Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057240 | XP_039687598.1 | 95.385 | 325 | 15 | 0 | 1 | 325 | 1 | 325 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057240 | sp|Q08298|RD22_ARATH | 44.103 | 390 | 141 | 11 | 5 | 323 | 7 | 390 | 1.45e-98 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057240 | G7I3D0 | 95.385 | 325 | 15 | 0 | 1 | 325 | 1 | 325 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005050 | Msa0057240 | 0.815780 | 7.756749e-52 | -8.615850e-47 |
| Msa0011720 | Msa0057240 | 0.859021 | 5.515344e-63 | -8.615850e-47 |
| Msa0012440 | Msa0057240 | 0.989837 | 7.206344e-180 | -8.615850e-47 |
| Msa0023170 | Msa0057240 | 0.805647 | 1.206422e-49 | -8.615850e-47 |
| Msa0024680 | Msa0057240 | 0.801690 | 7.992670e-49 | -8.615850e-47 |
| Msa0032370 | Msa0057240 | 0.817135 | 3.857840e-52 | -8.615850e-47 |
| Msa0036430 | Msa0057240 | 0.846825 | 1.702740e-59 | -8.615850e-47 |
| Msa0044020 | Msa0057240 | 0.824296 | 8.714386e-54 | -8.615850e-47 |
| Msa0050040 | Msa0057240 | 0.804329 | 2.276176e-49 | -8.615850e-47 |
| Msa0050430 | Msa0057240 | 0.815365 | 9.598300e-52 | -8.615850e-47 |
| Msa0050730 | Msa0057240 | 0.809771 | 1.604908e-50 | -8.615850e-47 |
| Msa0050760 | Msa0057240 | 0.815464 | 9.124322e-52 | -8.615850e-47 |
| Msa0053110 | Msa0057240 | 0.833355 | 5.593770e-56 | -8.615850e-47 |
| Msa0057240 | Msa0060600 | 0.823550 | 1.304217e-53 | -8.615850e-47 |
| Msa0057240 | Msa0074230 | 0.808045 | 3.756683e-50 | -8.615850e-47 |
| Msa0057240 | Msa0084500 | 0.828836 | 7.203493e-55 | -8.615850e-47 |
| Msa0057240 | Msa0091770 | 0.807403 | 5.140850e-50 | -8.615850e-47 |
| Msa0057240 | Msa0094100 | 0.831646 | 1.483344e-55 | -8.615850e-47 |
| Msa0057240 | Msa0094420 | 0.803524 | 3.345319e-49 | -8.615850e-47 |
| Msa0057240 | Msa0095380 | 0.804208 | 2.411904e-49 | -8.615850e-47 |
| Msa0057240 | Msa0098440 | 0.822649 | 2.115974e-53 | -8.615850e-47 |
| Msa0057240 | Msa0102990 | 0.805215 | 1.486528e-49 | -8.615850e-47 |
| Msa0057240 | Msa0103000 | 0.811532 | 6.677795e-51 | -8.615850e-47 |
| Msa0057240 | Msa0105340 | 0.835835 | 1.331197e-56 | -8.615850e-47 |
| Msa0057240 | Msa0105420 | 0.819668 | 1.029343e-52 | -8.615850e-47 |
| Msa0057240 | Msa0109950 | 0.811826 | 5.765720e-51 | -8.615850e-47 |
| Msa0057240 | Msa0113160 | 0.807025 | 6.183279e-50 | -8.615850e-47 |
| Msa0057240 | Msa0114540 | -0.802989 | 4.317082e-49 | -8.615850e-47 |
| Msa0057240 | Msa0120330 | 0.825548 | 4.414297e-54 | -8.615850e-47 |
| Msa0057240 | Msa0124340 | 0.818243 | 2.169617e-52 | -8.615850e-47 |
| Msa0057240 | Msa0130010 | 0.810454 | 1.143758e-50 | -8.615850e-47 |
| Msa0057240 | Msa0130570 | 0.846175 | 2.561824e-59 | -8.615850e-47 |
| Msa0057240 | Msa0134130 | 0.831085 | 2.038699e-55 | -8.615850e-47 |
| Msa0057240 | Msa0140910 | 0.812002 | 5.278436e-51 | -8.615850e-47 |
| Msa0057240 | Msa0141670 | 0.819282 | 1.260796e-52 | -8.615850e-47 |
| Msa0057240 | Msa0143380 | 0.805077 | 1.589098e-49 | -8.615850e-47 |
| Msa0057240 | Msa0148340 | 0.817400 | 3.362745e-52 | -8.615850e-47 |
| Msa0057240 | Msa0149560 | 0.995432 | 3.325673e-216 | -8.615850e-47 |
| Msa0057240 | Msa0149620 | 0.814581 | 1.432214e-51 | -8.615850e-47 |
| Msa0057240 | Msa0151690 | 0.838203 | 3.305379e-57 | -8.615850e-47 |
| Msa0057240 | Msa0153420 | 0.814691 | 1.354197e-51 | -8.615850e-47 |
| Msa0057240 | Msa0161100 | 0.811018 | 8.635633e-51 | -8.615850e-47 |
| Msa0057240 | Msa0161200 | 0.813611 | 2.344599e-51 | -8.615850e-47 |
| Msa0057240 | Msa0161210 | 0.808342 | 3.246686e-50 | -8.615850e-47 |
| Msa0057240 | Msa0162050 | 0.801927 | 7.146821e-49 | -8.615850e-47 |
| Msa0057240 | Msa0168100 | 0.813983 | 1.941250e-51 | -8.615850e-47 |
| Msa0057240 | Msa0172350 | 0.822902 | 1.847426e-53 | -8.615850e-47 |
| Msa0057240 | Msa0174560 | 0.804425 | 2.173259e-49 | -8.615850e-47 |
| Msa0057240 | Msa0176470 | 0.828738 | 7.607081e-55 | -8.615850e-47 |
| Msa0057240 | Msa0184020 | 0.806251 | 9.007276e-50 | -8.615850e-47 |
| Msa0057240 | Msa0184990 | 0.809063 | 2.276401e-50 | -8.615850e-47 |
| Msa0057240 | Msa0185590 | 0.808548 | 2.934063e-50 | -8.615850e-47 |
| Msa0057240 | Msa0191040 | 0.813476 | 2.510753e-51 | -8.615850e-47 |
| Msa0057240 | Msa0191190 | 0.816409 | 5.614376e-52 | -8.615850e-47 |
| Msa0057240 | Msa0200030 | 0.803072 | 4.151053e-49 | -8.615850e-47 |
| Msa0057240 | Msa0203030 | 0.855444 | 6.282598e-62 | -8.615850e-47 |
| Msa0057240 | Msa0203160 | 0.846114 | 2.662149e-59 | -8.615850e-47 |
| Msa0057240 | Msa0205850 | 0.811011 | 8.665395e-51 | -8.615850e-47 |
| Msa0057240 | Msa0206800 | 0.824539 | 7.642993e-54 | -8.615850e-47 |
| Msa0057240 | Msa0207000 | 0.804807 | 1.809242e-49 | -8.615850e-47 |
| Msa0057240 | Msa0207180 | 0.813976 | 1.948179e-51 | -8.615850e-47 |
| Msa0057240 | Msa0208520 | 0.816129 | 6.482634e-52 | -8.615850e-47 |
| Msa0057240 | Msa0208630 | 0.808418 | 3.127397e-50 | -8.615850e-47 |
| Msa0057240 | Msa0219190 | 0.886902 | 2.281449e-72 | -8.615850e-47 |
| Msa0057240 | Msa0220300 | 0.803562 | 3.285556e-49 | -8.615850e-47 |
| Msa0057240 | Msa0227510 | 0.835514 | 1.605617e-56 | -8.615850e-47 |
| Msa0057240 | Msa0233340 | 0.814030 | 1.896167e-51 | -8.615850e-47 |
| Msa0057240 | Msa0235890 | 0.843525 | 1.328111e-58 | -8.615850e-47 |
| Msa0057240 | Msa0236110 | 0.807872 | 4.088704e-50 | -8.615850e-47 |
| Msa0057240 | Msa0236440 | 0.810954 | 8.917198e-51 | -8.615850e-47 |
| Msa0057240 | Msa0257310 | 0.805951 | 1.041615e-49 | -8.615850e-47 |
| Msa0057240 | Msa0257680 | 0.825482 | 4.575227e-54 | -8.615850e-47 |
| Msa0057240 | Msa0265820 | 0.825677 | 4.114102e-54 | -8.615850e-47 |
| Msa0057240 | Msa0267760 | 0.820638 | 6.170722e-53 | -8.615850e-47 |
| Msa0057240 | Msa0273990 | 0.805172 | 1.517539e-49 | -8.615850e-47 |
| Msa0057240 | Msa0280490 | 0.806412 | 8.331382e-50 | -8.615850e-47 |
| Msa0057240 | Msa0288190 | 0.819377 | 1.199212e-52 | -8.615850e-47 |
| Msa0057240 | Msa0288200 | 0.834634 | 2.675446e-56 | -8.615850e-47 |
| Msa0057240 | Msa0292180 | 0.801452 | 8.943229e-49 | -8.615850e-47 |
| Msa0057240 | Msa0298240 | 0.869715 | 2.516034e-66 | -8.615850e-47 |
| Msa0057240 | Msa0307830 | -0.801877 | 7.317156e-49 | -8.615850e-47 |
| Msa0057240 | Msa0308830 | 0.801314 | 9.544442e-49 | -8.615850e-47 |
| Msa0057240 | Msa0311690 | 0.810949 | 8.938789e-51 | -8.615850e-47 |
| Msa0057240 | Msa0311920 | 0.806305 | 8.773758e-50 | -8.615850e-47 |
| Msa0057240 | Msa0314630 | 0.811283 | 7.564468e-51 | -8.615850e-47 |
| Msa0057240 | Msa0315240 | 0.830777 | 2.425947e-55 | -8.615850e-47 |
| Msa0057240 | Msa0315480 | 0.818398 | 2.001290e-52 | -8.615850e-47 |
| Msa0057240 | Msa0316850 | 0.828613 | 8.155470e-55 | -8.615850e-47 |
| Msa0057240 | Msa0322830 | 0.814876 | 1.232054e-51 | -8.615850e-47 |
| Msa0057240 | Msa0322840 | 0.819043 | 1.428785e-52 | -8.615850e-47 |
| Msa0057240 | Msa0322860 | 0.801313 | 9.549542e-49 | -8.615850e-47 |
| Msa0057240 | Msa0323610 | 0.820462 | 6.772645e-53 | -8.615850e-47 |
| Msa0057240 | Msa0326540 | 0.839782 | 1.289810e-57 | -8.615850e-47 |
| Msa0057240 | Msa0331780 | 0.801009 | 1.102242e-48 | -8.615850e-47 |
| Msa0057240 | Msa0335040 | 0.808876 | 2.496371e-50 | -8.615850e-47 |
| Msa0057240 | Msa0335270 | 0.811107 | 8.259545e-51 | -8.615850e-47 |
| Msa0057240 | Msa0366010 | 0.811726 | 6.060210e-51 | -8.615850e-47 |
