAGTGAGCAAGATGATGATG+AGG | - | chr3_4:46812841-46812860 | None:intergenic | 40.0% |
!! | GTTGTTTGTTGATGATGTGC+AGG | - | chr3_4:46812868-46812887 | None:intergenic | 40.0% |
! | CAACAAATTTGCTTCCACCA+CGG | + | chr3_4:46812884-46812903 | Msa0503540:intron | 40.0% |
GAGGGGATCAAACAAATTGA+GGG | - | chr3_4:46813038-46813057 | None:intergenic | 40.0% | |
TGAGGGGATCAAACAAATTG+AGG | - | chr3_4:46813039-46813058 | None:intergenic | 40.0% | |
!! | ATAGGTAGGCATTTTGGCAT+TGG | - | chr3_4:46813068-46813087 | None:intergenic | 40.0% |
GGTGGCATCATTACATACAT+AGG | - | chr3_4:46813086-46813105 | None:intergenic | 40.0% | |
GGTAAAGGAGATATAGTGGT+GGG | - | chr3_4:46813107-46813126 | None:intergenic | 40.0% | |
CACCACTATATCTCCTTTAC+CGG | + | chr3_4:46813106-46813125 | Msa0503540:intron | 40.0% | |
TTGATTACCCTAGACGTTGT+CGG | - | chr3_4:46813143-46813162 | None:intergenic | 40.0% | |
CGATGAGCAGTTCATGTTAT+GGG | - | chr3_4:46813208-46813227 | None:intergenic | 40.0% | |
CCATAACATGAACTGCTCAT+CGG | + | chr3_4:46813206-46813225 | Msa0503540:intron | 40.0% | |
!!! | GTTGGTAGTTATCCGGTTTT+AGG | + | chr3_4:46813254-46813273 | Msa0503540:intron | 40.0% |
!!! | TAGTTATCCGGTTTTAGGCT+AGG | + | chr3_4:46813259-46813278 | Msa0503540:intron | 40.0% |
!!! | AGTTATCCGGTTTTAGGCTA+GGG | + | chr3_4:46813260-46813279 | Msa0503540:intron | 40.0% |
! | ACCTTAGGTTTTGCAAACGA+GGG | - | chr3_4:46813307-46813326 | None:intergenic | 40.0% |
! | TACCTTAGGTTTTGCAAACG+AGG | - | chr3_4:46813308-46813327 | None:intergenic | 40.0% |
! | CAGCACTTTTGTGATACCTT+AGG | - | chr3_4:46813322-46813341 | None:intergenic | 40.0% |
TATAGGCTTATAGGAAGGCT+AGG | - | chr3_4:46813499-46813518 | None:intergenic | 40.0% | |
CAAGCACAAGCAAAGAATCT+TGG | - | chr3_4:46813643-46813662 | None:intergenic | 40.0% | |
AAGAAACCAGCAAGCTCTTT+CGG | - | chr3_4:46813685-46813704 | None:intergenic | 40.0% | |
CATATGGCTTCAAGAAGAAG+TGG | - | chr3_4:46813709-46813728 | None:intergenic | 40.0% | |
TCTTGAAGCCATATGACCTT+TGG | + | chr3_4:46813714-46813733 | Msa0503540:intron | 40.0% | |
AATCCACACCAAAGGTCATA+TGG | - | chr3_4:46813725-46813744 | None:intergenic | 40.0% | |
! | ATATGACCTTTGGTGTGGAT+TGG | + | chr3_4:46813724-46813743 | Msa0503540:intron | 40.0% |
TCAAAACCAATCCACACCAA+AGG | - | chr3_4:46813733-46813752 | None:intergenic | 40.0% | |
!!! | TTGGTGTGGATTGGTTTTGA+AGG | + | chr3_4:46813733-46813752 | Msa0503540:intron | 40.0% |
!!! | GGTTTTGAAGGTTTAGGGTT+TGG | + | chr3_4:46813745-46813764 | Msa0503540:intron | 40.0% |
!! | GGAAAAGATTGGTTTAGGGT+TGG | + | chr3_4:46813781-46813800 | Msa0503540:intron | 40.0% |
!! | AAGGTTGATGGGTTTGGTTA+TGG | + | chr3_4:46813819-46813838 | Msa0503540:intron | 40.0% |
TGGTGAATTATAGGTTTGGG+TGG | + | chr3_4:46813891-46813910 | Msa0503540:intron | 40.0% | |
! | GGTTTGAGGTTTGAAGGTTA+TGG | + | chr3_4:46814014-46814033 | Msa0503540:intron | 40.0% |
GAGATGAAAGAGGTTTGTGT+TGG | + | chr3_4:46814057-46814076 | Msa0503540:intron | 40.0% | |
GGTTTGTGTTGGAGAATGAA+TGG | + | chr3_4:46814068-46814087 | Msa0503540:intron | 40.0% | |
TTGGGTTTATAGAAGGCTAG+AGG | + | chr3_4:46814106-46814125 | Msa0503540:intron | 40.0% | |
GTTTATAGAAGGCTAGAGGT+CGG | + | chr3_4:46814110-46814129 | Msa0503540:intron | 40.0% | |
TTTATAGAAGGCTAGAGGTC+GGG | + | chr3_4:46814111-46814130 | Msa0503540:intron | 40.0% | |
CGATACCTAATCTCTCACTA+AGG | + | chr3_4:46814425-46814444 | Msa0503540:intron | 40.0% | |
TTGTCCCTTAGTGAGAGATT+AGG | - | chr3_4:46814433-46814452 | None:intergenic | 40.0% | |
AATCTCTCACTAAGGGACAA+TGG | + | chr3_4:46814433-46814452 | Msa0503540:intron | 40.0% | |
! | AAGAACCACATGTGATTTGG+GGG | - | chr3_4:46814476-46814495 | None:intergenic | 40.0% |
GTCTTGGATCCTATGACATA+TGG | + | chr3_4:46814502-46814521 | Msa0503540:intron | 40.0% | |
GGATCCTATGACATATGGTA+TGG | + | chr3_4:46814507-46814526 | Msa0503540:intron | 40.0% | |
! | TCATATGGTGGTGATATGTG+AGG | + | chr3_4:46814649-46814668 | Msa0503540:intron | 40.0% |
! | TTTTCTTGGTTTCCACAACG+GGG | + | chr3_4:46814734-46814753 | Msa0503540:intron | 40.0% |
TCTAATTGCTTACCATCCCT+AGG | + | chr3_4:46814760-46814779 | Msa0503540:intron | 40.0% | |
AATGCTATTACACCTAGGGA+TGG | - | chr3_4:46814775-46814794 | None:intergenic | 40.0% | |
!!! | ATTTATTGGGCTTTTGGGGT+TGG | + | chr3_4:46814792-46814811 | Msa0503540:intron | 40.0% |
! | TTACTTGTTGGGCTACTTGA+GGG | + | chr3_4:46814860-46814879 | Msa0503540:intron | 40.0% |
! | CAAGAGTTTAAAGCCAAAGC+TGG | - | chr3_4:46814967-46814986 | None:intergenic | 40.0% |
!! | CAGCTTTGGCTTTAAACTCT+TGG | + | chr3_4:46814965-46814984 | Msa0503540:intron | 40.0% |
AGTCTCTCAAAAATCCGACT+TGG | - | chr3_4:46815034-46815053 | None:intergenic | 40.0% | |
!! | CGGATTTTTGAGAGACTCTT+TGG | + | chr3_4:46815037-46815056 | Msa0503540:intron | 40.0% |
CTTTGGTTGTTTGCAAAACC+GGG | + | chr3_4:46815054-46815073 | Msa0503540:intron | 40.0% | |
AGCAGGTAAACTATGGGTTT+AGG | - | chr3_4:46815137-46815156 | None:intergenic | 40.0% | |
AAACCCATAGTTTACCTGCT+CGG | + | chr3_4:46815137-46815156 | Msa0503540:intron | 40.0% | |
! | ACTGGTGTTGAATGTCAACT+AGG | - | chr3_4:46815180-46815199 | None:intergenic | 40.0% |
AAGCTTTACAAGGTGGTGAA+AGG | + | chr3_4:46815217-46815236 | Msa0503540:intron | 40.0% | |
AGCTTTACAAGGTGGTGAAA+GGG | + | chr3_4:46815218-46815237 | Msa0503540:intron | 40.0% | |
GGGAAAAGGTCCATTGATAA+AGG | + | chr3_4:46815241-46815260 | Msa0503540:intron | 40.0% | |
