AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0537950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0537950 MtrunA17_Chr4g0012861 96.004 901 16 4 1 882 1 900 0.0 1773
Msa0537950 MtrunA17_Chr3g0107701 47.556 900 405 13 19 868 16 898 0.0 782
Msa0537950 MtrunA17_Chr5g0432721 42.823 829 389 12 1 796 1 777 0.0 601
Msa0537950 MtrunA17_Chr2g0281191 51.801 583 213 13 257 820 310 843 3.20e-179 540
Msa0537950 MtrunA17_Chr2g0281191 43.411 129 56 2 4 132 29 140 1.56e-26 117
Msa0537950 MtrunA17_Chr7g0244871 68.478 92 29 0 293 384 6 97 1.43e-40 144
Msa0537950 MtrunA17_Chr7g0251891 37.838 111 68 1 299 408 16 126 2.38e-19 87.4
Msa0537950 MtrunA17_Chr7g0237841 35.714 98 62 1 299 395 623 720 9.27e-15 79.0
Msa0537950 MtrunA17_Chr1g0178071 36.090 133 65 6 280 399 54 179 1.35e-14 76.3
Msa0537950 MtrunA17_Chr8g0345771 37.273 110 61 4 299 402 171 278 2.39e-14 77.0
Msa0537950 MtrunA17_Chr7g0276471 40.659 91 49 3 299 386 117 205 6.33e-14 75.1
Msa0537950 MtrunA17_Chr7g0266821 39.252 107 58 5 304 406 65 168 6.18e-13 70.5
Msa0537950 MtrunA17_Chr7g0244881 39.640 111 61 2 187 291 3 113 5.85e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0537950 AT4G32010.2 50.236 846 309 17 1 833 1 747 0.0 784
Msa0537950 AT4G32010.1 50.000 850 309 18 1 833 1 751 0.0 778
Msa0537950 AT2G30470.1 51.503 765 307 17 1 746 6 725 0.0 706
Msa0537950 AT4G21550.3 35.172 580 280 13 3 551 14 528 3.55e-95 310
Msa0537950 AT4G21550.2 34.397 564 275 12 3 536 14 512 1.20e-89 295
Msa0537950 AT4G21550.1 35.345 580 280 12 3 552 14 528 1.38e-89 300
Msa0537950 AT4G21550.1 37.795 127 57 3 668 793 550 655 4.44e-12 70.5
Msa0537950 AT3G26790.1 39.450 109 65 1 299 406 91 199 7.29e-20 92.0
Msa0537950 AT5G06250.4 32.948 173 95 5 299 452 45 215 9.33e-17 82.0
Msa0537950 AT5G06250.2 32.948 173 95 5 299 452 45 215 1.00e-16 82.0
Msa0537950 AT5G06250.5 32.948 173 95 5 299 452 45 215 1.01e-16 81.6
Msa0537950 AT1G13260.1 40.000 110 59 5 299 403 187 294 1.70e-15 79.3
Msa0537950 AT3G24650.1 37.931 116 70 2 299 412 571 686 2.01e-15 81.3
Msa0537950 AT1G28300.1 40.741 108 60 3 279 383 149 255 3.02e-15 79.0
Msa0537950 AT2G36080.4 39.815 108 56 4 299 399 37 142 3.35e-15 74.7
Msa0537950 AT2G36080.2 39.815 108 56 4 299 399 37 142 3.35e-15 74.7
Msa0537950 AT2G36080.3 39.815 108 56 4 299 399 37 142 4.46e-15 76.3
Msa0537950 AT2G36080.1 39.815 108 56 4 299 399 37 142 4.55e-15 76.3
Msa0537950 AT5G06250.3 36.923 130 56 5 299 404 45 172 4.90e-15 76.6
Msa0537950 AT5G06250.1 33.103 145 81 4 299 429 45 187 5.27e-15 76.6
Msa0537950 AT4G01500.1 38.261 115 59 4 282 386 9 121 2.48e-14 75.9
Msa0537950 AT1G68840.2 43.011 93 46 4 299 386 187 277 3.66e-14 75.5
Msa0537950 AT1G68840.1 43.011 93 46 4 299 386 187 277 3.66e-14 75.5
Msa0537950 AT2G46870.1 39.560 91 50 3 299 386 34 122 7.69e-14 73.9
Msa0537950 AT3G11580.4 36.207 116 57 4 299 399 28 141 5.90e-13 69.7
Msa0537950 AT3G11580.2 36.207 116 57 4 299 399 28 141 5.90e-13 69.7
Msa0537950 AT3G11580.5 36.207 116 57 4 299 399 28 141 5.90e-13 69.7
Msa0537950 AT1G01030.2 40.659 91 49 3 299 386 55 143 6.60e-13 71.2
Msa0537950 AT1G01030.1 40.659 91 49 3 299 386 55 143 8.62e-13 71.2
Msa0537950 AT3G11580.3 36.207 116 57 4 299 399 28 141 3.80e-12 69.3
Msa0537950 AT3G11580.1 36.207 116 57 4 299 399 28 141 3.82e-12 68.2

Find 282 sgRNAs with CRISPR-Local

Find 566 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGTTTCAATTTAGATTT+TGG 0.133418 4_1:-17027626 Msa0537950:CDS
TACATCCTGCTATTATTATT+TGG 0.167699 4_1:+17027603 None:intergenic
CAACTCTTGATCTGTAATTC+TGG 0.172835 4_1:+17028088 None:intergenic
TTACCCTCTGTTGGAGAATT+TGG 0.188202 4_1:-17028464 Msa0537950:CDS
AACGGTTACCGGAGAGAAAA+TGG 0.205781 4_1:+17031487 None:intergenic
CGAGCGAGTTGCGGTGGTTT+TGG 0.215530 4_1:+17031394 None:intergenic
GCATACCCCTCACATTTAAT+TGG 0.234093 4_1:+17028585 None:intergenic
TGACTTTAGAGTAATGTAAA+AGG 0.237204 4_1:+17023698 None:intergenic
AAGAAAAGAACTCGAAATAT+TGG 0.272591 4_1:-17026578 Msa0537950:CDS
AAAATTACAGGAGGTTTGTT+TGG 0.274922 4_1:-17023644 Msa0537950:three_prime_UTR
GGACGTGTATGGAGAACTTT+TGG 0.278484 4_1:-17025688 Msa0537950:CDS
TCAAGTGAAACTTCCTATTC+TGG 0.278901 4_1:-17026797 Msa0537950:CDS
CCAACAGAGGGTAAAACTTC+TGG 0.283471 4_1:+17028473 None:intergenic
ATTACTTCAGCACATGCTTT+TGG 0.292122 4_1:+17027828 None:intergenic
CCTATATTAAGTGGTTATTC+TGG 0.299020 4_1:-17026758 Msa0537950:CDS
TGCGTAAGCTATAAAATTAC+AGG 0.302650 4_1:-17023656 Msa0537950:three_prime_UTR
CAAACCTCACAATGTTGATT+TGG 0.320944 4_1:-17028519 Msa0537950:CDS
AAGCGTGTGCATGCAGAATA+AGG 0.324375 4_1:+17031556 None:intergenic
ATCAGTTGCTTCCGCGATAT+TGG 0.327434 4_1:-17028112 Msa0537950:CDS
ATTCAGGAGCCTCCTGTGTT+TGG 0.329853 4_1:-17025969 Msa0537950:intron
TGTGGAATTGAAGTTGAAAA+TGG 0.332556 4_1:-17031191 Msa0537950:exon
TGAACGGAGGAGAAGAAGTT+AGG 0.335477 4_1:+17031452 None:intergenic
CAACTGCAAGCTGGCGATAC+TGG 0.336996 4_1:-17027543 Msa0537950:intron
TCTTGCCCACTATTCTCTTC+AGG 0.340208 4_1:+17023773 None:intergenic
TGCCCTTCCCACTTGGTGGC+TGG 0.342375 4_1:+17024317 None:intergenic
ACAACACTTGGCTTAACTTC+TGG 0.343319 4_1:+17026464 None:intergenic
CCCTGAGGGGAAACTTATAA+TGG 0.343393 4_1:-17026961 Msa0537950:CDS
AGAGTTGGCCTAGGAGGTTT+AGG 0.345670 4_1:+17028215 None:intergenic
TTCCCTTGGATTCAATTCAT+TGG 0.348370 4_1:+17025555 None:intergenic
GTTCCGGTCACAGTTGGTTA+TGG 0.348632 4_1:+17031345 None:intergenic
CACTGGAGCTGAAACTTACT+TGG 0.350730 4_1:-17026517 Msa0537950:CDS
AATGAAAAGCCTAATGAATC+TGG 0.351647 4_1:-17028659 Msa0537950:CDS
ACTTTCTAGAGAGCGCATTT+AGG 0.352085 4_1:+17026699 None:intergenic
TCAAGAGTTGCAGCAAATAT+CGG 0.354064 4_1:-17028075 Msa0537950:CDS
CGACATTTAACTCCAGTTGA+TGG 0.354939 4_1:-17024127 Msa0537950:CDS
TTTGCTGTTCCAGATTCATT+AGG 0.360782 4_1:+17028650 None:intergenic
TTACTTGAATCTAATTCATT+TGG 0.362360 4_1:+17024082 None:intergenic
TTGTCTTCCCTCACTCTCAT+TGG 0.362735 4_1:+17023844 None:intergenic
TGGAGATAAGGCGGCGGCGG+TGG 0.370879 4_1:+17031365 None:intergenic
ATGTGAGGGGTATGCAAGTT+GGG 0.375012 4_1:-17028577 Msa0537950:CDS
CAGCATCAGCCACTTGGTCT+TGG 0.376062 4_1:+17024059 None:intergenic
CGGAAGTTTGAGGGAAGTTC+CGG 0.376643 4_1:+17031329 None:intergenic
TCCCTTGGATTCAATTCATT+GGG 0.378007 4_1:+17025556 None:intergenic
AGGACATTATGAAAGGGATT+TGG 0.378577 4_1:+17028308 None:intergenic
TTAGCAAATGCTGCGGTACT+TGG 0.380392 4_1:-17024430 Msa0537950:CDS
GTCTACTTCTGATTCATCCT+TGG 0.381182 4_1:+17024159 None:intergenic
AGGCCCTCAGGTTGAGAGAT+AGG 0.381204 4_1:+17027684 None:intergenic
AAATTACAGGAGGTTTGTTT+GGG 0.383291 4_1:-17023643 Msa0537950:three_prime_UTR
ATTACCTGTGCAAGTACTTC+AGG 0.390989 4_1:-17029171 Msa0537950:CDS
ATATTTGTGGTACGATCTAC+TGG 0.393389 4_1:-17025936 Msa0537950:CDS
TGGCCTTCTTCAGTCTCAAA+AGG 0.396098 4_1:-17026738 Msa0537950:CDS
TAAGGCGGCGGCGGTGGTGG+CGG 0.397381 4_1:+17031371 None:intergenic
GCTCTGGATCGTGAATCTTC+TGG 0.398177 4_1:-17024463 Msa0537950:CDS
ACTTACTTGGGAAGAGGCTC+AGG 0.399619 4_1:-17026504 Msa0537950:CDS
GTCATCATGCTCAGAGTGTT+TGG 0.401168 4_1:+17023980 None:intergenic
AGATAAGGCGGCGGCGGTGG+TGG 0.402541 4_1:+17031368 None:intergenic
GGAAACTTATAATGGGGTTC+AGG 0.403096 4_1:-17026953 Msa0537950:CDS
TTCCTTCCTCGTCCTTCGGC+AGG 0.411704 4_1:+17028134 None:intergenic
CCAGAATAACCACTTAATAT+AGG 0.414414 4_1:+17026758 None:intergenic
TCTGGTTTGATTTCTCTAGA+AGG 0.414545 4_1:+17028491 None:intergenic
ACTCTATCTCCAGGCTTAGA+AGG 0.416607 4_1:-17028197 Msa0537950:CDS
TGAATTGAATCCAAGGGAAC+TGG 0.417947 4_1:-17025551 Msa0537950:CDS
CGGAACTTCCCTCAAACTTC+CGG 0.418455 4_1:-17031328 Msa0537950:five_prime_UTR
TCATTCTCCGAACCATCAAC+TGG 0.418732 4_1:+17024115 None:intergenic
AGAAAAGAACTCGAAATATT+GGG 0.421447 4_1:-17026577 Msa0537950:CDS
TATAGCTATTATATGTATAG+TGG 0.423994 4_1:+17023578 None:intergenic
TGCTTCTGCAGTTCATGAAC+AGG 0.426089 4_1:-17023804 Msa0537950:CDS
CTTGAATTGCCAACCGGATC+GGG 0.426831 4_1:-17024020 Msa0537950:CDS
GGGAATTATGCAGAAAATGA+TGG 0.428592 4_1:-17028557 Msa0537950:CDS
TCTCCATACACGTCCACTTA+GGG 0.429073 4_1:+17025696 None:intergenic
AACTCTTGATCTGTAATTCT+GGG 0.432750 4_1:+17028089 None:intergenic
AATGTCACCTCCACTTCTAT+TGG 0.433907 4_1:-17028261 Msa0537950:CDS
GCTTGCATGTCTTCCCGATC+CGG 0.434187 4_1:+17024007 None:intergenic
ATGTTCCATGCAAAAGAATC+TGG 0.435693 4_1:-17029382 Msa0537950:CDS
CCTGTGTTTCCTTCTAAGCC+TGG 0.440594 4_1:+17028188 None:intergenic
CCTTGGCAGCATCAGCCACT+TGG 0.441564 4_1:+17024053 None:intergenic
ATTCTCATAAACACCAGAAT+AGG 0.444115 4_1:+17026784 None:intergenic
TTCACTTGAATGAGAACCAT+TGG 0.445941 4_1:+17026811 None:intergenic
TAATGTCCTTGTTGATGAAA+GGG 0.448219 4_1:-17028294 Msa0537950:CDS
CACGATCCAGAGCTGGCCTC+TGG 0.448625 4_1:+17024473 None:intergenic
TTCTTCTCAGGAACCAGCAC+AGG 0.450915 4_1:+17026596 None:intergenic
GGCAAGCCAGAGGCCAGCTC+TGG 0.450969 4_1:-17024479 Msa0537950:CDS
