Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233340 | XP_003593429.1 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 2.68e-78 | 236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233340 | sp|O81831|CARP1_ARATH | 58.824 | 102 | 41 | 1 | 14 | 114 | 19 | 120 | 8.41e-37 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233340 | G7ILC0 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 1.28e-78 | 236 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004870 | Msa0233340 | 0.823629 | 1.249798e-53 | -8.615850e-47 |
| Msa0004880 | Msa0233340 | 0.846941 | 1.582895e-59 | -8.615850e-47 |
| Msa0004920 | Msa0233340 | 0.805862 | 1.087495e-49 | -8.615850e-47 |
| Msa0004930 | Msa0233340 | 0.801369 | 9.303556e-49 | -8.615850e-47 |
| Msa0012440 | Msa0233340 | 0.812249 | 4.661248e-51 | -8.615850e-47 |
| Msa0017510 | Msa0233340 | 0.802150 | 6.431131e-49 | -8.615850e-47 |
| Msa0029910 | Msa0233340 | 0.829815 | 4.166822e-55 | -8.615850e-47 |
| Msa0036430 | Msa0233340 | 0.837882 | 3.999211e-57 | -8.615850e-47 |
| Msa0044100 | Msa0233340 | 0.820724 | 5.897003e-53 | -8.615850e-47 |
| Msa0051770 | Msa0233340 | 0.803373 | 3.594934e-49 | -8.615850e-47 |
| Msa0051780 | Msa0233340 | 0.818571 | 1.828402e-52 | -8.615850e-47 |
| Msa0051790 | Msa0233340 | 0.841826 | 3.754031e-58 | -8.615850e-47 |
| Msa0057240 | Msa0233340 | 0.814030 | 1.896167e-51 | -8.615850e-47 |
| Msa0072370 | Msa0233340 | 0.802084 | 6.636172e-49 | -8.615850e-47 |
| Msa0078430 | Msa0233340 | 0.870669 | 1.225154e-66 | -8.615850e-47 |
| Msa0078650 | Msa0233340 | 0.804078 | 2.567341e-49 | -8.615850e-47 |
| Msa0084500 | Msa0233340 | 0.827411 | 1.587941e-54 | -8.615850e-47 |
| Msa0095540 | Msa0233340 | 0.825046 | 5.801218e-54 | -8.615850e-47 |
| Msa0096000 | Msa0233340 | 0.826775 | 2.254200e-54 | -8.615850e-47 |
| Msa0106790 | Msa0233340 | 0.804594 | 2.003971e-49 | -8.615850e-47 |
| Msa0130570 | Msa0233340 | 0.816099 | 6.585309e-52 | -8.615850e-47 |
| Msa0140780 | Msa0233340 | 0.812788 | 3.554133e-51 | -8.615850e-47 |
| Msa0141100 | Msa0233340 | 0.854811 | 9.597899e-62 | -8.615850e-47 |
| Msa0148340 | Msa0233340 | 0.821427 | 4.060631e-53 | -8.615850e-47 |
| Msa0149560 | Msa0233340 | 0.812424 | 4.269626e-51 | -8.615850e-47 |
| Msa0153420 | Msa0233340 | 0.838500 | 2.771216e-57 | -8.615850e-47 |
| Msa0157290 | Msa0233340 | 0.801593 | 8.369801e-49 | -8.615850e-47 |
| Msa0169920 | Msa0233340 | 0.802442 | 5.600261e-49 | -8.615850e-47 |
| Msa0173090 | Msa0233340 | 0.806028 | 1.003391e-49 | -8.615850e-47 |
| Msa0173990 | Msa0233340 | 0.818007 | 2.453737e-52 | -8.615850e-47 |
| Msa0176470 | Msa0233340 | 0.821032 | 5.009066e-53 | -8.615850e-47 |
| Msa0183750 | Msa0233340 | 0.834937 | 2.245208e-56 | -8.615850e-47 |
| Msa0191040 | Msa0233340 | 0.999968 | 0.000000e+00 | -8.615850e-47 |
| Msa0191250 | Msa0233340 | 0.815259 | 1.013097e-51 | -8.615850e-47 |
| Msa0197930 | Msa0233340 | 0.809734 | 1.634185e-50 | -8.615850e-47 |