TTGAATTCACAACTCCGTAG+CGG | - | chr3_4:46815658-46815677 | None:intergenic | 40.0% | |
AACTCTCATCGGACTTTCAT+CGG | - | chr3_4:46809997-46810016 | None:intergenic | 40.0% | |
TCATGTCAGTGAAATAGGCT+TGG | - | chr3_4:46810032-46810051 | None:intergenic | 40.0% | |
CTTCTTTGTCTTGGGATTGT+TGG | - | chr3_4:46810350-46810369 | None:intergenic | 40.0% | |
GAGTAGACACTTCTTTGTCT+TGG | - | chr3_4:46810359-46810378 | None:intergenic | 40.0% | |
AAAGCTGCAACAGAGTAACT+TGG | + | chr3_4:46810551-46810570 | Msa0503540:intron | 40.0% | |
AAGCTGCAACAGAGTAACTT+GGG | + | chr3_4:46810552-46810571 | Msa0503540:intron | 40.0% | |
TGTCTTGGAGCAAAAGAAAG+AGG | - | chr3_4:46810719-46810738 | None:intergenic | 40.0% | |
!! | ATATATGGTGGAAGGTGTCT+TGG | - | chr3_4:46810734-46810753 | None:intergenic | 40.0% |
ATGACTCATCAGTATACCTG+TGG | + | chr3_4:46816769-46816788 | Msa0503540:intron | 40.0% | |
TGACTCATCAGTATACCTGT+GGG | + | chr3_4:46816770-46816789 | Msa0503540:intron | 40.0% | |
! | GTTTTGCTAAGCAAATGCTG+CGG | + | chr3_4:46816933-46816952 | Msa0503540:CDS | 40.0% |
AAAATCCATACTTCAGACCC+TGG | - | chr3_4:46817051-46817070 | None:intergenic | 40.0% | |
! | AAGGAAAAGCACAAATGGAG+TGG | + | chr3_4:46817555-46817574 | Msa0503540:CDS | 40.0% |
GTTCCCAAGTACGATTCATA+TGG | - | chr3_4:46817609-46817628 | None:intergenic | 40.0% | |
TATGAATCGTACTTGGGAAC+TGG | + | chr3_4:46817609-46817628 | Msa0503540:CDS | 40.0% | |
TAGTAACACGGATATCAGTC+TGG | - | chr3_4:46817891-46817910 | None:intergenic | 40.0% | |
! | AGACTGATATCCGTGTTACT+AGG | + | chr3_4:46817890-46817909 | Msa0503540:intron | 40.0% |
! | GTCTATCCTTCCGATTTTCA+AGG | - | chr3_4:46817925-46817944 | None:intergenic | 40.0% |
TGCAGGAGATAACAACAATG+AGG | + | chr3_4:46817998-46818017 | Msa0503540:intron | 40.0% | |
CAGGAGAACCATTATTGTTG+AGG | + | chr3_4:46818232-46818251 | Msa0503540:CDS | 40.0% | |
TCTAATCCAAGGGATGGATA+AGG | + | chr3_4:46818304-46818323 | Msa0503540:CDS | 40.0% | |
TATCTTCCTTATCCATCCCT+TGG | - | chr3_4:46818313-46818332 | None:intergenic | 40.0% | |
CTACCAAAAGTGATCGAGAT+TGG | + | chr3_4:46818354-46818373 | Msa0503540:CDS | 40.0% | |
! | GTTCCAATCTCGATCACTTT+TGG | - | chr3_4:46818360-46818379 | None:intergenic | 40.0% |
GATCGAGATTGGAACATATC+TGG | + | chr3_4:46818365-46818384 | Msa0503540:CDS | 40.0% | |
ATCCAACGACCATTGATATC+AGG | + | chr3_4:46818542-46818561 | Msa0503540:intron | 40.0% | |
ACCAATCAATAGTCGTTGAG+CGG | + | chr3_4:46818616-46818635 | Msa0503540:intron | 40.0% | |
TTCAACCAAAGGAGATATCG+AGG | + | chr3_4:46818761-46818780 | Msa0503540:intron | 40.0% | |
TCAACCAAAGGAGATATCGA+GGG | + | chr3_4:46818762-46818781 | Msa0503540:intron | 40.0% | |
AAAACCAACCCGATCATGAA+TGG | + | chr3_4:46818856-46818875 | Msa0503540:intron | 40.0% | |
GTTCTAACTGTGAAATGCTC+TGG | - | chr3_4:46819034-46819053 | None:intergenic | 40.0% | |
TGGTACAAAAAGGCAGTGAA+TGG | + | chr3_4:46819107-46819126 | Msa0503540:CDS | 40.0% | |
! | TTCTAGAAGTGAGTATGGAC+AGG | - | chr3_4:46819330-46819349 | None:intergenic | 40.0% |
! | GTCCATACTCACTTCTAGAA+AGG | + | chr3_4:46819330-46819349 | Msa0503540:CDS | 40.0% |
CTACTGCATACAAAGTCACA+GGG | - | chr3_4:46819522-46819541 | None:intergenic | 40.0% | |
! | AGAAGTTATCACGGGTTTTG+AGG | + | chr3_4:46819789-46819808 | Msa0503540:three_prime_UTR | 40.0% |
TGACAGCAGCACATACATCA+CGG | + | chr3_4:46804519-46804538 | Msa0503540:CDS | 45.0% | |
!! | CTCAACTTTAGCTTGTCCTC+TGG | - | chr3_4:46805317-46805336 | None:intergenic | 45.0% |
CAGAGGACAAGCTAAAGTTG+AGG | + | chr3_4:46805315-46805334 | Msa0503540:intron | 45.0% | |
GGCCGTAAATGATGACAATG+TGG | + | chr3_4:46805445-46805464 | Msa0503540:CDS | 45.0% | |
TGAATCCTCTTGATGCTGCA+AGG | - | chr3_4:46805562-46805581 | None:intergenic | 45.0% | |
! | AAAAGCGATTGTGGTGCTGA+TGG | + | chr3_4:46805731-46805750 | Msa0503540:CDS | 45.0% |
!! | AAAGCGATTGTGGTGCTGAT+GGG | + | chr3_4:46805732-46805751 | Msa0503540:CDS | 45.0% |
!!! | GCAATCCGGAGGGAATTTTT+TGG | + | chr3_4:46805812-46805831 | Msa0503540:CDS | 45.0% |
GTCAATGACTACATGCATCC+AGG | + | chr3_4:46805907-46805926 | Msa0503540:intron | 45.0% | |
GCAAGCAATCAGCATATCAG+TGG | - | chr3_4:46806091-46806110 | None:intergenic | 45.0% | |
AGGTGGGAATTCACACTTGA+TGG | - | chr3_4:46806569-46806588 | None:intergenic | 45.0% | |
!! | AGTCTTGGTTCGGTTTAGTG+GGG | - | chr3_4:46806618-46806637 | None:intergenic | 45.0% |
!! | GAGTCTTGGTTCGGTTTAGT+GGG | - | chr3_4:46806619-46806638 | None:intergenic | 45.0% |
!! | AGAGTCTTGGTTCGGTTTAG+TGG | - | chr3_4:46806620-46806639 | None:intergenic | 45.0% |
!! | CATCTTGCATCCGCTTTTGA+AGG | - | chr3_4:46807215-46807234 | None:intergenic | 45.0% |
! | GCAAGATGATATGGTGGAAG+AGG | + | chr3_4:46807227-46807246 | Msa0503540:CDS | 45.0% |
TTGATACCCTACCGAACTTC+AGG | - | chr3_4:46807398-46807417 | None:intergenic | 45.0% | |
AACCATATACGACCCGTTTC+CGG | - | chr3_4:46808428-46808447 | None:intergenic | 45.0% | |
AATTTGCAGCGACCCATTTC+CGG | - | chr3_4:46808461-46808480 | None:intergenic | 45.0% | |
GGTAACGAGAAAAGAGGGAA+GGG | - | chr3_4:46808557-46808576 | None:intergenic | 45.0% | |
AGAGAGAGAGAGAAAAGAGG+GGG | - | chr3_4:46808578-46808597 | None:intergenic | 45.0% | |
GAGAGAGAGAGAGAAAAGAG+GGG | - | chr3_4:46808579-46808598 | None:intergenic | 45.0% | |
GAGAGAGAGAGAGAGAAAAG+AGG | - | chr3_4:46808581-46808600 | None:intergenic | 45.0% | |