CCCATTATAAGTTTCCCCTC+AGG 0.451841 4_1:+17026960 None:intergenic
GACTTTAGAGTAATGTAAAA+GGG 0.452325 4_1:+17023699 None:intergenic
AAAATGATGGGATGAGGTAC+TGG 0.452920 4_1:-17028544 Msa0537950:CDS
TGCTGGTCGAATTGGTCGCT+TGG 0.454425 4_1:-17027856 Msa0537950:CDS
AATGTGAGGGGTATGCAAGT+TGG 0.455328 4_1:-17028578 Msa0537950:CDS
CTGATTCCTTCCTCGTCCTT+CGG 0.456088 4_1:+17028130 None:intergenic
TTTAACTCCAGTTGATGGTT+CGG 0.456293 4_1:-17024122 Msa0537950:CDS
CGGAGGAGAAGAAGTTAGGA+AGG 0.456972 4_1:+17031456 None:intergenic
AAAAGATTATCCAGTTCCCT+TGG 0.457180 4_1:+17025541 None:intergenic
CAACAAGACACCCTCGTCAT+AGG 0.457379 4_1:-17024366 Msa0537950:CDS
GGTGACGTTAGCTTTGATTC+CGG 0.459786 4_1:-17031307 Msa0537950:intron
ATAATGTCCTTGTTGATGAA+AGG 0.463710 4_1:-17028295 Msa0537950:CDS
GGCCTTCTTCAGTCTCAAAA+GGG 0.464157 4_1:-17026737 Msa0537950:CDS
TGGAAAGAAGAGTATATTTG+TGG 0.465676 4_1:-17025949 Msa0537950:CDS
TGTTGCATGAACGTTGTTTG+TGG 0.466630 4_1:-17031160 Msa0537950:CDS
CAGTTGCATAGACTGAATAC+AGG 0.468777 4_1:+17027560 None:intergenic
CCTGAGGGGAAACTTATAAT+GGG 0.471341 4_1:-17026960 Msa0537950:CDS
GAGAATATACCTATATTAAG+TGG 0.472374 4_1:-17026767 Msa0537950:CDS
AACAAATTCTGCTTCAGTAC+AGG 0.472669 4_1:-17026925 Msa0537950:intron
AGGCCTCCTGCCGAAGGACG+AGG 0.477953 4_1:-17028140 Msa0537950:CDS
TGTTTGCCCTTCCCACTTGG+TGG 0.481303 4_1:+17024313 None:intergenic
CACAGTTGGTTATGGAGATA+AGG 0.482353 4_1:+17031353 None:intergenic
GCAAGTGATGCTGGTCGAAT+TGG 0.484028 4_1:-17027864 Msa0537950:CDS
CAAGAGTTGCAGCAAATATC+GGG 0.484696 4_1:-17028074 Msa0537950:CDS
TTCCCAGCAGTGCATATCTC+TGG 0.485291 4_1:-17028612 Msa0537950:CDS
GGAGATGATGCAAGTGACTC+TGG 0.485895 4_1:-17024409 Msa0537950:CDS
CCTCACAATGTTGATTTGGA+TGG 0.486454 4_1:-17028515 Msa0537950:CDS
AGACACCCTCGTCATAGGCC+TGG 0.487047 4_1:-17024361 Msa0537950:CDS
GACAGTCCTGAAGAGAATAG+TGG 0.489705 4_1:-17023779 Msa0537950:CDS
TAGCCAGAGATATGCACTGC+TGG 0.491104 4_1:+17028609 None:intergenic
CGATTCGGTGGCGGAAAGGT+TGG 0.493342 4_1:-17031126 Msa0537950:CDS
TATTGATAGCGAGGATGCAC+TGG 0.493835 4_1:-17026534 Msa0537950:CDS
GTGGAACCTCTACGTCGATT+CGG 0.494921 4_1:-17031141 Msa0537950:CDS
CCAAGTGGCTGATGCTGCCA+AGG 0.498515 4_1:-17024053 Msa0537950:CDS
TTTGGCCAAATAATAATAGC+AGG 0.500753 4_1:-17027608 Msa0537950:CDS
ATCAACAAGGACATTATGAA+AGG 0.502025 4_1:+17028301 None:intergenic
GAGACATACCTGAAGCAAAA+TGG 0.503082 4_1:-17023929 Msa0537950:CDS
TTCAAGAAAGTGAATTGTGT+TGG 0.503800 4_1:+17023744 None:intergenic
GGCTAACCAATTAAATGTGA+GGG 0.506229 4_1:-17028591 Msa0537950:CDS
TGGTGGCGGCGAGCGAGTTG+CGG 0.507156 4_1:+17031385 None:intergenic
TCACTTGAATGAGAACCATT+GGG 0.509159 4_1:+17026812 None:intergenic
CTAACGTCACCGGAAGTTTG+AGG 0.510766 4_1:+17031319 None:intergenic
GTTGTCTTTACCACCTGTGC+TGG 0.513012 4_1:-17026609 Msa0537950:intron
TGCTTCAGGTATGTCTCCAA+CGG 0.513673 4_1:+17023935 None:intergenic
GCTTCAGGTATGTCTCCAAC+GGG 0.514701 4_1:+17023936 None:intergenic
CTTCCTCGTCCTTCGGCAGG+AGG 0.514830 4_1:+17028137 None:intergenic
CAGTCTATGCAACTGCAAGC+TGG 0.514895 4_1:-17027552 Msa0537950:CDS
CCTGGAGATAGAGTTGGCCT+AGG 0.516685 4_1:+17028206 None:intergenic
TGCAGTAACATTTAGCCGTA+TGG 0.517779 4_1:-17026985 Msa0537950:intron
ACTTGAATTGCCAACCGGAT+CGG 0.518323 4_1:-17024021 Msa0537950:CDS
AAATTCAGCTTCAAATGTGC+AGG 0.519112 4_1:-17023876 Msa0537950:CDS
TCTCCATAACCAACTGTGAC+CGG 0.520011 4_1:-17031348 Msa0537950:five_prime_UTR
TTCTAGAGAGCGCATTTAGG+TGG 0.520190 4_1:+17026702 None:intergenic
TAAGGAGAAGAAAGAAAGAG+AGG 0.521502 4_1:+17031574 None:intergenic
CCCTCCTATCTCTCAACCTG+AGG 0.521917 4_1:-17027688 Msa0537950:CDS
TAAATGCGCTCTCTAGAAAG+TGG 0.523105 4_1:-17026697 Msa0537950:CDS
TTGTGTTTGCCCTTCCCACT+TGG 0.523559 4_1:+17024310 None:intergenic
ATTAGACTTGAATTGCCAAC+CGG 0.524003 4_1:-17024026 Msa0537950:CDS
GCAAGATATATATGAATCAC+TGG 0.525449 4_1:-17028369 Msa0537950:CDS
GTGTTGCAGCGTGGAGGAGA+GGG 0.525963 4_1:+17031427 None:intergenic
ACGGTTACCGGAGAGAAAAT+GGG 0.527913 4_1:+17031488 None:intergenic
CCGATCTATGTGATAAGTGC+GGG 0.529734 4_1:-17031081 Msa0537950:intron
TAACGTCACCGGAAGTTTGA+GGG 0.531760 4_1:+17031320 None:intergenic
ATGTAGAAATGCCTGAAAGC+AGG 0.533071 4_1:-17026643 Msa0537950:CDS
TTCAACTCCTTGCCTCACAC+TGG 0.534815 4_1:+17023525 None:intergenic
TCCTCGATCATGACAACACT+TGG 0.535986 4_1:+17026452 None:intergenic
GAGTGAGGGAAGACAAAATG+AGG 0.539623 4_1:-17023837 Msa0537950:CDS
CTCCCAATGAATTGAATCCA+AGG 0.539749 4_1:-17025558 Msa0537950:CDS
TTATGGAGATAAGGCGGCGG+CGG 0.541810 4_1:+17031362 None:intergenic
ACATAGATCGGCAAATTCAC+CGG 0.541892 4_1:+17031093 None:intergenic
TCAACAAGGACATTATGAAA+GGG 0.542098 4_1:+17028302 None:intergenic
GGAATCAAAGCTAACGTCAC+CGG 0.542767 4_1:+17031309 None:intergenic
ATGCTTAGTGCAAGTGATGC+TGG 0.543355 4_1:-17027873 Msa0537950:CDS
TGTGTTGCAGCGTGGAGGAG+AGG 0.543588 4_1:+17031426 None:intergenic
CCTAGGCCAACTCTATCTCC+AGG 0.543621 4_1:-17028206 Msa0537950:CDS
TTCTCCATACACGTCCACTT+AGG 0.543699 4_1:+17025695 None:intergenic
CAGTTGGTGCTGACATGGAT+TGG 0.544785 4_1:-17026670 Msa0537950:CDS
ATTCAAGTCTAATTGTCCCT+TGG 0.544992 4_1:+17024036 None:intergenic
GAAGATTCACGATCCAGAGC+TGG 0.546355 4_1:+17024466 None:intergenic
GAAGAAAGAAAGAGAAGGTG+AGG 0.550740 4_1:+17031510 None:intergenic
ATACGCAAAGGAAGGCCCTC+AGG 0.550975 4_1:+17027672 None:intergenic
ATTTGGCAAAGGAGCGGTAA+GGG 0.556170 4_1:+17028325 None:intergenic
AGCACCCAGGCCTATGACGA+GGG 0.556180 4_1:+17024356 None:intergenic
GATGATTATACTTCAAGACT+TGG 0.556252 4_1:+17031625 None:intergenic
GACACCCTCGTCATAGGCCT+GGG 0.556520 4_1:-17024360 Msa0537950:CDS
CCATTATAAGTTTCCCCTCA+GGG 0.557442 4_1:+17026961 None:intergenic
AAGTCCTGAAGTACTTGCAC+AGG 0.558364 4_1:+17029167 None:intergenic
ATGATGCAAGTGACTCTGGC+AGG 0.558412 4_1:-17024405 Msa0537950:CDS
GAACTCAGTTGGTGCTGACA+TGG 0.559385 4_1:-17026675 Msa0537950:CDS
AAGATGTGAAAGGAAAAGAA+TGG 0.562266 4_1:-17027647 Msa0537950:CDS
TTTCCGTCTAATATGCCCAA+TGG 0.563491 4_1:-17026827 Msa0537950:CDS
GATCGGGAAGACATGCAAGC+TGG 0.563741 4_1:-17024004 Msa0537950:CDS
GTTTCCCCTCAGGGTCCATA+CGG 0.563865 4_1:+17026970 None:intergenic
CTTGGCTTAACTTCTGGAGG+TGG 0.565044 4_1:+17026470 None:intergenic
CCCGCACTTATCACATAGAT+CGG 0.565675 4_1:+17031081 None:intergenic
GCTGAAACTTACTTGGGAAG+AGG 0.565759 4_1:-17026510 Msa0537950:CDS
TATCCAGCCACCAAGTGGGA+AGG 0.566881 4_1:-17024320 Msa0537950:CDS
AAAGGTTGGATTCTTCGATC+CGG 0.567319 4_1:-17031112 Msa0537950:CDS
ATGCAGAAAATGATGGGATG+AGG 0.568840 4_1:-17028550 Msa0537950:CDS
ATCCAGCCACCAAGTGGGAA+GGG 0.569945 4_1:-17024319 Msa0537950:CDS
GACAAGCAGCGGCAAGCCAG+AGG 0.570055 4_1:-17024489 Msa0537950:CDS
TTCTCAGGAACCAGCACAGG+TGG 0.570575 4_1:+17026599 None:intergenic
CCTCCTATCTCTCAACCTGA+GGG 0.572708 4_1:-17027687 Msa0537950:CDS
ACGTCGATTCGGTGGCGGAA+AGG 0.573751 4_1:-17031130 Msa0537950:CDS
ACTTATAATGGGGTTCAGGA+AGG 0.575522 4_1:-17026949 Msa0537950:CDS
CCTCTACGTCGATTCGGTGG+CGG 0.575763 4_1:-17031135 Msa0537950:CDS
AGGGAAGTTCCGGTCACAGT+TGG 0.576253 4_1:+17031339 None:intergenic
AGCCAGAGATATGCACTGCT+GGG 0.576349 4_1:+17028610 None:intergenic
GATTTGGCAAAGGAGCGGTA+AGG 0.576714 4_1:+17028324 None:intergenic
TGTCTTGTTGTGGTCAACAC+TGG 0.577354 4_1:+17024379 None:intergenic
TCTAGAAAGTGGAACTCAGT+TGG 0.578317 4_1:-17026686 Msa0537950:CDS
GGAGATAGAGTTGGCCTAGG+AGG 0.578335 4_1:+17028209 None:intergenic
TCTAGAGAGCGCATTTAGGT+GGG 0.579194 4_1:+17026703 None:intergenic
TCCATGCAAAAGAATCTGGT+TGG 0.579415 4_1:-17029378 Msa0537950:CDS
TTCAAAGAGTGGCACAATGG+TGG 0.580676 4_1:+17027899 None:intergenic
GGAATTATGCAGAAAATGAT+GGG 0.581193 4_1:-17028556 Msa0537950:CDS
CGTGGAGGAGAGGGTTTGAA+CGG 0.581485 4_1:+17031436 None:intergenic
GCATGTCTTCCCGATCCGGT+TGG 0.581547 4_1:+17024011 None:intergenic
CCTCAGGTTGAGAGATAGGA+GGG 0.582109 4_1:+17027688 None:intergenic
TCTAAGCCTGGAGATAGAGT+TGG 0.583408 4_1:+17028200 None:intergenic
GATCTAGACGCCAATAGAAG+TGG 0.585121 4_1:+17028251 None:intergenic
TATCTGCAGCGTCTCCATTG+TGG 0.587990 4_1:-17029249 Msa0537950:intron
TGGCGGCGAGCGAGTTGCGG+TGG 0.589236 4_1:+17031388 None:intergenic
ATAGCAAGGCCTCCTGCCGA+AGG 0.591462 4_1:-17028146 Msa0537950:CDS
AATGGGAAGAAAGAAAGAGA+AGG 0.592521 4_1:+17031505 None:intergenic
ATACTCTTCTTTCCAAACAC+AGG 0.593392 4_1:+17025957 None:intergenic
GTCTGTATCCAGCCACCAAG+TGG 0.593579 4_1:-17024325 Msa0537950:CDS
ATGACGAGGGTGTCTTGTTG+TGG 0.595378 4_1:+17024369 None:intergenic
CAGACATTACACGTGCATGT+AGG 0.595381 4_1:+17024286 None:intergenic
ACACTTGGCTTAACTTCTGG+AGG 0.596735 4_1:+17026467 None:intergenic
TTATGAAAGGGATTTGGCAA+AGG 0.597001 4_1:+17028314 None:intergenic
CCCTCAGGTTGAGAGATAGG+AGG 0.598922 4_1:+17027687 None:intergenic
GCTTCCAAATTCTCCAACAG+AGG 0.599653 4_1:+17028460 None:intergenic
ACAGTCCTGAAGAGAATAGT+GGG 0.601508 4_1:-17023778 Msa0537950:CDS
TTCACATCTTGGATACGCAA+AGG 0.602051 4_1:+17027660 None:intergenic