| Msa0200260 | Msa0233340 | 0.801917 | 7.180239e-49 | -8.615850e-47 |
| Msa0205850 | Msa0233340 | 0.810881 | 9.243539e-51 | -8.615850e-47 |
| Msa0206800 | Msa0233340 | 0.876634 | 1.194303e-68 | -8.615850e-47 |
| Msa0219190 | Msa0233340 | 0.812122 | 4.969809e-51 | -8.615850e-47 |
| Msa0220300 | Msa0233340 | 0.882918 | 6.960225e-71 | -8.615850e-47 |
| Msa0221090 | Msa0233340 | 0.838039 | 3.644353e-57 | -8.615850e-47 |
| Msa0225600 | Msa0233340 | 0.827135 | 1.848717e-54 | -8.615850e-47 |
| Msa0233340 | Msa0234110 | 0.835304 | 1.813948e-56 | -8.615850e-47 |
| Msa0233340 | Msa0235890 | 0.836883 | 7.207399e-57 | -8.615850e-47 |
| Msa0233340 | Msa0236110 | 0.864262 | 1.380245e-64 | -8.615850e-47 |
| Msa0233340 | Msa0236440 | 0.837062 | 6.486232e-57 | -8.615850e-47 |
| Msa0233340 | Msa0243100 | 0.814300 | 1.652656e-51 | -8.615850e-47 |
| Msa0233340 | Msa0251240 | 0.888352 | 6.370653e-73 | -8.615850e-47 |
| Msa0233340 | Msa0261330 | 0.808113 | 3.632671e-50 | -8.615850e-47 |
| Msa0233340 | Msa0262560 | 0.814219 | 1.722139e-51 | -8.615850e-47 |
| Msa0233340 | Msa0266450 | 0.838257 | 3.201929e-57 | -8.615850e-47 |
| Msa0233340 | Msa0271040 | 0.823202 | 1.572662e-53 | -8.615850e-47 |
| Msa0233340 | Msa0273990 | 0.844268 | 8.398062e-59 | -8.615850e-47 |
| Msa0233340 | Msa0277290 | 0.834561 | 2.792069e-56 | -8.615850e-47 |
| Msa0233340 | Msa0287650 | 0.818817 | 1.608470e-52 | -8.615850e-47 |
| Msa0233340 | Msa0288190 | 0.881010 | 3.423258e-70 | -8.615850e-47 |
| Msa0233340 | Msa0288200 | 0.871818 | 5.114546e-67 | -8.615850e-47 |
| Msa0233340 | Msa0290010 | 0.830262 | 3.242758e-55 | -8.615850e-47 |
| Msa0233340 | Msa0301200 | 0.882194 | 1.277734e-70 | -8.615850e-47 |
| Msa0233340 | Msa0309350 | 0.827598 | 1.432120e-54 | -8.615850e-47 |
| Msa0233340 | Msa0311690 | 0.975788 | 1.337638e-140 | -8.615850e-47 |
| Msa0233340 | Msa0311860 | 0.809561 | 1.780943e-50 | -8.615850e-47 |
| Msa0233340 | Msa0312850 | 0.803161 | 3.977444e-49 | -8.615850e-47 |
| Msa0233340 | Msa0314630 | 0.862900 | 3.652606e-64 | -8.615850e-47 |
| Msa0233340 | Msa0315250 | 0.859249 | 4.713068e-63 | -8.615850e-47 |
| Msa0233340 | Msa0326540 | 0.886877 | 2.331815e-72 | -8.615850e-47 |
| Msa0233340 | Msa0331530 | 0.824220 | 9.081674e-54 | -8.615850e-47 |
| Msa0233340 | Msa0334500 | 0.816776 | 4.644963e-52 | -8.615850e-47 |
| Msa0233340 | Msa0371540 | 0.804948 | 1.690348e-49 | -8.615850e-47 |
| Msa0233340 | Msa0371560 | 0.818358 | 2.043577e-52 | -8.615850e-47 |
| Msa0233340 | Msa0372660 | 0.806381 | 8.456365e-50 | -8.615850e-47 |
| Msa0233340 | Msa0373960 | 0.814313 | 1.641956e-51 | -8.615850e-47 |
| Msa0233340 | Msa0374850 | 0.850933 | 1.232509e-60 | -8.615850e-47 |
| Msa0233340 | Msa0375090 | 0.849912 | 2.384701e-60 | -8.615850e-47 |
| Msa0233340 | Msa0407780 | 0.800403 | 1.464780e-48 | -8.615850e-47 |
| Msa0233340 | Msa0407920 | 0.801135 | 1.038757e-48 | -8.615850e-47 |
| Msa0233340 | Msa0423100 | 0.807978 | 3.880492e-50 | -8.615850e-47 |