| Msa0057240 | Msa0368660 | 0.808987 | 2.363557e-50 | -8.615850e-47 |
| Msa0057240 | Msa0369570 | 0.833062 | 6.616419e-56 | -8.615850e-47 |
| Msa0057240 | Msa0371540 | 0.849760 | 2.629392e-60 | -8.615850e-47 |
| Msa0057240 | Msa0371560 | 0.836304 | 1.012137e-56 | -8.615850e-47 |
| Msa0057240 | Msa0371610 | 0.804332 | 2.272422e-49 | -8.615850e-47 |
| Msa0057240 | Msa0371810 | 0.805026 | 1.628018e-49 | -8.615850e-47 |
| Msa0057240 | Msa0372660 | 0.803003 | 4.289408e-49 | -8.615850e-47 |
| Msa0057240 | Msa0380920 | 0.825294 | 5.070295e-54 | -8.615850e-47 |
| Msa0057240 | Msa0382560 | 0.809520 | 1.817195e-50 | -8.615850e-47 |
| Msa0057240 | Msa0393950 | 0.807579 | 4.717490e-50 | -8.615850e-47 |
| Msa0057240 | Msa0405770 | 0.824909 | 6.252162e-54 | -8.615850e-47 |
| Msa0057240 | Msa0407890 | 0.815339 | 9.726400e-52 | -8.615850e-47 |
| Msa0057240 | Msa0408630 | 0.820915 | 5.328949e-53 | -8.615850e-47 |
| Msa0057240 | Msa0413710 | 0.812373 | 4.380855e-51 | -8.615850e-47 |
| Msa0057240 | Msa0413930 | 0.886897 | 2.292184e-72 | -8.615850e-47 |
| Msa0057240 | Msa0415810 | 0.808503 | 2.999849e-50 | -8.615850e-47 |
| Msa0057240 | Msa0419820 | 0.809461 | 1.870570e-50 | -8.615850e-47 |
| Msa0057240 | Msa0419970 | 0.835802 | 1.357133e-56 | -8.615850e-47 |
| Msa0057240 | Msa0420540 | 0.830009 | 3.737264e-55 | -8.615850e-47 |
| Msa0057240 | Msa0423360 | -0.812502 | 4.104386e-51 | -8.615850e-47 |
| Msa0057240 | Msa0426330 | 0.848455 | 6.062431e-60 | -8.615850e-47 |
| Msa0057240 | Msa0430820 | 0.839995 | 1.135094e-57 | -8.615850e-47 |
| Msa0057240 | Msa0436460 | 0.840195 | 1.006533e-57 | -8.615850e-47 |
| Msa0057240 | Msa0436500 | 0.844681 | 6.504725e-59 | -8.615850e-47 |
| Msa0057240 | Msa0437710 | 0.814113 | 1.817720e-51 | -8.615850e-47 |
| Msa0057240 | Msa0442880 | 0.820787 | 5.704167e-53 | -8.615850e-47 |
| Msa0057240 | Msa0444010 | 0.841134 | 5.713725e-58 | -8.615850e-47 |
| Msa0057240 | Msa0453520 | 0.824871 | 6.382581e-54 | -8.615850e-47 |
| Msa0057240 | Msa0458950 | 0.863321 | 2.705105e-64 | -8.615850e-47 |
| Msa0057240 | Msa0464540 | 0.815656 | 8.265143e-52 | -8.615850e-47 |
| Msa0057240 | Msa0466060 | 0.845848 | 3.143691e-59 | -8.615850e-47 |
| Msa0057240 | Msa0466280 | 0.808191 | 3.496697e-50 | -8.615850e-47 |
| Msa0057240 | Msa0480320 | 0.817703 | 2.873383e-52 | -8.615850e-47 |
| Msa0057240 | Msa0484690 | 0.855658 | 5.442545e-62 | -8.615850e-47 |
| Msa0057240 | Msa0484780 | 0.811882 | 5.604823e-51 | -8.615850e-47 |
| Msa0057240 | Msa0490300 | 0.807175 | 5.748210e-50 | -8.615850e-47 |
| Msa0057240 | Msa0490350 | 0.818518 | 1.880080e-52 | -8.615850e-47 |
| Msa0057240 | Msa0503540 | 0.805675 | 1.190570e-49 | -8.615850e-47 |
| Msa0057240 | Msa0505360 | 0.804719 | 1.887648e-49 | -8.615850e-47 |
| Msa0057240 | Msa0506890 | 0.801253 | 9.822885e-49 | -8.615850e-47 |
| Msa0057240 | Msa0508200 | 0.814570 | 1.440285e-51 | -8.615850e-47 |
| Msa0057240 | Msa0509970 | 0.815521 | 8.859952e-52 | -8.615850e-47 |
| Msa0057240 | Msa0517340 | 0.854207 | 1.435483e-61 | -8.615850e-47 |
| Msa0057240 | Msa0520510 | 0.808263 | 3.374890e-50 | -8.615850e-47 |
| Msa0057240 | Msa0521880 | 0.825482 | 4.576042e-54 | -8.615850e-47 |
| Msa0057240 | Msa0525240 | 0.828643 | 8.020746e-55 | -8.615850e-47 |
| Msa0057240 | Msa0526710 | 0.819470 | 1.142020e-52 | -8.615850e-47 |
| Msa0057240 | Msa0526890 | 0.807018 | 6.202549e-50 | -8.615850e-47 |
| Msa0057240 | Msa0527590 | 0.817338 | 3.473653e-52 | -8.615850e-47 |
| Msa0057240 | Msa0534590 | 0.810425 | 1.160156e-50 | -8.615850e-47 |
| Msa0057240 | Msa0535030 | 0.818765 | 1.652494e-52 | -8.615850e-47 |
| Msa0057240 | Msa0535060 | 0.819434 | 1.163707e-52 | -8.615850e-47 |
| Msa0057240 | Msa0546380 | 0.808993 | 2.356896e-50 | -8.615850e-47 |
| Msa0057240 | Msa0557630 | 0.836872 | 7.253289e-57 | -8.615850e-47 |
| Msa0057240 | Msa0571080 | 0.820628 | 6.203137e-53 | -8.615850e-47 |
| Msa0057240 | Msa0590800 | 0.805411 | 1.352104e-49 | -8.615850e-47 |
| Msa0057240 | Msa0607500 | 0.824117 | 9.603115e-54 | -8.615850e-47 |
| Msa0057240 | Msa0619980 | 0.881134 | 3.088010e-70 | -8.615850e-47 |
| Msa0057240 | Msa0620260 | 0.829369 | 5.351271e-55 | -8.615850e-47 |
| Msa0057240 | Msa0620810 | 0.819036 | 1.434292e-52 | -8.615850e-47 |
| Msa0057240 | Msa0621890 | 0.814275 | 1.673479e-51 | -8.615850e-47 |
| Msa0057240 | Msa0625890 | 0.801268 | 9.753321e-49 | -8.615850e-47 |
| Msa0057240 | Msa0626230 | 0.813065 | 3.090480e-51 | -8.615850e-47 |
| Msa0057240 | Msa0631120 | 0.824823 | 6.548898e-54 | -8.615850e-47 |
| Msa0057240 | Msa0638280 | 0.818585 | 1.815141e-52 | -8.615850e-47 |
| Msa0057240 | Msa0638320 | 0.814422 | 1.553297e-51 | -8.615850e-47 |
| Msa0057240 | Msa0645050 | 0.812635 | 3.839476e-51 | -8.615850e-47 |
| Msa0057240 | Msa0649970 | 0.804493 | 2.104022e-49 | -8.615850e-47 |
| Msa0057240 | Msa0652980 | 0.851368 | 9.287693e-61 | -8.615850e-47 |
| Msa0057240 | Msa0663090 | 0.848101 | 7.597446e-60 | -8.615850e-47 |
| Msa0057240 | Msa0663680 | 0.807046 | 6.119529e-50 | -8.615850e-47 |
| Msa0057240 | Msa0666030 | 0.804801 | 1.814596e-49 | -8.615850e-47 |
| Msa0057240 | Msa0677270 | 0.810867 | 9.310760e-51 | -8.615850e-47 |
| Msa0057240 | Msa0690560 | 0.823124 | 1.639879e-53 | -8.615850e-47 |
| Msa0057240 | Msa0691160 | 0.821739 | 3.439154e-53 | -8.615850e-47 |
| Msa0057240 | Msa0694250 | 0.806816 | 6.845904e-50 | -8.615850e-47 |
| Msa0057240 | Msa0695370 | 0.805843 | 1.097420e-49 | -8.615850e-47 |
| Msa0057240 | Msa0697140 | 0.804356 | 2.247368e-49 | -8.615850e-47 |
| Msa0057240 | Msa0706370 | 0.878395 | 2.908270e-69 | -8.615850e-47 |
| Msa0057240 | Msa0707220 | 0.821366 | 4.196064e-53 | -8.615850e-47 |
| Msa0057240 | Msa0716450 | 0.815869 | 7.412183e-52 | -8.615850e-47 |
| Msa0057240 | Msa0717670 | 0.816464 | 5.457562e-52 | -8.615850e-47 |
| Msa0057240 | Msa0730180 | 0.802360 | 5.820494e-49 | -8.615850e-47 |
| Msa0057240 | Msa0737190 | 0.813969 | 1.955968e-51 | -8.615850e-47 |
| Msa0057240 | Msa0739430 | 0.820593 | 6.319825e-53 | -8.615850e-47 |
| Msa0057240 | Msa0740420 | 0.814599 | 1.419023e-51 | -8.615850e-47 |
| Msa0057240 | Msa0741900 | 0.843994 | 9.948868e-59 | -8.615850e-47 |
| Msa0057240 | Msa0747780 | 0.830302 | 3.170431e-55 | -8.615850e-47 |
| Msa0057240 | Msa0754030 | 0.810119 | 1.350801e-50 | -8.615850e-47 |
| Msa0057240 | Msa0754720 | -0.813346 | 2.681676e-51 | -8.615850e-47 |
| Msa0057240 | Msa0757950 | 0.804753 | 1.857087e-49 | -8.615850e-47 |
| Msa0057240 | Msa0758320 | 0.801736 | 7.823720e-49 | -8.615850e-47 |
| Msa0057240 | Msa0772020 | 0.833909 | 4.066217e-56 | -8.615850e-47 |
| Msa0057240 | Msa0778930 | 0.823842 | 1.114069e-53 | -8.615850e-47 |
| Msa0057240 | Msa0781570 | 0.814321 | 1.634873e-51 | -8.615850e-47 |
| Msa0057240 | Msa0807110 | 0.813791 | 2.139925e-51 | -8.615850e-47 |
| Msa0057240 | Msa0810020 | 0.864608 | 1.075593e-64 | -8.615850e-47 |
| Msa0057240 | Msa0810480 | 0.803593 | 3.237062e-49 | -8.615850e-47 |
| Msa0057240 | Msa0813100 | 0.801071 | 1.070356e-48 | -8.615850e-47 |
| Msa0057240 | Msa0816450 | 0.806364 | 8.526635e-50 | -8.615850e-47 |
| Msa0057240 | Msa0820670 | 0.825182 | 5.388873e-54 | -8.615850e-47 |
| Msa0057240 | Msa0822990 | 0.834014 | 3.829322e-56 | -8.615850e-47 |
| Msa0057240 | Msa0833040 | 0.822477 | 2.320145e-53 | -8.615850e-47 |
| Msa0057240 | Msa0847990 | 0.820523 | 6.557939e-53 | -8.615850e-47 |
