Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191040 | XP_003593429.1 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 2.68e-78 | 236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191040 | sp|O81831|CARP1_ARATH | 58.824 | 102 | 41 | 1 | 14 | 114 | 19 | 120 | 8.41e-37 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191040 | G7ILC0 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 1.28e-78 | 236 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004870 | Msa0191040 | 0.822477 | 2.319875e-53 | -8.615850e-47 |
| Msa0004880 | Msa0191040 | 0.846390 | 2.238327e-59 | -8.615850e-47 |
| Msa0004920 | Msa0191040 | 0.805975 | 1.029404e-49 | -8.615850e-47 |
| Msa0004930 | Msa0191040 | 0.801167 | 1.023038e-48 | -8.615850e-47 |
| Msa0012440 | Msa0191040 | 0.811646 | 6.307938e-51 | -8.615850e-47 |
| Msa0017510 | Msa0191040 | 0.802424 | 5.648494e-49 | -8.615850e-47 |
| Msa0029910 | Msa0191040 | 0.830184 | 3.386977e-55 | -8.615850e-47 |
| Msa0036430 | Msa0191040 | 0.838049 | 3.622037e-57 | -8.615850e-47 |
| Msa0044100 | Msa0191040 | 0.820679 | 6.037267e-53 | -8.615850e-47 |
| Msa0051770 | Msa0191040 | 0.803483 | 3.412562e-49 | -8.615850e-47 |
| Msa0051780 | Msa0191040 | 0.817438 | 3.297385e-52 | -8.615850e-47 |
| Msa0051790 | Msa0191040 | 0.841301 | 5.163822e-58 | -8.615850e-47 |
| Msa0057240 | Msa0191040 | 0.813476 | 2.510753e-51 | -8.615850e-47 |
| Msa0072370 | Msa0191040 | 0.802340 | 5.876206e-49 | -8.615850e-47 |
| Msa0078430 | Msa0191040 | 0.870700 | 1.196747e-66 | -8.615850e-47 |
| Msa0078650 | Msa0191040 | 0.804108 | 2.531008e-49 | -8.615850e-47 |
| Msa0084500 | Msa0191040 | 0.827625 | 1.410995e-54 | -8.615850e-47 |
| Msa0095540 | Msa0191040 | 0.825113 | 5.594405e-54 | -8.615850e-47 |
| Msa0096000 | Msa0191040 | 0.827008 | 1.982913e-54 | -8.615850e-47 |
| Msa0106790 | Msa0191040 | 0.805163 | 1.524069e-49 | -8.615850e-47 |
| Msa0130570 | Msa0191040 | 0.816323 | 5.868992e-52 | -8.615850e-47 |
| Msa0140780 | Msa0191040 | 0.813192 | 2.898474e-51 | -8.615850e-47 |
| Msa0141100 | Msa0191040 | 0.854857 | 9.306786e-62 | -8.615850e-47 |
| Msa0148340 | Msa0191040 | 0.820914 | 5.331226e-53 | -8.615850e-47 |
| Msa0149560 | Msa0191040 | 0.811873 | 5.631872e-51 | -8.615850e-47 |
| Msa0153420 | Msa0191040 | 0.838899 | 2.186348e-57 | -8.615850e-47 |
| Msa0157290 | Msa0191040 | 0.801865 | 7.359451e-49 | -8.615850e-47 |
| Msa0169920 | Msa0191040 | 0.802727 | 4.889739e-49 | -8.615850e-47 |
| Msa0173090 | Msa0191040 | 0.806215 | 9.167546e-50 | -8.615850e-47 |
| Msa0173990 | Msa0191040 | 0.818390 | 2.010051e-52 | -8.615850e-47 |
| Msa0176470 | Msa0191040 | 0.821390 | 4.142587e-53 | -8.615850e-47 |
| Msa0183750 | Msa0191040 | 0.834774 | 2.468054e-56 | -8.615850e-47 |
| Msa0191040 | Msa0191250 | 0.815272 | 1.006507e-51 | -8.615850e-47 |
| Msa0191040 | Msa0197930 | 0.809777 | 1.600042e-50 | -8.615850e-47 |
| Msa0191040 | Msa0200260 | 0.802342 | 5.872001e-49 | -8.615850e-47 |
| Msa0191040 | Msa0205850 | 0.810615 | 1.055498e-50 | -8.615850e-47 |