TCCCAATGAATTGAATCCAA+GGG 0.602257 4_1:-17025557 Msa0537950:CDS
TGGCTGGATACAGACAATAC+AGG 0.604446 4_1:+17024333 None:intergenic
GAGGTTGCTTATTGATAGCG+AGG 0.605174 4_1:-17026543 Msa0537950:CDS
GAACCATTGGGCATATTAGA+CGG 0.606117 4_1:+17026824 None:intergenic
CATCTTGGATACGCAAAGGA+AGG 0.606572 4_1:+17027664 None:intergenic
CTCTTCTTTCCAAACACAGG+AGG 0.606920 4_1:+17025960 None:intergenic
CCATCCAAATCAACATTGTG+AGG 0.607409 4_1:+17028515 None:intergenic
TGGCTAACCAATTAAATGTG+AGG 0.608102 4_1:-17028592 Msa0537950:CDS
TGAAGAAGCAAATCTCCCGT+TGG 0.612037 4_1:-17023951 Msa0537950:CDS
CTCCATACACGTCCACTTAG+GGG 0.615994 4_1:+17025697 None:intergenic
TTGCGTATCCAAGATGTGAA+AGG 0.616182 4_1:-17027657 Msa0537950:CDS
TCCATACACGTCCACTTAGG+GGG 0.618210 4_1:+17025698 None:intergenic
AGAGTGTACTTCATGTGGCA+AGG 0.623087 4_1:-17029353 Msa0537950:intron
CAAGAAACAAAGACAAGCAG+CGG 0.623503 4_1:-17024500 Msa0537950:CDS
TTTGTTCCCTTTCATCAACA+AGG 0.624287 4_1:+17028288 None:intergenic
GAGCACCCAGGCCTATGACG+AGG 0.624956 4_1:+17024355 None:intergenic
AGTAAAGCATCTTCTTGCCG+TGG 0.625829 4_1:-17023503 Msa0537950:three_prime_UTR
CTTCCAAATTCTCCAACAGA+GGG 0.627135 4_1:+17028461 None:intergenic
ACAGACAACCAATGAGAGTG+AGG 0.631032 4_1:-17023852 Msa0537950:CDS
TTCAAGTAACCAAGACCAAG+TGG 0.631930 4_1:-17024068 Msa0537950:CDS
TTAGGTTGTACACCAGTGTG+AGG 0.632561 4_1:-17023537 Msa0537950:three_prime_UTR
TTGTACACCAGTGTGAGGCA+AGG 0.633191 4_1:-17023532 Msa0537950:three_prime_UTR
GTAAGCTATAAAATTACAGG+AGG 0.633774 4_1:-17023653 Msa0537950:three_prime_UTR
GGAGGAGAGGGTTTGAACGG+AGG 0.640796 4_1:+17031439 None:intergenic
GCCGATCTATGTGATAAGTG+CGG 0.642160 4_1:-17031082 Msa0537950:CDS
CTCCTGCCGAAGGACGAGGA+AGG 0.643593 4_1:-17028136 Msa0537950:CDS
CTAGACGCCAATAGAAGTGG+AGG 0.644014 4_1:+17028254 None:intergenic
CAGCTTGAAATACTTGACAC+TGG 0.646808 4_1:-17029207 Msa0537950:CDS
TTGAAGCAACACATCCACAA+TGG 0.648024 4_1:+17029235 None:intergenic
GTAATTCTGGGCCAATATCG+CGG 0.648517 4_1:+17028101 None:intergenic
TATTTGTGGTACGATCTACT+GGG 0.648538 4_1:-17025935 Msa0537950:intron
TCTGTATCCAGCCACCAAGT+GGG 0.649632 4_1:-17024324 Msa0537950:CDS
GGTTCGGAGAATGAAGCAAG+AGG 0.650245 4_1:-17024106 Msa0537950:CDS
CCGCCACCGAATCGACGTAG+AGG 0.651077 4_1:+17031135 None:intergenic
GCCAAGTGTTGTCATGATCG+AGG 0.651574 4_1:-17026453 Msa0537950:CDS
AGTTGCATAGACTGAATACA+GGG 0.651610 4_1:+17027561 None:intergenic
ACTGGAGCTGAAACTTACTT+GGG 0.656896 4_1:-17026516 Msa0537950:CDS
TTTCCCAGATACGTATAGCA+AGG 0.657040 4_1:-17028160 Msa0537950:intron
AACTGGAGTTAAATGTCGAG+AGG 0.658373 4_1:+17024132 None:intergenic
CTTAGAAGGAAACACAGGCA+TGG 0.658844 4_1:-17028183 Msa0537950:intron
CCAGGCTTAGAAGGAAACAC+AGG 0.660663 4_1:-17028188 Msa0537950:CDS
GCTAACCAATTAAATGTGAG+GGG 0.663001 4_1:-17028590 Msa0537950:CDS
CAAGTGGCTGATGCTGCCAA+GGG 0.663194 4_1:-17024052 Msa0537950:CDS
TGGTTATGGAGATAAGGCGG+CGG 0.664009 4_1:+17031359 None:intergenic
ACCACAGGATAAGTGAGCAG+TGG 0.664291 4_1:-17025775 Msa0537950:intron
GAACCTCTACGTCGATTCGG+TGG 0.665625 4_1:-17031138 Msa0537950:CDS
CTGAGGGGAAACTTATAATG+GGG 0.667153 4_1:-17026959 Msa0537950:CDS
TCAGCAATCATGGAGGACCA+AGG 0.667770 4_1:-17024176 Msa0537950:CDS
GCATTTGTGTTGCAGCGTGG+AGG 0.669736 4_1:+17031421 None:intergenic
TCTGCATGACAGTTAAACGC+CGG 0.670607 4_1:-17024267 Msa0537950:CDS
TTTAGCCGTATGGACCCTGA+GGG 0.672269 4_1:-17026975 Msa0537950:CDS
AAAGGGATTTGGCAAAGGAG+CGG 0.674141 4_1:+17028319 None:intergenic
TTTGCATTTGTGTTGCAGCG+TGG 0.677898 4_1:+17031418 None:intergenic
GTTCGGAGAATGAAGCAAGA+GGG 0.686630 4_1:-17024105 Msa0537950:CDS
CAGACAACCAATGAGAGTGA+GGG 0.686644 4_1:-17023851 Msa0537950:CDS
ATTTAGCCGTATGGACCCTG+AGG 0.687200 4_1:-17026976 Msa0537950:CDS
AGTTGGTTATGGAGATAAGG+CGG 0.693886 4_1:+17031356 None:intergenic
TGATGCTTTAGCAAATGCTG+CGG 0.695273 4_1:-17024437 Msa0537950:CDS
GATGTATTAATATATTACCA+CGG 0.703213 4_1:+17023486 None:intergenic
TTGCATAGACTGAATACAGG+GGG 0.707100 4_1:+17027563 None:intergenic
TGGAGAGAGTGTACTTCATG+TGG 0.711681 4_1:-17029358 Msa0537950:CDS
CAGACAATACAGGAGCACCC+AGG 0.725333 4_1:+17024343 None:intergenic
CTTGAAATACTTGACACTGG+TGG 0.733966 4_1:-17029204 Msa0537950:CDS
TTAGCCGTATGGACCCTGAG+GGG 0.752430 4_1:-17026974 Msa0537950:CDS
GTTGCATAGACTGAATACAG+GGG 0.770443 4_1:+17027562 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTAAATTTTAATTT+TGG - chr4_1:17029698-17029717 Msa0537950:intron 0.0%
!!! TTTTTTGTTAATTTGAATTT+GGG - chr4_1:17024146-17024165 Msa0537950:CDS 10.0%
!! TCAAAAATAAAATAAAATTG+AGG - chr4_1:17024183-17024202 Msa0537950:CDS 10.0%
!!! TTTTTTATTTTTTGAAAACT+CGG + chr4_1:17024785-17024804 None:intergenic 10.0%
!!! TATATATTTATTTTTTTAGG+TGG + chr4_1:17024958-17024977 None:intergenic 10.0%
!!! CCATATATATTTATTTTTTT+AGG + chr4_1:17024961-17024980 None:intergenic 10.0%
!! CCTAAAAAAATAAATATATA+TGG - chr4_1:17024958-17024977 Msa0537950:intron 10.0%
!!! GAATTTATGATTTTTTTTTT+TGG - chr4_1:17025961-17025980 Msa0537950:CDS 10.0%
!! TTCTTTAAATTGTTAATTAT+AGG - chr4_1:17026958-17026977 Msa0537950:CDS 10.0%
!!! ATTATTTAGATTTTTTTCTT+TGG - chr4_1:17027573-17027592 Msa0537950:CDS 10.0%
!! AGAAAAAAAATATTATATAG+AGG + chr4_1:17027691-17027710 None:intergenic 10.0%
!!! AAAATTTAGTTCAATATTTT+TGG + chr4_1:17027805-17027824 None:intergenic 10.0%
!!! TTATTTGATACATTTTTTTT+TGG - chr4_1:17027916-17027935 Msa0537950:intron 10.0%
!! TAAAATTTAAATAAAAGACT+GGG + chr4_1:17029694-17029713 None:intergenic 10.0%
!! TTAAAATTTAAATAAAAGAC+TGG + chr4_1:17029695-17029714 None:intergenic 10.0%
!!! TTATTTTACAGATTTTTTTT+AGG - chr4_1:17031572-17031591 Msa0537950:five_prime_UTR 10.0%
!!! GTTTTTTGTTAATTTGAATT+TGG - chr4_1:17024145-17024164 Msa0537950:CDS 15.0%
!!! TTTTTGTTAATTTGAATTTG+GGG - chr4_1:17024147-17024166 Msa0537950:CDS 15.0%
!!! ATAGTTTAAAACGTTATTTT+TGG - chr4_1:17024402-17024421 Msa0537950:CDS 15.0%
!!! TATCAGCAATAATTATATTT+TGG + chr4_1:17024498-17024517 None:intergenic 15.0%
!!! AATTTCTTTTTCCATTTTTT+GGG + chr4_1:17024543-17024562 None:intergenic 15.0%
!!! GAGTTTTCAAAAAATAAAAA+AGG - chr4_1:17024784-17024803 Msa0537950:intron 15.0%
!! AAAATCATATATAAACAAAC+AGG + chr4_1:17024984-17025003 None:intergenic 15.0%
!!! TTATATATGATTTTGAAGTT+TGG - chr4_1:17024990-17025009 Msa0537950:intron 15.0%
!!! ATTTTTTACTTATTTGAAGT+TGG - chr4_1:17025490-17025509 Msa0537950:intron 15.0%
!!! TTTTTTACTTATTTGAAGTT+GGG - chr4_1:17025491-17025510 Msa0537950:intron 15.0%
!!! ATTTCAATAGTCTTTTAATT+TGG - chr4_1:17029177-17029196 Msa0537950:CDS 15.0%
!! AAAATTTAAATAAAAGACTG+GGG + chr4_1:17029693-17029712 None:intergenic 15.0%
!! TTCAAAACATATAATTTAAG+AGG + chr4_1:17030318-17030337 None:intergenic 15.0%
!! TTATTGTTGTGAATTTATGA+AGG - chr4_1:17023771-17023790 Msa0537950:CDS 20.0%
!!! TGATTTGATTTGAAATTGTA+CGG - chr4_1:17023990-17024009 Msa0537950:CDS 20.0%
!!! GTTTGTTAAATTGAATTTGA+AGG - chr4_1:17024085-17024104 Msa0537950:CDS 20.0%
!! AATCAACAACAACATAAAAA+GGG + chr4_1:17024286-17024305 None:intergenic 20.0%
!! AAATAAAATGTATGTAGTTG+CGG - chr4_1:17024352-17024371 Msa0537950:CDS 20.0%
!!! CAATTTCTTTTTCCATTTTT+TGG + chr4_1:17024544-17024563 None:intergenic 20.0%
!! AAAAAAGCTGGATAATTATA+TGG - chr4_1:17024926-17024945 Msa0537950:intron 20.0%
!! ATTTACATCTATACTAATCA+TGG + chr4_1:17025470-17025489 None:intergenic 20.0%
!! CATTAAAATACAAAAGTTGT+GGG + chr4_1:17025685-17025704 None:intergenic 20.0%
!! TCATTAAAATACAAAAGTTG+TGG + chr4_1:17025686-17025705 None:intergenic 20.0%
!!! TTTTGTATTTTAATGAGCTA+TGG - chr4_1:17025690-17025709 Msa0537950:CDS 20.0%
!! GGTTATTTATATATGTAACA+AGG + chr4_1:17025865-17025884 None:intergenic 20.0%
!! AAATAGATGAAATATCGTTT+CGG - chr4_1:17025906-17025925 Msa0537950:intron 20.0%
!!! ATCTTGTTTCATTATGTAAT+TGG - chr4_1:17026044-17026063 Msa0537950:intron 20.0%
!!! ATACAAAATAACCCAATTTT+GGG + chr4_1:17026237-17026256 None:intergenic 20.0%
!!! AATACAAAATAACCCAATTT+TGG + chr4_1:17026238-17026257 None:intergenic 20.0%
!! TAAAGAACTAATTACAAAGT+TGG + chr4_1:17026945-17026964 None:intergenic 20.0%
!!! TAATAATGGGTAAATACAAA+AGG + chr4_1:17027204-17027223 None:intergenic 20.0%
!!! ATTTTTTCAGTTCTAAGAAA+TGG + chr4_1:17027256-17027275 None:intergenic 20.0%
!! TTCTTAGAACTGAAAAAATA+TGG - chr4_1:17027257-17027276 Msa0537950:intron 20.0%
!!! ACTAAATTTTCTTGTGTTTT+TGG - chr4_1:17027815-17027834 Msa0537950:intron 20.0%
!!! CTAAATTTTCTTGTGTTTTT+GGG - chr4_1:17027816-17027835 Msa0537950:intron 20.0%
!!! TAAATTTTCTTGTGTTTTTG+GGG - chr4_1:17027817-17027836 Msa0537950:intron 20.0%
!! TATTAAATTACCTATTAAGC+AGG - chr4_1:17028131-17028150 Msa0537950:CDS 20.0%
!! AAAATATAAGTTCTATGACA+TGG - chr4_1:17028794-17028813 Msa0537950:intron 20.0%
!!! TGCATCTTTTATATTTTCTA+TGG - chr4_1:17029106-17029125 Msa0537950:intron 20.0%
!! CAATAAATACTACTAGTAAA+TGG - chr4_1:17029543-17029562 Msa0537950:intron 20.0%
!!! TTCTGAGAAAATATTTCAAT+TGG - chr4_1:17029607-17029626 Msa0537950:intron 20.0%