| Msa0057240 | Msa0850500 | 0.851709 | 7.437704e-61 | -8.615850e-47 |
| Msa0057240 | Msa0853320 | 0.827530 | 1.486803e-54 | -8.615850e-47 |
| Msa0057240 | Msa0855310 | 0.818267 | 2.143107e-52 | -8.615850e-47 |
| Msa0057240 | Msa0862100 | 0.860764 | 1.645247e-63 | -8.615850e-47 |
| Msa0057240 | Msa0870620 | 0.854095 | 1.546242e-61 | -8.615850e-47 |
| Msa0057240 | Msa0870630 | 0.802813 | 4.694943e-49 | -8.615850e-47 |
| Msa0057240 | Msa0870690 | 0.850846 | 1.304080e-60 | -8.615850e-47 |
| Msa0057240 | Msa0872310 | 0.833995 | 3.869798e-56 | -8.615850e-47 |
| Msa0057240 | Msa0873190 | 0.853377 | 2.488222e-61 | -8.615850e-47 |
| Msa0057240 | Msa0880500 | 0.812061 | 5.123626e-51 | -8.615850e-47 |
| Msa0057240 | Msa0880710 | 0.859056 | 5.384295e-63 | -8.615850e-47 |
| Msa0057240 | Msa0885060 | 0.854548 | 1.143744e-61 | -8.615850e-47 |
| Msa0057240 | Msa0886980 | 0.805766 | 1.138993e-49 | -8.615850e-47 |
| Msa0057240 | Msa0890250 | 0.809148 | 2.183354e-50 | -8.615850e-47 |
| Msa0057240 | Msa0893810 | 0.836388 | 9.636121e-57 | -8.615850e-47 |
| Msa0057240 | Msa0903730 | 0.808269 | 3.364760e-50 | -8.615850e-47 |
| Msa0057240 | Msa0905550 | 0.844469 | 7.414105e-59 | -8.615850e-47 |
| Msa0057240 | Msa0906370 | 0.835707 | 1.434967e-56 | -8.615850e-47 |
| Msa0057240 | Msa0907700 | 0.819923 | 8.997865e-53 | -8.615850e-47 |
| Msa0057240 | Msa0908170 | 0.831455 | 1.653391e-55 | -8.615850e-47 |
| Msa0057240 | Msa0925160 | 0.803339 | 3.654166e-49 | -8.615850e-47 |
| Msa0057240 | Msa0933440 | 0.806897 | 6.581322e-50 | -8.615850e-47 |
| Msa0057240 | Msa0936270 | 0.832450 | 9.385763e-56 | -8.615850e-47 |
| Msa0057240 | Msa0937550 | 0.836636 | 8.330374e-57 | -8.615850e-47 |
| Msa0057240 | Msa0938430 | 0.813952 | 1.972049e-51 | -8.615850e-47 |
| Msa0057240 | Msa0946320 | 0.838729 | 2.418980e-57 | -8.615850e-47 |
| Msa0057240 | Msa0951710 | 0.820675 | 6.050619e-53 | -8.615850e-47 |
| Msa0057240 | Msa0974750 | 0.800109 | 1.681375e-48 | -8.615850e-47 |
| Msa0057240 | Msa0975580 | 0.864206 | 1.436370e-64 | -8.615850e-47 |
| Msa0057240 | Msa0980440 | 0.801824 | 7.503499e-49 | -8.615850e-47 |
| Msa0057240 | Msa0988480 | 0.838761 | 2.372818e-57 | -8.615850e-47 |
| Msa0057240 | Msa0993530 | 0.814377 | 1.589012e-51 | -8.615850e-47 |
| Msa0057240 | Msa0996080 | 0.803932 | 2.752351e-49 | -8.615850e-47 |
| Msa0057240 | Msa1007350 | 0.800421 | 1.452920e-48 | -8.615850e-47 |
| Msa0057240 | Msa1009000 | 0.823236 | 1.543867e-53 | -8.615850e-47 |
| Msa0057240 | Msa1014270 | 0.811551 | 6.615647e-51 | -8.615850e-47 |
| Msa0057240 | Msa1018790 | 0.849028 | 4.205125e-60 | -8.615850e-47 |
| Msa0057240 | Msa1019020 | 0.804439 | 2.158745e-49 | -8.615850e-47 |
| Msa0057240 | Msa1020710 | 0.817336 | 3.476215e-52 | -8.615850e-47 |
| Msa0057240 | Msa1020720 | 0.826272 | 2.971465e-54 | -8.615850e-47 |
| Msa0057240 | Msa1026760 | 0.801160 | 1.026358e-48 | -8.615850e-47 |
| Msa0057240 | Msa1026790 | 0.800337 | 1.511186e-48 | -8.615850e-47 |
| Msa0057240 | Msa1032450 | 0.814061 | 1.866067e-51 | -8.615850e-47 |
| Msa0057240 | Msa1033560 | 0.884850 | 1.348375e-71 | -8.615850e-47 |
| Msa0057240 | Msa1037900 | 0.805044 | 1.613979e-49 | -8.615850e-47 |
| Msa0057240 | Msa1037920 | 0.834679 | 2.606460e-56 | -8.615850e-47 |
| Msa0057240 | Msa1041530 | 0.816743 | 4.724348e-52 | -8.615850e-47 |
| Msa0057240 | Msa1042670 | 0.817335 | 3.478160e-52 | -8.615850e-47 |
| Msa0057240 | Msa1049010 | 0.825614 | 4.259143e-54 | -8.615850e-47 |
| Msa0057240 | Msa1055260 | 0.828165 | 1.046290e-54 | -8.615850e-47 |
| Msa0057240 | Msa1055280 | 0.823998 | 1.024000e-53 | -8.615850e-47 |
| Msa0057240 | Msa1055500 | 0.866991 | 1.900878e-65 | -8.615850e-47 |
| Msa0057240 | Msa1069300 | 0.825426 | 4.719095e-54 | -8.615850e-47 |
| Msa0057240 | Msa1072350 | 0.803727 | 3.036575e-49 | -8.615850e-47 |
| Msa0057240 | Msa1073340 | 0.842976 | 1.860109e-58 | -8.615850e-47 |
| Msa0057240 | Msa1073350 | 0.884220 | 2.309388e-71 | -8.615850e-47 |
| Msa0057240 | Msa1081570 | 0.809041 | 2.301235e-50 | -8.615850e-47 |
| Msa0057240 | Msa1082500 | 0.805982 | 1.026064e-49 | -8.615850e-47 |
| Msa0057240 | Msa1087470 | 0.816406 | 5.621108e-52 | -8.615850e-47 |
| Msa0057240 | Msa1095470 | 0.806038 | 9.989035e-50 | -8.615850e-47 |
| Msa0057240 | Msa1098560 | 0.824931 | 6.178084e-54 | -8.615850e-47 |
| Msa0057240 | Msa1104000 | 0.806395 | 8.398405e-50 | -8.615850e-47 |
| Msa0057240 | Msa1106810 | 0.825496 | 4.542618e-54 | -8.615850e-47 |
| Msa0057240 | Msa1113850 | 0.886033 | 4.863185e-72 | -8.615850e-47 |
| Msa0057240 | Msa1116930 | 0.823167 | 1.602803e-53 | -8.615850e-47 |
| Msa0057240 | Msa1123880 | 0.825072 | 5.720240e-54 | -8.615850e-47 |
| Msa0057240 | Msa1127140 | 0.815664 | 8.233598e-52 | -8.615850e-47 |
| Msa0057240 | Msa1129960 | 0.801517 | 8.673608e-49 | -8.615850e-47 |
| Msa0057240 | Msa1129980 | 0.828670 | 7.902782e-55 | -8.615850e-47 |
| Msa0057240 | Msa1136230 | 0.822537 | 2.246783e-53 | -8.615850e-47 |
| Msa0057240 | Msa1139410 | 0.820137 | 8.040718e-53 | -8.615850e-47 |
| Msa0057240 | Msa1139810 | 0.837729 | 4.376375e-57 | -8.615850e-47 |
| Msa0057240 | Msa1145020 | 0.825286 | 5.092717e-54 | -8.615850e-47 |
| Msa0057240 | Msa1147570 | 0.805729 | 1.159661e-49 | -8.615850e-47 |
| Msa0057240 | Msa1150230 | 0.812163 | 4.868355e-51 | -8.615850e-47 |
| Msa0057240 | Msa1151960 | 0.808474 | 3.042976e-50 | -8.615850e-47 |
| Msa0057240 | Msa1160400 | 0.882509 | 9.813484e-71 | -8.615850e-47 |
| Msa0057240 | Msa1166400 | 0.810497 | 1.119531e-50 | -8.615850e-47 |
| Msa0057240 | Msa1169990 | 0.819920 | 9.015303e-53 | -8.615850e-47 |
| Msa0057240 | Msa1172590 | 0.815227 | 1.029716e-51 | -8.615850e-47 |
| Msa0057240 | Msa1172670 | 0.802531 | 5.367494e-49 | -8.615850e-47 |
| Msa0057240 | Msa1185540 | 0.811826 | 5.765421e-51 | -8.615850e-47 |
| Msa0057240 | Msa1201990 | 0.808838 | 2.543752e-50 | -8.615850e-47 |
| Msa0057240 | Msa1206020 | 0.805502 | 1.294487e-49 | -8.615850e-47 |
| Msa0057240 | Msa1213060 | 0.828690 | 7.812859e-55 | -8.615850e-47 |
| Msa0057240 | Msa1218480 | 0.857638 | 1.424639e-62 | -8.615850e-47 |
| Msa0057240 | Msa1220230 | 0.818213 | 2.204405e-52 | -8.615850e-47 |
| Msa0057240 | Msa1221560 | 0.805623 | 1.220892e-49 | -8.615850e-47 |
| Msa0057240 | Msa1228610 | 0.805080 | 1.586200e-49 | -8.615850e-47 |
| Msa0057240 | Msa1228890 | 0.815162 | 1.064618e-51 | -8.615850e-47 |
| Msa0057240 | Msa1249870 | 0.813274 | 2.781398e-51 | -8.615850e-47 |
| Msa0057240 | Msa1254190 | 0.819910 | 9.059189e-53 | -8.615850e-47 |
| Msa0057240 | Msa1276220 | 0.807021 | 6.195991e-50 | -8.615850e-47 |
| Msa0057240 | Msa1278840 | 0.804255 | 2.358430e-49 | -8.615850e-47 |
| Msa0057240 | Msa1280560 | 0.815896 | 7.307486e-52 | -8.615850e-47 |
| Msa0057240 | Msa1281720 | 0.828658 | 7.953315e-55 | -8.615850e-47 |
| Msa0057240 | Msa1289280 | 0.809949 | 1.469042e-50 | -8.615850e-47 |
| Msa0057240 | Msa1297090 | 0.803325 | 3.679805e-49 | -8.615850e-47 |
| Msa0057240 | Msa1302150 | 0.800991 | 1.111723e-48 | -8.615850e-47 |
| Msa0057240 | Msa1316170 | 0.801000 | 1.106744e-48 | -8.615850e-47 |
| Msa0057240 | Msa1321000 | 0.850425 | 1.712225e-60 | -8.615850e-47 |
| Msa0057240 | Msa1327760 | 0.808532 | 2.957304e-50 | -8.615850e-47 |
| Msa0057240 | Msa1328850 | 0.804494 | 2.103088e-49 | -8.615850e-47 |
| Msa0057240 | Msa1329990 | 0.808409 | 3.141794e-50 | -8.615850e-47 |