| Msa0191040 | Msa0206800 | 0.876764 | 1.077453e-68 | -8.615850e-47 |
| Msa0191040 | Msa0219190 | 0.812179 | 4.828748e-51 | -8.615850e-47 |
| Msa0191040 | Msa0220300 | 0.882802 | 7.675485e-71 | -8.615850e-47 |
| Msa0191040 | Msa0221090 | 0.837987 | 3.758274e-57 | -8.615850e-47 |
| Msa0191040 | Msa0225600 | 0.826806 | 2.216858e-54 | -8.615850e-47 |
| Msa0191040 | Msa0233340 | 0.999968 | 0.000000e+00 | -8.615850e-47 |
| Msa0191040 | Msa0234110 | 0.835636 | 1.495630e-56 | -8.615850e-47 |
| Msa0191040 | Msa0235890 | 0.837184 | 6.035976e-57 | -8.615850e-47 |
| Msa0191040 | Msa0236110 | 0.864741 | 9.772393e-65 | -8.615850e-47 |
| Msa0191040 | Msa0236440 | 0.836475 | 9.157560e-57 | -8.615850e-47 |
| Msa0191040 | Msa0243100 | 0.814962 | 1.179310e-51 | -8.615850e-47 |
| Msa0191040 | Msa0251240 | 0.887935 | 9.210751e-73 | -8.615850e-47 |
| Msa0191040 | Msa0261330 | 0.808129 | 3.604954e-50 | -8.615850e-47 |
| Msa0191040 | Msa0262560 | 0.814537 | 1.465057e-51 | -8.615850e-47 |
| Msa0191040 | Msa0266450 | 0.837850 | 4.074023e-57 | -8.615850e-47 |
| Msa0191040 | Msa0271040 | 0.822570 | 2.207732e-53 | -8.615850e-47 |
| Msa0191040 | Msa0273990 | 0.844746 | 6.246882e-59 | -8.615850e-47 |
| Msa0191040 | Msa0277290 | 0.835111 | 2.029484e-56 | -8.615850e-47 |
| Msa0191040 | Msa0287650 | 0.819258 | 1.276572e-52 | -8.615850e-47 |
| Msa0191040 | Msa0288190 | 0.881193 | 2.942469e-70 | -8.615850e-47 |
| Msa0191040 | Msa0288200 | 0.872027 | 4.357297e-67 | -8.615850e-47 |
| Msa0191040 | Msa0290010 | 0.829516 | 4.926403e-55 | -8.615850e-47 |
| Msa0191040 | Msa0301200 | 0.882568 | 9.338069e-71 | -8.615850e-47 |
| Msa0191040 | Msa0309350 | 0.826985 | 2.008627e-54 | -8.615850e-47 |
| Msa0191040 | Msa0311690 | 0.975791 | 1.319311e-140 | -8.615850e-47 |
| Msa0191040 | Msa0311860 | 0.809905 | 1.501835e-50 | -8.615850e-47 |
| Msa0191040 | Msa0312850 | 0.803114 | 4.067375e-49 | -8.615850e-47 |
| Msa0191040 | Msa0314630 | 0.863361 | 2.630132e-64 | -8.615850e-47 |
| Msa0191040 | Msa0315250 | 0.858988 | 5.641395e-63 | -8.615850e-47 |
| Msa0191040 | Msa0326540 | 0.886987 | 2.118176e-72 | -8.615850e-47 |
| Msa0191040 | Msa0331530 | 0.824660 | 7.154866e-54 | -8.615850e-47 |
| Msa0191040 | Msa0334500 | 0.817032 | 4.069548e-52 | -8.615850e-47 |
| Msa0191040 | Msa0371540 | 0.804708 | 1.897065e-49 | -8.615850e-47 |
| Msa0191040 | Msa0371560 | 0.817767 | 2.779881e-52 | -8.615850e-47 |
| Msa0191040 | Msa0372660 | 0.806103 | 9.675726e-50 | -8.615850e-47 |
| Msa0191040 | Msa0373960 | 0.815203 | 1.042652e-51 | -8.615850e-47 |
| Msa0191040 | Msa0374850 | 0.850980 | 1.195131e-60 | -8.615850e-47 |
| Msa0191040 | Msa0375090 | 0.849921 | 2.371074e-60 | -8.615850e-47 |
| Msa0191040 | Msa0407920 | 0.801104 | 1.053796e-48 | -8.615850e-47 |
| Msa0191040 | Msa0423100 | 0.808788 | 2.607781e-50 | -8.615850e-47 |
| Msa0191040 | Msa0426360 | 0.802262 | 6.097650e-49 | -8.615850e-47 |
| Msa0191040 | Msa0426400 | 0.802057 | 6.720936e-49 | -8.615850e-47 |