AGAGAGAAAGGAGAAGAGAG+GGG | - | chr3_4:46808648-46808667 | None:intergenic | 45.0% | |
GAAGAGAGAAAGGAGAAGAG+AGG | - | chr3_4:46808650-46808669 | None:intergenic | 45.0% | |
!! | CTGGTTGTGTGTTGTTTGTC+TGG | + | chr3_4:46808768-46808787 | Msa0503540:intron | 45.0% |
GGGAGAATGAAAGAAGATGG+AGG | + | chr3_4:46808886-46808905 | Msa0503540:intron | 45.0% | |
! | TGATGGTGAACCACAAAGCA+AGG | + | chr3_4:46808918-46808937 | Msa0503540:intron | 45.0% |
!! | AAGAAGAGTATCGTTCCGCT+AGG | + | chr3_4:46809750-46809769 | Msa0503540:intron | 45.0% |
!! | AGAAGAGTATCGTTCCGCTA+GGG | + | chr3_4:46809751-46809770 | Msa0503540:intron | 45.0% |
ACTTTCATCGGAAAGGTGAG+GGG | - | chr3_4:46809985-46810004 | None:intergenic | 45.0% | |
GACTTTCATCGGAAAGGTGA+GGG | - | chr3_4:46809986-46810005 | None:intergenic | 45.0% | |
TCATCGGACTTTCATCGGAA+AGG | - | chr3_4:46809992-46810011 | None:intergenic | 45.0% | |
TCAAACTGTGGAAGCGAAAG+CGG | - | chr3_4:46810223-46810242 | None:intergenic | 45.0% | |
CTAGATTCACCGTCTTAACG+TGG | - | chr3_4:46810257-46810276 | None:intergenic | 45.0% | |
AAAAGCAGCAAAAGTGGTCC+TGG | + | chr3_4:46810582-46810601 | Msa0503540:intron | 45.0% | |
TCTCTACCAAGTCAGAAGCT+TGG | - | chr3_4:46810647-46810666 | None:intergenic | 45.0% | |
TGGAGCAAAAGAAAGAGGAC+TGG | - | chr3_4:46810714-46810733 | None:intergenic | 45.0% | |
TGTCCTCAAGCAAAAGGCAA+TGG | + | chr3_4:46810916-46810935 | Msa0503540:intron | 45.0% | |
TACAGGAGCAAGAAAAGGGT+TGG | - | chr3_4:46811095-46811114 | None:intergenic | 45.0% | |
ATCCTCGTAGGAAGTCTTCT+CGG | + | chr3_4:46811272-46811291 | Msa0503540:intron | 45.0% | |
TTCATCAATGCTAGGGGGAA+AGG | - | chr3_4:46811401-46811420 | None:intergenic | 45.0% | |
CCCTAACTTCCTAATTGTGG+TGG | - | chr3_4:46811457-46811476 | None:intergenic | 45.0% | |
CTTGCTCAAAGATTGCAACC+GGG | + | chr3_4:46811666-46811685 | Msa0503540:intron | 45.0% | |
!! | TCTCCAATGAGAAAAGCACC+CGG | - | chr3_4:46811687-46811706 | None:intergenic | 45.0% |
AATGCTTCTCCTAAGTGTGG+GGG | - | chr3_4:46811941-46811960 | None:intergenic | 45.0% | |
CAATGCTTCTCCTAAGTGTG+GGG | - | chr3_4:46811942-46811961 | None:intergenic | 45.0% | |
GACAATGCTTCTCCTAAGTG+TGG | - | chr3_4:46811944-46811963 | None:intergenic | 45.0% | |
! | AAGTAGACCTTTGGAGGTGA+AGG | + | chr3_4:46812108-46812127 | Msa0503540:intron | 45.0% |
TACATCACCTTCACCTCCAA+AGG | - | chr3_4:46812118-46812137 | None:intergenic | 45.0% | |
! | AGCACCGAGCAACAAAGATA+AGG | - | chr3_4:46812212-46812231 | None:intergenic | 45.0% |
!! | TTCCACCGGTTTCTTGTTCA+TGG | + | chr3_4:46812282-46812301 | Msa0503540:intron | 45.0% |
! | GATGGTAATGAAGAGGAGGT+AGG | - | chr3_4:46812320-46812339 | None:intergenic | 45.0% |
! | AGCAAATTTTCCACCACCTC+CGG | + | chr3_4:46812383-46812402 | Msa0503540:intron | 45.0% |
!! | ACCTCCGGATTAGTTATGTC+CGG | + | chr3_4:46812398-46812417 | Msa0503540:intron | 45.0% |
GGTAATTGTGAGTAGGTTCG+TGG | + | chr3_4:46812471-46812490 | Msa0503540:intron | 45.0% | |
CAAGGGATCAAGAGGATAGA+GGG | - | chr3_4:46812544-46812563 | None:intergenic | 45.0% | |
TCAAGGGATCAAGAGGATAG+AGG | - | chr3_4:46812545-46812564 | None:intergenic | 45.0% | |
GTGTGAATCAAGGGATCAAG+AGG | - | chr3_4:46812552-46812571 | None:intergenic | 45.0% | |
TTGGGGTGAGTGTGAATCAA+GGG | - | chr3_4:46812561-46812580 | None:intergenic | 45.0% | |
! | TTTGGGGTGAGTGTGAATCA+AGG | - | chr3_4:46812562-46812581 | None:intergenic | 45.0% |
GGATAGAGGTAGGAATGATG+AGG | - | chr3_4:46812734-46812753 | None:intergenic | 45.0% | |
TAGCACCTTCTCCTACATCA+TGG | + | chr3_4:46812796-46812815 | Msa0503540:intron | 45.0% | |
TTGCACCATGATGTAGGAGA+AGG | - | chr3_4:46812804-46812823 | None:intergenic | 45.0% | |
! | GCTAACTTGCACCATGATGT+AGG | - | chr3_4:46812810-46812829 | None:intergenic | 45.0% |
!! | AACTTGAGTTGGTGATGGAG+TGG | + | chr3_4:46812954-46812973 | Msa0503540:intron | 45.0% |
!! | TTTGGCATTGGTGAGGATGA+GGG | - | chr3_4:46813056-46813075 | None:intergenic | 45.0% |
!!! | TTTTGGCATTGGTGAGGATG+AGG | - | chr3_4:46813057-46813076 | None:intergenic | 45.0% |
!!! | TAGGCATTTTGGCATTGGTG+AGG | - | chr3_4:46813063-46813082 | None:intergenic | 45.0% |
! | AAAGGAGATATAGTGGTGGG+TGG | - | chr3_4:46813104-46813123 | None:intergenic | 45.0% |
CGGTAAAGGAGATATAGTGG+TGG | - | chr3_4:46813108-46813127 | None:intergenic | 45.0% | |
ACTATATCTCCTTTACCGGC+CGG | + | chr3_4:46813110-46813129 | Msa0503540:intron | 45.0% | |
!! | TCTAGTACCGACAACGTCTA+GGG | + | chr3_4:46813133-46813152 | Msa0503540:intron | 45.0% |
!! | AAAAGCAAGTGTTGACTGGG+TGG | + | chr3_4:46813169-46813188 | Msa0503540:intron | 45.0% |
CCGATGAGCAGTTCATGTTA+TGG | - | chr3_4:46813209-46813228 | None:intergenic | 45.0% | |
! | TCGGTTCTAGTGTTCCCAAA+AGG | + | chr3_4:46813225-46813244 | Msa0503540:intron | 45.0% |
! | CGGTTCTAGTGTTCCCAAAA+GGG | + | chr3_4:46813226-46813245 | Msa0503540:intron | 45.0% |
! | CCTTAGGTTTTGCAAACGAG+GGG | - | chr3_4:46813306-46813325 | None:intergenic | 45.0% |
TGAGAATCGGGATATCGAGA+AGG | + | chr3_4:46813553-46813572 | Msa0503540:intron | 45.0% | |
GGATATCGAGAAGGATGCAA+GGG | + | chr3_4:46813562-46813581 | Msa0503540:intron | 45.0% | |
TGCTTGTGCTTGCTTCTTTG+AGG | + | chr3_4:46813651-46813670 | Msa0503540:intron | 45.0% | |
GCTTGTGCTTGCTTCTTTGA+GGG | + | chr3_4:46813652-46813671 | Msa0503540:intron | 45.0% | |
AAGCCATATGACCTTTGGTG+TGG | + | chr3_4:46813719-46813738 | Msa0503540:intron | 45.0% | |