| Msa0057240 | Msa1340020 | 0.805924 | 1.055471e-49 | -8.615850e-47 |
| Msa0057240 | Msa1359280 | 0.813246 | 2.821049e-51 | -8.615850e-47 |
| Msa0057240 | Msa1362510 | 0.844011 | 9.842198e-59 | -8.615850e-47 |
| Msa0057240 | Msa1363890 | 0.815361 | 9.617567e-52 | -8.615850e-47 |
| Msa0057240 | Msa1365200 | 0.807224 | 5.611214e-50 | -8.615850e-47 |
| Msa0057240 | Msa1374440 | 0.858008 | 1.106328e-62 | -8.615850e-47 |
| Msa0057240 | Msa1375940 | 0.801068 | 1.071848e-48 | -8.615850e-47 |
| Msa0057240 | Msa1379990 | 0.860535 | 1.930315e-63 | -8.615850e-47 |
| Msa0057240 | Msa1385620 | 0.801419 | 9.084395e-49 | -8.615850e-47 |
| Msa0057240 | Msa1390310 | 0.825739 | 3.977601e-54 | -8.615850e-47 |
| Msa0057240 | Msa1408790 | 0.827248 | 1.737799e-54 | -8.615850e-47 |
| Msa0057240 | Msa1408870 | 0.814480 | 1.507692e-51 | -8.615850e-47 |
| Msa0057240 | Msa1412140 | 0.806806 | 6.879420e-50 | -8.615850e-47 |
| Msa0057240 | Msa1414930 | 0.818619 | 1.783837e-52 | -8.615850e-47 |
| Msa0057240 | Msa1419010 | 0.815496 | 8.973547e-52 | -8.615850e-47 |
| Msa0057240 | Msa1420060 | 0.902851 | 6.347714e-79 | -8.615850e-47 |
| Msa0057240 | Msa1422270 | 0.849625 | 2.868285e-60 | -8.615850e-47 |
| Msa0057240 | Msa1425250 | 0.810414 | 1.166221e-50 | -8.615850e-47 |
| Msa0057240 | Msa1429420 | 0.987242 | 1.474654e-169 | -8.615850e-47 |
| Msa0057240 | Msa1429830 | 0.806169 | 9.370456e-50 | -8.615850e-47 |
| Msa0057240 | Msa1435670 | 0.837890 | 3.980348e-57 | -8.615850e-47 |
| Msa0057240 | Msa1436040 | 0.819065 | 1.412477e-52 | -8.615850e-47 |
| Msa0057240 | Msa1440340 | 0.869655 | 2.630536e-66 | -8.615850e-47 |
| Msa0057240 | Msa1440600 | 0.815458 | 9.152104e-52 | -8.615850e-47 |
| Msa0057240 | Msa1445790 | 0.829567 | 4.789667e-55 | -8.615850e-47 |
| Msa0057240 | Msa1453710 | 0.800583 | 1.346493e-48 | -8.615850e-47 |
| Msa0057240 | Msa1466460 | 0.823177 | 1.594024e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057240 | MtrunA17_Chr1g0146631 | 95.385 | 325 | 15 | 0 | 1 | 325 | 1 | 325 | 0.0 | 647 |
| Msa0057240 | MtrunA17_Chr1g0147331 | 95.692 | 325 | 14 | 0 | 1 | 325 | 1 | 325 | 0.0 | 620 |
| Msa0057240 | MtrunA17_Chr1g0147311 | 73.353 | 334 | 76 | 6 | 1 | 325 | 27 | 356 | 1.04e-174 | 488 |
| Msa0057240 | MtrunA17_Chr1g0147271 | 63.496 | 389 | 74 | 7 | 1 | 325 | 1 | 385 | 1.24e-164 | 464 |
| Msa0057240 | MtrunA17_Chr1g0147291 | 75.465 | 269 | 59 | 5 | 61 | 325 | 2 | 267 | 1.69e-142 | 403 |
| Msa0057240 | MtrunA17_Chr1g0147261 | 62.883 | 326 | 94 | 5 | 1 | 325 | 1 | 300 | 3.26e-142 | 403 |
| Msa0057240 | MtrunA17_Chr1g0147301 | 69.896 | 289 | 77 | 6 | 43 | 325 | 1 | 285 | 4.17e-142 | 402 |
| Msa0057240 | MtrunA17_Chr3g0139431 | 59.939 | 327 | 120 | 6 | 1 | 323 | 1 | 320 | 2.80e-141 | 402 |
| Msa0057240 | MtrunA17_Chr1g0147241 | 62.577 | 326 | 108 | 5 | 1 | 325 | 1 | 313 | 7.91e-139 | 395 |
| Msa0057240 | MtrunA17_Chr1g0147321 | 78.319 | 226 | 46 | 2 | 98 | 322 | 12 | 235 | 2.29e-129 | 369 |
| Msa0057240 | MtrunA17_Chr1g0147251 | 65.587 | 247 | 76 | 4 | 84 | 325 | 1 | 243 | 4.44e-109 | 317 |
| Msa0057240 | MtrunA17_Chr3g0138231 | 42.411 | 224 | 122 | 4 | 108 | 325 | 45 | 267 | 1.53e-55 | 182 |
| Msa0057240 | MtrunA17_Chr4g0034821 | 42.857 | 224 | 121 | 5 | 108 | 325 | 70 | 292 | 3.63e-54 | 179 |
| Msa0057240 | MtrunA17_Chr3g0144451 | 40.179 | 224 | 127 | 4 | 108 | 325 | 54 | 276 | 5.57e-53 | 175 |
| Msa0057240 | MtrunA17_Chr3g0144421 | 42.342 | 222 | 120 | 6 | 108 | 323 | 82 | 301 | 7.22e-53 | 176 |
| Msa0057240 | MtrunA17_Chr3g0144411 | 39.070 | 215 | 123 | 4 | 113 | 322 | 325 | 536 | 1.43e-44 | 159 |
| Msa0057240 | MtrunA17_Chr3g0144391 | 38.605 | 215 | 124 | 4 | 113 | 322 | 292 | 503 | 4.83e-44 | 157 |
| Msa0057240 | MtrunA17_Chr4g0034451 | 36.441 | 236 | 139 | 7 | 95 | 323 | 294 | 525 | 8.19e-42 | 152 |
| Msa0057240 | MtrunA17_Chr4g0034731 | 37.156 | 218 | 127 | 6 | 113 | 323 | 217 | 431 | 1.02e-40 | 147 |
| Msa0057240 | MtrunA17_Chr4g0034721 | 36.697 | 218 | 128 | 6 | 113 | 323 | 361 | 575 | 5.96e-39 | 145 |
| Msa0057240 | MtrunA17_Chr8g0355861 | 30.031 | 323 | 162 | 9 | 1 | 323 | 1 | 259 | 3.43e-38 | 137 |
| Msa0057240 | MtrunA17_Chr8g0365361 | 36.279 | 215 | 129 | 4 | 113 | 322 | 181 | 392 | 5.87e-38 | 139 |
| Msa0057240 | MtrunA17_Chr2g0318901 | 29.721 | 323 | 155 | 12 | 4 | 323 | 5 | 258 | 1.74e-37 | 135 |
| Msa0057240 | MtrunA17_Chr2g0318871 | 29.595 | 321 | 158 | 11 | 4 | 323 | 5 | 258 | 9.17e-36 | 130 |
| Msa0057240 | MtrunA17_Chr8g0355311 | 44.755 | 143 | 73 | 4 | 181 | 323 | 53 | 189 | 1.86e-35 | 127 |
| Msa0057240 | MtrunA17_Chr4g0034691 | 35.321 | 218 | 131 | 6 | 113 | 323 | 493 | 707 | 1.91e-35 | 135 |
| Msa0057240 | MtrunA17_Chr5g0413591 | 33.333 | 213 | 138 | 4 | 113 | 322 | 415 | 626 | 9.16e-35 | 133 |
| Msa0057240 | MtrunA17_Chr8g0365401 | 34.579 | 214 | 134 | 4 | 113 | 322 | 412 | 623 | 2.97e-34 | 132 |
| Msa0057240 | MtrunA17_Chr8g0355871 | 38.073 | 218 | 103 | 9 | 112 | 323 | 30 | 221 | 6.82e-34 | 124 |
| Msa0057240 | MtrunA17_Chr8g0355331 | 40.260 | 154 | 86 | 4 | 170 | 323 | 273 | 420 | 7.00e-33 | 126 |
| Msa0057240 | MtrunA17_Chr2g0318931 | 28.571 | 301 | 148 | 10 | 26 | 323 | 33 | 269 | 1.07e-32 | 122 |
| Msa0057240 | MtrunA17_Chr8g0355841 | 44.755 | 143 | 73 | 4 | 181 | 323 | 372 | 508 | 2.08e-32 | 126 |
| Msa0057240 | MtrunA17_Chr8g0355321 | 41.958 | 143 | 77 | 4 | 181 | 323 | 165 | 301 | 2.42e-32 | 122 |
| Msa0057240 | MtrunA17_Chr3g0117791 | 33.953 | 215 | 134 | 4 | 113 | 322 | 413 | 624 | 2.79e-32 | 126 |
| Msa0057240 | MtrunA17_Chr6g0485051 | 33.493 | 209 | 128 | 7 | 125 | 325 | 1 | 206 | 8.64e-32 | 118 |
| Msa0057240 | MtrunA17_Chr8g0365381 | 33.333 | 213 | 138 | 4 | 113 | 322 | 429 | 640 | 1.22e-31 | 124 |
| Msa0057240 | MtrunA17_Chr1g0147231 | 71.605 | 81 | 22 | 1 | 99 | 178 | 50 | 130 | 2.03e-31 | 115 |
| Msa0057240 | MtrunA17_Chr1g0168781 | 27.607 | 326 | 165 | 10 | 1 | 323 | 1 | 258 | 4.58e-31 | 117 |
| Msa0057240 | MtrunA17_Chr8g0355831 | 42.759 | 145 | 77 | 4 | 179 | 323 | 212 | 350 | 1.72e-29 | 115 |
| Msa0057240 | MtrunA17_Chr4g0076231 | 35.065 | 154 | 97 | 3 | 172 | 322 | 3 | 156 | 6.47e-28 | 106 |
| Msa0057240 | MtrunA17_Chr5g0412981 | 26.852 | 216 | 152 | 4 | 111 | 322 | 195 | 408 | 9.37e-22 | 95.1 |
| Msa0057240 | MtrunA17_Chr5g0412981 | 26.344 | 186 | 129 | 5 | 127 | 306 | 1 | 184 | 3.20e-13 | 70.1 |
| Msa0057240 | MtrunA17_Chr5g0412991 | 26.852 | 216 | 152 | 4 | 111 | 322 | 195 | 408 | 1.01e-21 | 94.7 |
| Msa0057240 | MtrunA17_Chr5g0412991 | 25.806 | 186 | 130 | 5 | 127 | 306 | 1 | 184 | 6.86e-13 | 68.9 |
| Msa0057240 | MtrunA17_Chr1g0147281 | 74.000 | 50 | 13 | 0 | 1 | 50 | 1 | 50 | 1.07e-19 | 82.0 |
| Msa0057240 | MtrunA17_Chr8g0371951 | 43.038 | 79 | 41 | 2 | 238 | 313 | 10 | 87 | 2.69e-17 | 75.9 |
| Msa0057240 | MtrunA17_Chr5g0412951 | 24.519 | 208 | 151 | 4 | 119 | 322 | 2 | 207 | 8.11e-17 | 77.8 |
| Msa0057240 | MtrunA17_Chr4g0034051 | 42.105 | 76 | 41 | 3 | 251 | 323 | 3 | 78 | 2.16e-16 | 73.2 |
| Msa0057240 | MtrunA17_Chr5g0413021 | 29.457 | 129 | 86 | 3 | 197 | 322 | 1 | 127 | 5.53e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057240 | AT5G25610.1 | 44.103 | 390 | 141 | 11 | 5 | 323 | 7 | 390 | 1.48e-99 | 299 |
| Msa0057240 | AT1G49320.1 | 37.662 | 231 | 132 | 6 | 106 | 325 | 51 | 280 | 7.28e-47 | 160 |