| Msa0191040 | Msa0436500 | 0.806791 | 6.927522e-50 | -8.615850e-47 |
| Msa0191040 | Msa0462390 | 0.811745 | 6.003982e-51 | -8.615850e-47 |
| Msa0191040 | Msa0462430 | 0.812562 | 3.982077e-51 | -8.615850e-47 |
| Msa0191040 | Msa0462480 | 0.804745 | 1.863788e-49 | -8.615850e-47 |
| Msa0191040 | Msa0470340 | 0.867472 | 1.334344e-65 | -8.615850e-47 |
| Msa0191040 | Msa0470860 | 0.821434 | 4.046099e-53 | -8.615850e-47 |
| Msa0191040 | Msa0473080 | 0.809455 | 1.876647e-50 | -8.615850e-47 |
| Msa0191040 | Msa0480950 | 0.845230 | 4.622927e-59 | -8.615850e-47 |
| Msa0191040 | Msa0481110 | 0.857395 | 1.680566e-62 | -8.615850e-47 |
| Msa0191040 | Msa0484780 | 0.815788 | 7.727347e-52 | -8.615850e-47 |
| Msa0191040 | Msa0490480 | 0.828026 | 1.130073e-54 | -8.615850e-47 |
| Msa0191040 | Msa0503540 | 0.806080 | 9.785624e-50 | -8.615850e-47 |
| Msa0191040 | Msa0505360 | 0.805718 | 1.165822e-49 | -8.615850e-47 |
| Msa0191040 | Msa0517330 | 0.813774 | 2.158971e-51 | -8.615850e-47 |
| Msa0191040 | Msa0517340 | 0.800512 | 1.391821e-48 | -8.615850e-47 |
| Msa0191040 | Msa0520510 | 0.857513 | 1.550813e-62 | -8.615850e-47 |
| Msa0191040 | Msa0531430 | 0.892417 | 1.617754e-74 | -8.615850e-47 |
| Msa0191040 | Msa0532710 | 0.819851 | 9.346334e-53 | -8.615850e-47 |
| Msa0191040 | Msa0534570 | 0.913047 | 9.670028e-84 | -8.615850e-47 |
| Msa0191040 | Msa0534590 | 0.898773 | 3.817677e-77 | -8.615850e-47 |
| Msa0191040 | Msa0565600 | 0.821854 | 3.236167e-53 | -8.615850e-47 |
| Msa0191040 | Msa0575740 | 0.812412 | 4.296022e-51 | -8.615850e-47 |
| Msa0191040 | Msa0577620 | 0.816328 | 5.853044e-52 | -8.615850e-47 |
| Msa0191040 | Msa0590800 | 0.892893 | 1.042169e-74 | -8.615850e-47 |
| Msa0191040 | Msa0606360 | 0.816368 | 5.734078e-52 | -8.615850e-47 |
| Msa0191040 | Msa0611380 | 0.877034 | 8.683924e-69 | -8.615850e-47 |
| Msa0191040 | Msa0618180 | 0.800720 | 1.262337e-48 | -8.615850e-47 |
| Msa0191040 | Msa0618290 | 0.806366 | 8.516691e-50 | -8.615850e-47 |
| Msa0191040 | Msa0619990 | 0.821119 | 4.782398e-53 | -8.615850e-47 |
| Msa0191040 | Msa0622410 | 0.811687 | 6.181865e-51 | -8.615850e-47 |
| Msa0191040 | Msa0625890 | 0.800181 | 1.625591e-48 | -8.615850e-47 |
| Msa0191040 | Msa0628640 | 0.868983 | 4.350186e-66 | -8.615850e-47 |
| Msa0191040 | Msa0631120 | 0.899378 | 2.103013e-77 | -8.615850e-47 |
| Msa0191040 | Msa0647980 | 0.800861 | 1.181742e-48 | -8.615850e-47 |
| Msa0191040 | Msa0657970 | 0.800463 | 1.424662e-48 | -8.615850e-47 |
| Msa0191040 | Msa0663680 | 0.808157 | 3.554417e-50 | -8.615850e-47 |
| Msa0191040 | Msa0666030 | 0.883283 | 5.115320e-71 | -8.615850e-47 |
| Msa0191040 | Msa0667850 | 0.805506 | 1.291570e-49 | -8.615850e-47 |
| Msa0191040 | Msa0669340 | 0.884239 | 2.271647e-71 | -8.615850e-47 |
| Msa0191040 | Msa0684500 | 0.800292 | 1.543464e-48 | -8.615850e-47 |
| Msa0191040 | Msa0701970 | 0.801402 | 9.157247e-49 | -8.615850e-47 |
| Msa0191040 | Msa0706370 | 0.824974 | 6.033947e-54 | -8.615850e-47 |