| Msa0233340 | Msa0426360 | 0.802490 | 5.472338e-49 | -8.615850e-47 |
| Msa0233340 | Msa0426400 | 0.802274 | 6.064976e-49 | -8.615850e-47 |
| Msa0233340 | Msa0436500 | 0.806292 | 8.827909e-50 | -8.615850e-47 |
| Msa0233340 | Msa0462390 | 0.811589 | 6.491388e-51 | -8.615850e-47 |
| Msa0233340 | Msa0462430 | 0.812418 | 4.282504e-51 | -8.615850e-47 |
| Msa0233340 | Msa0462480 | 0.804653 | 1.948153e-49 | -8.615850e-47 |
| Msa0233340 | Msa0470340 | 0.867580 | 1.232332e-65 | -8.615850e-47 |
| Msa0233340 | Msa0470860 | 0.821709 | 3.495039e-53 | -8.615850e-47 |
| Msa0233340 | Msa0473080 | 0.809646 | 1.707263e-50 | -8.615850e-47 |
| Msa0233340 | Msa0480950 | 0.845114 | 4.970308e-59 | -8.615850e-47 |
| Msa0233340 | Msa0481110 | 0.857059 | 2.112101e-62 | -8.615850e-47 |
| Msa0233340 | Msa0484780 | 0.816141 | 6.443591e-52 | -8.615850e-47 |
| Msa0233340 | Msa0490480 | 0.827543 | 1.476522e-54 | -8.615850e-47 |
| Msa0233340 | Msa0503540 | 0.806423 | 8.286007e-50 | -8.615850e-47 |
| Msa0233340 | Msa0505360 | 0.805591 | 1.239954e-49 | -8.615850e-47 |
| Msa0233340 | Msa0517330 | 0.813773 | 2.160529e-51 | -8.615850e-47 |
| Msa0233340 | Msa0517340 | 0.800761 | 1.238192e-48 | -8.615850e-47 |
| Msa0233340 | Msa0520510 | 0.856992 | 2.210952e-62 | -8.615850e-47 |
| Msa0233340 | Msa0531430 | 0.892475 | 1.534049e-74 | -8.615850e-47 |
| Msa0233340 | Msa0532710 | 0.820186 | 7.836469e-53 | -8.615850e-47 |
| Msa0233340 | Msa0534570 | 0.913037 | 9.778388e-84 | -8.615850e-47 |
| Msa0233340 | Msa0534590 | 0.898876 | 3.451269e-77 | -8.615850e-47 |
| Msa0233340 | Msa0565600 | 0.822207 | 2.680775e-53 | -8.615850e-47 |
| Msa0233340 | Msa0575740 | 0.812148 | 4.903716e-51 | -8.615850e-47 |
| Msa0233340 | Msa0577620 | 0.816040 | 6.789007e-52 | -8.615850e-47 |
| Msa0233340 | Msa0590800 | 0.892893 | 1.042169e-74 | -8.615850e-47 |
| Msa0233340 | Msa0606360 | 0.816769 | 4.662648e-52 | -8.615850e-47 |
| Msa0233340 | Msa0611380 | 0.877362 | 6.676529e-69 | -8.615850e-47 |
| Msa0233340 | Msa0618180 | 0.800925 | 1.146412e-48 | -8.615850e-47 |
| Msa0233340 | Msa0618290 | 0.806704 | 7.229327e-50 | -8.615850e-47 |
| Msa0233340 | Msa0619990 | 0.820867 | 5.467376e-53 | -8.615850e-47 |
| Msa0233340 | Msa0622410 | 0.811063 | 8.442794e-51 | -8.615850e-47 |
| Msa0233340 | Msa0628640 | 0.869107 | 3.966291e-66 | -8.615850e-47 |
| Msa0233340 | Msa0631120 | 0.899354 | 2.154255e-77 | -8.615850e-47 |
| Msa0233340 | Msa0647980 | 0.800975 | 1.119639e-48 | -8.615850e-47 |
| Msa0233340 | Msa0657970 | 0.800649 | 1.305108e-48 | -8.615850e-47 |
| Msa0233340 | Msa0663680 | 0.807710 | 4.424525e-50 | -8.615850e-47 |
| Msa0233340 | Msa0666030 | 0.883693 | 3.615208e-71 | -8.615850e-47 |
| Msa0233340 | Msa0667850 | 0.804555 | 2.042425e-49 | -8.615850e-47 |
| Msa0233340 | Msa0669340 | 0.884230 | 2.289388e-71 | -8.615850e-47 |
| Msa0233340 | Msa0684500 | 0.800365 | 1.491489e-48 | -8.615850e-47 |
| Msa0233340 | Msa0701970 | 0.801792 | 7.619652e-49 | -8.615850e-47 |
| Msa0233340 | Msa0706370 | 0.825255 | 5.180017e-54 | -8.615850e-47 |