!!! TTTAGTAATAGATTTTCTCA+GGG - chr4_1:17029764-17029783 Msa0537950:intron 20.0%
!!! CTTTTAAAGAGATACAAAAA+GGG + chr4_1:17029889-17029908 None:intergenic 20.0%
!!! CTTTTTGTATCTCTTTAAAA+GGG - chr4_1:17029888-17029907 Msa0537950:intron 20.0%
!! AAATGTGTAAACTAGATAAA+AGG + chr4_1:17029939-17029958 None:intergenic 20.0%
!!! TTAGTTCTTATGTTTGAATT+AGG - chr4_1:17029957-17029976 Msa0537950:intron 20.0%
!!! AAAAAGTCAATTTTTACAAG+TGG + chr4_1:17030196-17030215 None:intergenic 20.0%
!! ATATAATTTAAGAGGTAAAC+AGG + chr4_1:17030310-17030329 None:intergenic 20.0%
!!! TGATGGATATAAATGTTTTA+GGG + chr4_1:17030451-17030470 None:intergenic 20.0%
!!! ATGATGGATATAAATGTTTT+AGG + chr4_1:17030452-17030471 None:intergenic 20.0%
!!! AACATTTATATCCATCATTT+TGG - chr4_1:17030454-17030473 Msa0537950:intron 20.0%
!! TTACTTGAATCTAATTCATT+TGG + chr4_1:17030907-17030926 None:intergenic 20.0%
!! TATAGCTATTATATGTATAG+TGG + chr4_1:17031411-17031430 None:intergenic 20.0%
!! GATGTATTAATATATTACCA+CGG + chr4_1:17031503-17031522 None:intergenic 20.0%
!! GACAATTTCGATTTTGAATT+CGG - chr4_1:17023705-17023724 Msa0537950:three_prime_UTR 25.0%
!!! TGAGTTGATTCAAATTGTTA+GGG - chr4_1:17023737-17023756 Msa0537950:exon 25.0%
!! CAGTGGATATTTGAATTTTT+AGG - chr4_1:17024019-17024038 Msa0537950:CDS 25.0%
! GAATCAACAACAACATAAAA+AGG + chr4_1:17024287-17024306 None:intergenic 25.0%
!!! TGTTGTTGATTCTTTATAGT+TGG - chr4_1:17024295-17024314 Msa0537950:CDS 25.0%
! TGATAAATACTAAGTAGCAT+AGG - chr4_1:17024513-17024532 Msa0537950:intron 25.0%
!!! TTTATTTTTTTAGGTGGAAC+AGG + chr4_1:17024952-17024971 None:intergenic 25.0%
! TCATAAATTCTGATCTGATT+GGG + chr4_1:17025951-17025970 None:intergenic 25.0%
! ATCATAAATTCTGATCTGAT+TGG + chr4_1:17025952-17025971 None:intergenic 25.0%
! TTGGTATGTAAATTATTGAC+TGG - chr4_1:17026063-17026082 Msa0537950:intron 25.0%
! ATAGTTAGACTTCAAAAATG+AGG + chr4_1:17026209-17026228 None:intergenic 25.0%
! TAACTATATCTTCCCAAAAT+TGG - chr4_1:17026222-17026241 Msa0537950:intron 25.0%
! AACTATATCTTCCCAAAATT+GGG - chr4_1:17026223-17026242 Msa0537950:intron 25.0%
!! AAGTTATCATTGCCAATTTT+GGG + chr4_1:17026293-17026312 None:intergenic 25.0%
! ATTTCCTTAACCATGATTTA+TGG - chr4_1:17027046-17027065 Msa0537950:intron 25.0%
!! GGATGTTTCAATTTAGATTT+TGG - chr4_1:17027360-17027379 Msa0537950:intron 25.0%
! TACATCCTGCTATTATTATT+TGG + chr4_1:17027386-17027405 None:intergenic 25.0%
!!! AAATTGCCCATTTTAAGAAT+TGG - chr4_1:17027496-17027515 Msa0537950:intron 25.0%
! AAGGTTCCAATTCTTAAAAT+GGG + chr4_1:17027505-17027524 None:intergenic 25.0%
! AAACACATACAGAAAAAAGA+AGG + chr4_1:17027524-17027543 None:intergenic 25.0%
! GAGAATATACCTATATTAAG+TGG - chr4_1:17028219-17028238 Msa0537950:CDS 25.0%
! AAGAAAAGAACTCGAAATAT+TGG - chr4_1:17028408-17028427 Msa0537950:intron 25.0%
! AGAAAAGAACTCGAAATATT+GGG - chr4_1:17028409-17028428 Msa0537950:intron 25.0%
!! TATAGTTTAACTTTGACGTA+TGG - chr4_1:17028973-17028992 Msa0537950:intron 25.0%
!! AAGGTCTTACTAAAAAGTTT+TGG + chr4_1:17029369-17029388 None:intergenic 25.0%
!!! AATCTTTTGAGAATGAACAA+TGG - chr4_1:17029460-17029479 Msa0537950:intron 25.0%
!! CTTTAGTAATAGATTTTCTC+AGG - chr4_1:17029763-17029782 Msa0537950:intron 25.0%
!!! CCTTTTAAAGAGATACAAAA+AGG + chr4_1:17029890-17029909 None:intergenic 25.0%
!! CCTTTTTGTATCTCTTTAAA+AGG - chr4_1:17029887-17029906 Msa0537950:intron 25.0%
!!! TTTTTTCAACAATACGAAGA+TGG + chr4_1:17030085-17030104 None:intergenic 25.0%
! AGTTCTGTATTAATACTTCA+TGG - chr4_1:17030281-17030300 Msa0537950:intron 25.0%
! GATTCTATGACTATTATACA+TGG - chr4_1:17030389-17030408 Msa0537950:intron 25.0%
! TGAATTCTATTCCAAAATGA+TGG + chr4_1:17030468-17030487 None:intergenic 25.0%
! AAAAGGGAAAAAATGAAGAT+TGG + chr4_1:17031274-17031293 None:intergenic 25.0%
!!! GACTTTAGAGTAATGTAAAA+GGG + chr4_1:17031290-17031309 None:intergenic 25.0%
!!! TGACTTTAGAGTAATGTAAA+AGG + chr4_1:17031291-17031310 None:intergenic 25.0%
GATGATTATACTTCAAGACT+TGG + chr4_1:17023364-17023383 None:intergenic 30.0%
GTTAGGAAGGAAATGAAAAA+CGG + chr4_1:17023520-17023539 None:intergenic 30.0%
!! GATTTTGAATTCGGTGAATT+TGG - chr4_1:17023714-17023733 Msa0537950:three_prime_UTR 30.0%
!! GTGAGTTGATTCAAATTGTT+AGG - chr4_1:17023736-17023755 Msa0537950:exon 30.0%
TTGTGAATTTATGAAGGTTG+TGG - chr4_1:17023777-17023796 Msa0537950:CDS 30.0%
TGTGGAATTGAAGTTGAAAA+TGG - chr4_1:17023795-17023814 Msa0537950:CDS 30.0%
AAACGCCAAATATTGTTTGT+AGG - chr4_1:17024587-17024606 Msa0537950:intron 30.0%
TTAGGCCTACAAACAATATT+TGG + chr4_1:17024595-17024614 None:intergenic 30.0%
TATGTCTACATCAAAAAAGC+TGG - chr4_1:17024914-17024933 Msa0537950:intron 30.0%
CTGCAGATAATAGAACAAAT+AGG + chr4_1:17025726-17025745 None:intergenic 30.0%
TATTTCATCTATTTCCAGAG+AGG + chr4_1:17025900-17025919 None:intergenic 30.0%
AATGTATGATGATAGATAGC+AGG - chr4_1:17025991-17026010 Msa0537950:intron 30.0%
!!! GTTGTTGCTTTTTGCTTATA+TGG - chr4_1:17026167-17026186 Msa0537950:intron 30.0%
! CAAGTTATCATTGCCAATTT+TGG + chr4_1:17026294-17026313 None:intergenic 30.0%
AATGAAAAGCCTAATGAATC+TGG - chr4_1:17026327-17026346 Msa0537950:intron 30.0%
GGAATTATGCAGAAAATGAT+GGG - chr4_1:17026430-17026449 Msa0537950:CDS 30.0%
GCAAGATATATATGAATCAC+TGG - chr4_1:17026617-17026636 Msa0537950:CDS 30.0%
TCAACAAGGACATTATGAAA+GGG + chr4_1:17026687-17026706 None:intergenic 30.0%
ATCAACAAGGACATTATGAA+AGG + chr4_1:17026688-17026707 None:intergenic 30.0%
! ATAATGTCCTTGTTGATGAA+AGG - chr4_1:17026691-17026710 Msa0537950:CDS 30.0%
! TAATGTCCTTGTTGATGAAA+GGG - chr4_1:17026692-17026711 Msa0537950:CDS 30.0%
AACTCTTGATCTGTAATTCT+GGG + chr4_1:17026900-17026919 None:intergenic 30.0%
!! GTTAAGGAAATGTTTTTCAG+AGG + chr4_1:17027037-17027056 None:intergenic 30.0%
CATACCATAAATCATGGTTA+AGG + chr4_1:17027053-17027072 None:intergenic 30.0%
CTTGAACATACCATAAATCA+TGG + chr4_1:17027059-17027078 None:intergenic 30.0%
! ATTCTTTTCCTTTCACATCT+TGG + chr4_1:17027340-17027359 None:intergenic 30.0%
AAGATGTGAAAGGAAAAGAA+TGG - chr4_1:17027339-17027358 Msa0537950:intron 30.0%
TTTGGCCAAATAATAATAGC+AGG - chr4_1:17027378-17027397 Msa0537950:intron 30.0%
GAAGGTTCCAATTCTTAAAA+TGG + chr4_1:17027506-17027525 None:intergenic 30.0%
GCTGCAATATAAGCTAAATT+TGG - chr4_1:17027548-17027567 Msa0537950:CDS 30.0%
!! GTTTGCTATATGAGCTAAAA+TGG + chr4_1:17028093-17028112 None:intergenic 30.0%
ATTCTCATAAACACCAGAAT+AGG + chr4_1:17028205-17028224 None:intergenic 30.0%
CCAGAATAACCACTTAATAT+AGG + chr4_1:17028231-17028250 None:intergenic 30.0%
CCTATATTAAGTGGTTATTC+TGG - chr4_1:17028228-17028247 Msa0537950:CDS 30.0%
ATATTGGGTCAAAAAGTAAG+AGG - chr4_1:17028424-17028443 Msa0537950:intron 30.0%
TTCTGATATTTAGATTCACC+AGG + chr4_1:17028773-17028792 None:intergenic 30.0%
AAAATTTGCAACTCCAATAC+TGG + chr4_1:17028858-17028877 None:intergenic 30.0%
GAACTTACTTCTATTCATTC+AGG - chr4_1:17029001-17029020 Msa0537950:intron 30.0%
! TGGAAAGAAGAGTATATTTG+TGG - chr4_1:17029037-17029056 Msa0537950:intron 30.0%
TTTCAATTGGCAGTAACAAA+TGG - chr4_1:17029620-17029639 Msa0537950:intron 30.0%
! TTTTGCAATATGTCTGCTTA+TGG - chr4_1:17029643-17029662 Msa0537950:intron 30.0%
TTTGCAATATGTCTGCTTAT+GGG - chr4_1:17029644-17029663 Msa0537950:intron 30.0%
CATCAGATCCAAATTTAAGA+GGG + chr4_1:17029821-17029840 None:intergenic 30.0%
! AAAAGGCTTTTGCATTATTC+AGG + chr4_1:17029922-17029941 None:intergenic 30.0%
GGAAAGATATAGTGCATAAA+AGG + chr4_1:17030064-17030083 None:intergenic 30.0%
! AAGTCAATTTTTACAAGTGG+AGG + chr4_1:17030193-17030212 None:intergenic 30.0%
CAATATGACAAGAATGTGAT+GGG - chr4_1:17030221-17030240 Msa0537950:intron 30.0%
TAACAAACGCAACAACAATA+TGG + chr4_1:17030258-17030277 None:intergenic 30.0%
TATATTATGCTGCATGATCA+AGG - chr4_1:17030361-17030380 Msa0537950:intron 30.0%
TTCAAGAAAGTGAATTGTGT+TGG + chr4_1:17031245-17031264 None:intergenic 30.0%
TGCGTAAGCTATAAAATTAC+AGG - chr4_1:17031330-17031349 Msa0537950:five_prime_UTR 30.0%
GTAAGCTATAAAATTACAGG+AGG - chr4_1:17031333-17031352 Msa0537950:five_prime_UTR 30.0%
! AAAATTACAGGAGGTTTGTT+TGG - chr4_1:17031342-17031361 Msa0537950:five_prime_UTR 30.0%
! AAATTACAGGAGGTTTGTTT+GGG - chr4_1:17031343-17031362 Msa0537950:five_prime_UTR 30.0%
TAAGGAGAAGAAAGAAAGAG+AGG + chr4_1:17023415-17023434 None:intergenic 35.0%
AATGGGAAGAAAGAAAGAGA+AGG + chr4_1:17023484-17023503 None:intergenic 35.0%
AGGAAATGAAAAACGGTTAC+CGG + chr4_1:17023513-17023532 None:intergenic 35.0%
CAAAATCGAAATTGTCGTAC+CGG + chr4_1:17023701-17023720 None:intergenic 35.0%
AAATTGTACGGATCAAACAG+TGG - chr4_1:17024002-17024021 Msa0537950:CDS 35.0%
AAAGGGTCAAAACGACAAAA+CGG + chr4_1:17024269-17024288 None:intergenic 35.0%
GCATAGGATTTCCCAAAAAA+TGG - chr4_1:17024529-17024548 Msa0537950:intron 35.0%
TAGATATTGTCTGTTGTGCT+AGG + chr4_1:17024810-17024829 None:intergenic 35.0%
CTGAAAACTCACACTTAAAG+CGG + chr4_1:17024880-17024899 None:intergenic 35.0%