| Msa0057240 | AT1G60390.1 | 36.111 | 216 | 128 | 5 | 113 | 322 | 409 | 620 | 1.32e-34 | 133 |
| Msa0057240 | AT1G70370.2 | 35.514 | 214 | 132 | 4 | 113 | 322 | 411 | 622 | 2.35e-33 | 130 |
| Msa0057240 | AT1G70370.1 | 35.514 | 214 | 132 | 4 | 113 | 322 | 411 | 622 | 2.35e-33 | 130 |
| Msa0057240 | AT1G23760.1 | 34.112 | 214 | 135 | 4 | 113 | 322 | 407 | 618 | 1.01e-30 | 122 |
Find 73 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGATAGTCTTTACTCTTT+TGG | 0.187775 | 1_2:+13175630 | None:intergenic |
| ACTTGAAATGCCAAATGTTT+TGG | 0.214978 | 1_2:+13174016 | None:intergenic |
| AAATGTAGCACTCTTCTTTC+TGG | 0.227762 | 1_2:-13174572 | Msa0057240:CDS |
| TCTTACCTCCTCAACTTTAC+TGG | 0.262120 | 1_2:-13175403 | Msa0057240:CDS |
| TCAGCTTCACTTATCCAATA+TGG | 0.269907 | 1_2:-13175590 | Msa0057240:exon |
| TAAACTGTGAAACTGATTCT+AGG | 0.284637 | 1_2:-13173857 | Msa0057240:three_prime_UTR |
| ATTTATCTGAAGCTGGATAT+TGG | 0.302370 | 1_2:-13174759 | Msa0057240:intron |
| GCAGCATAATTATAAATAAA+TGG | 0.303775 | 1_2:+13174622 | None:intergenic |
| TGTAACATCATTGGAGTCTA+TGG | 0.322922 | 1_2:-13174317 | Msa0057240:CDS |
| TGCCTGAGGATCATGTTGTT+TGG | 0.331746 | 1_2:-13173952 | Msa0057240:CDS |
| AGCAGATTAGTGATGGCTTT+TGG | 0.347892 | 1_2:+13175353 | None:intergenic |
| TTCCACCTTGTTTGATGAAA+AGG | 0.348656 | 1_2:+13174450 | None:intergenic |
| TAAAGCTTACTCTGTGCCTT+TGG | 0.361974 | 1_2:-13174104 | Msa0057240:CDS |
| AACAAGATGAAAATCCATAT+TGG | 0.372048 | 1_2:+13175576 | None:intergenic |
| AAAGCTTTGTGTAACATCAT+TGG | 0.398015 | 1_2:-13174326 | Msa0057240:CDS |
| TGACAGTAAAACACTGCATA+AGG | 0.401155 | 1_2:+13174142 | None:intergenic |
| TATTCTTGGATGACACCAAT+AGG | 0.404945 | 1_2:+13173905 | None:intergenic |
| AGCTTACTCTGTGCCTTTGG+AGG | 0.418522 | 1_2:-13174101 | Msa0057240:CDS |
| TCAGGCAGGAGGTGACAAAC+TGG | 0.434507 | 1_2:+13173968 | None:intergenic |
| AGAAAGAAGAGTGCTACATT+TGG | 0.440436 | 1_2:+13174574 | None:intergenic |
| CAGCAATATACAATAGCATC+TGG | 0.447095 | 1_2:-13174220 | Msa0057240:CDS |
| GTGCCTTTGGAGGGTGCTGA+TGG | 0.447611 | 1_2:-13174091 | Msa0057240:CDS |
| TCCACCTTGTTTGATGAAAA+GGG | 0.448369 | 1_2:+13174451 | None:intergenic |
| AGAATGGAACCCAAAACATT+TGG | 0.452431 | 1_2:-13174026 | Msa0057240:CDS |
| AGCACTCTTCTTTCTGGAAA+AGG | 0.453598 | 1_2:-13174566 | Msa0057240:CDS |
| TCAAATGTAGCTTGTGGTAG+TGG | 0.457950 | 1_2:-13175441 | Msa0057240:intron |
| TAGAAACAAACAAATCCTAT+TGG | 0.458383 | 1_2:-13173920 | Msa0057240:three_prime_UTR |
| CTGGAAAAGGACTTGCATCA+TGG | 0.459024 | 1_2:-13174553 | Msa0057240:CDS |
| GATTTCACTACTTCAAAGCT+TGG | 0.470526 | 1_2:-13174292 | Msa0057240:CDS |
| GCTTACTCTGTGCCTTTGGA+GGG | 0.480708 | 1_2:-13174100 | Msa0057240:CDS |
| TGTGAAGAGCAAGGGATCAA+AGG | 0.490839 | 1_2:-13174355 | Msa0057240:CDS |
| CAAGTACTCAAAGTTCAACC+TGG | 0.499411 | 1_2:-13173998 | Msa0057240:CDS |
| ATGATCAGGAGAAGTTGAGA+TGG | 0.502447 | 1_2:+13175658 | None:intergenic |
| GCATCTGGAGTGAAGAAGTT+GGG | 0.513820 | 1_2:-13174205 | Msa0057240:CDS |
| ATCCAAACAACATGATCCTC+AGG | 0.517927 | 1_2:+13173950 | None:intergenic |
| GGAGTGAAGAGAAAGGAACT+TGG | 0.518251 | 1_2:-13174738 | Msa0057240:CDS |
| GTCAGAAAGGGATACTATGA+AGG | 0.523139 | 1_2:-13174682 | Msa0057240:CDS |
| GACAGTAAAACACTGCATAA+GGG | 0.527238 | 1_2:+13174143 | None:intergenic |
| GGCAAGGGTGGTGTAGATGT+TGG | 0.529745 | 1_2:-13174706 | Msa0057240:CDS |
| AAAATCAAGAAAGGGTCAAA+GGG | 0.531552 | 1_2:-13174409 | Msa0057240:CDS |
| AGCATCTGGAGTGAAGAAGT+TGG | 0.536857 | 1_2:-13174206 | Msa0057240:CDS |
| TGTAGATGTTGGAGTCAGAA+AGG | 0.539383 | 1_2:-13174695 | Msa0057240:CDS |
| CATTGAAGAGGTGGGAAGCA+TGG | 0.540494 | 1_2:+13175376 | None:intergenic |
| TGACAAACTGGAACAGTCCC+AGG | 0.541759 | 1_2:+13173980 | None:intergenic |
| AAAGGAACTTGGGTGGATGT+AGG | 0.554611 | 1_2:-13174727 | Msa0057240:CDS |
| GGATATTGGAGTGAAGAGAA+AGG | 0.556237 | 1_2:-13174745 | Msa0057240:CDS |
| AACTTGGGTGGATGTAGGCA+AGG | 0.557293 | 1_2:-13174722 | Msa0057240:CDS |
| AGTTTGTCACCTCCTGCCTG+AGG | 0.562196 | 1_2:-13173966 | Msa0057240:CDS |
| GTAGATGTTGGAGTCAGAAA+GGG | 0.562316 | 1_2:-13174694 | Msa0057240:CDS |
| GTCAGTGAGTGTGAAGAGCA+AGG | 0.568006 | 1_2:-13174364 | Msa0057240:CDS |
| CTTCCATCAGCACCCTCCAA+AGG | 0.576677 | 1_2:+13174088 | None:intergenic |
| TGAAGAGAAAGGAACTTGGG+TGG | 0.577433 | 1_2:-13174734 | Msa0057240:CDS |
| TTGCTCTTCACACTCACTGA+CGG | 0.578201 | 1_2:+13174366 | None:intergenic |
| TGGGTGGATGTAGGCAAGGG+TGG | 0.579389 | 1_2:-13174718 | Msa0057240:CDS |
| GAGTGAAGAGAAAGGAACTT+GGG | 0.579403 | 1_2:-13174737 | Msa0057240:CDS |
| GGTGGCTCTGATGTGAATGT+TGG | 0.588281 | 1_2:-13174658 | Msa0057240:CDS |
| TCAGTGAGTGTGAAGAGCAA+GGG | 0.599484 | 1_2:-13174363 | Msa0057240:CDS |
| AAGGGATACTATGAAGGAGG+TGG | 0.599632 | 1_2:-13174676 | Msa0057240:CDS |
| AACTTGGCGCGGCAAGAATG+TGG | 0.603165 | 1_2:+13174486 | None:intergenic |
| GACTTCCAGTAAAGTTGAGG+AGG | 0.605659 | 1_2:+13175398 | None:intergenic |
| GTCACACTGATACATCAGAA+TGG | 0.606500 | 1_2:-13174042 | Msa0057240:CDS |
| AAACAACATGATCCTCAGGC+AGG | 0.608017 | 1_2:+13173954 | None:intergenic |
| TCTGATGTGAATGTTGGAGT+TGG | 0.609740 | 1_2:-13174652 | Msa0057240:CDS |
| ATGGACTTCCAGTAAAGTTG+AGG | 0.616898 | 1_2:+13175395 | None:intergenic |
| AGGGTATTGAATTAGCAACT+TGG | 0.619732 | 1_2:+13174470 | None:intergenic |
| AAGTACTCAAAGTTCAACCT+GGG | 0.622856 | 1_2:-13173997 | Msa0057240:CDS |
| AGGGTGTAGCAGATTAGTGA+TGG | 0.623388 | 1_2:+13175346 | None:intergenic |
| ATTGAATTAGCAACTTGGCG+CGG | 0.637675 | 1_2:+13174475 | None:intergenic |
| CAACATGATCCTCAGGCAGG+AGG | 0.654087 | 1_2:+13173957 | None:intergenic |
| ACTTGGGTGGATGTAGGCAA+GGG | 0.659855 | 1_2:-13174721 | Msa0057240:CDS |
| ATCACTAATCTGCTACACCC+TGG | 0.665412 | 1_2:-13175344 | Msa0057240:intron |
| AGAGCAAGGGATCAAAGGAG+AGG | 0.677572 | 1_2:-13174350 | Msa0057240:CDS |
| AGAAAGGGATACTATGAAGG+AGG | 0.679610 | 1_2:-13174679 | Msa0057240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAATTATTTGAAGAAAAT+TGG | + | chr1_2:13173853-13173872 | None:intergenic | 15.0% |
| !!! | ATACTCATTTTATATATAGA+TGG | - | chr1_2:13174085-13174104 | Msa0057240:CDS | 15.0% |
| !!! | GTTTAAAATGATTTCATTTT+AGG | - | chr1_2:13174124-13174143 | Msa0057240:CDS | 15.0% |
| !! | AAATAAATAAACCAAGTAAT+TGG | - | chr1_2:13174387-13174406 | Msa0057240:CDS | 15.0% |
| !! | AATAAATAAACCAAGTAATT+GGG | - | chr1_2:13174388-13174407 | Msa0057240:CDS | 15.0% |
| !! | TTAAATAAATAAAAAGTCTG+TGG | - | chr1_2:13174521-13174540 | Msa0057240:CDS | 15.0% |
| !! | GTTAATTATTTGAAGAAAAT+TGG | + | chr1_2:13173853-13173872 | None:intergenic | 15.0% |
| !!! | ATACTCATTTTATATATAGA+TGG | - | chr1_2:13174085-13174104 | Msa0057240:CDS | 15.0% |
| !!! | GTTTAAAATGATTTCATTTT+AGG | - | chr1_2:13174124-13174143 | Msa0057240:CDS | 15.0% |
| !! | AAATAAATAAACCAAGTAAT+TGG | - | chr1_2:13174387-13174406 | Msa0057240:CDS | 15.0% |
| !! | AATAAATAAACCAAGTAATT+GGG | - | chr1_2:13174388-13174407 | Msa0057240:CDS | 15.0% |
| !! | TTAAATAAATAAAAAGTCTG+TGG | - | chr1_2:13174521-13174540 | Msa0057240:CDS | 15.0% |
| !!! | GACTATCTTTTTTTTTTCTT+TGG | - | chr1_2:13173740-13173759 | Msa0057240:three_prime_UTR | 20.0% |
| !!! | ATGAAATCATTTTAAACACA+TGG | + | chr1_2:13174121-13174140 | None:intergenic | 20.0% |
| !! | GCAGCATAATTATAAATAAA+TGG | + | chr1_2:13174738-13174757 | None:intergenic | 20.0% |
| !! | AACAAGTTAAAAATCAAGAA+AGG | - | chr1_2:13174939-13174958 | Msa0057240:intron | 20.0% |