| Msa0233340 | Msa0706420 | 0.815716 | 8.017192e-52 | -8.615850e-47 |
| Msa0233340 | Msa0716450 | 0.865424 | 5.965963e-65 | -8.615850e-47 |
| Msa0233340 | Msa0717260 | 0.870276 | 1.648935e-66 | -8.615850e-47 |
| Msa0233340 | Msa0717670 | 0.833328 | 5.680581e-56 | -8.615850e-47 |
| Msa0233340 | Msa0734230 | 0.826673 | 2.384581e-54 | -8.615850e-47 |
| Msa0233340 | Msa0741900 | 0.841665 | 4.140416e-58 | -8.615850e-47 |
| Msa0233340 | Msa0754230 | 0.807740 | 4.360164e-50 | -8.615850e-47 |
| Msa0233340 | Msa0754370 | 0.819066 | 1.411480e-52 | -8.615850e-47 |
| Msa0233340 | Msa0758320 | 0.858038 | 1.083600e-62 | -8.615850e-47 |
| Msa0233340 | Msa0772020 | 0.812776 | 3.575855e-51 | -8.615850e-47 |
| Msa0233340 | Msa0775440 | 0.837321 | 5.570316e-57 | -8.615850e-47 |
| Msa0233340 | Msa0787260 | 0.807526 | 4.842021e-50 | -8.615850e-47 |
| Msa0233340 | Msa0795690 | 0.816638 | 4.988275e-52 | -8.615850e-47 |
| Msa0233340 | Msa0799030 | 0.861955 | 7.128324e-64 | -8.615850e-47 |
| Msa0233340 | Msa0799700 | 0.839518 | 1.510753e-57 | -8.615850e-47 |
| Msa0233340 | Msa0810020 | 0.874852 | 4.886151e-68 | -8.615850e-47 |
| Msa0233340 | Msa0812820 | 0.862853 | 3.775027e-64 | -8.615850e-47 |
| Msa0233340 | Msa0819680 | 0.806466 | 8.114913e-50 | -8.615850e-47 |
| Msa0233340 | Msa0822990 | 0.832428 | 9.508714e-56 | -8.615850e-47 |
| Msa0233340 | Msa0823400 | 0.818205 | 2.213685e-52 | -8.615850e-47 |
| Msa0233340 | Msa0829620 | 0.811455 | 6.940304e-51 | -8.615850e-47 |
| Msa0233340 | Msa0833340 | 0.818507 | 1.890793e-52 | -8.615850e-47 |
| Msa0233340 | Msa0837440 | 0.865392 | 6.105960e-65 | -8.615850e-47 |
| Msa0233340 | Msa0837980 | 0.859070 | 5.334514e-63 | -8.615850e-47 |
| Msa0233340 | Msa0850500 | 0.818010 | 2.450451e-52 | -8.615850e-47 |
| Msa0233340 | Msa0853320 | 0.873128 | 1.869461e-67 | -8.615850e-47 |
| Msa0233340 | Msa0858840 | 0.841723 | 3.996999e-58 | -8.615850e-47 |
| Msa0233340 | Msa0862100 | 0.836424 | 9.434028e-57 | -8.615850e-47 |
| Msa0233340 | Msa0867890 | 0.811890 | 5.581725e-51 | -8.615850e-47 |
| Msa0233340 | Msa0870620 | 0.808377 | 3.191584e-50 | -8.615850e-47 |
| Msa0233340 | Msa0870690 | 0.822668 | 2.094353e-53 | -8.615850e-47 |
| Msa0233340 | Msa0880140 | 0.805846 | 1.095879e-49 | -8.615850e-47 |
| Msa0233340 | Msa0880710 | 0.867750 | 1.086736e-65 | -8.615850e-47 |
| Msa0233340 | Msa0885060 | 0.845378 | 4.214968e-59 | -8.615850e-47 |
| Msa0233340 | Msa0886980 | 0.809079 | 2.258513e-50 | -8.615850e-47 |
| Msa0233340 | Msa0933230 | 0.819062 | 1.414542e-52 | -8.615850e-47 |
| Msa0233340 | Msa0933310 | 0.821247 | 4.468963e-53 | -8.615850e-47 |
| Msa0233340 | Msa0936410 | 0.805615 | 1.225298e-49 | -8.615850e-47 |
| Msa0233340 | Msa0951710 | 0.808781 | 2.616128e-50 | -8.615850e-47 |
| Msa0233340 | Msa0971090 | 0.816848 | 4.475389e-52 | -8.615850e-47 |
| Msa0233340 | Msa0973250 | 0.817143 | 3.841826e-52 | -8.615850e-47 |
| Msa0233340 | Msa0979510 | 0.858887 | 6.048627e-63 | -8.615850e-47 |