GGGTTTGGGAAGATATTTGG+TGG | + | chr3_4:46813760-46813779 | Msa0503540:intron | 45.0% | |
TTGATGGGAGGGTTTGGATT+AGG | + | chr3_4:46813927-46813946 | Msa0503540:intron | 45.0% | |
ACTTTAAACGAGCGCTTCGT+GGG | - | chr3_4:46814373-46814392 | None:intergenic | 45.0% | |
ATTCTCCCCCAAATCACATG+TGG | + | chr3_4:46814468-46814487 | Msa0503540:intron | 45.0% | |
TTGGACTCATCAAACCCTTG+TGG | + | chr3_4:46814610-46814629 | Msa0503540:intron | 45.0% | |
TGGACTCATCAAACCCTTGT+GGG | + | chr3_4:46814611-46814630 | Msa0503540:intron | 45.0% | |
TGGGGAAGAGGTTACTTGTT+GGG | + | chr3_4:46814849-46814868 | Msa0503540:intron | 45.0% | |
! | GTTACTTGTTGGGCTACTTG+AGG | + | chr3_4:46814859-46814878 | Msa0503540:intron | 45.0% |
CAATAGGCTTTCCGCAAATG+TGG | - | chr3_4:46814926-46814945 | None:intergenic | 45.0% | |
GGACAACAAATATCACCACC+CGG | - | chr3_4:46815075-46815094 | None:intergenic | 45.0% | |
AACCCATAGTTTACCTGCTC+GGG | + | chr3_4:46815138-46815157 | Msa0503540:intron | 45.0% | |
GCTTTACAAGGTGGTGAAAG+GGG | + | chr3_4:46815219-46815238 | Msa0503540:intron | 45.0% | |
CTTTACAAGGTGGTGAAAGG+GGG | + | chr3_4:46815220-46815239 | Msa0503540:intron | 45.0% | |
TTTACAAGGTGGTGAAAGGG+GGG | + | chr3_4:46815221-46815240 | Msa0503540:intron | 45.0% | |
!! | AGAAGAGTATCGTTCCGCTA+CGG | + | chr3_4:46809751-46809770 | Msa0503540:intron | 45.0% |
ACTTTCATCGGAAAGGTGAG+GGG | - | chr3_4:46809985-46810004 | None:intergenic | 45.0% | |
GACTTTCATCGGAAAGGTGA+GGG | - | chr3_4:46809986-46810005 | None:intergenic | 45.0% | |
TCATCGGACTTTCATCGGAA+AGG | - | chr3_4:46809992-46810011 | None:intergenic | 45.0% | |
TCAAACTGTGGAAGCGAAAG+CGG | - | chr3_4:46810223-46810242 | None:intergenic | 45.0% | |
CTAGATTCACCGTCTTAACG+TGG | - | chr3_4:46810257-46810276 | None:intergenic | 45.0% | |
AAAAGCAGCAAAAGTGGTCC+TGG | + | chr3_4:46810582-46810601 | Msa0503540:intron | 45.0% | |
TCTCTACCAAGTCAGAAGCT+TGG | - | chr3_4:46810647-46810666 | None:intergenic | 45.0% | |
TGGAGCAAAAGAAAGAGGAC+TGG | - | chr3_4:46810714-46810733 | None:intergenic | 45.0% | |
!!! | TCAACTTTTAGGGTTCCCAC+AGG | - | chr3_4:46816788-46816807 | None:intergenic | 45.0% |
! | ATCTATACCCTTGGCCTTTC+AGG | + | chr3_4:46817278-46817297 | Msa0503540:CDS | 45.0% |
GACACTTACCAACTCCTGAA+AGG | - | chr3_4:46817295-46817314 | None:intergenic | 45.0% | |
GTCTGACATGAACACAACCT+CGG | + | chr3_4:46817346-46817365 | Msa0503540:intron | 45.0% | |
!! | ACTCACATCTCGTGTTGGTT+TGG | - | chr3_4:46817637-46817656 | None:intergenic | 45.0% |
AAACCAACACGAGATGTGAG+TGG | + | chr3_4:46817636-46817655 | Msa0503540:CDS | 45.0% | |
GACTCCCTTCCCTTGAAAAT+CGG | + | chr3_4:46817912-46817931 | Msa0503540:intron | 45.0% | |
!! | CCTTCCGATTTTCAAGGGAA+GGG | - | chr3_4:46817919-46817938 | None:intergenic | 45.0% |
!! | TCCTTCCGATTTTCAAGGGA+AGG | - | chr3_4:46817920-46817939 | None:intergenic | 45.0% |
GGACTGTCTGATCTTGTTCA+AGG | - | chr3_4:46818469-46818488 | None:intergenic | 45.0% | |
GTCCTGATATCAATGGTCGT+TGG | - | chr3_4:46818547-46818566 | None:intergenic | 45.0% | |
ACCGCTCAACGACTATTGAT+TGG | - | chr3_4:46818620-46818639 | None:intergenic | 45.0% | |
! | GTCGTTGAGCGGTTCTTTTT+AGG | + | chr3_4:46818627-46818646 | Msa0503540:intron | 45.0% |
GGGTCTAAGAGACATTGTGA+GGG | - | chr3_4:46818653-46818672 | None:intergenic | 45.0% | |
TGGGTCTAAGAGACATTGTG+AGG | - | chr3_4:46818654-46818673 | None:intergenic | 45.0% | |
CCTTTGGTTGAATACCCTCT+GGG | - | chr3_4:46818753-46818772 | None:intergenic | 45.0% | |
TCCTTTGGTTGAATACCCTC+TGG | - | chr3_4:46818754-46818773 | None:intergenic | 45.0% | |
CAATCCATTCATGATCGGGT+TGG | - | chr3_4:46818863-46818882 | None:intergenic | 45.0% | |
CAACCCGATCATGAATGGAT+TGG | + | chr3_4:46818861-46818880 | Msa0503540:intron | 45.0% | |
TGATGTAGCGAAGGAAACAC+CGG | - | chr3_4:46819179-46819198 | None:intergenic | 45.0% | |
TACAGTGCTTGATGTAGCGA+AGG | - | chr3_4:46819188-46819207 | None:intergenic | 45.0% | |
AGCGACGAACATTGCAACAA+TGG | - | chr3_4:46819422-46819441 | None:intergenic | 45.0% | |
!!! | ATGTTCGTCGCTTTTTGCTC+TGG | + | chr3_4:46819430-46819449 | Msa0503540:CDS | 45.0% |
GCTACTGCATACAAAGTCAC+AGG | - | chr3_4:46819523-46819542 | None:intergenic | 45.0% | |
ATCACGTGACTTTGGCACTT+TGG | - | chr3_4:46819587-46819606 | None:intergenic | 45.0% | |
AGTGCCAAAGTCACGTGATA+AGG | + | chr3_4:46819588-46819607 | Msa0503540:CDS | 45.0% | |
GTGCCAAAGTCACGTGATAA+GGG | + | chr3_4:46819589-46819608 | Msa0503540:CDS | 45.0% | |
TGCCAAAGTCACGTGATAAG+GGG | + | chr3_4:46819590-46819609 | Msa0503540:CDS | 45.0% | |
AGCAGCACATACATCACGGA+AGG | + | chr3_4:46804523-46804542 | Msa0503540:CDS | 50.0% | |
CTTGATGCTGCAAGGTGCAA+AGG | - | chr3_4:46805554-46805573 | None:intergenic | 50.0% | |
TTGCACCTTGCAGCATCAAG+AGG | + | chr3_4:46805554-46805573 | Msa0503540:CDS | 50.0% | |
TTCTTCACTGTGCAATCCGG+AGG | + | chr3_4:46805801-46805820 | Msa0503540:CDS | 50.0% | |
TCTTCACTGTGCAATCCGGA+GGG | + | chr3_4:46805802-46805821 | Msa0503540:CDS | 50.0% | |
!! | GTCTTGGTTCGGTTTAGTGG+GGG | - | chr3_4:46806617-46806636 | None:intergenic | 50.0% |
GTTGTTGCTCTCGTGACATC+CGG | - | chr3_4:46806663-46806682 | None:intergenic | 50.0% | |
!! | TGCTTTAGGACCGCAAGAGA+TGG | + | chr3_4:46806690-46806709 | Msa0503540:intron | 50.0% |
TGTTGCGTCTCCATCTCTTG+CGG | - | chr3_4:46806703-46806722 | None:intergenic | 50.0% | |