| !! | ACAAGTTAAAAATCAAGAAA+GGG | - | chr1_2:13174940-13174959 | Msa0057240:intron | 20.0% |
| !!! | TGTTTTACTTTTACAGTTTT+AGG | - | chr1_2:13175604-13175623 | Msa0057240:five_prime_UTR | 20.0% |
| !!! | GACTATCTTTTTTTTTTCTT+TGG | - | chr1_2:13173740-13173759 | Msa0057240:three_prime_UTR | 20.0% |
| !!! | ATGAAATCATTTTAAACACA+TGG | + | chr1_2:13174121-13174140 | None:intergenic | 20.0% |
| !! | GCAGCATAATTATAAATAAA+TGG | + | chr1_2:13174738-13174757 | None:intergenic | 20.0% |
| !! | AACAAGTTAAAAATCAAGAA+AGG | - | chr1_2:13174939-13174958 | Msa0057240:intron | 20.0% |
| !! | ACAAGTTAAAAATCAAGAAA+GGG | - | chr1_2:13174940-13174959 | Msa0057240:intron | 20.0% |
| !!! | TGTTTTACTTTTACAGTTTT+AGG | - | chr1_2:13175604-13175623 | Msa0057240:five_prime_UTR | 20.0% |
| !! | AAAGATAGTCTTTACTCTTT+TGG | + | chr1_2:13173730-13173749 | None:intergenic | 25.0% |
| ! | AACAAGATGAAAATCCATAT+TGG | + | chr1_2:13173784-13173803 | None:intergenic | 25.0% |
| ! | ACCATGAAAAAAGTAATGAT+GGG | + | chr1_2:13173807-13173826 | None:intergenic | 25.0% |
| ! | ATTTAATTCATGCACATTGT+CGG | - | chr1_2:13174147-13174166 | Msa0057240:CDS | 25.0% |
| ! | AAAGGACTTATGATATATGA+AGG | - | chr1_2:13174354-13174373 | Msa0057240:CDS | 25.0% |
| !!! | TATTTTTTGTGTTAACTCTC+CGG | + | chr1_2:13174501-13174520 | None:intergenic | 25.0% |
| ! | TAGAAACAAACAAATCCTAT+TGG | - | chr1_2:13175437-13175456 | Msa0057240:intron | 25.0% |
| ! | AAAAACTGTGTAACTATTCT+TGG | + | chr1_2:13175469-13175488 | None:intergenic | 25.0% |
| !! | ATACAGTGAAGCTTTTTATT+TGG | - | chr1_2:13175671-13175690 | Msa0057240:five_prime_UTR | 25.0% |
| !!! | TACAGTGAAGCTTTTTATTT+GGG | - | chr1_2:13175672-13175691 | Msa0057240:five_prime_UTR | 25.0% |
| !! | AAAGATAGTCTTTACTCTTT+TGG | + | chr1_2:13173730-13173749 | None:intergenic | 25.0% |
| ! | AACAAGATGAAAATCCATAT+TGG | + | chr1_2:13173784-13173803 | None:intergenic | 25.0% |
| ! | ACCATGAAAAAAGTAATGAT+GGG | + | chr1_2:13173807-13173826 | None:intergenic | 25.0% |
| ! | ATTTAATTCATGCACATTGT+CGG | - | chr1_2:13174147-13174166 | Msa0057240:CDS | 25.0% |
| ! | AAAGGACTTATGATATATGA+AGG | - | chr1_2:13174354-13174373 | Msa0057240:CDS | 25.0% |
| !!! | TATTTTTTGTGTTAACTCTC+CGG | + | chr1_2:13174501-13174520 | None:intergenic | 25.0% |
| ! | TAGAAACAAACAAATCCTAT+TGG | - | chr1_2:13175437-13175456 | Msa0057240:intron | 25.0% |
| ! | AAAAACTGTGTAACTATTCT+TGG | + | chr1_2:13175469-13175488 | None:intergenic | 25.0% |
| !! | ATACAGTGAAGCTTTTTATT+TGG | - | chr1_2:13175671-13175690 | Msa0057240:five_prime_UTR | 25.0% |
| !!! | TACAGTGAAGCTTTTTATTT+GGG | - | chr1_2:13175672-13175691 | Msa0057240:five_prime_UTR | 25.0% |
| GAGATGGAATGAAAAAACAA+AGG | + | chr1_2:13173686-13173705 | None:intergenic | 30.0% | |
| !!! | TCCCATCATTACTTTTTTCA+TGG | - | chr1_2:13173803-13173822 | Msa0057240:three_prime_UTR | 30.0% |
| CACCATGAAAAAAGTAATGA+TGG | + | chr1_2:13173808-13173827 | None:intergenic | 30.0% | |
| TTGAATTATTCGTCATAGAG+AGG | + | chr1_2:13174431-13174450 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGTGTTAACTCTCC+GGG | + | chr1_2:13174500-13174519 | None:intergenic | 30.0% |
| ! | TTACTCTATTTATCTGAAGC+TGG | - | chr1_2:13174591-13174610 | Msa0057240:CDS | 30.0% |
| ! | ATTTATCTGAAGCTGGATAT+TGG | - | chr1_2:13174598-13174617 | Msa0057240:CDS | 30.0% |
| ! | AATACCCTTTTCATCAAACA+AGG | - | chr1_2:13174902-13174921 | Msa0057240:intron | 30.0% |
| AAAAATCAAGAAAGGGTCAA+AGG | - | chr1_2:13174947-13174966 | Msa0057240:intron | 30.0% | |
| AAAATCAAGAAAGGGTCAAA+GGG | - | chr1_2:13174948-13174967 | Msa0057240:intron | 30.0% | |
| ! | AAAGCTTTGTGTAACATCAT+TGG | - | chr1_2:13175031-13175050 | Msa0057240:intron | 30.0% |
| AAAGCTTGGAAAAAATGTTG+AGG | - | chr1_2:13175079-13175098 | Msa0057240:intron | 30.0% | |
| ! | CTTGAAATGCCAAATGTTTT+GGG | + | chr1_2:13175343-13175362 | None:intergenic | 30.0% |
| ! | ACTTGAAATGCCAAATGTTT+TGG | + | chr1_2:13175344-13175363 | None:intergenic | 30.0% |
| ! | TAAACTGTGAAACTGATTCT+AGG | - | chr1_2:13175500-13175519 | Msa0057240:intron | 30.0% |
| GAGATGGAATGAAAAAACAA+AGG | + | chr1_2:13173686-13173705 | None:intergenic | 30.0% | |
| !!! | TCCCATCATTACTTTTTTCA+TGG | - | chr1_2:13173803-13173822 | Msa0057240:three_prime_UTR | 30.0% |
| CACCATGAAAAAAGTAATGA+TGG | + | chr1_2:13173808-13173827 | None:intergenic | 30.0% | |
| TTGAATTATTCGTCATAGAG+AGG | + | chr1_2:13174431-13174450 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGTGTTAACTCTCC+GGG | + | chr1_2:13174500-13174519 | None:intergenic | 30.0% |
| ! | TTACTCTATTTATCTGAAGC+TGG | - | chr1_2:13174591-13174610 | Msa0057240:CDS | 30.0% |
| ! | ATTTATCTGAAGCTGGATAT+TGG | - | chr1_2:13174598-13174617 | Msa0057240:CDS | 30.0% |
| ! | AATACCCTTTTCATCAAACA+AGG | - | chr1_2:13174902-13174921 | Msa0057240:intron | 30.0% |
| AAAAATCAAGAAAGGGTCAA+AGG | - | chr1_2:13174947-13174966 | Msa0057240:intron | 30.0% | |
| AAAATCAAGAAAGGGTCAAA+GGG | - | chr1_2:13174948-13174967 | Msa0057240:intron | 30.0% | |
| ! | AAAGCTTTGTGTAACATCAT+TGG | - | chr1_2:13175031-13175050 | Msa0057240:intron | 30.0% |
| AAAGCTTGGAAAAAATGTTG+AGG | - | chr1_2:13175079-13175098 | Msa0057240:intron | 30.0% | |
| ! | CTTGAAATGCCAAATGTTTT+GGG | + | chr1_2:13175343-13175362 | None:intergenic | 30.0% |
| ! | ACTTGAAATGCCAAATGTTT+TGG | + | chr1_2:13175344-13175363 | None:intergenic | 30.0% |
| ! | TAAACTGTGAAACTGATTCT+AGG | - | chr1_2:13175500-13175519 | Msa0057240:intron | 30.0% |
| !! | CTCTTTTGGAAGAAATGATC+AGG | + | chr1_2:13173716-13173735 | None:intergenic | 35.0% |
| TCAGCTTCACTTATCCAATA+TGG | - | chr1_2:13173767-13173786 | Msa0057240:three_prime_UTR | 35.0% | |
| CTATTCTCAAATGTAGCTTG+TGG | - | chr1_2:13173910-13173929 | Msa0057240:three_prime_UTR | 35.0% | |
| CTAGACTATGATACTAACCA+GGG | + | chr1_2:13174033-13174052 | None:intergenic | 35.0% | |
| TCTAGACTATGATACTAACC+AGG | + | chr1_2:13174034-13174053 | None:intergenic | 35.0% | |
| TCAGATGATCTCTATCAGAA+AGG | - | chr1_2:13174336-13174355 | Msa0057240:CDS | 35.0% | |
| ACCAAGTAATTGGGTTTAAG+TGG | - | chr1_2:13174397-13174416 | Msa0057240:CDS | 35.0% | |
| ACCACTTAAACCCAATTACT+TGG | + | chr1_2:13174401-13174420 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTGTTAACTCTCCG+GGG | + | chr1_2:13174499-13174518 | None:intergenic | 35.0% |
| !! | AGAAAGAAGAGTGCTACATT+TGG | + | chr1_2:13174786-13174805 | None:intergenic | 35.0% |
| AAATGTAGCACTCTTCTTTC+TGG | - | chr1_2:13174785-13174804 | Msa0057240:intron | 35.0% | |
| !! | AGGGTATTGAATTAGCAACT+TGG | + | chr1_2:13174890-13174909 | None:intergenic | 35.0% |
| ! | TCCACCTTGTTTGATGAAAA+GGG | + | chr1_2:13174909-13174928 | None:intergenic | 35.0% |
| ! | TTCCACCTTGTTTGATGAAA+AGG | + | chr1_2:13174910-13174929 | None:intergenic | 35.0% |
| TGTAACATCATTGGAGTCTA+TGG | - | chr1_2:13175040-13175059 | Msa0057240:intron | 35.0% | |
| GATTTCACTACTTCAAAGCT+TGG | - | chr1_2:13175065-13175084 | Msa0057240:intron | 35.0% | |
| CAGCAATATACAATAGCATC+TGG | - | chr1_2:13175137-13175156 | Msa0057240:intron | 35.0% | |
| GACAGTAAAACACTGCATAA+GGG | + | chr1_2:13175217-13175236 | None:intergenic | 35.0% | |
| TGACAGTAAAACACTGCATA+AGG | + | chr1_2:13175218-13175237 | None:intergenic | 35.0% | |
| AGAATGGAACCCAAAACATT+TGG | - | chr1_2:13175331-13175350 | Msa0057240:intron | 35.0% | |