| Msa0233340 | Msa0981010 | 0.818721 | 1.690421e-52 | -8.615850e-47 |
| Msa0233340 | Msa1002620 | 0.860720 | 1.696548e-63 | -8.615850e-47 |
| Msa0233340 | Msa1010110 | 0.818968 | 1.485843e-52 | -8.615850e-47 |
| Msa0233340 | Msa1033560 | 0.863891 | 1.800942e-64 | -8.615850e-47 |
| Msa0233340 | Msa1034680 | 0.807883 | 4.065941e-50 | -8.615850e-47 |
| Msa0233340 | Msa1042670 | 0.801954 | 7.056450e-49 | -8.615850e-47 |
| Msa0233340 | Msa1069100 | 0.807960 | 3.915347e-50 | -8.615850e-47 |
| Msa0233340 | Msa1073340 | 0.845792 | 3.254939e-59 | -8.615850e-47 |
| Msa0233340 | Msa1073350 | 0.862116 | 6.364700e-64 | -8.615850e-47 |
| Msa0233340 | Msa1082500 | 0.801022 | 1.095214e-48 | -8.615850e-47 |
| Msa0233340 | Msa1098560 | 0.819197 | 1.317670e-52 | -8.615850e-47 |
| Msa0233340 | Msa1113850 | 0.874616 | 5.876816e-68 | -8.615850e-47 |
| Msa0233340 | Msa1125760 | 0.801803 | 7.577560e-49 | -8.615850e-47 |
| Msa0233340 | Msa1127890 | 0.809922 | 1.489342e-50 | -8.615850e-47 |
| Msa0233340 | Msa1133710 | 0.805858 | 1.089524e-49 | -8.615850e-47 |
| Msa0233340 | Msa1140690 | 0.801067 | 1.072612e-48 | -8.615850e-47 |
| Msa0233340 | Msa1160400 | 0.862570 | 4.614423e-64 | -8.615850e-47 |
| Msa0233340 | Msa1170730 | 0.805564 | 1.256235e-49 | -8.615850e-47 |
| Msa0233340 | Msa1172450 | 0.804037 | 2.618534e-49 | -8.615850e-47 |
| Msa0233340 | Msa1172670 | 0.834884 | 2.314748e-56 | -8.615850e-47 |
| Msa0233340 | Msa1179460 | 0.809162 | 2.168888e-50 | -8.615850e-47 |
| Msa0233340 | Msa1203000 | 0.854034 | 1.610273e-61 | -8.615850e-47 |
| Msa0233340 | Msa1211550 | 0.843106 | 1.718306e-58 | -8.615850e-47 |
| Msa0233340 | Msa1214880 | 0.816434 | 5.542663e-52 | -8.615850e-47 |
| Msa0233340 | Msa1214890 | 0.840581 | 7.977033e-58 | -8.615850e-47 |
| Msa0233340 | Msa1217810 | 0.802666 | 5.034194e-49 | -8.615850e-47 |
| Msa0233340 | Msa1217940 | 0.870684 | 1.211410e-66 | -8.615850e-47 |
| Msa0233340 | Msa1218480 | 0.869801 | 2.358724e-66 | -8.615850e-47 |
| Msa0233340 | Msa1218600 | 0.804326 | 2.279651e-49 | -8.615850e-47 |
| Msa0233340 | Msa1219260 | 0.838185 | 3.340760e-57 | -8.615850e-47 |
| Msa0233340 | Msa1227950 | 0.811062 | 8.448700e-51 | -8.615850e-47 |
| Msa0233340 | Msa1227970 | 0.823177 | 1.594170e-53 | -8.615850e-47 |
| Msa0233340 | Msa1228610 | 0.802170 | 6.368706e-49 | -8.615850e-47 |
| Msa0233340 | Msa1240310 | 0.805463 | 1.318849e-49 | -8.615850e-47 |
| Msa0233340 | Msa1254700 | 0.821462 | 3.986131e-53 | -8.615850e-47 |
| Msa0233340 | Msa1255040 | -0.802219 | 6.224569e-49 | -8.615850e-47 |
| Msa0233340 | Msa1255280 | 0.836632 | 8.349892e-57 | -8.615850e-47 |
| Msa0233340 | Msa1258050 | 0.838433 | 2.883593e-57 | -8.615850e-47 |
| Msa0233340 | Msa1266960 | 0.831944 | 1.252280e-55 | -8.615850e-47 |
| Msa0233340 | Msa1289280 | 0.812955 | 3.266671e-51 | -8.615850e-47 |
| Msa0233340 | Msa1300870 | 0.824082 | 9.788898e-54 | -8.615850e-47 |
| Msa0233340 | Msa1320740 | 0.804985 | 1.660394e-49 | -8.615850e-47 |