!! | CATCCGCTTTTGAAGGCTGA+GGG | - | chr3_4:46807208-46807227 | None:intergenic | 50.0% |
GCGGATGCAAGATGATATGG+TGG | + | chr3_4:46807221-46807240 | Msa0503540:CDS | 50.0% | |
AGTGAATCGAACAACGGCGA+CGG | - | chr3_4:46808374-46808393 | None:intergenic | 50.0% | |
CACTGGAAACGGGTCGTATT+TGG | + | chr3_4:46808390-46808409 | Msa0503540:intron | 50.0% | |
AGGGATGGGAGAAAGAGAGA+AGG | - | chr3_4:46808527-46808546 | None:intergenic | 50.0% | |
AAGAGGGAAGGGAGAAGAGA+GGG | - | chr3_4:46808546-46808565 | None:intergenic | 50.0% | |
AAAGAGGGAAGGGAGAAGAG+AGG | - | chr3_4:46808547-46808566 | None:intergenic | 50.0% | |
GGGTAACGAGAAAAGAGGGA+AGG | - | chr3_4:46808558-46808577 | None:intergenic | 50.0% | |
GAGGGGGTAACGAGAAAAGA+GGG | - | chr3_4:46808562-46808581 | None:intergenic | 50.0% | |
AGAGGGGGTAACGAGAAAAG+AGG | - | chr3_4:46808563-46808582 | None:intergenic | 50.0% | |
GAGAGAAAGGAGAAGAGAGG+GGG | - | chr3_4:46808647-46808666 | None:intergenic | 50.0% | |
AGAAGAGATGGAACACAGGG+AGG | + | chr3_4:46808812-46808831 | Msa0503540:intron | 50.0% | |
!! | GATGGAGGGAGCATCATTGA+TGG | + | chr3_4:46808901-46808920 | Msa0503540:intron | 50.0% |
GCTAAGGGAAACCGGTCTTT+AGG | - | chr3_4:46809963-46809982 | None:intergenic | 50.0% | |
GGACTTTCATCGGAAAGGTG+AGG | - | chr3_4:46809987-46810006 | None:intergenic | 50.0% | |
ACCAAGTCAGAAGCTTGGCA+CGG | - | chr3_4:46810642-46810661 | None:intergenic | 50.0% | |
TAGGGGCTATCTATCCTCGT+AGG | + | chr3_4:46811260-46811279 | Msa0503540:intron | 50.0% | |
ATCCGAGAAGACTTCCTACG+AGG | - | chr3_4:46811277-46811296 | None:intergenic | 50.0% | |
! | CTCCGCGTAGGAAGTCTTTT+TGG | + | chr3_4:46811365-46811384 | Msa0503540:intron | 50.0% |
AGGGAGTCACCACCACAATT+AGG | + | chr3_4:46811445-46811464 | Msa0503540:intron | 50.0% | |
TTGTCCTTTCCCCCACATGT+TGG | + | chr3_4:46811478-46811497 | Msa0503540:intron | 50.0% | |
AGAATGGCACCAACATGTGG+GGG | - | chr3_4:46811490-46811509 | None:intergenic | 50.0% | |
GAGAATGGCACCAACATGTG+GGG | - | chr3_4:46811491-46811510 | None:intergenic | 50.0% | |
GGAGAATGGCACCAACATGT+GGG | - | chr3_4:46811492-46811511 | None:intergenic | 50.0% | |
! | GTTATAATGGGGCGGGAGAA+TGG | - | chr3_4:46811506-46811525 | None:intergenic | 50.0% |
! | CAACCGGGTGCTTTTCTCAT+TGG | + | chr3_4:46811681-46811700 | Msa0503540:intron | 50.0% |
ATGCTTCTCCTAAGTGTGGG+GGG | - | chr3_4:46811940-46811959 | None:intergenic | 50.0% | |
ATAATGATGAACGGCGGGCA+TGG | - | chr3_4:46812259-46812278 | None:intergenic | 50.0% | |
CACCATGAACAAGAAACCGG+TGG | - | chr3_4:46812287-46812306 | None:intergenic | 50.0% | |
CATAACTAATCCGGAGGTGG+TGG | - | chr3_4:46812396-46812415 | None:intergenic | 50.0% | |
GGACATAACTAATCCGGAGG+TGG | - | chr3_4:46812399-46812418 | None:intergenic | 50.0% | |
TCCGGACATAACTAATCCGG+AGG | - | chr3_4:46812402-46812421 | None:intergenic | 50.0% | |
GAGTAGGTTCGTGGGTTCTA+AGG | + | chr3_4:46812480-46812499 | Msa0503540:intron | 50.0% | |
TGTCATGGTGCTCTTCCTCT+TGG | + | chr3_4:46812766-46812785 | Msa0503540:intron | 50.0% | |
! | AGGTGCTAACTTGCACCAAG+AGG | - | chr3_4:46812784-46812803 | None:intergenic | 50.0% |
! | CAAATTTGCTTCCACCACGG+TGG | + | chr3_4:46812887-46812906 | Msa0503540:intron | 50.0% |
!! | TTGAGTTGGTGATGGAGTGG+TGG | + | chr3_4:46812957-46812976 | Msa0503540:intron | 50.0% |
!! | TTGGCATTGGTGAGGATGAG+GGG | - | chr3_4:46813055-46813074 | None:intergenic | 50.0% |
GGCCGGTAAAGGAGATATAG+TGG | - | chr3_4:46813111-46813130 | None:intergenic | 50.0% | |
AGACGTTGTCGGTACTAGAC+CGG | - | chr3_4:46813132-46813151 | None:intergenic | 50.0% | |
!! | GTCTAGTACCGACAACGTCT+AGG | + | chr3_4:46813132-46813151 | Msa0503540:intron | 50.0% |
TAGTGTTCCCAAAAGGGAGC+TGG | + | chr3_4:46813232-46813251 | Msa0503540:intron | 50.0% | |
! | CTACCAACCAGCTCCCTTTT+GGG | - | chr3_4:46813242-46813261 | None:intergenic | 50.0% |
! | ACTACCAACCAGCTCCCTTT+TGG | - | chr3_4:46813243-46813262 | None:intergenic | 50.0% |
!! | GGAGCTGGTTGGTAGTTATC+CGG | + | chr3_4:46813247-46813266 | Msa0503540:intron | 50.0% |
TTGGGACCCTAGCCTAAAAC+CGG | - | chr3_4:46813269-46813288 | None:intergenic | 50.0% | |
CCCCTCGTTTGCAAAACCTA+AGG | + | chr3_4:46813303-46813322 | Msa0503540:intron | 50.0% | |
GGCTTATAGGAAGGCTAGGT+TGG | - | chr3_4:46813495-46813514 | None:intergenic | 50.0% | |
GGGATATCGAGAAGGATGCA+AGG | + | chr3_4:46813561-46813580 | Msa0503540:intron | 50.0% | |
GAGACAACAAGCAATGGGAC+AGG | - | chr3_4:46813609-46813628 | None:intergenic | 50.0% | |
! | TGTGCTTGCTTCTTTGAGGG+AGG | + | chr3_4:46813655-46813674 | Msa0503540:intron | 50.0% |
AAACCAGCAAGCTCTTTCGG+AGG | - | chr3_4:46813682-46813701 | None:intergenic | 50.0% | |
AGACCCACAGAAAGTTGGCA+CGG | - | chr3_4:46814163-46814182 | None:intergenic | 50.0% | |
TGCCAACTTTCTGTGGGTCT+TGG | + | chr3_4:46814163-46814182 | Msa0503540:intron | 50.0% | |
AGCCAAGACCCACAGAAAGT+TGG | - | chr3_4:46814168-46814187 | None:intergenic | 50.0% | |
GACTTTAAACGAGCGCTTCG+TGG | - | chr3_4:46814374-46814393 | None:intergenic | 50.0% | |
GCAATTAGAAGACCCCGTTG+TGG | - | chr3_4:46814749-46814768 | None:intergenic | 50.0% | |
!!! | TGGGCTTTTGGGGTTGGTTT+CGG | + | chr3_4:46814798-46814817 | Msa0503540:intron | 50.0% |
!! | GGGTTGGTTTCGGTTTGACT+CGG | + | chr3_4:46814808-46814827 | Msa0503540:intron | 50.0% |
!! | GGTTGGTTTCGGTTTGACTC+GGG | + | chr3_4:46814809-46814828 | Msa0503540:intron | 50.0% |