| Msa0191040 | Msa0706420 | 0.816124 | 6.500061e-52 | -8.615850e-47 |
| Msa0191040 | Msa0716450 | 0.865427 | 5.953126e-65 | -8.615850e-47 |
| Msa0191040 | Msa0717260 | 0.870251 | 1.680855e-66 | -8.615850e-47 |
| Msa0191040 | Msa0717670 | 0.833003 | 6.844841e-56 | -8.615850e-47 |
| Msa0191040 | Msa0734230 | 0.826487 | 2.641433e-54 | -8.615850e-47 |
| Msa0191040 | Msa0741900 | 0.842018 | 3.341197e-58 | -8.615850e-47 |
| Msa0191040 | Msa0754230 | 0.807892 | 4.048297e-50 | -8.615850e-47 |
| Msa0191040 | Msa0754370 | 0.819094 | 1.391058e-52 | -8.615850e-47 |
| Msa0191040 | Msa0758320 | 0.857927 | 1.169393e-62 | -8.615850e-47 |
| Msa0191040 | Msa0772020 | 0.813061 | 3.096329e-51 | -8.615850e-47 |
| Msa0191040 | Msa0775440 | 0.836992 | 6.760234e-57 | -8.615850e-47 |
| Msa0191040 | Msa0787260 | 0.807833 | 4.165956e-50 | -8.615850e-47 |
| Msa0191040 | Msa0795690 | 0.816857 | 4.453771e-52 | -8.615850e-47 |
| Msa0191040 | Msa0795960 | 0.800012 | 1.759307e-48 | -8.615850e-47 |
| Msa0191040 | Msa0799030 | 0.861901 | 7.406428e-64 | -8.615850e-47 |
| Msa0191040 | Msa0799700 | 0.839291 | 1.729663e-57 | -8.615850e-47 |
| Msa0191040 | Msa0810020 | 0.874987 | 4.393795e-68 | -8.615850e-47 |
| Msa0191040 | Msa0812820 | 0.862611 | 4.482003e-64 | -8.615850e-47 |
| Msa0191040 | Msa0819680 | 0.806708 | 7.214947e-50 | -8.615850e-47 |
| Msa0191040 | Msa0822990 | 0.832748 | 7.918721e-56 | -8.615850e-47 |
| Msa0191040 | Msa0823400 | 0.818786 | 1.634282e-52 | -8.615850e-47 |
| Msa0191040 | Msa0829620 | 0.811513 | 6.741515e-51 | -8.615850e-47 |
| Msa0191040 | Msa0833340 | 0.818722 | 1.689598e-52 | -8.615850e-47 |
| Msa0191040 | Msa0837440 | 0.865364 | 6.231389e-65 | -8.615850e-47 |
| Msa0191040 | Msa0837980 | 0.859050 | 5.406029e-63 | -8.615850e-47 |
| Msa0191040 | Msa0850500 | 0.818380 | 2.020340e-52 | -8.615850e-47 |
| Msa0191040 | Msa0853320 | 0.872918 | 2.197336e-67 | -8.615850e-47 |
| Msa0191040 | Msa0858840 | 0.841948 | 3.486328e-58 | -8.615850e-47 |
| Msa0191040 | Msa0862100 | 0.836800 | 7.567517e-57 | -8.615850e-47 |
| Msa0191040 | Msa0867890 | 0.811987 | 5.318377e-51 | -8.615850e-47 |
| Msa0191040 | Msa0870620 | 0.808239 | 3.414568e-50 | -8.615850e-47 |
| Msa0191040 | Msa0870690 | 0.822320 | 2.523575e-53 | -8.615850e-47 |
| Msa0191040 | Msa0880140 | 0.806125 | 9.572643e-50 | -8.615850e-47 |
| Msa0191040 | Msa0880710 | 0.867462 | 1.344250e-65 | -8.615850e-47 |
| Msa0191040 | Msa0885060 | 0.845659 | 3.538061e-59 | -8.615850e-47 |
| Msa0191040 | Msa0886980 | 0.809304 | 2.022047e-50 | -8.615850e-47 |
| Msa0191040 | Msa0933230 | 0.818841 | 1.588050e-52 | -8.615850e-47 |
| Msa0191040 | Msa0933310 | 0.821013 | 5.059156e-53 | -8.615850e-47 |
| Msa0191040 | Msa0936410 | 0.806000 | 1.017419e-49 | -8.615850e-47 |
| Msa0191040 | Msa0951710 | 0.809098 | 2.238285e-50 | -8.615850e-47 |
| Msa0191040 | Msa0971090 | 0.816631 | 5.005501e-52 | -8.615850e-47 |
| Msa0191040 | Msa0973250 | 0.817545 | 3.120286e-52 | -8.615850e-47 |
| Msa0191040 | Msa0979510 | 0.858952 | 5.785283e-63 | -8.615850e-47 |