AGTTTGGAAAGAGCTTTCTT+TGG - chr4_1:17025006-17025025 Msa0537950:intron 35.0%
TGTAGTCACCAGTAATTGTA+GGG - chr4_1:17025298-17025317 Msa0537950:intron 35.0%
AAGCTCAGAGTGAAAATAGT+AGG - chr4_1:17025367-17025386 Msa0537950:intron 35.0%
!! TAGAGCATGAAGCTATTTCT+TGG + chr4_1:17025522-17025541 None:intergenic 35.0%
ATGTTCCATGCAAAAGAATC+TGG - chr4_1:17025604-17025623 Msa0537950:intron 35.0%
AAGTTGTGGGTAAAGAAAAG+TGG + chr4_1:17025672-17025691 None:intergenic 35.0%
CCAGAGAGGTAAATCATAAA+TGG + chr4_1:17025886-17025905 None:intergenic 35.0%
CCATTTATGATTTACCTCTC+TGG - chr4_1:17025883-17025902 Msa0537950:intron 35.0%
AATCGTGCTCTTCCATATAT+AGG - chr4_1:17026142-17026161 Msa0537950:intron 35.0%
AAGCAACAACCTCCTATATA+TGG + chr4_1:17026157-17026176 None:intergenic 35.0%
TAACTGTATCCTCCCAAAAT+TGG - chr4_1:17026278-17026297 Msa0537950:intron 35.0%
! TTATCATTGCCAATTTTGGG+AGG + chr4_1:17026290-17026309 None:intergenic 35.0%
!! TTTGCTGTTCCAGATTCATT+AGG + chr4_1:17026339-17026358 None:intergenic 35.0%
TGGCTAACCAATTAAATGTG+AGG - chr4_1:17026394-17026413 Msa0537950:intron 35.0%
GGCTAACCAATTAAATGTGA+GGG - chr4_1:17026395-17026414 Msa0537950:intron 35.0%
GCTAACCAATTAAATGTGAG+GGG - chr4_1:17026396-17026415 Msa0537950:intron 35.0%
GGGAATTATGCAGAAAATGA+TGG - chr4_1:17026429-17026448 Msa0537950:intron 35.0%
! CAAACCTCACAATGTTGATT+TGG - chr4_1:17026467-17026486 Msa0537950:CDS 35.0%
! TCTGGTTTGATTTCTCTAGA+AGG + chr4_1:17026498-17026517 None:intergenic 35.0%
CAATTTCATCGTGAGTCAAA+TGG - chr4_1:17026561-17026580 Msa0537950:CDS 35.0%
TTATGAAAGGGATTTGGCAA+AGG + chr4_1:17026675-17026694 None:intergenic 35.0%
AGGACATTATGAAAGGGATT+TGG + chr4_1:17026681-17026700 None:intergenic 35.0%
TTTGTTCCCTTTCATCAACA+AGG + chr4_1:17026701-17026720 None:intergenic 35.0%
! ATCTTTTACCTAAACCTCCT+AGG - chr4_1:17026763-17026782 Msa0537950:CDS 35.0%
CAACTCTTGATCTGTAATTC+TGG + chr4_1:17026901-17026920 None:intergenic 35.0%
TCAAGAGTTGCAGCAAATAT+CGG - chr4_1:17026911-17026930 Msa0537950:intron 35.0%
! CTAAGCATCTTTTCAAAGAG+TGG + chr4_1:17027101-17027120 None:intergenic 35.0%
! ATTACTTCAGCACATGCTTT+TGG + chr4_1:17027161-17027180 None:intergenic 35.0%
GAAAAAATATGGCATTGTGC+AGG - chr4_1:17027268-17027287 Msa0537950:intron 35.0%
!! AGCAGGATGTATGTTTTAGA+AGG - chr4_1:17027395-17027414 Msa0537950:intron 35.0%
!!! GCAGGATGTATGTTTTAGAA+GGG - chr4_1:17027396-17027415 Msa0537950:intron 35.0%
!!! CAGGATGTATGTTTTAGAAG+GGG - chr4_1:17027397-17027416 Msa0537950:intron 35.0%
AGTTGCATAGACTGAATACA+GGG + chr4_1:17027428-17027447 None:intergenic 35.0%
!!! GATACTGGTATGTTTTAGTG+AGG - chr4_1:17027458-17027477 Msa0537950:intron 35.0%
! ATTTGTTAGCATATTGAGCC+AGG + chr4_1:17027639-17027658 None:intergenic 35.0%
!!! TTTTCTTGTGTTTTTGGGGA+TGG - chr4_1:17027821-17027840 Msa0537950:intron 35.0%
!!! TTTCTTGTGTTTTTGGGGAT+GGG - chr4_1:17027822-17027841 Msa0537950:intron 35.0%
AACAAATTCTGCTTCAGTAC+AGG - chr4_1:17028061-17028080 Msa0537950:intron 35.0%
GGAAAAGTTTCCTGCTTAAT+AGG + chr4_1:17028144-17028163 None:intergenic 35.0%
TCACTTGAATGAGAACCATT+GGG + chr4_1:17028177-17028196 None:intergenic 35.0%
TTCACTTGAATGAGAACCAT+TGG + chr4_1:17028178-17028197 None:intergenic 35.0%
TCAAGTGAAACTTCCTATTC+TGG - chr4_1:17028189-17028208 Msa0537950:CDS 35.0%
!!! TTTCGAGTTCTTTTCTTCTC+AGG + chr4_1:17028405-17028424 None:intergenic 35.0%
ATACTCTTCTTTCCAAACAC+AGG + chr4_1:17029032-17029051 None:intergenic 35.0%
ATATTTGTGGTACGATCTAC+TGG - chr4_1:17029050-17029069 Msa0537950:intron 35.0%
TATTTGTGGTACGATCTACT+GGG - chr4_1:17029051-17029070 Msa0537950:intron 35.0%
AGTGTGATAGTTGCCAAAAA+TGG - chr4_1:17029238-17029257 Msa0537950:CDS 35.0%
TCCCAATGAATTGAATCCAA+GGG - chr4_1:17029429-17029448 Msa0537950:intron 35.0%
TCCCTTGGATTCAATTCATT+GGG + chr4_1:17029433-17029452 None:intergenic 35.0%
TTCCCTTGGATTCAATTCAT+TGG + chr4_1:17029434-17029453 None:intergenic 35.0%
AAAAGATTATCCAGTTCCCT+TGG + chr4_1:17029448-17029467 None:intergenic 35.0%
! GTAACTATAAAAGCATAGCG+TGG + chr4_1:17029516-17029535 None:intergenic 35.0%
GTTGACATTACACTAAAGCT+AGG - chr4_1:17029581-17029600 Msa0537950:intron 35.0%
GCATCAGATCCAAATTTAAG+AGG + chr4_1:17029822-17029841 None:intergenic 35.0%
GTTGGTGTAGAAATTCAGAA+AGG - chr4_1:17029999-17030018 Msa0537950:intron 35.0%
CAGAAAGGAAAAATATGCAC+AGG - chr4_1:17030014-17030033 Msa0537950:intron 35.0%
AAGGAAAAATATGCACAGGA+TGG - chr4_1:17030018-17030037 Msa0537950:intron 35.0%
AGACTGTTAGAAGATGTACT+AGG + chr4_1:17030148-17030167 None:intergenic 35.0%
CCATCACATTCTTGTCATAT+TGG + chr4_1:17030223-17030242 None:intergenic 35.0%
CCAATATGACAAGAATGTGA+TGG - chr4_1:17030220-17030239 Msa0537950:intron 35.0%
GCAGCATAATATACGATCAT+GGG + chr4_1:17030354-17030373 None:intergenic 35.0%
TGCAGCATAATATACGATCA+TGG + chr4_1:17030355-17030374 None:intergenic 35.0%
! CTTTTTCTTTCGCATCATCA+GGG + chr4_1:17030752-17030771 None:intergenic 35.0%
CTCAGAAAAATCAGCAATCA+TGG - chr4_1:17030800-17030819 Msa0537950:intron 35.0%
AGAAAAATCAGCAATCATGG+AGG - chr4_1:17030803-17030822 Msa0537950:intron 35.0%
!! TTTAACTCCAGTTGATGGTT+CGG - chr4_1:17030864-17030883 Msa0537950:intron 35.0%
ATTCAAGTCTAATTGTCCCT+TGG + chr4_1:17030953-17030972 None:intergenic 35.0%
ATTAGACTTGAATTGCCAAC+CGG - chr4_1:17030960-17030979 Msa0537950:intron 35.0%
! TAGAAAGACCATTTTGCTTC+AGG + chr4_1:17031068-17031087 None:intergenic 35.0%
AAATTCAGCTTCAAATGTGC+AGG - chr4_1:17031110-17031129 Msa0537950:CDS 35.0%
TAGTGGAAAAATTCGCAGTT+AGG + chr4_1:17031394-17031413 None:intergenic 35.0%
! AATGCTGAAGCTTGTGTTTT+AGG - chr4_1:17031431-17031450 Msa0537950:five_prime_UTR 35.0%
GAAGAAAGAAAGAGAAGGTG+AGG + chr4_1:17023479-17023498 None:intergenic 40.0%
! CTTTCTTCCCATTTTCTCTC+CGG - chr4_1:17023491-17023510 Msa0537950:three_prime_UTR 40.0%
AGTTGGTTATGGAGATAAGG+CGG + chr4_1:17023633-17023652 None:intergenic 40.0%
CACAGTTGGTTATGGAGATA+AGG + chr4_1:17023636-17023655 None:intergenic 40.0%
TGTTGCATGAACGTTGTTTG+TGG - chr4_1:17023826-17023845 Msa0537950:CDS 40.0%
AAAGGTTGGATTCTTCGATC+CGG - chr4_1:17023874-17023893 Msa0537950:CDS 40.0%
ACATAGATCGGCAAATTCAC+CGG + chr4_1:17023896-17023915 None:intergenic 40.0%
ATGTATGTAGTTGCGGTTGT+TGG - chr4_1:17024359-17024378 Msa0537950:CDS 40.0%
!!! CATAGGAGTGTGCTTTTTCA+AGG - chr4_1:17024645-17024664 Msa0537950:intron 40.0%
ATTGTCCATAAGCAAAGCTC+TGG + chr4_1:17024717-17024736 None:intergenic 40.0%
AGAGCTTTGCTTATGGACAA+TGG - chr4_1:17024716-17024735 Msa0537950:intron 40.0%
GAGCTTTGCTTATGGACAAT+GGG - chr4_1:17024717-17024736 Msa0537950:intron 40.0%
TATGGACAATGGGATTCGAT+TGG - chr4_1:17024727-17024746 Msa0537950:intron 40.0%
! AGTTAGCCGAACATTTTCTG+TGG - chr4_1:17024829-17024848 Msa0537950:intron 40.0%
GGGTAACCACAGAAAATGTT+CGG + chr4_1:17024838-17024857 None:intergenic 40.0%
ATGAACCGTCAGATCATGAT+CGG + chr4_1:17025190-17025209 None:intergenic 40.0%
GTGTAGTCACCAGTAATTGT+AGG - chr4_1:17025297-17025316 Msa0537950:intron 40.0%
CCAGTAATTGTAGGGAATCT+CGG - chr4_1:17025306-17025325 Msa0537950:intron 40.0%
TCATGCTCTAACTCTTACTC+TGG - chr4_1:17025532-17025551 Msa0537950:CDS 40.0%
TCCATGCAAAAGAATCTGGT+TGG - chr4_1:17025608-17025627 Msa0537950:intron 40.0%
! TCCAACCAGATTCTTTTGCA+TGG + chr4_1:17025612-17025631 None:intergenic 40.0%
TTGAAGCAACACATCCACAA+TGG + chr4_1:17025754-17025773 None:intergenic 40.0%
CAGCTTGAAATACTTGACAC+TGG - chr4_1:17025779-17025798 Msa0537950:intron 40.0%
CTTGAAATACTTGACACTGG+TGG - chr4_1:17025782-17025801 Msa0537950:intron 40.0%
ATTACCTGTGCAAGTACTTC+AGG - chr4_1:17025815-17025834 Msa0537950:intron 40.0%
GCATACCCCTCACATTTAAT+TGG + chr4_1:17026404-17026423 None:intergenic 40.0%
! ATGCAGAAAATGATGGGATG+AGG - chr4_1:17026436-17026455 Msa0537950:CDS 40.0%
! AAAATGATGGGATGAGGTAC+TGG - chr4_1:17026442-17026461 Msa0537950:CDS 40.0%
CCATCCAAATCAACATTGTG+AGG + chr4_1:17026474-17026493 None:intergenic 40.0%
!! CCTCACAATGTTGATTTGGA+TGG - chr4_1:17026471-17026490 Msa0537950:CDS 40.0%
TTACCCTCTGTTGGAGAATT+TGG - chr4_1:17026522-17026541 Msa0537950:CDS 40.0%
CTTCCAAATTCTCCAACAGA+GGG + chr4_1:17026528-17026547 None:intergenic 40.0%
GTGAGTCAAATGGTTCATCT+AGG - chr4_1:17026571-17026590 Msa0537950:CDS 40.0%
! TCAAATGGTTCATCTAGGAC+TGG - chr4_1:17026576-17026595 Msa0537950:CDS 40.0%
AATGTCACCTCCACTTCTAT+TGG - chr4_1:17026725-17026744 Msa0537950:CDS 40.0%
TTTCCCAGATACGTATAGCA+AGG - chr4_1:17026826-17026845 Msa0537950:CDS 40.0%
CAAGAGTTGCAGCAAATATC+GGG - chr4_1:17026912-17026931 Msa0537950:intron 40.0%
! CTTTTCAAAGAGTGGCACAA+TGG + chr4_1:17027093-17027112 None:intergenic 40.0%
TTCACATCTTGGATACGCAA+AGG + chr4_1:17027329-17027348 None:intergenic 40.0%
TTGCGTATCCAAGATGTGAA+AGG - chr4_1:17027329-17027348 Msa0537950:intron 40.0%
TTGCATAGACTGAATACAGG+GGG + chr4_1:17027426-17027445 None:intergenic 40.0%
GTTGCATAGACTGAATACAG+GGG + chr4_1:17027427-17027446 None:intergenic 40.0%