GTGGGGAAGAGGTTACTTGT+TGG | + | chr3_4:46814848-46814867 | Msa0503540:intron | 50.0% | |
TGGTTGTTTGCAAAACCGGG+TGG | + | chr3_4:46815057-46815076 | Msa0503540:intron | 50.0% | |
GTCCCGAGCAGGTAAACTAT+GGG | - | chr3_4:46815143-46815162 | None:intergenic | 50.0% | |
AGTCCCGAGCAGGTAAACTA+TGG | - | chr3_4:46815144-46815163 | None:intergenic | 50.0% | |
TGTTGTTAGAAGTCCCGAGC+AGG | - | chr3_4:46815154-46815173 | None:intergenic | 50.0% | |
TTACAACAACTCCCCGGCAA+CGG | + | chr3_4:46815559-46815578 | Msa0503540:intron | 50.0% | |
GCTAAGGGAAACCGGTCTTT+AGG | - | chr3_4:46809963-46809982 | None:intergenic | 50.0% | |
GGACTTTCATCGGAAAGGTG+AGG | - | chr3_4:46809987-46810006 | None:intergenic | 50.0% | |
ACCAAGTCAGAAGCTTGGCA+CGG | - | chr3_4:46810642-46810661 | None:intergenic | 50.0% | |
! | TTCAGCCAGGGTCTGAAGTA+TGG | + | chr3_4:46817043-46817062 | Msa0503540:intron | 50.0% |
GGAAGATGCTTGCGTTCAGA+TGG | - | chr3_4:46817215-46817234 | None:intergenic | 50.0% | |
ACCAACTCCTGAAAGGCCAA+GGG | - | chr3_4:46817288-46817307 | None:intergenic | 50.0% | |
TACCAACTCCTGAAAGGCCA+AGG | - | chr3_4:46817289-46817308 | None:intergenic | 50.0% | |
!! | TTGATTTGGGGTTGTGCCCT+TGG | + | chr3_4:46817469-46817488 | Msa0503540:intron | 50.0% |
GTTCCACTCACATCTCGTGT+TGG | - | chr3_4:46817642-46817661 | None:intergenic | 50.0% | |
GGAAGGGAGTCCTAGTAACA+CGG | - | chr3_4:46817903-46817922 | None:intergenic | 50.0% | |
CCCTTCCCTTGAAAATCGGA+AGG | + | chr3_4:46817916-46817935 | Msa0503540:intron | 50.0% | |
GTGCTGCCTTGCAAATGATG+TGG | + | chr3_4:46818387-46818406 | Msa0503540:CDS | 50.0% | |
ACCGGTAGATATCTCCCAGA+GGG | + | chr3_4:46818736-46818755 | Msa0503540:intron | 50.0% | |
! | ACCCTCTGGGAGATATCTAC+CGG | - | chr3_4:46818740-46818759 | None:intergenic | 50.0% |
!! | CCCAGAGGGTATTCAACCAA+AGG | + | chr3_4:46818750-46818769 | Msa0503540:intron | 50.0% |
TAGGCCCTCGATATCTCCTT+TGG | - | chr3_4:46818769-46818788 | None:intergenic | 50.0% | |
! | GCTACATCAAGCACTGTACC+AGG | + | chr3_4:46819190-46819209 | Msa0503540:CDS | 50.0% |
! | ACATCAAGCACTGTACCAGG+CGG | + | chr3_4:46819193-46819212 | Msa0503540:CDS | 50.0% |
TGAAACAGGCGAACCAGCAT+TGG | + | chr3_4:46819225-46819244 | Msa0503540:CDS | 50.0% | |
GCCAAAGTCACGTGATAAGG+GGG | + | chr3_4:46819591-46819610 | Msa0503540:CDS | 50.0% | |
TCCCCCTTATCACGTGACTT+TGG | - | chr3_4:46819595-46819614 | None:intergenic | 50.0% | |
AAAGTCACGTGATAAGGGGG+AGG | + | chr3_4:46819594-46819613 | Msa0503540:CDS | 50.0% | |
CAGAGGAACAGCACTACACG+TGG | + | chr3_4:46805424-46805443 | Msa0503540:CDS | 55.0% | |
TTTAGTGGGGGAGCGGAAGT+TGG | - | chr3_4:46806605-46806624 | None:intergenic | 55.0% | |
AGGCCCTCAGCCTTCAAAAG+CGG | + | chr3_4:46807202-46807221 | Msa0503540:CDS | 55.0% | |
!! | GCATCCGCTTTTGAAGGCTG+AGG | - | chr3_4:46807209-46807228 | None:intergenic | 55.0% |
CTATCATTCACCGCCGTCGT+CGG | + | chr3_4:46808343-46808362 | Msa0503540:intron | 55.0% | |
GTCGCCGTTGTTCGATTCAC+TGG | + | chr3_4:46808373-46808392 | Msa0503540:intron | 55.0% | |
TGCCGGAAACGGGTCGTATA+TGG | + | chr3_4:46808423-46808442 | Msa0503540:intron | 55.0% | |
GGAAGGGAGAAGAGAGGGAT+GGG | - | chr3_4:46808541-46808560 | None:intergenic | 55.0% | |
AGAGATGGAACACAGGGAGG+TGG | + | chr3_4:46808815-46808834 | Msa0503540:intron | 55.0% | |
AGAGCCAAACCGCAAGTGCA+CGG | + | chr3_4:46809707-46809726 | Msa0503540:intron | 55.0% | |
TTCGATAGGCCGTGCACTTG+CGG | - | chr3_4:46809719-46809738 | None:intergenic | 55.0% | |
TCGGAAAGGTGAGGGGCTAA+GGG | - | chr3_4:46809978-46809997 | None:intergenic | 55.0% | |
ATCGGAAAGGTGAGGGGCTA+AGG | - | chr3_4:46809979-46809998 | None:intergenic | 55.0% | |
! | CGAGAGCGGAGCTTTGATGT+TGG | - | chr3_4:46810152-46810171 | None:intergenic | 55.0% |
ACTGTGGAAGCGAAAGCGGA+GGG | - | chr3_4:46810219-46810238 | None:intergenic | 55.0% | |
AACTGTGGAAGCGAAAGCGG+AGG | - | chr3_4:46810220-46810239 | None:intergenic | 55.0% | |
AGCAGCAAAAGTGGTCCTGG+AGG | + | chr3_4:46810585-46810604 | Msa0503540:intron | 55.0% | |
GCAGCAAAAGTGGTCCTGGA+GGG | + | chr3_4:46810586-46810605 | Msa0503540:intron | 55.0% | |
ACAAGGGGCTGCAGATGCTT+AGG | + | chr3_4:46811241-46811260 | Msa0503540:intron | 55.0% | |
CAAGGGGCTGCAGATGCTTA+GGG | + | chr3_4:46811242-46811261 | Msa0503540:intron | 55.0% | |
AAGGGGCTGCAGATGCTTAG+GGG | + | chr3_4:46811243-46811262 | Msa0503540:intron | 55.0% | |
GGGAGAATGGCACCAACATG+TGG | - | chr3_4:46811493-46811512 | None:intergenic | 55.0% | |
TGCTTCTCCTAAGTGTGGGG+GGG | - | chr3_4:46811939-46811958 | None:intergenic | 55.0% | |
! | GTGGTAGTCCGAGATGGGTT+AGG | + | chr3_4:46812906-46812925 | Msa0503540:intron | 55.0% |
GTTCCCAAAAGGGAGCTGGT+TGG | + | chr3_4:46813236-46813255 | Msa0503540:intron | 55.0% | |
! | TTTGAAGCCCCCTGACCAGA+AGG | - | chr3_4:46814248-46814267 | None:intergenic | 55.0% |
TTAAACGAGCGCTTCGTGGG+AGG | - | chr3_4:46814370-46814389 | None:intergenic | 55.0% | |
!! | TGGTTTCGGTTTGACTCGGG+AGG | + | chr3_4:46814812-46814831 | Msa0503540:intron | 55.0% |
AGGTGGTGAAAGGGGGGAAA+AGG | + | chr3_4:46815227-46815246 | Msa0503540:intron | 55.0% | |
!!! | AAGTTTTTGGCGCCGTTGCC+GGG | - | chr3_4:46815574-46815593 | None:intergenic | 55.0% |
!!! | CAAGTTTTTGGCGCCGTTGC+CGG | - | chr3_4:46815575-46815594 | None:intergenic | 55.0% |
AGAGCCAAACCGCAAGTGCA+CGG | + | chr3_4:46809707-46809726 | Msa0503540:intron | 55.0% | |
TTCGATAGGCCGTGCACTTG+CGG | - | chr3_4:46809719-46809738 | None:intergenic | 55.0% | |