| Msa0191040 | Msa0981010 | 0.819005 | 1.457501e-52 | -8.615850e-47 |
| Msa0191040 | Msa1002620 | 0.860647 | 1.784979e-63 | -8.615850e-47 |
| Msa0191040 | Msa1010110 | 0.819204 | 1.313110e-52 | -8.615850e-47 |
| Msa0191040 | Msa1033560 | 0.864044 | 1.613375e-64 | -8.615850e-47 |
| Msa0191040 | Msa1034680 | 0.808052 | 3.742504e-50 | -8.615850e-47 |
| Msa0191040 | Msa1042670 | 0.802368 | 5.800471e-49 | -8.615850e-47 |
| Msa0191040 | Msa1069100 | 0.808097 | 3.660409e-50 | -8.615850e-47 |
| Msa0191040 | Msa1073340 | 0.846191 | 2.535913e-59 | -8.615850e-47 |
| Msa0191040 | Msa1073350 | 0.861541 | 9.542479e-64 | -8.615850e-47 |
| Msa0191040 | Msa1082500 | 0.800876 | 1.173293e-48 | -8.615850e-47 |
| Msa0191040 | Msa1098560 | 0.819504 | 1.121943e-52 | -8.615850e-47 |
| Msa0191040 | Msa1113850 | 0.874846 | 4.905923e-68 | -8.615850e-47 |
| Msa0191040 | Msa1125760 | 0.801973 | 6.992039e-49 | -8.615850e-47 |
| Msa0191040 | Msa1127890 | 0.810229 | 1.278620e-50 | -8.615850e-47 |
| Msa0191040 | Msa1133710 | 0.806041 | 9.972439e-50 | -8.615850e-47 |
| Msa0191040 | Msa1140690 | 0.801205 | 1.005158e-48 | -8.615850e-47 |
| Msa0191040 | Msa1160400 | 0.862579 | 4.584405e-64 | -8.615850e-47 |
| Msa0191040 | Msa1170730 | 0.805419 | 1.347041e-49 | -8.615850e-47 |
| Msa0191040 | Msa1172450 | 0.804232 | 2.384003e-49 | -8.615850e-47 |
| Msa0191040 | Msa1172670 | 0.834525 | 2.850404e-56 | -8.615850e-47 |
| Msa0191040 | Msa1179460 | 0.808757 | 2.648078e-50 | -8.615850e-47 |
| Msa0191040 | Msa1179520 | 0.800180 | 1.626369e-48 | -8.615850e-47 |
| Msa0191040 | Msa1203000 | 0.854056 | 1.587154e-61 | -8.615850e-47 |
| Msa0191040 | Msa1211550 | 0.843324 | 1.502563e-58 | -8.615850e-47 |
| Msa0191040 | Msa1214880 | 0.816463 | 5.458301e-52 | -8.615850e-47 |
| Msa0191040 | Msa1214890 | 0.840804 | 6.975274e-58 | -8.615850e-47 |
| Msa0191040 | Msa1217810 | 0.802216 | 6.234135e-49 | -8.615850e-47 |
| Msa0191040 | Msa1217940 | 0.870858 | 1.061689e-66 | -8.615850e-47 |
| Msa0191040 | Msa1218480 | 0.869490 | 2.978065e-66 | -8.615850e-47 |
| Msa0191040 | Msa1218600 | 0.804460 | 2.137065e-49 | -8.615850e-47 |
| Msa0191040 | Msa1219260 | 0.838026 | 3.672649e-57 | -8.615850e-47 |
| Msa0191040 | Msa1227950 | 0.811359 | 7.284537e-51 | -8.615850e-47 |
| Msa0191040 | Msa1227970 | 0.823523 | 1.323360e-53 | -8.615850e-47 |
| Msa0191040 | Msa1228610 | 0.802533 | 5.363866e-49 | -8.615850e-47 |
| Msa0191040 | Msa1240310 | 0.805667 | 1.195002e-49 | -8.615850e-47 |
| Msa0191040 | Msa1254700 | 0.821425 | 4.065278e-53 | -8.615850e-47 |
| Msa0191040 | Msa1255040 | -0.802363 | 5.812381e-49 | -8.615850e-47 |
| Msa0191040 | Msa1255280 | 0.836741 | 7.835109e-57 | -8.615850e-47 |
| Msa0191040 | Msa1258050 | 0.838555 | 2.682723e-57 | -8.615850e-47 |
| Msa0191040 | Msa1266960 | 0.831786 | 1.369902e-55 | -8.615850e-47 |
| Msa0191040 | Msa1289280 | 0.812693 | 3.729587e-51 | -8.615850e-47 |
| Msa0191040 | Msa1300870 | 0.823856 | 1.105556e-53 | -8.615850e-47 |