| AAGTACTCAAAGTTCAACCT+GGG | - | chr1_2:13175360-13175379 | Msa0057240:CDS | 35.0% | |
| TATTCTTGGATGACACCAAT+AGG | + | chr1_2:13175455-13175474 | None:intergenic | 35.0% | |
| !! | CTCTTTTGGAAGAAATGATC+AGG | + | chr1_2:13173716-13173735 | None:intergenic | 35.0% |
| TCAGCTTCACTTATCCAATA+TGG | - | chr1_2:13173767-13173786 | Msa0057240:three_prime_UTR | 35.0% | |
| CTATTCTCAAATGTAGCTTG+TGG | - | chr1_2:13173910-13173929 | Msa0057240:three_prime_UTR | 35.0% | |
| CTAGACTATGATACTAACCA+GGG | + | chr1_2:13174033-13174052 | None:intergenic | 35.0% | |
| TCTAGACTATGATACTAACC+AGG | + | chr1_2:13174034-13174053 | None:intergenic | 35.0% | |
| TCAGATGATCTCTATCAGAA+AGG | - | chr1_2:13174336-13174355 | Msa0057240:CDS | 35.0% | |
| ACCAAGTAATTGGGTTTAAG+TGG | - | chr1_2:13174397-13174416 | Msa0057240:CDS | 35.0% | |
| ACCACTTAAACCCAATTACT+TGG | + | chr1_2:13174401-13174420 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTGTTAACTCTCCG+GGG | + | chr1_2:13174499-13174518 | None:intergenic | 35.0% |
| !! | AGAAAGAAGAGTGCTACATT+TGG | + | chr1_2:13174786-13174805 | None:intergenic | 35.0% |
| AAATGTAGCACTCTTCTTTC+TGG | - | chr1_2:13174785-13174804 | Msa0057240:intron | 35.0% | |
| !! | AGGGTATTGAATTAGCAACT+TGG | + | chr1_2:13174890-13174909 | None:intergenic | 35.0% |
| ! | TCCACCTTGTTTGATGAAAA+GGG | + | chr1_2:13174909-13174928 | None:intergenic | 35.0% |
| ! | TTCCACCTTGTTTGATGAAA+AGG | + | chr1_2:13174910-13174929 | None:intergenic | 35.0% |
| TGTAACATCATTGGAGTCTA+TGG | - | chr1_2:13175040-13175059 | Msa0057240:intron | 35.0% | |
| GATTTCACTACTTCAAAGCT+TGG | - | chr1_2:13175065-13175084 | Msa0057240:intron | 35.0% | |
| CAGCAATATACAATAGCATC+TGG | - | chr1_2:13175137-13175156 | Msa0057240:intron | 35.0% | |
| GACAGTAAAACACTGCATAA+GGG | + | chr1_2:13175217-13175236 | None:intergenic | 35.0% | |
| TGACAGTAAAACACTGCATA+AGG | + | chr1_2:13175218-13175237 | None:intergenic | 35.0% | |
| AGAATGGAACCCAAAACATT+TGG | - | chr1_2:13175331-13175350 | Msa0057240:intron | 35.0% | |
| AAGTACTCAAAGTTCAACCT+GGG | - | chr1_2:13175360-13175379 | Msa0057240:CDS | 35.0% | |
| TATTCTTGGATGACACCAAT+AGG | + | chr1_2:13175455-13175474 | None:intergenic | 35.0% | |
| ATGATCAGGAGAAGTTGAGA+TGG | + | chr1_2:13173702-13173721 | None:intergenic | 40.0% | |
| ! | TCAAATGTAGCTTGTGGTAG+TGG | - | chr1_2:13173916-13173935 | Msa0057240:three_prime_UTR | 40.0% |
| TCTTACCTCCTCAACTTTAC+TGG | - | chr1_2:13173954-13173973 | Msa0057240:CDS | 40.0% | |
| ATGGACTTCCAGTAAAGTTG+AGG | + | chr1_2:13173965-13173984 | None:intergenic | 40.0% | |
| ! | AGCAGATTAGTGATGGCTTT+TGG | + | chr1_2:13174007-13174026 | None:intergenic | 40.0% |
| GGATATTGGAGTGAAGAGAA+AGG | - | chr1_2:13174612-13174631 | Msa0057240:CDS | 40.0% | |
| GAGTGAAGAGAAAGGAACTT+GGG | - | chr1_2:13174620-13174639 | Msa0057240:CDS | 40.0% | |
| TGTAGATGTTGGAGTCAGAA+AGG | - | chr1_2:13174662-13174681 | Msa0057240:CDS | 40.0% | |
| GTAGATGTTGGAGTCAGAAA+GGG | - | chr1_2:13174663-13174682 | Msa0057240:CDS | 40.0% | |
| GTCAGAAAGGGATACTATGA+AGG | - | chr1_2:13174675-13174694 | Msa0057240:CDS | 40.0% | |
| AGAAAGGGATACTATGAAGG+AGG | - | chr1_2:13174678-13174697 | Msa0057240:CDS | 40.0% | |
| TCTGATGTGAATGTTGGAGT+TGG | - | chr1_2:13174705-13174724 | Msa0057240:CDS | 40.0% | |
| ! | AGCACTCTTCTTTCTGGAAA+AGG | - | chr1_2:13174791-13174810 | Msa0057240:intron | 40.0% |
| ATTGAATTAGCAACTTGGCG+CGG | + | chr1_2:13174885-13174904 | None:intergenic | 40.0% | |
| ! | ACCCTTTTCATCAAACAAGG+TGG | - | chr1_2:13174905-13174924 | Msa0057240:intron | 40.0% |
| TAAAGCTTACTCTGTGCCTT+TGG | - | chr1_2:13175253-13175272 | Msa0057240:intron | 40.0% | |
| GTCACACTGATACATCAGAA+TGG | - | chr1_2:13175315-13175334 | Msa0057240:intron | 40.0% | |
| CAAGTACTCAAAGTTCAACC+TGG | - | chr1_2:13175359-13175378 | Msa0057240:CDS | 40.0% | |
| ATCCAAACAACATGATCCTC+AGG | + | chr1_2:13175410-13175429 | None:intergenic | 40.0% | |
| ATGATCAGGAGAAGTTGAGA+TGG | + | chr1_2:13173702-13173721 | None:intergenic | 40.0% | |
| ! | TCAAATGTAGCTTGTGGTAG+TGG | - | chr1_2:13173916-13173935 | Msa0057240:three_prime_UTR | 40.0% |
| TCTTACCTCCTCAACTTTAC+TGG | - | chr1_2:13173954-13173973 | Msa0057240:CDS | 40.0% | |
| ATGGACTTCCAGTAAAGTTG+AGG | + | chr1_2:13173965-13173984 | None:intergenic | 40.0% | |
| ! | AGCAGATTAGTGATGGCTTT+TGG | + | chr1_2:13174007-13174026 | None:intergenic | 40.0% |
| GGATATTGGAGTGAAGAGAA+AGG | - | chr1_2:13174612-13174631 | Msa0057240:CDS | 40.0% | |
| GAGTGAAGAGAAAGGAACTT+GGG | - | chr1_2:13174620-13174639 | Msa0057240:CDS | 40.0% | |
| TGTAGATGTTGGAGTCAGAA+AGG | - | chr1_2:13174662-13174681 | Msa0057240:CDS | 40.0% | |
| GTAGATGTTGGAGTCAGAAA+GGG | - | chr1_2:13174663-13174682 | Msa0057240:CDS | 40.0% | |
| GTCAGAAAGGGATACTATGA+AGG | - | chr1_2:13174675-13174694 | Msa0057240:CDS | 40.0% | |
| AGAAAGGGATACTATGAAGG+AGG | - | chr1_2:13174678-13174697 | Msa0057240:CDS | 40.0% | |
| TCTGATGTGAATGTTGGAGT+TGG | - | chr1_2:13174705-13174724 | Msa0057240:CDS | 40.0% | |
| ! | AGCACTCTTCTTTCTGGAAA+AGG | - | chr1_2:13174791-13174810 | Msa0057240:intron | 40.0% |
| ATTGAATTAGCAACTTGGCG+CGG | + | chr1_2:13174885-13174904 | None:intergenic | 40.0% | |
| ! | ACCCTTTTCATCAAACAAGG+TGG | - | chr1_2:13174905-13174924 | Msa0057240:intron | 40.0% |
| TAAAGCTTACTCTGTGCCTT+TGG | - | chr1_2:13175253-13175272 | Msa0057240:intron | 40.0% | |
| GTCACACTGATACATCAGAA+TGG | - | chr1_2:13175315-13175334 | Msa0057240:intron | 40.0% | |
| CAAGTACTCAAAGTTCAACC+TGG | - | chr1_2:13175359-13175378 | Msa0057240:CDS | 40.0% | |
| ATCCAAACAACATGATCCTC+AGG | + | chr1_2:13175410-13175429 | None:intergenic | 40.0% | |
| GACTTCCAGTAAAGTTGAGG+AGG | + | chr1_2:13173962-13173981 | None:intergenic | 45.0% | |
| !! | GCTTTTGGCATTGAAGAGGT+GGG | + | chr1_2:13173992-13174011 | None:intergenic | 45.0% |
| !! | GATGGCTTTTGGCATTGAAG+AGG | + | chr1_2:13173996-13174015 | None:intergenic | 45.0% |
| AGGGTGTAGCAGATTAGTGA+TGG | + | chr1_2:13174014-13174033 | None:intergenic | 45.0% | |
| ATCACTAATCTGCTACACCC+TGG | - | chr1_2:13174013-13174032 | Msa0057240:CDS | 45.0% | |
| GGAGTGAAGAGAAAGGAACT+TGG | - | chr1_2:13174619-13174638 | Msa0057240:CDS | 45.0% | |
| TGAAGAGAAAGGAACTTGGG+TGG | - | chr1_2:13174623-13174642 | Msa0057240:CDS | 45.0% | |
| AAAGGAACTTGGGTGGATGT+AGG | - | chr1_2:13174630-13174649 | Msa0057240:CDS | 45.0% | |
| AAGGGATACTATGAAGGAGG+TGG | - | chr1_2:13174681-13174700 | Msa0057240:CDS | 45.0% | |
| CTGGAAAAGGACTTGCATCA+TGG | - | chr1_2:13174804-13174823 | Msa0057240:intron | 45.0% | |
| TTGCTCTTCACACTCACTGA+CGG | + | chr1_2:13174994-13175013 | None:intergenic | 45.0% | |
| TCAGTGAGTGTGAAGAGCAA+GGG | - | chr1_2:13174994-13175013 | Msa0057240:intron | 45.0% | |
| TGTGAAGAGCAAGGGATCAA+AGG | - | chr1_2:13175002-13175021 | Msa0057240:intron | 45.0% | |
| ! | AGCATCTGGAGTGAAGAAGT+TGG | - | chr1_2:13175151-13175170 | Msa0057240:intron | 45.0% |
| ! | GCATCTGGAGTGAAGAAGTT+GGG | - | chr1_2:13175152-13175171 | Msa0057240:intron | 45.0% |
| AAACAACATGATCCTCAGGC+AGG | + | chr1_2:13175406-13175425 | None:intergenic | 45.0% | |
| TGCCTGAGGATCATGTTGTT+TGG | - | chr1_2:13175405-13175424 | Msa0057240:CDS | 45.0% | |
| GACTTCCAGTAAAGTTGAGG+AGG | + | chr1_2:13173962-13173981 | None:intergenic | 45.0% | |
| !! | GCTTTTGGCATTGAAGAGGT+GGG | + | chr1_2:13173992-13174011 | None:intergenic | 45.0% |