TCGGAAAGGTGAGGGGCTAA+GGG | - | chr3_4:46809978-46809997 | None:intergenic | 55.0% | |
ATCGGAAAGGTGAGGGGCTA+AGG | - | chr3_4:46809979-46809998 | None:intergenic | 55.0% | |
! | CGAGAGCGGAGCTTTGATGT+TGG | - | chr3_4:46810152-46810171 | None:intergenic | 55.0% |
ACTGTGGAAGCGAAAGCGGA+GGG | - | chr3_4:46810219-46810238 | None:intergenic | 55.0% | |
AACTGTGGAAGCGAAAGCGG+AGG | - | chr3_4:46810220-46810239 | None:intergenic | 55.0% | |
AGCAGCAAAAGTGGTCCTGG+AGG | + | chr3_4:46810585-46810604 | Msa0503540:intron | 55.0% | |
GCAGCAAAAGTGGTCCTGGA+GGG | + | chr3_4:46810586-46810605 | Msa0503540:intron | 55.0% | |
! | ACCCTTGGCCTTTCAGGAGT+TGG | + | chr3_4:46817284-46817303 | Msa0503540:CDS | 55.0% |
CACCGGTAGATATCTCCCAG+AGG | + | chr3_4:46818735-46818754 | Msa0503540:intron | 55.0% | |
GTAGTAGCAGCACTCCTTGC+CGG | + | chr3_4:46819157-46819176 | Msa0503540:CDS | 55.0% | |
TAGCGAAGGAAACACCGGCA+AGG | - | chr3_4:46819174-46819193 | None:intergenic | 55.0% | |
GTTTCACTTCTGTTGCCGCC+TGG | - | chr3_4:46819211-46819230 | None:intergenic | 55.0% | |
GGCGGCAACAGAAGTGAAAC+AGG | + | chr3_4:46819211-46819230 | Msa0503540:CDS | 55.0% | |
! | ACAGGCGAACCAGCATTGGA+AGG | + | chr3_4:46819229-46819248 | Msa0503540:CDS | 55.0% |
! | GCGAACCAGCATTGGAAGGA+AGG | + | chr3_4:46819233-46819252 | Msa0503540:CDS | 55.0% |
ACGCAGGCACACGTATGAGG+GGG | - | chr3_4:46804961-46804980 | None:intergenic | 60.0% | |
CACGCAGGCACACGTATGAG+GGG | - | chr3_4:46804962-46804981 | None:intergenic | 60.0% | |
GCACGCAGGCACACGTATGA+GGG | - | chr3_4:46804963-46804982 | None:intergenic | 60.0% | |
CGCACGCGCACATACAAGTG+AGG | - | chr3_4:46806390-46806409 | None:intergenic | 60.0% | |
! | GGTTCGGTTTAGTGGGGGAG+CGG | - | chr3_4:46806612-46806631 | None:intergenic | 60.0% |
CGACGACGGCGGTGAATGAT+AGG | - | chr3_4:46808345-46808364 | None:intergenic | 60.0% | |
GAATCGAACAACGGCGACGG+CGG | - | chr3_4:46808371-46808390 | None:intergenic | 60.0% | |
GGGAAGGGAGAAGAGAGGGA+TGG | - | chr3_4:46808542-46808561 | None:intergenic | 60.0% | |
GATGGAACACAGGGAGGTGG+TGG | + | chr3_4:46808818-46808837 | Msa0503540:intron | 60.0% | |
! | ACACAGGGAGGTGGTGGTGT+TGG | + | chr3_4:46808824-46808843 | Msa0503540:intron | 60.0% |
TAGGCCGTGCACTTGCGGTT+TGG | - | chr3_4:46809714-46809733 | None:intergenic | 60.0% | |
GGTGAGGGGCTAAGGGAAAC+CGG | - | chr3_4:46809971-46809990 | None:intergenic | 60.0% | |
GCAAAAGTGGTCCTGGAGGG+TGG | + | chr3_4:46810589-46810608 | Msa0503540:intron | 60.0% | |
GCCGTGCCAAGCTTCTGACT+TGG | + | chr3_4:46810638-46810657 | Msa0503540:intron | 60.0% | |
GGCACCAACATGTGGGGGAA+AGG | - | chr3_4:46811485-46811504 | None:intergenic | 60.0% | |
TTCTCCTAAGTGTGGGGGGG+GGG | - | chr3_4:46811936-46811955 | None:intergenic | 60.0% | |
CTTCTCCTAAGTGTGGGGGG+GGG | - | chr3_4:46811937-46811956 | None:intergenic | 60.0% | |
GCTTCTCCTAAGTGTGGGGG+GGG | - | chr3_4:46811938-46811957 | None:intergenic | 60.0% | |
ATCTCGGACTACCACCGTGG+TGG | - | chr3_4:46812901-46812920 | None:intergenic | 60.0% | |
ACCACGGTGGTAGTCCGAGA+TGG | + | chr3_4:46812900-46812919 | Msa0503540:intron | 60.0% | |
CCACGGTGGTAGTCCGAGAT+GGG | + | chr3_4:46812901-46812920 | Msa0503540:intron | 60.0% | |
!! | TGGTGATGGAGTGGTGGACG+AGG | + | chr3_4:46812963-46812982 | Msa0503540:intron | 60.0% |
GGTACTAGACCGGCCGGTAA+AGG | - | chr3_4:46813122-46813141 | None:intergenic | 60.0% | |
GTTGTCGGTACTAGACCGGC+CGG | - | chr3_4:46813128-46813147 | None:intergenic | 60.0% | |
GGACCTCCGAAAGAGCTTGC+TGG | + | chr3_4:46813676-46813695 | Msa0503540:intron | 60.0% | |
AGAAGGCTAGAGGTCGGGCA+CGG | + | chr3_4:46814116-46814135 | Msa0503540:intron | 60.0% | |
GGGCCGTGCCAACTTTCTGT+GGG | + | chr3_4:46814157-46814176 | Msa0503540:intron | 60.0% | |
CCCTGACCAGAAGGTTGGCA+CGG | - | chr3_4:46814239-46814258 | None:intergenic | 60.0% | |
CCGTGCCAACCTTCTGGTCA+GGG | + | chr3_4:46814236-46814255 | Msa0503540:intron | 60.0% | |
CGTGCCAACCTTCTGGTCAG+GGG | + | chr3_4:46814237-46814256 | Msa0503540:intron | 60.0% | |
GTGCCAACCTTCTGGTCAGG+GGG | + | chr3_4:46814238-46814257 | Msa0503540:intron | 60.0% | |
AAGCCCCCTGACCAGAAGGT+TGG | - | chr3_4:46814244-46814263 | None:intergenic | 60.0% | |
!! | GGTTTGACTCGGGAGGACTC+CGG | + | chr3_4:46814819-46814838 | Msa0503540:intron | 60.0% |
ACCTCTTCCCCACAACCCTC+CGG | - | chr3_4:46814841-46814860 | None:intergenic | 60.0% | |
!!! | AGTTTTTGGCGCCGTTGCCG+GGG | - | chr3_4:46815573-46815592 | None:intergenic | 60.0% |
TAGGCCGTGCACTTGCGGTT+TGG | - | chr3_4:46809714-46809733 | None:intergenic | 60.0% | |
GGTGAGGGGCTAAGGGAAAC+CGG | - | chr3_4:46809971-46809990 | None:intergenic | 60.0% | |
GCAAAAGTGGTCCTGGAGGG+TGG | + | chr3_4:46810589-46810608 | Msa0503540:intron | 60.0% | |
GCCGTGCCAAGCTTCTGACT+TGG | + | chr3_4:46810638-46810657 | Msa0503540:intron | 60.0% | |
GCAGGCCTTCCTTCCAATGC+TGG | - | chr3_4:46819241-46819260 | None:intergenic | 60.0% | |
CGCACGCAGGCACACGTATG+AGG | - | chr3_4:46804964-46804983 | None:intergenic | 65.0% | |
AGTGGTCCTGGAGGGTGGCA+CGG | + | chr3_4:46810594-46810613 | Msa0503540:intron | 65.0% | |
GGCCGTGCCACATGTTGGCA+CGG | + | chr3_4:46810615-46810634 | Msa0503540:intron | 65.0% | |
GCCGTGCCACATGTTGGCAC+GGG | + | chr3_4:46810616-46810635 | Msa0503540:intron | 65.0% | |
GCCCGTGCCAACATGTGGCA+CGG | - | chr3_4:46810620-46810639 | None:intergenic | 65.0% | |