| Msa0191040 | Msa1320740 | 0.805225 | 1.479464e-49 | -8.615850e-47 |
| Msa0191040 | Msa1327320 | 0.800511 | 1.392572e-48 | -8.615850e-47 |
| Msa0191040 | Msa1331910 | 0.849346 | 3.429561e-60 | -8.615850e-47 |
| Msa0191040 | Msa1331920 | 0.822009 | 2.978556e-53 | -8.615850e-47 |
| Msa0191040 | Msa1339940 | 0.834234 | 3.372206e-56 | -8.615850e-47 |
| Msa0191040 | Msa1342430 | 0.801345 | 9.406236e-49 | -8.615850e-47 |
| Msa0191040 | Msa1342900 | 0.801938 | 7.111231e-49 | -8.615850e-47 |
| Msa0191040 | Msa1343320 | 0.805171 | 1.518392e-49 | -8.615850e-47 |
| Msa0191040 | Msa1345420 | 0.848034 | 7.926751e-60 | -8.615850e-47 |
| Msa0191040 | Msa1369700 | 0.828095 | 1.087458e-54 | -8.615850e-47 |
| Msa0191040 | Msa1385670 | 0.811723 | 6.069099e-51 | -8.615850e-47 |
| Msa0191040 | Msa1390850 | 0.852124 | 5.671726e-61 | -8.615850e-47 |
| Msa0191040 | Msa1395870 | 0.817819 | 2.705361e-52 | -8.615850e-47 |
| Msa0191040 | Msa1397250 | 0.829115 | 6.166377e-55 | -8.615850e-47 |
| Msa0191040 | Msa1397340 | 0.824512 | 7.753813e-54 | -8.615850e-47 |
| Msa0191040 | Msa1399560 | 0.838169 | 3.373617e-57 | -8.615850e-47 |
| Msa0191040 | Msa1401150 | 0.837747 | 4.329882e-57 | -8.615850e-47 |
| Msa0191040 | Msa1403970 | 0.811924 | 5.487415e-51 | -8.615850e-47 |
| Msa0191040 | Msa1405180 | 0.805297 | 1.428999e-49 | -8.615850e-47 |
| Msa0191040 | Msa1420060 | 0.827406 | 1.591999e-54 | -8.615850e-47 |
| Msa0191040 | Msa1423450 | 0.804633 | 1.967422e-49 | -8.615850e-47 |
| Msa0191040 | Msa1425010 | 0.808035 | 3.773550e-50 | -8.615850e-47 |
| Msa0191040 | Msa1429420 | 0.810648 | 1.038334e-50 | -8.615850e-47 |
| Msa0191040 | Msa1437190 | 0.837861 | 4.048983e-57 | -8.615850e-47 |
| Msa0191040 | Msa1440340 | 0.868013 | 8.951298e-66 | -8.615850e-47 |
| Msa0191040 | Msa1442590 | 0.807626 | 4.609999e-50 | -8.615850e-47 |
| Msa0191040 | Msa1442630 | 0.814320 | 1.635930e-51 | -8.615850e-47 |
| Msa0191040 | Msa1443840 | 0.840617 | 7.808267e-58 | -8.615850e-47 |
| Msa0191040 | Msa1449730 | 0.805374 | 1.376782e-49 | -8.615850e-47 |
| Msa0191040 | Msa1452060 | 0.834793 | 2.440748e-56 | -8.615850e-47 |
| Msa0191040 | Msa1458910 | 0.804302 | 2.305848e-49 | -8.615850e-47 |
| Msa0191040 | Msa1460380 | 0.844283 | 8.321566e-59 | -8.615850e-47 |
| Msa0191040 | Msa1460890 | 0.822840 | 1.910397e-53 | -8.615850e-47 |
| Msa0191040 | Msa1463670 | 0.825361 | 4.887546e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191040 | MtrunA17_Chr2g0280881 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 2.47e-82 | 236 |
| Msa0191040 | MtrunA17_Chr2g0323211 | 64.151 | 106 | 38 | 0 | 9 | 114 | 5 | 110 | 8.65e-44 | 139 |
| Msa0191040 | MtrunA17_Chr2g0318861 | 59.649 | 114 | 42 | 1 | 1 | 114 | 1 | 110 | 1.71e-40 | 130 |
| Msa0191040 | MtrunA17_Chr8g0361421 | 59.091 | 110 | 45 | 0 | 5 | 114 | 2 | 111 | 2.75e-39 | 127 |
| Msa0191040 | MtrunA17_Chr2g0318791 | 61.905 | 105 | 33 | 2 | 14 | 118 | 9 | 106 | 2.51e-38 | 125 |