| Msa0233340 | Msa1327320 | 0.800229 | 1.589423e-48 | -8.615850e-47 |
| Msa0233340 | Msa1331910 | 0.849139 | 3.915765e-60 | -8.615850e-47 |
| Msa0233340 | Msa1331920 | 0.822113 | 2.818595e-53 | -8.615850e-47 |
| Msa0233340 | Msa1339940 | 0.833978 | 3.909677e-56 | -8.615850e-47 |
| Msa0233340 | Msa1342430 | 0.800928 | 1.144710e-48 | -8.615850e-47 |
| Msa0233340 | Msa1342900 | 0.801824 | 7.502871e-49 | -8.615850e-47 |
| Msa0233340 | Msa1343320 | 0.805777 | 1.133445e-49 | -8.615850e-47 |
| Msa0233340 | Msa1345420 | 0.847501 | 1.110904e-59 | -8.615850e-47 |
| Msa0233340 | Msa1369700 | 0.828051 | 1.114316e-54 | -8.615850e-47 |
| Msa0233340 | Msa1385670 | 0.811712 | 6.103660e-51 | -8.615850e-47 |
| Msa0233340 | Msa1390850 | 0.851934 | 6.421426e-61 | -8.615850e-47 |
| Msa0233340 | Msa1395870 | 0.817923 | 2.563290e-52 | -8.615850e-47 |
| Msa0233340 | Msa1397250 | 0.829438 | 5.148070e-55 | -8.615850e-47 |
| Msa0233340 | Msa1397340 | 0.825114 | 5.593454e-54 | -8.615850e-47 |
| Msa0233340 | Msa1399560 | 0.838310 | 3.103619e-57 | -8.615850e-47 |
| Msa0233340 | Msa1401150 | 0.837939 | 3.866549e-57 | -8.615850e-47 |
| Msa0233340 | Msa1403970 | 0.811927 | 5.478955e-51 | -8.615850e-47 |
| Msa0233340 | Msa1405180 | 0.805170 | 1.519235e-49 | -8.615850e-47 |
| Msa0233340 | Msa1420060 | 0.827318 | 1.671652e-54 | -8.615850e-47 |
| Msa0233340 | Msa1423450 | 0.805203 | 1.495035e-49 | -8.615850e-47 |
| Msa0233340 | Msa1425010 | 0.807874 | 4.084376e-50 | -8.615850e-47 |
| Msa0233340 | Msa1429420 | 0.811186 | 7.938583e-51 | -8.615850e-47 |
| Msa0233340 | Msa1437190 | 0.837942 | 3.858174e-57 | -8.615850e-47 |
| Msa0233340 | Msa1440340 | 0.868626 | 5.679458e-66 | -8.615850e-47 |
| Msa0233340 | Msa1442590 | 0.807169 | 5.764754e-50 | -8.615850e-47 |
| Msa0233340 | Msa1442630 | 0.813747 | 2.189109e-51 | -8.615850e-47 |
| Msa0233340 | Msa1443840 | 0.840748 | 7.215207e-58 | -8.615850e-47 |
| Msa0233340 | Msa1449730 | 0.805354 | 1.390270e-49 | -8.615850e-47 |
| Msa0233340 | Msa1452060 | 0.834559 | 2.795103e-56 | -8.615850e-47 |
| Msa0233340 | Msa1458910 | 0.803511 | 3.367259e-49 | -8.615850e-47 |
| Msa0233340 | Msa1460380 | 0.844223 | 8.638111e-59 | -8.615850e-47 |
| Msa0233340 | Msa1460890 | 0.823054 | 1.703172e-53 | -8.615850e-47 |
| Msa0233340 | Msa1463670 | 0.825280 | 5.109976e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233340 | MtrunA17_Chr2g0280881 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 2.47e-82 | 236 |
| Msa0233340 | MtrunA17_Chr2g0323211 | 64.151 | 106 | 38 | 0 | 9 | 114 | 5 | 110 | 8.65e-44 | 139 |
| Msa0233340 | MtrunA17_Chr2g0318861 | 59.649 | 114 | 42 | 1 | 1 | 114 | 1 | 110 | 1.71e-40 | 130 |
| Msa0233340 | MtrunA17_Chr8g0361421 | 59.091 | 110 | 45 | 0 | 5 | 114 | 2 | 111 | 2.75e-39 | 127 |
| Msa0233340 | MtrunA17_Chr2g0318791 | 61.905 | 105 | 33 | 2 | 14 | 118 | 9 | 106 | 2.51e-38 | 125 |
| Msa0233340 | MtrunA17_Chr4g0023231 | 59.406 | 101 | 41 | 0 | 14 | 114 | 6 | 106 | 2.52e-38 | 125 |