CAGTTGCATAGACTGAATAC+AGG + chr4_1:17027429-17027448 None:intergenic 40.0%
TCAGAATCTTTGCAAGTTCC+TGG - chr4_1:17027618-17027637 Msa0537950:CDS 40.0%
TGCAGTAACATTTAGCCGTA+TGG - chr4_1:17028001-17028020 Msa0537950:intron 40.0%
CCATTATAAGTTTCCCCTCA+GGG + chr4_1:17028028-17028047 None:intergenic 40.0%
CCTGAGGGGAAACTTATAAT+GGG - chr4_1:17028026-17028045 Msa0537950:intron 40.0%
CTGAGGGGAAACTTATAATG+GGG - chr4_1:17028027-17028046 Msa0537950:intron 40.0%
! GGAAACTTATAATGGGGTTC+AGG - chr4_1:17028033-17028052 Msa0537950:intron 40.0%
! ACTTATAATGGGGTTCAGGA+AGG - chr4_1:17028037-17028056 Msa0537950:intron 40.0%
TTTCCGTCTAATATGCCCAA+TGG - chr4_1:17028159-17028178 Msa0537950:intron 40.0%
GAACCATTGGGCATATTAGA+CGG + chr4_1:17028165-17028184 None:intergenic 40.0%
!!! AACCCTTTTGAGACTGAAGA+AGG + chr4_1:17028254-17028273 None:intergenic 40.0%
! ACTTTCTAGAGAGCGCATTT+AGG + chr4_1:17028290-17028309 None:intergenic 40.0%
! TAAATGCGCTCTCTAGAAAG+TGG - chr4_1:17028289-17028308 Msa0537950:CDS 40.0%
TCTAGAAAGTGGAACTCAGT+TGG - chr4_1:17028300-17028319 Msa0537950:CDS 40.0%
ACTGGAGCTGAAACTTACTT+GGG - chr4_1:17028470-17028489 Msa0537950:CDS 40.0%
ACAACACTTGGCTTAACTTC+TGG + chr4_1:17028525-17028544 None:intergenic 40.0%
TACATGCATGCATGATAGAG+AGG - chr4_1:17028637-17028656 Msa0537950:CDS 40.0%
ACATGCATGCATGATAGAGA+GGG - chr4_1:17028638-17028657 Msa0537950:CDS 40.0%
ATAGAGAGGGGCGAAAATTA+TGG - chr4_1:17028651-17028670 Msa0537950:CDS 40.0%
! TATCCAAAGCTTTTCAGTCC+TGG - chr4_1:17028752-17028771 Msa0537950:intron 40.0%
AAGTTAATCACTGCTACGTG+TGG + chr4_1:17028911-17028930 None:intergenic 40.0%
TTGGAGTATGATTGTACCAC+AGG - chr4_1:17029196-17029215 Msa0537950:CDS 40.0%
GTGATAGTTGCCAAAAATGG+CGG - chr4_1:17029241-17029260 Msa0537950:CDS 40.0%
ATGTACTTATTCCCCCTAAG+TGG - chr4_1:17029277-17029296 Msa0537950:intron 40.0%
! GACGTGTATGGAGAACTTTT+GGG - chr4_1:17029299-17029318 Msa0537950:intron 40.0%
!!! AGAACTTTTGGGATCAAAGC+AGG - chr4_1:17029310-17029329 Msa0537950:intron 40.0%
CTCCCAATGAATTGAATCCA+AGG - chr4_1:17029428-17029447 Msa0537950:intron 40.0%
TGAATTGAATCCAAGGGAAC+TGG - chr4_1:17029435-17029454 Msa0537950:intron 40.0%
TGATAGATTGGGGTTCCAAA+TGG - chr4_1:17029791-17029810 Msa0537950:intron 40.0%
GATAGATTGGGGTTCCAAAT+GGG - chr4_1:17029792-17029811 Msa0537950:intron 40.0%
ATTTAAGAGGGAAGCCCATT+TGG + chr4_1:17029809-17029828 None:intergenic 40.0%
ATGGGCTTCCCTCTTAAATT+TGG - chr4_1:17029810-17029829 Msa0537950:intron 40.0%
GAATTTCTACACCAACCGTA+CGG + chr4_1:17029995-17030014 None:intergenic 40.0%
! TATGACAAGAATGTGATGGG+TGG - chr4_1:17030224-17030243 Msa0537950:intron 40.0%
TTATGCTGCATGATCAAGGA+TGG - chr4_1:17030365-17030384 Msa0537950:intron 40.0%
CAAGAAACAAAGACAAGCAG+CGG - chr4_1:17030486-17030505 Msa0537950:intron 40.0%
TGATGCTTTAGCAAATGCTG+CGG - chr4_1:17030549-17030568 Msa0537950:intron 40.0%
!!! GCATCATCAGGGTTTTAAAC+CGG + chr4_1:17030741-17030760 None:intergenic 40.0%
!! GCTTTTTCTTTCGCATCATC+AGG + chr4_1:17030753-17030772 None:intergenic 40.0%
GTCTACTTCTGATTCATCCT+TGG + chr4_1:17030830-17030849 None:intergenic 40.0%
AACTGGAGTTAAATGTCGAG+AGG + chr4_1:17030857-17030876 None:intergenic 40.0%
CGACATTTAACTCCAGTTGA+TGG - chr4_1:17030859-17030878 Msa0537950:intron 40.0%
TTCAAGTAACCAAGACCAAG+TGG - chr4_1:17030918-17030937 Msa0537950:intron 40.0%
GAGACATACCTGAAGCAAAA+TGG - chr4_1:17031057-17031076 Msa0537950:intron 40.0%
ACAGTCCTGAAGAGAATAGT+GGG - chr4_1:17031208-17031227 Msa0537950:intron 40.0%
GGGAAAAAATGAAGATTGGC+AGG + chr4_1:17031270-17031289 None:intergenic 40.0%
AAGCGTGTGCATGCAGAATA+AGG + chr4_1:17023433-17023452 None:intergenic 45.0%
ACGGTTACCGGAGAGAAAAT+GGG + chr4_1:17023501-17023520 None:intergenic 45.0%
AACGGTTACCGGAGAGAAAA+TGG + chr4_1:17023502-17023521 None:intergenic 45.0%
TGAACGGAGGAGAAGAAGTT+AGG + chr4_1:17023537-17023556 None:intergenic 45.0%
TTTGCATTTGTGTTGCAGCG+TGG + chr4_1:17023571-17023590 None:intergenic 45.0%
TCTCCATAACCAACTGTGAC+CGG - chr4_1:17023638-17023657 Msa0537950:three_prime_UTR 45.0%
TAACGTCACCGGAAGTTTGA+GGG + chr4_1:17023669-17023688 None:intergenic 45.0%
GGAATCAAAGCTAACGTCAC+CGG + chr4_1:17023680-17023699 None:intergenic 45.0%
!! GGTGACGTTAGCTTTGATTC+CGG - chr4_1:17023679-17023698 Msa0537950:three_prime_UTR 45.0%
GCCGATCTATGTGATAAGTG+CGG - chr4_1:17023904-17023923 Msa0537950:CDS 45.0%
CCCGCACTTATCACATAGAT+CGG + chr4_1:17023908-17023927 None:intergenic 45.0%
CCGATCTATGTGATAAGTGC+GGG - chr4_1:17023905-17023924 Msa0537950:CDS 45.0%
! TGCGGTTGTTGGTAAGATTG+TGG - chr4_1:17024370-17024389 Msa0537950:CDS 45.0%
! TGTTGGTAAGATTGTGGCTG+CGG - chr4_1:17024376-17024395 Msa0537950:CDS 45.0%
!! ACCACTAGCTCTGTTGAGTT+AGG + chr4_1:17024613-17024632 None:intergenic 45.0%
!! ATGGACTAGCCCATCGAAAT+TGG + chr4_1:17024694-17024713 None:intergenic 45.0%
TCCATCCAGAGCTTTGCTTA+TGG - chr4_1:17024709-17024728 Msa0537950:intron 45.0%
!! TCCATAAGCAAAGCTCTGGA+TGG + chr4_1:17024713-17024732 None:intergenic 45.0%
ATTGGACCCCTCAGATTAGT+CGG - chr4_1:17024745-17024764 Msa0537950:intron 45.0%
CTAAGACCGACTAATCTGAG+GGG + chr4_1:17024754-17024773 None:intergenic 45.0%
CCTAAGACCGACTAATCTGA+GGG + chr4_1:17024755-17024774 None:intergenic 45.0%
! CCTCAGATTAGTCGGTCTTA+GGG - chr4_1:17024753-17024772 Msa0537950:intron 45.0%
! ACATTTTCTGTGGTTACCCC+AGG - chr4_1:17024839-17024858 Msa0537950:intron 45.0%
ACCATCCGATCATGATCTGA+CGG - chr4_1:17025182-17025201 Msa0537950:intron 45.0%
CCGAGATTCCCTACAATTAC+TGG + chr4_1:17025309-17025328 None:intergenic 45.0%
TCACAAGACTCGTGGGTATA+AGG + chr4_1:17025333-17025352 None:intergenic 45.0%
AACCATGTCACAAGACTCGT+GGG + chr4_1:17025340-17025359 None:intergenic 45.0%
AAACCATGTCACAAGACTCG+TGG + chr4_1:17025341-17025360 None:intergenic 45.0%
! TGGAGAGAGTGTACTTCATG+TGG - chr4_1:17025628-17025647 Msa0537950:intron 45.0%
AGAGTGTACTTCATGTGGCA+AGG - chr4_1:17025633-17025652 Msa0537950:intron 45.0%
! AAGTCCTGAAGTACTTGCAC+AGG + chr4_1:17025822-17025841 None:intergenic 45.0%
ACAAGGTGAAGTGAGCTTAC+AGG + chr4_1:17025848-17025867 None:intergenic 45.0%
CGTGCTCTTCCATATATAGG+AGG - chr4_1:17026145-17026164 Msa0537950:intron 45.0%
! AATGTGAGGGGTATGCAAGT+TGG - chr4_1:17026408-17026427 Msa0537950:intron 45.0%
! ATGTGAGGGGTATGCAAGTT+GGG - chr4_1:17026409-17026428 Msa0537950:intron 45.0%
CCAACAGAGGGTAAAACTTC+TGG + chr4_1:17026516-17026535 None:intergenic 45.0%
! CCAGAAGTTTTACCCTCTGT+TGG - chr4_1:17026513-17026532 Msa0537950:CDS 45.0%
GCTTCCAAATTCTCCAACAG+AGG + chr4_1:17026529-17026548 None:intergenic 45.0%
ATTTGGCAAAGGAGCGGTAA+GGG + chr4_1:17026664-17026683 None:intergenic 45.0%
AAAGGGATTTGGCAAAGGAG+CGG + chr4_1:17026670-17026689 None:intergenic 45.0%
GATCTAGACGCCAATAGAAG+TGG + chr4_1:17026738-17026757 None:intergenic 45.0%
TCTAAGCCTGGAGATAGAGT+TGG + chr4_1:17026789-17026808 None:intergenic 45.0%
ACTCTATCTCCAGGCTTAGA+AGG - chr4_1:17026789-17026808 Msa0537950:CDS 45.0%
CTTAGAAGGAAACACAGGCA+TGG - chr4_1:17026803-17026822 Msa0537950:CDS 45.0%
! AGGCCTTGCTATACGTATCT+GGG + chr4_1:17026832-17026851 None:intergenic 45.0%
ATCAGTTGCTTCCGCGATAT+TGG - chr4_1:17026874-17026893 Msa0537950:intron 45.0%
GTAATTCTGGGCCAATATCG+CGG + chr4_1:17026888-17026907 None:intergenic 45.0%
TTCAAAGAGTGGCACAATGG+TGG + chr4_1:17027090-17027109 None:intergenic 45.0%
ATGCTTAGTGCAAGTGATGC+TGG - chr4_1:17027113-17027132 Msa0537950:intron 45.0%
CATCTTGGATACGCAAAGGA+AGG + chr4_1:17027325-17027344 None:intergenic 45.0%
CCCTGAGGGGAAACTTATAA+TGG - chr4_1:17028025-17028044 Msa0537950:intron 45.0%
CCCATTATAAGTTTCCCCTC+AGG + chr4_1:17028029-17028048 None:intergenic 45.0%
TGGCCTTCTTCAGTCTCAAA+AGG - chr4_1:17028248-17028267 Msa0537950:CDS 45.0%
GGCCTTCTTCAGTCTCAAAA+GGG - chr4_1:17028249-17028268 Msa0537950:CDS 45.0%
! TCTAGAGAGCGCATTTAGGT+GGG + chr4_1:17028286-17028305 None:intergenic 45.0%
! TTCTAGAGAGCGCATTTAGG+TGG + chr4_1:17028287-17028306 None:intergenic 45.0%
!! GAGGTTGCTTATTGATAGCG+AGG - chr4_1:17028443-17028462 Msa0537950:intron 45.0%
!! TATTGATAGCGAGGATGCAC+TGG - chr4_1:17028452-17028471 Msa0537950:CDS 45.0%
CACTGGAGCTGAAACTTACT+TGG - chr4_1:17028469-17028488 Msa0537950:CDS 45.0%
GCTGAAACTTACTTGGGAAG+AGG - chr4_1:17028476-17028495 Msa0537950:CDS 45.0%
ACACTTGGCTTAACTTCTGG+AGG + chr4_1:17028522-17028541 None:intergenic 45.0%
TCCTCGATCATGACAACACT+TGG + chr4_1:17028537-17028556 None:intergenic 45.0%
CATGCATGCATGATAGAGAG+GGG - chr4_1:17028639-17028658 Msa0537950:CDS 45.0%
TCACCAGGACTGAAAAGCTT+TGG + chr4_1:17028758-17028777 None:intergenic 45.0%
GACATGGACTTTACCTGCAT+TGG - chr4_1:17028810-17028829 Msa0537950:intron 45.0%
! GCGTATTGATAGACCAATGC+AGG + chr4_1:17028826-17028845 None:intergenic 45.0%
ACGCATGCACTAACCAGTAT+TGG - chr4_1:17028842-17028861 Msa0537950:intron 45.0%
CTCTTCTTTCCAAACACAGG+AGG + chr4_1:17029029-17029048 None:intergenic 45.0%