| Msa0191040 | MtrunA17_Chr4g0023231 | 59.406 | 101 | 41 | 0 | 14 | 114 | 6 | 106 | 2.52e-38 | 125 |
| Msa0191040 | MtrunA17_Chr2g0318761 | 65.957 | 94 | 31 | 1 | 14 | 107 | 5 | 97 | 4.30e-38 | 124 |
| Msa0191040 | MtrunA17_Chr2g0318801 | 63.830 | 94 | 33 | 1 | 14 | 107 | 9 | 101 | 7.75e-36 | 119 |
| Msa0191040 | MtrunA17_Chr8g0346481 | 56.436 | 101 | 44 | 0 | 14 | 114 | 19 | 119 | 1.21e-35 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191040 | AT4G27280.1 | 58.824 | 102 | 41 | 1 | 14 | 114 | 19 | 120 | 8.55e-38 | 124 |
| Msa0191040 | AT5G54490.1 | 55.882 | 102 | 44 | 1 | 14 | 114 | 19 | 120 | 1.15e-35 | 119 |
| Msa0191040 | AT2G46600.1 | 52.475 | 101 | 48 | 0 | 14 | 114 | 22 | 122 | 4.54e-34 | 115 |
Find 26 sgRNAs with CRISPR-Local
Find 32 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCAATGATGGAGAAAT+TGG | 0.086263 | 2_1:+6567237 | Msa0191040:CDS |
| AACCGATCCACCATTCTTCT+TGG | 0.251298 | 2_1:-6567197 | None:intergenic |
| GAGTGACTCTAAGCAACTTT+TGG | 0.324838 | 2_1:+6567492 | Msa0191040:CDS |
| CCCAATTTCTCCATCATTGA+AGG | 0.334569 | 2_1:-6567238 | None:intergenic |
| CCTTCAATGATGGAGAAATT+GGG | 0.434103 | 2_1:+6567238 | Msa0191040:CDS |
| AAACTCTGCATTGCTTGGGT+TGG | 0.475429 | 2_1:+6567351 | Msa0191040:CDS |
| CTAAGAGAAGGTGATATTGA+TGG | 0.479725 | 2_1:+6567406 | Msa0191040:CDS |
| GGGAAGTGAAGGGTTTATGA+AGG | 0.496833 | 2_1:+6567258 | Msa0191040:CDS |
| TCTGCATTGCTTGGGTTGGA+AGG | 0.497566 | 2_1:+6567355 | Msa0191040:CDS |
| GGACTACTTCCCTTCAATGA+TGG | 0.499786 | 2_1:+6567228 | Msa0191040:CDS |
| TTTATGAAGGAGTTGGCAAA+TGG | 0.508232 | 2_1:+6567271 | Msa0191040:CDS |
| TAAGAGAAGGTGATATTGAT+GGG | 0.513310 | 2_1:+6567407 | Msa0191040:CDS |
| GAAGGTGATATTGATGGGGA+TGG | 0.523087 | 2_1:+6567412 | Msa0191040:CDS |
| TGAAGGGTTTATGAAGGAGT+TGG | 0.524979 | 2_1:+6567264 | Msa0191040:CDS |
| CCAATTTCTCCATCATTGAA+GGG | 0.539401 | 2_1:-6567237 | None:intergenic |
| ATGGAGAAATTGGGAAGTGA+AGG | 0.543176 | 2_1:+6567247 | Msa0191040:CDS |
| GCGTCGAGTTCCAAGAAGAA+TGG | 0.562292 | 2_1:+6567187 | Msa0191040:CDS |
| GGATGGAGCTCTTAATGAGA+TGG | 0.581359 | 2_1:+6567429 | Msa0191040:CDS |
| TGGAGAAATTGGGAAGTGAA+GGG | 0.582244 | 2_1:+6567248 | Msa0191040:CDS |
| TTAGAGTCACTCATCAAAGC+AGG | 0.587443 | 2_1:-6567481 | None:intergenic |
| TTCCAAGAAGAATGGTGGAT+CGG | 0.596507 | 2_1:+6567195 | Msa0191040:CDS |
| CAGGACTCAACCTAAACATG+AGG | 0.616612 | 2_1:-6567462 | None:intergenic |
| ATTACTTGCATGCTAAGAGA+AGG | 0.617118 | 2_1:+6567394 | Msa0191040:CDS |
| TCGAGTTCCAAGAAGAATGG+TGG | 0.624651 | 2_1:+6567190 | Msa0191040:CDS |
| AAGAGAAGGTGATATTGATG+GGG | 0.671155 | 2_1:+6567408 | Msa0191040:CDS |
| AGGACTCAACCTAAACATGA+GGG | 0.684724 | 2_1:-6567461 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGGTTTTAATGTGTTGA+TGG | + | chr2_1:6567288-6567307 | Msa0191040:CDS | 25.0% |
| TAAGAGAAGGTGATATTGAT+GGG | + | chr2_1:6567407-6567426 | Msa0191040:CDS | 30.0% | |
| CCAATTTCTCCATCATTGAA+GGG | - | chr2_1:6567240-6567259 | None:intergenic | 35.0% | |