| Msa0233340 | MtrunA17_Chr2g0318761 | 65.957 | 94 | 31 | 1 | 14 | 107 | 5 | 97 | 4.30e-38 | 124 |
| Msa0233340 | MtrunA17_Chr2g0318801 | 63.830 | 94 | 33 | 1 | 14 | 107 | 9 | 101 | 7.75e-36 | 119 |
| Msa0233340 | MtrunA17_Chr8g0346481 | 56.436 | 101 | 44 | 0 | 14 | 114 | 19 | 119 | 1.21e-35 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0233340 | AT4G27280.1 | 58.824 | 102 | 41 | 1 | 14 | 114 | 19 | 120 | 8.55e-38 | 124 |
| Msa0233340 | AT5G54490.1 | 55.882 | 102 | 44 | 1 | 14 | 114 | 19 | 120 | 1.15e-35 | 119 |
| Msa0233340 | AT2G46600.1 | 52.475 | 101 | 48 | 0 | 14 | 114 | 22 | 122 | 4.54e-34 | 115 |
Find 26 sgRNAs with CRISPR-Local
Find 32 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCAATGATGGAGAAAT+TGG | 0.086263 | 2_2:+5677931 | Msa0233340:CDS |
| AACCGATCCACCATTCTTCT+TGG | 0.251298 | 2_2:-5677891 | None:intergenic |
| GAGTGACTCTAAGCAACTTT+TGG | 0.324838 | 2_2:+5678186 | Msa0233340:CDS |
| CCCAATTTCTCCATCATTGA+AGG | 0.334569 | 2_2:-5677932 | None:intergenic |
| CCTTCAATGATGGAGAAATT+GGG | 0.434103 | 2_2:+5677932 | Msa0233340:CDS |
| AAACTCTGCATTGCTTGGGT+TGG | 0.475429 | 2_2:+5678045 | Msa0233340:CDS |
| CTAAGAGAAGGTGATATTGA+TGG | 0.479725 | 2_2:+5678100 | Msa0233340:CDS |
| GGGAAGTGAAGGGTTTATGA+AGG | 0.496833 | 2_2:+5677952 | Msa0233340:CDS |
| TCTGCATTGCTTGGGTTGGA+AGG | 0.497566 | 2_2:+5678049 | Msa0233340:CDS |
| GGACTACTTCCCTTCAATGA+TGG | 0.499786 | 2_2:+5677922 | Msa0233340:CDS |
| TTTATGAAGGAGTTGGCAAA+TGG | 0.508232 | 2_2:+5677965 | Msa0233340:CDS |
| TAAGAGAAGGTGATATTGAT+GGG | 0.513310 | 2_2:+5678101 | Msa0233340:CDS |
| GAAGGTGATATTGATGGGGA+TGG | 0.523087 | 2_2:+5678106 | Msa0233340:CDS |
| TGAAGGGTTTATGAAGGAGT+TGG | 0.524979 | 2_2:+5677958 | Msa0233340:CDS |
| CCAATTTCTCCATCATTGAA+GGG | 0.539401 | 2_2:-5677931 | None:intergenic |
| ATGGAGAAATTGGGAAGTGA+AGG | 0.543176 | 2_2:+5677941 | Msa0233340:CDS |
| GCGTCGAGTTCCAAGAAGAA+TGG | 0.562292 | 2_2:+5677881 | Msa0233340:CDS |
| GGATGGAGCTCTTAATGAGA+TGG | 0.581359 | 2_2:+5678123 | Msa0233340:CDS |
| TGGAGAAATTGGGAAGTGAA+GGG | 0.582244 | 2_2:+5677942 | Msa0233340:CDS |
| TTAGAGTCACTCATCAAAGC+AGG | 0.587443 | 2_2:-5678175 | None:intergenic |
| TTCCAAGAAGAATGGTGGAT+CGG | 0.596507 | 2_2:+5677889 | Msa0233340:CDS |
| CAGGACTCAACCTAAACATG+AGG | 0.616612 | 2_2:-5678156 | None:intergenic |
| ATTACTTGCATGCTAAGAGA+AGG | 0.617118 | 2_2:+5678088 | Msa0233340:CDS |
| TCGAGTTCCAAGAAGAATGG+TGG | 0.624651 | 2_2:+5677884 | Msa0233340:CDS |
| AAGAGAAGGTGATATTGATG+GGG | 0.671155 | 2_2:+5678102 | Msa0233340:CDS |
| AGGACTCAACCTAAACATGA+GGG | 0.684724 | 2_2:-5678155 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGGTTTTAATGTGTTGA+TGG | + | chr2_2:5677982-5678001 | Msa0233340:CDS | 25.0% |
| TAAGAGAAGGTGATATTGAT+GGG | + | chr2_2:5678101-5678120 | Msa0233340:CDS | 30.0% | |
| CCAATTTCTCCATCATTGAA+GGG | - | chr2_2:5677934-5677953 | None:intergenic | 35.0% | |
| ! | CCTTCAATGATGGAGAAATT+GGG | + | chr2_2:5677932-5677951 | Msa0233340:CDS | 35.0% |