! CCAAAAATGGCGGAAGTTAC+CGG - chr4_1:17029251-17029270 Msa0537950:intron 45.0%
GGGGGAATAAGTACATCAAC+CGG + chr4_1:17029273-17029292 None:intergenic 45.0%
TCTCCATACACGTCCACTTA+GGG + chr4_1:17029293-17029312 None:intergenic 45.0%
TTCTCCATACACGTCCACTT+AGG + chr4_1:17029294-17029313 None:intergenic 45.0%
! GGACGTGTATGGAGAACTTT+TGG - chr4_1:17029298-17029317 Msa0537950:intron 45.0%
GATCAAAGCAGGTGAGTAGA+AGG - chr4_1:17029321-17029340 Msa0537950:intron 45.0%
ACAGCATCGCATAAGCACAA+AGG + chr4_1:17029388-17029407 None:intergenic 45.0%
TCTCAGGGACACTGATAGAT+TGG - chr4_1:17029779-17029798 Msa0537950:intron 45.0%
CTCAGGGACACTGATAGATT+GGG - chr4_1:17029780-17029799 Msa0537950:intron 45.0%
TCAGGGACACTGATAGATTG+GGG - chr4_1:17029781-17029800 Msa0537950:intron 45.0%
AGGAGATTTGACAGTCCGTA+CGG - chr4_1:17029977-17029996 Msa0537950:intron 45.0%
TTAGCAAATGCTGCGGTACT+TGG - chr4_1:17030556-17030575 Msa0537950:intron 45.0%
! TGTCTTGTTGTGGTCAACAC+TGG + chr4_1:17030610-17030629 None:intergenic 45.0%
TGGCTGGATACAGACAATAC+AGG + chr4_1:17030656-17030675 None:intergenic 45.0%
CAGACATTACACGTGCATGT+AGG + chr4_1:17030703-17030722 None:intergenic 45.0%
TCTGCATGACAGTTAAACGC+CGG - chr4_1:17030719-17030738 Msa0537950:intron 45.0%
TCATTCTCCGAACCATCAAC+TGG + chr4_1:17030874-17030893 None:intergenic 45.0%
GTTCGGAGAATGAAGCAAGA+GGG - chr4_1:17030881-17030900 Msa0537950:intron 45.0%
ACTTGAATTGCCAACCGGAT+CGG - chr4_1:17030965-17030984 Msa0537950:intron 45.0%
! GTCATCATGCTCAGAGTGTT+TGG + chr4_1:17031009-17031028 None:intergenic 45.0%
TGAAGAAGCAAATCTCCCGT+TGG - chr4_1:17031035-17031054 Msa0537950:intron 45.0%
TGCTTCAGGTATGTCTCCAA+CGG + chr4_1:17031054-17031073 None:intergenic 45.0%
ACAGACAACCAATGAGAGTG+AGG - chr4_1:17031134-17031153 Msa0537950:CDS 45.0%
CAGACAACCAATGAGAGTGA+GGG - chr4_1:17031135-17031154 Msa0537950:CDS 45.0%
TTGTCTTCCCTCACTCTCAT+TGG + chr4_1:17031145-17031164 None:intergenic 45.0%
GAGTGAGGGAAGACAAAATG+AGG - chr4_1:17031149-17031168 Msa0537950:CDS 45.0%
TGCTTCTGCAGTTCATGAAC+AGG - chr4_1:17031182-17031201 Msa0537950:exon 45.0%
GACAGTCCTGAAGAGAATAG+TGG - chr4_1:17031207-17031226 Msa0537950:intron 45.0%
TCTTGCCCACTATTCTCTTC+AGG + chr4_1:17031216-17031235 None:intergenic 45.0%
! TTAGGTTGTACACCAGTGTG+AGG - chr4_1:17031449-17031468 Msa0537950:five_prime_UTR 45.0%
! AGTAAAGCATCTTCTTGCCG+TGG - chr4_1:17031483-17031502 Msa0537950:five_prime_UTR 45.0%
!!! AATTTATGATTTTTTTTTTT+GGG - chr4_1:17025962-17025981 Msa0537950:CDS 5.0%
!! ATAAAAATAACTATAATAAT+GGG + chr4_1:17027217-17027236 None:intergenic 5.0%
!! AATAAAAATAACTATAATAA+TGG + chr4_1:17027218-17027237 None:intergenic 5.0%
CGGAGGAGAAGAAGTTAGGA+AGG + chr4_1:17023533-17023552 None:intergenic 50.0%
TGGTTATGGAGATAAGGCGG+CGG + chr4_1:17023630-17023649 None:intergenic 50.0%
GTTCCGGTCACAGTTGGTTA+TGG + chr4_1:17023644-17023663 None:intergenic 50.0%
CGGAAGTTTGAGGGAAGTTC+CGG + chr4_1:17023660-17023679 None:intergenic 50.0%
CGGAACTTCCCTCAAACTTC+CGG - chr4_1:17023658-17023677 Msa0537950:three_prime_UTR 50.0%
CTAACGTCACCGGAAGTTTG+AGG + chr4_1:17023670-17023689 None:intergenic 50.0%
! GTGGAACCTCTACGTCGATT+CGG - chr4_1:17023845-17023864 Msa0537950:CDS 50.0%
GGGTCAAAACGACAAAACGG+TGG + chr4_1:17024266-17024285 None:intergenic 50.0%
GCCTAACTCAACAGAGCTAG+TGG - chr4_1:17024609-17024628 Msa0537950:intron 50.0%
! GTGGTGATGACGTGAGACAT+AGG - chr4_1:17024628-17024647 Msa0537950:intron 50.0%
TAGCCCATCGAAATTGGCAC+CGG + chr4_1:17024688-17024707 None:intergenic 50.0%
! CCCTCAGATTAGTCGGTCTT+AGG - chr4_1:17024752-17024771 Msa0537950:intron 50.0%
CCCTAAGACCGACTAATCTG+AGG + chr4_1:17024756-17024775 None:intergenic 50.0%
! CAGATTAGTCGGTCTTAGGG+CGG - chr4_1:17024756-17024775 Msa0537950:intron 50.0%
TTTCTGTGGTTACCCCAGGT+CGG - chr4_1:17024843-17024862 Msa0537950:intron 50.0%
ACACTTAAAGCGGAGATCCC+AGG + chr4_1:17024870-17024889 None:intergenic 50.0%
TGCATGCAATCAGTGACTGC+AGG + chr4_1:17025145-17025164 None:intergenic 50.0%
CATGCATTCACAGTGACTGC+AGG - chr4_1:17025159-17025178 Msa0537950:intron 50.0%
ACCGTCAGATCATGATCGGA+TGG + chr4_1:17025186-17025205 None:intergenic 50.0%
TGAACAGTCCGATCTCGATC+AGG - chr4_1:17025264-17025283 Msa0537950:intron 50.0%
! TACCCACGAGTCTTGTGACA+TGG - chr4_1:17025335-17025354 Msa0537950:intron 50.0%
TATCTGCAGCGTCTCCATTG+TGG - chr4_1:17025737-17025756 Msa0537950:CDS 50.0%
TTCCCAGCAGTGCATATCTC+TGG - chr4_1:17026374-17026393 Msa0537950:intron 50.0%
AGCCAGAGATATGCACTGCT+GGG + chr4_1:17026379-17026398 None:intergenic 50.0%
TAGCCAGAGATATGCACTGC+TGG + chr4_1:17026380-17026399 None:intergenic 50.0%
GATTTGGCAAAGGAGCGGTA+AGG + chr4_1:17026665-17026684 None:intergenic 50.0%
CTAGACGCCAATAGAAGTGG+AGG + chr4_1:17026735-17026754 None:intergenic 50.0%
! AGAGTTGGCCTAGGAGGTTT+AGG + chr4_1:17026774-17026793 None:intergenic 50.0%
CCTGTGTTTCCTTCTAAGCC+TGG + chr4_1:17026801-17026820 None:intergenic 50.0%
CCAGGCTTAGAAGGAAACAC+AGG - chr4_1:17026798-17026817 Msa0537950:CDS 50.0%
! GAGGCCTTGCTATACGTATC+TGG + chr4_1:17026833-17026852 None:intergenic 50.0%
CTGATTCCTTCCTCGTCCTT+CGG + chr4_1:17026859-17026878 None:intergenic 50.0%
GCAAGTGATGCTGGTCGAAT+TGG - chr4_1:17027122-17027141 Msa0537950:intron 50.0%
!! CCTCAGGTTGAGAGATAGGA+GGG + chr4_1:17027301-17027320 None:intergenic 50.0%
CCTCCTATCTCTCAACCTGA+GGG - chr4_1:17027299-17027318 Msa0537950:intron 50.0%
CAGTCTATGCAACTGCAAGC+TGG - chr4_1:17027434-17027453 Msa0537950:intron 50.0%
ATTTAGCCGTATGGACCCTG+AGG - chr4_1:17028010-17028029 Msa0537950:intron 50.0%
TTTAGCCGTATGGACCCTGA+GGG - chr4_1:17028011-17028030 Msa0537950:intron 50.0%
!! GAACTCAGTTGGTGCTGACA+TGG - chr4_1:17028311-17028330 Msa0537950:CDS 50.0%
!! CAGTTGGTGCTGACATGGAT+TGG - chr4_1:17028316-17028335 Msa0537950:CDS 50.0%
GTTGTCTTTACCACCTGTGC+TGG - chr4_1:17028377-17028396 Msa0537950:CDS 50.0%
TTCTTCTCAGGAACCAGCAC+AGG + chr4_1:17028393-17028412 None:intergenic 50.0%
ACTTACTTGGGAAGAGGCTC+AGG - chr4_1:17028482-17028501 Msa0537950:CDS 50.0%
! CTTGGCTTAACTTCTGGAGG+TGG + chr4_1:17028519-17028538 None:intergenic 50.0%
! GCCAAGTGTTGTCATGATCG+AGG - chr4_1:17028533-17028552 Msa0537950:CDS 50.0%
ATTCAGGAGCCTCCTGTGTT+TGG - chr4_1:17029017-17029036 Msa0537950:intron 50.0%
ACCACAGGATAAGTGAGCAG+TGG - chr4_1:17029211-17029230 Msa0537950:CDS 50.0%
TCCACTGCTCACTTATCCTG+TGG + chr4_1:17029215-17029234 None:intergenic 50.0%
!! CCGGTAACTTCCGCCATTTT+TGG + chr4_1:17029254-17029273 None:intergenic 50.0%
TCCATACACGTCCACTTAGG+GGG + chr4_1:17029291-17029310 None:intergenic 50.0%
CTCCATACACGTCCACTTAG+GGG + chr4_1:17029292-17029311 None:intergenic 50.0%
GATTTGACAGTCCGTACGGT+TGG - chr4_1:17029981-17030000 Msa0537950:intron 50.0%
GAAGATTCACGATCCAGAGC+TGG + chr4_1:17030523-17030542 None:intergenic 50.0%
! GCTCTGGATCGTGAATCTTC+TGG - chr4_1:17030523-17030542 Msa0537950:intron 50.0%
GGAGATGATGCAAGTGACTC+TGG - chr4_1:17030577-17030596 Msa0537950:intron 50.0%
ATGATGCAAGTGACTCTGGC+AGG - chr4_1:17030581-17030600 Msa0537950:intron 50.0%
!! ATGACGAGGGTGTCTTGTTG+TGG + chr4_1:17030620-17030639 None:intergenic 50.0%
CAACAAGACACCCTCGTCAT+AGG - chr4_1:17030620-17030639 Msa0537950:intron 50.0%
TCTGTATCCAGCCACCAAGT+GGG - chr4_1:17030662-17030681 Msa0537950:intron 50.0%
TTGTGTTTGCCCTTCCCACT+TGG + chr4_1:17030679-17030698 None:intergenic 50.0%
TCAGCAATCATGGAGGACCA+AGG - chr4_1:17030810-17030829 Msa0537950:intron 50.0%
GGTTCGGAGAATGAAGCAAG+AGG - chr4_1:17030880-17030899 Msa0537950:intron 50.0%
CTTGAATTGCCAACCGGATC+GGG - chr4_1:17030966-17030985 Msa0537950:intron 50.0%
GCTTCAGGTATGTCTCCAAC+GGG + chr4_1:17031053-17031072 None:intergenic 50.0%
TTGTACACCAGTGTGAGGCA+AGG - chr4_1:17031454-17031473 Msa0537950:five_prime_UTR 50.0%
TTCAACTCCTTGCCTCACAC+TGG + chr4_1:17031464-17031483 None:intergenic 50.0%
CGTGGAGGAGAGGGTTTGAA+CGG + chr4_1:17023553-17023572 None:intergenic 55.0%
GCATTTGTGTTGCAGCGTGG+AGG + chr4_1:17023568-17023587 None:intergenic 55.0%
TTATGGAGATAAGGCGGCGG+CGG + chr4_1:17023627-17023646 None:intergenic 55.0%
AGGGAAGTTCCGGTCACAGT+TGG + chr4_1:17023650-17023669 None:intergenic 55.0%
!! GAACCTCTACGTCGATTCGG+TGG - chr4_1:17023848-17023867 Msa0537950:CDS 55.0%
GGTGTCAAGTTCGTTTCCCC+CGG - chr4_1:17024666-17024685 Msa0537950:intron 55.0%
AGCCCATCGAAATTGGCACC+GGG + chr4_1:17024687-17024706 None:intergenic 55.0%
CGTGACTGCCTGATCGAGAT+CGG + chr4_1:17025275-17025294 None:intergenic 55.0%
! GGAGATAGAGTTGGCCTAGG+AGG + chr4_1:17026780-17026799 None:intergenic 55.0%
! CCTGGAGATAGAGTTGGCCT+AGG + chr4_1:17026783-17026802 None:intergenic 55.0%
CCTAGGCCAACTCTATCTCC+AGG - chr4_1:17026780-17026799 Msa0537950:CDS 55.0%
TGCTGGTCGAATTGGTCGCT+TGG - chr4_1:17027130-17027149 Msa0537950:intron 55.0%
CCCTCCTATCTCTCAACCTG+AGG - chr4_1:17027298-17027317 Msa0537950:intron 55.0%
!! CCCTCAGGTTGAGAGATAGG+AGG + chr4_1:17027302-17027321 None:intergenic 55.0%