CCCATCTCGGACTACCACCG+TGG | - | chr3_4:46812904-46812923 | None:intergenic | 65.0% | |
CGGGCCGTGCCAACTTTCTG+TGG | + | chr3_4:46814156-46814175 | Msa0503540:intron | 65.0% | |
CGGCCGTGCCAACCTTAGCA+CGG | + | chr3_4:46814212-46814231 | Msa0503540:intron | 65.0% | |
GGCCGTGCCAACCTTAGCAC+GGG | + | chr3_4:46814213-46814232 | Msa0503540:intron | 65.0% | |
GGCCCGTGCTAAGGTTGGCA+CGG | - | chr3_4:46814218-46814237 | None:intergenic | 65.0% | |
GCCGTGCCAACCTTCTGGTC+AGG | + | chr3_4:46814235-46814254 | Msa0503540:intron | 65.0% | |
!! | TTGACTCGGGAGGACTCCGG+AGG | + | chr3_4:46814822-46814841 | Msa0503540:intron | 65.0% |
! | TGACTCGGGAGGACTCCGGA+GGG | + | chr3_4:46814823-46814842 | Msa0503540:intron | 65.0% |
GGAGGACTCCGGAGGGTTGT+GGG | + | chr3_4:46814830-46814849 | Msa0503540:intron | 65.0% | |
GAGGACTCCGGAGGGTTGTG+GGG | + | chr3_4:46814831-46814850 | Msa0503540:intron | 65.0% | |
TCCGGAGGGTTGTGGGGAAG+AGG | + | chr3_4:46814837-46814856 | Msa0503540:intron | 65.0% | |
AGTGGTCCTGGAGGGTGGCA+CGG | + | chr3_4:46810594-46810613 | Msa0503540:intron | 65.0% | |
GGCCGTGCCACATGTTGGCA+CGG | + | chr3_4:46810615-46810634 | Msa0503540:intron | 65.0% | |
GCCGTGCCACATGTTGGCAC+GGG | + | chr3_4:46810616-46810635 | Msa0503540:intron | 65.0% | |
GCCCGTGCCAACATGTGGCA+CGG | - | chr3_4:46810620-46810639 | None:intergenic | 65.0% | |
GGCACGGCCGTGCCACATGT+TGG | + | chr3_4:46810610-46810629 | Msa0503540:intron | 70.0% | |
GCACGGCCCGTGCCAACATG+TGG | - | chr3_4:46810625-46810644 | None:intergenic | 70.0% | |
TAGGCCCCCCCCCCACACTT+AGG | + | chr3_4:46811929-46811948 | Msa0503540:intron | 70.0% | |
GTTGGCACGGCCCGTGCCAA+GGG | - | chr3_4:46814150-46814169 | None:intergenic | 70.0% | |
AGTTGGCACGGCCCGTGCCA+AGG | - | chr3_4:46814151-46814170 | None:intergenic | 70.0% | |
GGCACGGCCCGTGCTAAGGT+TGG | - | chr3_4:46814223-46814242 | None:intergenic | 70.0% | |
GGTTGGCACGGCCCGTGCTA+AGG | - | chr3_4:46814227-46814246 | None:intergenic | 70.0% | |
CACGGGCCGTGCCAACCTTC+TGG | + | chr3_4:46814230-46814249 | Msa0503540:intron | 70.0% | |
GGGAGGACTCCGGAGGGTTG+TGG | + | chr3_4:46814829-46814848 | Msa0503540:intron | 70.0% | |
GGCACGGCCGTGCCACATGT+TGG | + | chr3_4:46810610-46810629 | Msa0503540:intron | 70.0% | |
GCACGGCCCGTGCCAACATG+TGG | - | chr3_4:46810625-46810644 | None:intergenic | 70.0% | |
GACGGCGGTTCCGACGACGG+CGG | - | chr3_4:46808356-46808375 | None:intergenic | 75.0% | |
GGCGACGGCGGTTCCGACGA+CGG | - | chr3_4:46808359-46808378 | None:intergenic | 75.0% | |
CGGCCGTGCCACCCTTGGCA+CGG | + | chr3_4:46814136-46814155 | Msa0503540:intron | 75.0% | |
GGCCGTGCCACCCTTGGCAC+GGG | + | chr3_4:46814137-46814156 | Msa0503540:intron | 75.0% | |
GGCCCGTGCCAAGGGTGGCA+CGG | - | chr3_4:46814142-46814161 | None:intergenic | 75.0% | |
! | GCACGGCCGTGCCACCCTCC+AGG | - | chr3_4:46810603-46810622 | None:intergenic | 80.0% |
! | GGGCACGGCCGTGCCACCCT+TGG | + | chr3_4:46814131-46814150 | Msa0503540:intron | 80.0% |
! | GGCACGGCCCGTGCCAAGGG+TGG | - | chr3_4:46814147-46814166 | None:intergenic | 80.0% |
! | GCACGGCCGTGCCACCCTCC+AGG | - | chr3_4:46810603-46810622 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 46804340 | 46819821 | 46804340 | ID=Msa0503540;Name=Msa0503540 |
chr3_4 | mRNA | 46804340 | 46819821 | 46804340 | ID=Msa0503540-mRNA-1;Parent=Msa0503540;Name=Msa0503540-mRNA-1;_AED=0.02;_eAED=0.02;_QI=147|1|1|1|0.85|0.87|8|197|762 |
chr3_4 | exon | 46804340 | 46804544 | 46804340 | ID=Msa0503540-mRNA-1:exon:9995;Parent=Msa0503540-mRNA-1 |
chr3_4 | exon | 46805318 | 46805833 | 46805318 | ID=Msa0503540-mRNA-1:exon:9996;Parent=Msa0503540-mRNA-1 |
chr3_4 | exon | 46807113 | 46807262 | 46807113 | ID=Msa0503540-mRNA-1:exon:9997;Parent=Msa0503540-mRNA-1 |
chr3_4 | exon | 46816780 | 46816986 | 46816780 | ID=Msa0503540-mRNA-1:exon:9998;Parent=Msa0503540-mRNA-1 |
chr3_4 | exon | 46817147 | 46817305 | 46817147 | ID=Msa0503540-mRNA-1:exon:9999;Parent=Msa0503540-mRNA-1 |
chr3_4 | exon | 46817532 | 46817693 | 46817532 | ID=Msa0503540-mRNA-1:exon:10000;Parent=Msa0503540-mRNA-1 |
chr3_4 | exon | 46818003 | 46818427 | 46818003 | ID=Msa0503540-mRNA-1:exon:10001;Parent=Msa0503540-mRNA-1 |
chr3_4 | exon | 46819013 | 46819821 | 46819013 | ID=Msa0503540-mRNA-1:exon:10002;Parent=Msa0503540-mRNA-1 |
chr3_4 | five_prime_UTR | 46804340 | 46804486 | 46804340 | ID=Msa0503540-mRNA-1:five_prime_utr;Parent=Msa0503540-mRNA-1 |
chr3_4 | CDS | 46804487 | 46804544 | 46804487 | ID=Msa0503540-mRNA-1:cds;Parent=Msa0503540-mRNA-1 |
chr3_4 | CDS | 46805318 | 46805833 | 46805318 | ID=Msa0503540-mRNA-1:cds;Parent=Msa0503540-mRNA-1 |
chr3_4 | CDS | 46807113 | 46807262 | 46807113 | ID=Msa0503540-mRNA-1:cds;Parent=Msa0503540-mRNA-1 |
chr3_4 | CDS | 46816780 | 46816986 | 46816780 | ID=Msa0503540-mRNA-1:cds;Parent=Msa0503540-mRNA-1 |
chr3_4 | CDS | 46817147 | 46817305 | 46817147 | ID=Msa0503540-mRNA-1:cds;Parent=Msa0503540-mRNA-1 |
chr3_4 | CDS | 46817532 | 46817693 | 46817532 | ID=Msa0503540-mRNA-1:cds;Parent=Msa0503540-mRNA-1 |
chr3_4 | CDS | 46818003 | 46818427 | 46818003 | ID=Msa0503540-mRNA-1:cds;Parent=Msa0503540-mRNA-1 |
chr3_4 | CDS | 46819013 | 46819624 | 46819013 | ID=Msa0503540-mRNA-1:cds;Parent=Msa0503540-mRNA-1 |
chr3_4 | three_prime_UTR | 46819625 | 46819821 | 46819625 | ID=Msa0503540-mRNA-1:three_prime_utr;Parent=Msa0503540-mRNA-1 |
Gene Sequence |
Protein sequence |