| TTTATGAAGGAGTTGGCAAA+TGG | + | chr2_2:5677965-5677984 | Msa0233340:CDS | 35.0% | |
| AAGAAAAACTCTGCATTGCT+TGG | + | chr2_2:5678040-5678059 | Msa0233340:CDS | 35.0% | |
| AGAAAAACTCTGCATTGCTT+GGG | + | chr2_2:5678041-5678060 | Msa0233340:CDS | 35.0% | |
| ATTACTTGCATGCTAAGAGA+AGG | + | chr2_2:5678088-5678107 | Msa0233340:CDS | 35.0% | |
| CTAAGAGAAGGTGATATTGA+TGG | + | chr2_2:5678100-5678119 | Msa0233340:CDS | 35.0% | |
| AAGAGAAGGTGATATTGATG+GGG | + | chr2_2:5678102-5678121 | Msa0233340:CDS | 35.0% | |
| !! | TTGGAAGAAGCTATTTTCAC+TGG | + | chr2_2:5678205-5678224 | Msa0233340:CDS | 35.0% |
| !! | TTCCAAGAAGAATGGTGGAT+CGG | + | chr2_2:5677889-5677908 | Msa0233340:CDS | 40.0% |
| ! | CCCTTCAATGATGGAGAAAT+TGG | + | chr2_2:5677931-5677950 | Msa0233340:CDS | 40.0% |
| CCCAATTTCTCCATCATTGA+AGG | - | chr2_2:5677935-5677954 | None:intergenic | 40.0% | |
| ATGGAGAAATTGGGAAGTGA+AGG | + | chr2_2:5677941-5677960 | Msa0233340:CDS | 40.0% | |
| TGGAGAAATTGGGAAGTGAA+GGG | + | chr2_2:5677942-5677961 | Msa0233340:CDS | 40.0% | |
| TGAAGGGTTTATGAAGGAGT+TGG | + | chr2_2:5677958-5677977 | Msa0233340:CDS | 40.0% | |
| ! | AGTTTTGCACCCTCATGTTT+AGG | + | chr2_2:5678146-5678165 | Msa0233340:CDS | 40.0% |
| AGGACTCAACCTAAACATGA+GGG | - | chr2_2:5678158-5678177 | None:intergenic | 40.0% | |
| TTAGAGTCACTCATCAAAGC+AGG | - | chr2_2:5678178-5678197 | None:intergenic | 40.0% | |
| ! | GAGTGACTCTAAGCAACTTT+TGG | + | chr2_2:5678186-5678205 | Msa0233340:CDS | 40.0% |
| TCGAGTTCCAAGAAGAATGG+TGG | + | chr2_2:5677884-5677903 | Msa0233340:CDS | 45.0% | |
| AACCGATCCACCATTCTTCT+TGG | - | chr2_2:5677894-5677913 | None:intergenic | 45.0% | |
| !!! | TGGTGGATCGGTTGTTTTTG+AGG | + | chr2_2:5677901-5677920 | Msa0233340:CDS | 45.0% |
| GGACTACTTCCCTTCAATGA+TGG | + | chr2_2:5677922-5677941 | Msa0233340:CDS | 45.0% | |
| GGGAAGTGAAGGGTTTATGA+AGG | + | chr2_2:5677952-5677971 | Msa0233340:CDS | 45.0% | |
| AAACTCTGCATTGCTTGGGT+TGG | + | chr2_2:5678045-5678064 | Msa0233340:CDS | 45.0% | |
| GAAGGTGATATTGATGGGGA+TGG | + | chr2_2:5678106-5678125 | Msa0233340:CDS | 45.0% | |
| GGATGGAGCTCTTAATGAGA+TGG | + | chr2_2:5678123-5678142 | Msa0233340:CDS | 45.0% | |
| CAGGACTCAACCTAAACATG+AGG | - | chr2_2:5678159-5678178 | None:intergenic | 45.0% | |
| GCGTCGAGTTCCAAGAAGAA+TGG | + | chr2_2:5677881-5677900 | Msa0233340:CDS | 50.0% | |
| !! | TCTGCATTGCTTGGGTTGGA+AGG | + | chr2_2:5678049-5678068 | Msa0233340:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 5677878 | 5678234 | 5677878 | ID=Msa0233340;Name=Msa0233340 |
| chr2_2 | mRNA | 5677878 | 5678234 | 5677878 | ID=Msa0233340-mRNA-1;Parent=Msa0233340;Name=Msa0233340-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|118 |
| chr2_2 | exon | 5677878 | 5678234 | 5677878 | ID=Msa0233340-mRNA-1:exon:2428;Parent=Msa0233340-mRNA-1 |
| chr2_2 | CDS | 5677878 | 5678234 | 5677878 | ID=Msa0233340-mRNA-1:cds;Parent=Msa0233340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