| !! | GATGGCTTTTGGCATTGAAG+AGG | + | chr1_2:13173996-13174015 | None:intergenic | 45.0% |
| AGGGTGTAGCAGATTAGTGA+TGG | + | chr1_2:13174014-13174033 | None:intergenic | 45.0% | |
| ATCACTAATCTGCTACACCC+TGG | - | chr1_2:13174013-13174032 | Msa0057240:CDS | 45.0% | |
| GGAGTGAAGAGAAAGGAACT+TGG | - | chr1_2:13174619-13174638 | Msa0057240:CDS | 45.0% | |
| TGAAGAGAAAGGAACTTGGG+TGG | - | chr1_2:13174623-13174642 | Msa0057240:CDS | 45.0% | |
| AAAGGAACTTGGGTGGATGT+AGG | - | chr1_2:13174630-13174649 | Msa0057240:CDS | 45.0% | |
| AAGGGATACTATGAAGGAGG+TGG | - | chr1_2:13174681-13174700 | Msa0057240:CDS | 45.0% | |
| CTGGAAAAGGACTTGCATCA+TGG | - | chr1_2:13174804-13174823 | Msa0057240:intron | 45.0% | |
| TTGCTCTTCACACTCACTGA+CGG | + | chr1_2:13174994-13175013 | None:intergenic | 45.0% | |
| TCAGTGAGTGTGAAGAGCAA+GGG | - | chr1_2:13174994-13175013 | Msa0057240:intron | 45.0% | |
| TGTGAAGAGCAAGGGATCAA+AGG | - | chr1_2:13175002-13175021 | Msa0057240:intron | 45.0% | |
| ! | AGCATCTGGAGTGAAGAAGT+TGG | - | chr1_2:13175151-13175170 | Msa0057240:intron | 45.0% |
| ! | GCATCTGGAGTGAAGAAGTT+GGG | - | chr1_2:13175152-13175171 | Msa0057240:intron | 45.0% |
| AAACAACATGATCCTCAGGC+AGG | + | chr1_2:13175406-13175425 | None:intergenic | 45.0% | |
| TGCCTGAGGATCATGTTGTT+TGG | - | chr1_2:13175405-13175424 | Msa0057240:CDS | 45.0% | |
| CATTGAAGAGGTGGGAAGCA+TGG | + | chr1_2:13173984-13174003 | None:intergenic | 50.0% | |
| !! | GGCTTTTGGCATTGAAGAGG+TGG | + | chr1_2:13173993-13174012 | None:intergenic | 50.0% |
| GGAAGGGGGTCATAGTAATC+AGG | + | chr1_2:13174469-13174488 | None:intergenic | 50.0% | |
| TTAACTCTCCGGGGTCTAAG+GGG | + | chr1_2:13174490-13174509 | None:intergenic | 50.0% | |
| GTTAACTCTCCGGGGTCTAA+GGG | + | chr1_2:13174491-13174510 | None:intergenic | 50.0% | |
| TGTTAACTCTCCGGGGTCTA+AGG | + | chr1_2:13174492-13174511 | None:intergenic | 50.0% | |
| AACTTGGGTGGATGTAGGCA+AGG | - | chr1_2:13174635-13174654 | Msa0057240:CDS | 50.0% | |
| ACTTGGGTGGATGTAGGCAA+GGG | - | chr1_2:13174636-13174655 | Msa0057240:CDS | 50.0% | |
| !! | GGTGGCTCTGATGTGAATGT+TGG | - | chr1_2:13174699-13174718 | Msa0057240:CDS | 50.0% |
| GTCAGTGAGTGTGAAGAGCA+AGG | - | chr1_2:13174993-13175012 | Msa0057240:intron | 50.0% | |
| AGAGCAAGGGATCAAAGGAG+AGG | - | chr1_2:13175007-13175026 | Msa0057240:intron | 50.0% | |
| AGCTTACTCTGTGCCTTTGG+AGG | - | chr1_2:13175256-13175275 | Msa0057240:intron | 50.0% | |
| GCTTACTCTGTGCCTTTGGA+GGG | - | chr1_2:13175257-13175276 | Msa0057240:intron | 50.0% | |
| TGACAAACTGGAACAGTCCC+AGG | + | chr1_2:13175380-13175399 | None:intergenic | 50.0% | |
| CATTGAAGAGGTGGGAAGCA+TGG | + | chr1_2:13173984-13174003 | None:intergenic | 50.0% | |
| !! | GGCTTTTGGCATTGAAGAGG+TGG | + | chr1_2:13173993-13174012 | None:intergenic | 50.0% |
| GGAAGGGGGTCATAGTAATC+AGG | + | chr1_2:13174469-13174488 | None:intergenic | 50.0% | |
| TTAACTCTCCGGGGTCTAAG+GGG | + | chr1_2:13174490-13174509 | None:intergenic | 50.0% | |
| GTTAACTCTCCGGGGTCTAA+GGG | + | chr1_2:13174491-13174510 | None:intergenic | 50.0% | |
| TGTTAACTCTCCGGGGTCTA+AGG | + | chr1_2:13174492-13174511 | None:intergenic | 50.0% | |
| AACTTGGGTGGATGTAGGCA+AGG | - | chr1_2:13174635-13174654 | Msa0057240:CDS | 50.0% | |
| ACTTGGGTGGATGTAGGCAA+GGG | - | chr1_2:13174636-13174655 | Msa0057240:CDS | 50.0% | |
| !! | GGTGGCTCTGATGTGAATGT+TGG | - | chr1_2:13174699-13174718 | Msa0057240:CDS | 50.0% |
| GTCAGTGAGTGTGAAGAGCA+AGG | - | chr1_2:13174993-13175012 | Msa0057240:intron | 50.0% | |
| AGAGCAAGGGATCAAAGGAG+AGG | - | chr1_2:13175007-13175026 | Msa0057240:intron | 50.0% | |
| AGCTTACTCTGTGCCTTTGG+AGG | - | chr1_2:13175256-13175275 | Msa0057240:intron | 50.0% | |
| GCTTACTCTGTGCCTTTGGA+GGG | - | chr1_2:13175257-13175276 | Msa0057240:intron | 50.0% | |
| TGACAAACTGGAACAGTCCC+AGG | + | chr1_2:13175380-13175399 | None:intergenic | 50.0% | |
| GGCAAGGGTGGTGTAGATGT+TGG | - | chr1_2:13174651-13174670 | Msa0057240:CDS | 55.0% | |
| AACTTGGCGCGGCAAGAATG+TGG | + | chr1_2:13174874-13174893 | None:intergenic | 55.0% | |
| CTTCCATCAGCACCCTCCAA+AGG | + | chr1_2:13175272-13175291 | None:intergenic | 55.0% | |
| TCAGGCAGGAGGTGACAAAC+TGG | + | chr1_2:13175392-13175411 | None:intergenic | 55.0% | |
| AGTTTGTCACCTCCTGCCTG+AGG | - | chr1_2:13175391-13175410 | Msa0057240:CDS | 55.0% | |
| CAACATGATCCTCAGGCAGG+AGG | + | chr1_2:13175403-13175422 | None:intergenic | 55.0% | |
| GGCAAGGGTGGTGTAGATGT+TGG | - | chr1_2:13174651-13174670 | Msa0057240:CDS | 55.0% | |
| AACTTGGCGCGGCAAGAATG+TGG | + | chr1_2:13174874-13174893 | None:intergenic | 55.0% | |
| CTTCCATCAGCACCCTCCAA+AGG | + | chr1_2:13175272-13175291 | None:intergenic | 55.0% | |
| TCAGGCAGGAGGTGACAAAC+TGG | + | chr1_2:13175392-13175411 | None:intergenic | 55.0% | |
| AGTTTGTCACCTCCTGCCTG+AGG | - | chr1_2:13175391-13175410 | Msa0057240:CDS | 55.0% | |
| CAACATGATCCTCAGGCAGG+AGG | + | chr1_2:13175403-13175422 | None:intergenic | 55.0% | |
| TCTCCGGGGTCTAAGGGGAA+GGG | + | chr1_2:13174485-13174504 | None:intergenic | 60.0% | |
| TGGGTGGATGTAGGCAAGGG+TGG | - | chr1_2:13174639-13174658 | Msa0057240:CDS | 60.0% | |
| !! | GTGCCTTTGGAGGGTGCTGA+TGG | - | chr1_2:13175266-13175285 | Msa0057240:intron | 60.0% |
| TCTCCGGGGTCTAAGGGGAA+GGG | + | chr1_2:13174485-13174504 | None:intergenic | 60.0% | |
| TGGGTGGATGTAGGCAAGGG+TGG | - | chr1_2:13174639-13174658 | Msa0057240:CDS | 60.0% | |
| !! | GTGCCTTTGGAGGGTGCTGA+TGG | - | chr1_2:13175266-13175285 | Msa0057240:intron | 60.0% |
| ACCCCCTTCCCCTTAGACCC+CGG | - | chr1_2:13174479-13174498 | Msa0057240:CDS | 65.0% | |
| TCCGGGGTCTAAGGGGAAGG+GGG | + | chr1_2:13174483-13174502 | None:intergenic | 65.0% | |
| CTCCGGGGTCTAAGGGGAAG+GGG | + | chr1_2:13174484-13174503 | None:intergenic | 65.0% | |
| CTCTCCGGGGTCTAAGGGGA+AGG | + | chr1_2:13174486-13174505 | None:intergenic | 65.0% | |
| ACCCCCTTCCCCTTAGACCC+CGG | - | chr1_2:13174479-13174498 | Msa0057240:CDS | 65.0% | |
| TCCGGGGTCTAAGGGGAAGG+GGG | + | chr1_2:13174483-13174502 | None:intergenic | 65.0% | |
| CTCCGGGGTCTAAGGGGAAG+GGG | + | chr1_2:13174484-13174503 | None:intergenic | 65.0% | |
| CTCTCCGGGGTCTAAGGGGA+AGG | + | chr1_2:13174486-13174505 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 13173682 | 13175697 | 13173682 | ID=Msa0057240;Name=Msa0057240 |
| chr1_2 | mRNA | 13173682 | 13175697 | 13173682 | ID=Msa0057240-mRNA-1;Parent=Msa0057240;Name=Msa0057240-mRNA-1;_AED=0.02;_eAED=0.02;_QI=104|1|1|1|1|1|3|258|325 |
| chr1_2 | exon | 13173682 | 13174769 | 13173682 | ID=Msa0057240-mRNA-1:exon:5147;Parent=Msa0057240-mRNA-1 |
| chr1_2 | exon | 13175345 | 13175453 | 13175345 | ID=Msa0057240-mRNA-1:exon:5146;Parent=Msa0057240-mRNA-1 |
| chr1_2 | exon | 13175555 | 13175697 | 13175555 | ID=Msa0057240-mRNA-1:exon:5145;Parent=Msa0057240-mRNA-1 |
| chr1_2 | five_prime_UTR | 13175594 | 13175697 | 13175594 | ID=Msa0057240-mRNA-1:five_prime_utr;Parent=Msa0057240-mRNA-1 |
| chr1_2 | CDS | 13175555 | 13175593 | 13175555 | ID=Msa0057240-mRNA-1:cds;Parent=Msa0057240-mRNA-1 |
| chr1_2 | CDS | 13175345 | 13175453 | 13175345 | ID=Msa0057240-mRNA-1:cds;Parent=Msa0057240-mRNA-1 |
| chr1_2 | CDS | 13173940 | 13174769 | 13173940 | ID=Msa0057240-mRNA-1:cds;Parent=Msa0057240-mRNA-1 |
| chr1_2 | three_prime_UTR | 13173682 | 13173939 | 13173682 | ID=Msa0057240-mRNA-1:three_prime_utr;Parent=Msa0057240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