| ! | CCTTCAATGATGGAGAAATT+GGG | + | chr2_1:6567238-6567257 | Msa0191040:CDS | 35.0% |
| TTTATGAAGGAGTTGGCAAA+TGG | + | chr2_1:6567271-6567290 | Msa0191040:CDS | 35.0% | |
| AAGAAAAACTCTGCATTGCT+TGG | + | chr2_1:6567346-6567365 | Msa0191040:CDS | 35.0% | |
| AGAAAAACTCTGCATTGCTT+GGG | + | chr2_1:6567347-6567366 | Msa0191040:CDS | 35.0% | |
| ATTACTTGCATGCTAAGAGA+AGG | + | chr2_1:6567394-6567413 | Msa0191040:CDS | 35.0% | |
| CTAAGAGAAGGTGATATTGA+TGG | + | chr2_1:6567406-6567425 | Msa0191040:CDS | 35.0% | |
| AAGAGAAGGTGATATTGATG+GGG | + | chr2_1:6567408-6567427 | Msa0191040:CDS | 35.0% | |
| !! | TTGGAAGAAGCTATTTTCAC+TGG | + | chr2_1:6567511-6567530 | Msa0191040:CDS | 35.0% |
| !! | TTCCAAGAAGAATGGTGGAT+CGG | + | chr2_1:6567195-6567214 | Msa0191040:CDS | 40.0% |
| ! | CCCTTCAATGATGGAGAAAT+TGG | + | chr2_1:6567237-6567256 | Msa0191040:CDS | 40.0% |
| CCCAATTTCTCCATCATTGA+AGG | - | chr2_1:6567241-6567260 | None:intergenic | 40.0% | |
| ATGGAGAAATTGGGAAGTGA+AGG | + | chr2_1:6567247-6567266 | Msa0191040:CDS | 40.0% | |
| TGGAGAAATTGGGAAGTGAA+GGG | + | chr2_1:6567248-6567267 | Msa0191040:CDS | 40.0% | |
| TGAAGGGTTTATGAAGGAGT+TGG | + | chr2_1:6567264-6567283 | Msa0191040:CDS | 40.0% | |
| ! | AGTTTTGCACCCTCATGTTT+AGG | + | chr2_1:6567452-6567471 | Msa0191040:CDS | 40.0% |
| AGGACTCAACCTAAACATGA+GGG | - | chr2_1:6567464-6567483 | None:intergenic | 40.0% | |
| TTAGAGTCACTCATCAAAGC+AGG | - | chr2_1:6567484-6567503 | None:intergenic | 40.0% | |
| ! | GAGTGACTCTAAGCAACTTT+TGG | + | chr2_1:6567492-6567511 | Msa0191040:CDS | 40.0% |
| TCGAGTTCCAAGAAGAATGG+TGG | + | chr2_1:6567190-6567209 | Msa0191040:CDS | 45.0% | |
| AACCGATCCACCATTCTTCT+TGG | - | chr2_1:6567200-6567219 | None:intergenic | 45.0% | |
| !!! | TGGTGGATCGGTTGTTTTTG+AGG | + | chr2_1:6567207-6567226 | Msa0191040:CDS | 45.0% |
| GGACTACTTCCCTTCAATGA+TGG | + | chr2_1:6567228-6567247 | Msa0191040:CDS | 45.0% | |
| GGGAAGTGAAGGGTTTATGA+AGG | + | chr2_1:6567258-6567277 | Msa0191040:CDS | 45.0% | |
| AAACTCTGCATTGCTTGGGT+TGG | + | chr2_1:6567351-6567370 | Msa0191040:CDS | 45.0% | |
| GAAGGTGATATTGATGGGGA+TGG | + | chr2_1:6567412-6567431 | Msa0191040:CDS | 45.0% | |
| GGATGGAGCTCTTAATGAGA+TGG | + | chr2_1:6567429-6567448 | Msa0191040:CDS | 45.0% | |
| CAGGACTCAACCTAAACATG+AGG | - | chr2_1:6567465-6567484 | None:intergenic | 45.0% | |
| GCGTCGAGTTCCAAGAAGAA+TGG | + | chr2_1:6567187-6567206 | Msa0191040:CDS | 50.0% | |
| !! | TCTGCATTGCTTGGGTTGGA+AGG | + | chr2_1:6567355-6567374 | Msa0191040:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 6567184 | 6567540 | 6567184 | ID=Msa0191040;Name=Msa0191040 |
| chr2_1 | mRNA | 6567184 | 6567540 | 6567184 | ID=Msa0191040-mRNA-1;Parent=Msa0191040;Name=Msa0191040-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|118 |
| chr2_1 | exon | 6567184 | 6567540 | 6567184 | ID=Msa0191040-mRNA-1:exon:2937;Parent=Msa0191040-mRNA-1 |
| chr2_1 | CDS | 6567184 | 6567540 | 6567184 | ID=Msa0191040-mRNA-1:cds;Parent=Msa0191040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