!! AGGCCCTCAGGTTGAGAGAT+AGG + chr4_1:17027305-17027324 None:intergenic 55.0%
ATACGCAAAGGAAGGCCCTC+AGG + chr4_1:17027317-17027336 None:intergenic 55.0%
CAACTGCAAGCTGGCGATAC+TGG - chr4_1:17027443-17027462 Msa0537950:intron 55.0%
TTAGCCGTATGGACCCTGAG+GGG - chr4_1:17028012-17028031 Msa0537950:intron 55.0%
GTTTCCCCTCAGGGTCCATA+CGG + chr4_1:17028019-17028038 None:intergenic 55.0%
TTCTCAGGAACCAGCACAGG+TGG + chr4_1:17028390-17028409 None:intergenic 55.0%
TCCCCCTAAGTGGACGTGTA+TGG - chr4_1:17029287-17029306 Msa0537950:intron 55.0%
GCTTATGCGATGCTGTCAGC+AGG - chr4_1:17029392-17029411 Msa0537950:CDS 55.0%
!! CAGACAATACAGGAGCACCC+AGG + chr4_1:17030646-17030665 None:intergenic 55.0%
GTCTGTATCCAGCCACCAAG+TGG - chr4_1:17030661-17030680 Msa0537950:intron 55.0%
TATCCAGCCACCAAGTGGGA+AGG - chr4_1:17030666-17030685 Msa0537950:intron 55.0%
ATCCAGCCACCAAGTGGGAA+GGG - chr4_1:17030667-17030686 Msa0537950:intron 55.0%
TGTTTGCCCTTCCCACTTGG+TGG + chr4_1:17030676-17030695 None:intergenic 55.0%
CAGCATCAGCCACTTGGTCT+TGG + chr4_1:17030930-17030949 None:intergenic 55.0%
CAAGTGGCTGATGCTGCCAA+GGG - chr4_1:17030934-17030953 Msa0537950:intron 55.0%
GCTTGCATGTCTTCCCGATC+CGG + chr4_1:17030982-17031001 None:intergenic 55.0%
GATCGGGAAGACATGCAAGC+TGG - chr4_1:17030982-17031001 Msa0537950:intron 55.0%
GGAGGAGAGGGTTTGAACGG+AGG + chr4_1:17023550-17023569 None:intergenic 60.0%
GTGTTGCAGCGTGGAGGAGA+GGG + chr4_1:17023562-17023581 None:intergenic 60.0%
TGTGTTGCAGCGTGGAGGAG+AGG + chr4_1:17023563-17023582 None:intergenic 60.0%
! CGAGCGAGTTGCGGTGGTTT+TGG + chr4_1:17023595-17023614 None:intergenic 60.0%
!! CCTCTACGTCGATTCGGTGG+CGG - chr4_1:17023851-17023870 Msa0537950:CDS 60.0%
!! ACGTCGATTCGGTGGCGGAA+AGG - chr4_1:17023856-17023875 Msa0537950:CDS 60.0%
!! CGATTCGGTGGCGGAAAGGT+TGG - chr4_1:17023860-17023879 Msa0537950:CDS 60.0%
! TCCCCCGGTGCCAATTTCGA+TGG - chr4_1:17024681-17024700 Msa0537950:intron 60.0%
! CCCATCGAAATTGGCACCGG+GGG + chr4_1:17024685-17024704 None:intergenic 60.0%
! CCCCCGGTGCCAATTTCGAT+GGG - chr4_1:17024682-17024701 Msa0537950:intron 60.0%
GCCCATCGAAATTGGCACCG+GGG + chr4_1:17024686-17024705 None:intergenic 60.0%
ATAGCAAGGCCTCCTGCCGA+AGG - chr4_1:17026840-17026859 Msa0537950:intron 60.0%
TTCCTTCCTCGTCCTTCGGC+AGG + chr4_1:17026855-17026874 None:intergenic 60.0%
AGACACCCTCGTCATAGGCC+TGG - chr4_1:17030625-17030644 Msa0537950:intron 60.0%
GACACCCTCGTCATAGGCCT+GGG - chr4_1:17030626-17030645 Msa0537950:intron 60.0%
AGCACCCAGGCCTATGACGA+GGG + chr4_1:17030633-17030652 None:intergenic 60.0%
CCTTGGCAGCATCAGCCACT+TGG + chr4_1:17030936-17030955 None:intergenic 60.0%
CCAAGTGGCTGATGCTGCCA+AGG - chr4_1:17030933-17030952 Msa0537950:intron 60.0%
GCATGTCTTCCCGATCCGGT+TGG + chr4_1:17030978-17030997 None:intergenic 60.0%
CCGCCACCGAATCGACGTAG+AGG + chr4_1:17023854-17023873 None:intergenic 65.0%
TGGTTACCCCAGGTCGGACC+TGG - chr4_1:17024849-17024868 Msa0537950:intron 65.0%
GGTTACCCCAGGTCGGACCT+GGG - chr4_1:17024850-17024869 Msa0537950:intron 65.0%
GAGATCCCAGGTCCGACCTG+GGG + chr4_1:17024858-17024877 None:intergenic 65.0%
GGAGATCCCAGGTCCGACCT+GGG + chr4_1:17024859-17024878 None:intergenic 65.0%
CTTCCTCGTCCTTCGGCAGG+AGG + chr4_1:17026852-17026871 None:intergenic 65.0%
CTCCTGCCGAAGGACGAGGA+AGG - chr4_1:17026850-17026869 Msa0537950:intron 65.0%
GACAAGCAGCGGCAAGCCAG+AGG - chr4_1:17030497-17030516 Msa0537950:intron 65.0%
! CACGATCCAGAGCTGGCCTC+TGG + chr4_1:17030516-17030535 None:intergenic 65.0%
GAGCACCCAGGCCTATGACG+AGG + chr4_1:17030634-17030653 None:intergenic 65.0%
! TGCCCTTCCCACTTGGTGGC+TGG + chr4_1:17030672-17030691 None:intergenic 65.0%
!! TGGTGGCGGCGAGCGAGTTG+CGG + chr4_1:17023604-17023623 None:intergenic 70.0%
AGATAAGGCGGCGGCGGTGG+TGG + chr4_1:17023621-17023640 None:intergenic 70.0%
TGGAGATAAGGCGGCGGCGG+TGG + chr4_1:17023624-17023643 None:intergenic 70.0%
CGGAGATCCCAGGTCCGACC+TGG + chr4_1:17024860-17024879 None:intergenic 70.0%
AGGCCTCCTGCCGAAGGACG+AGG - chr4_1:17026846-17026865 Msa0537950:intron 70.0%
GGCAAGCCAGAGGCCAGCTC+TGG - chr4_1:17030507-17030526 Msa0537950:intron 70.0%
TGGCGGCGAGCGAGTTGCGG+TGG + chr4_1:17023601-17023620 None:intergenic 75.0%
! TAAGGCGGCGGCGGTGGTGG+CGG + chr4_1:17023618-17023637 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 17023360 17031648 17023360 ID=Msa0537950;Name=Msa0537950
chr4_1 mRNA 17023360 17031648 17023360 ID=Msa0537950-mRNA-1;Parent=Msa0537950;Name=Msa0537950-mRNA-1;_AED=0.08;_eAED=0.08;_QI=362|0.8|0.68|1|0.66|0.56|16|385|882
chr4_1 exon 17023360 17024526 17023360 ID=Msa0537950-mRNA-1:exon:5045;Parent=Msa0537950-mRNA-1
chr4_1 exon 17025527 17025594 17025527 ID=Msa0537950-mRNA-1:exon:5044;Parent=Msa0537950-mRNA-1
chr4_1 exon 17025677 17025790 17025677 ID=Msa0537950-mRNA-1:exon:5043;Parent=Msa0537950-mRNA-1
chr4_1 exon 17025936 17025985 17025936 ID=Msa0537950-mRNA-1:exon:5042;Parent=Msa0537950-mRNA-1
chr4_1 exon 17026430 17026597 17026430 ID=Msa0537950-mRNA-1:exon:5041;Parent=Msa0537950-mRNA-1
chr4_1 exon 17026610 17026855 17026610 ID=Msa0537950-mRNA-1:exon:5040;Parent=Msa0537950-mRNA-1
chr4_1 exon 17026926 17027002 17026926 ID=Msa0537950-mRNA-1:exon:5039;Parent=Msa0537950-mRNA-1
chr4_1 exon 17027544 17027718 17027544 ID=Msa0537950-mRNA-1:exon:5038;Parent=Msa0537950-mRNA-1
chr4_1 exon 17027833 17027929 17027833 ID=Msa0537950-mRNA-1:exon:5037;Parent=Msa0537950-mRNA-1
chr4_1 exon 17028071 17028174 17028071 ID=Msa0537950-mRNA-1:exon:5036;Parent=Msa0537950-mRNA-1
chr4_1 exon 17028184 17028415 17028184 ID=Msa0537950-mRNA-1:exon:5035;Parent=Msa0537950-mRNA-1
chr4_1 exon 17028452 17028690 17028452 ID=Msa0537950-mRNA-1:exon:5034;Parent=Msa0537950-mRNA-1
chr4_1 exon 17029161 17029262 17029161 ID=Msa0537950-mRNA-1:exon:5033;Parent=Msa0537950-mRNA-1
chr4_1 exon 17029354 17029435 17029354 ID=Msa0537950-mRNA-1:exon:5032;Parent=Msa0537950-mRNA-1
chr4_1 exon 17031082 17031215 17031082 ID=Msa0537950-mRNA-1:exon:5031;Parent=Msa0537950-mRNA-1
chr4_1 exon 17031308 17031648 17031308 ID=Msa0537950-mRNA-1:exon:5030;Parent=Msa0537950-mRNA-1
chr4_1 five_prime_UTR 17031308 17031648 17031308 ID=Msa0537950-mRNA-1:five_prime_utr;Parent=Msa0537950-mRNA-1
chr4_1 five_prime_UTR 17031195 17031215 17031195 ID=Msa0537950-mRNA-1:five_prime_utr;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17031082 17031194 17031082 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17029354 17029435 17029354 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17029161 17029262 17029161 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17028452 17028690 17028452 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17028184 17028415 17028184 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17028071 17028174 17028071 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17027833 17027929 17027833 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17027544 17027718 17027544 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17026926 17027002 17026926 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17026610 17026855 17026610 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17026430 17026597 17026430 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17025936 17025985 17025936 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17025677 17025790 17025677 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17025527 17025594 17025527 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 CDS 17023745 17024526 17023745 ID=Msa0537950-mRNA-1:cds;Parent=Msa0537950-mRNA-1
chr4_1 three_prime_UTR 17023360 17023744 17023360 ID=Msa0537950-mRNA-1:three_prime_utr;Parent=Msa0537950-mRNA-1
Gene Sequence

>Msa0537950

ATGGAGTCAAAGTGTTGCATGAACGTTGTTTGTGGAACCTCTACGTCGATTCGGTGGCGGAAAGGTTGGATTCTTCGATCCGGTGAATTTGCCGATCTATGTGATAAGTGCGGTTCTGCTTATGAGCAAACAGCTTTTTGCGATATGTTCCATGCAAAAGAATCTGGTTGGAGAGAGTGTACTTCATGTGGCAAGCGTCTCCATTGTGGATGTGTTGCTTCAAAGTCTCAGCTTGAAATACTTGACACTGGTGGTGTAAGCTGTATTACCTGTGCAAGTACTTCAGGACTTCAACCTATTGCTAGTAATGAAAAGCCTAATGAATCTGGAACAGCAAAAGTAAATAATGTCAGTTCCCAGCAGTGCATATCTCTGGCTAACCAATTAAATGTGAGGGGTATGCAAGTTGGGAATTATGCAGAAAATGATGGGATGAGGTACTGGCTCAAACCTCACAATGTTGATTTGGATGGACCTTCTAGAGAAATCAAACCAGAAGTTTTACCCTCTGTTGGAGAATTTGGAAGCACTTTGATGACTGGTAAAGCAGAGAATGACATGCAAGATATATATGAATCACTGGCACAGACAAATTTGAGTATGACCCTTACCGCTCCTTTGCCAAATCCCTTTCATAATGTCCTTGTTGATGAAAGGGAACAAAGCAAAATGTCACCTCCACTTCTATTGGCGTCTAGATCTCGTCATCTTTTACCTAAACCTCCTAGGCCAACTCTATCTCCAGGCTTAGAAGGAAACACAGGCATGATACGTATAGCAAGGCCTCCTGCCGAAGGACGAGGAAGGAATCAGTTGCTTCCGCGATATTGGCCCAGAATTACAGATCAAGAGTTGCAGCAAATATCGGGAGATTCAAATTCCACCATTGTGCCACTCTTTGAAAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTCTTCCAAAAGCATGTGCTGAAGCATATTTCCCTCCTATCTCTCAACCTGAGGGCCTTCCTTTGCGTATCCAAGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAATAATAGCAGGATGTATGTTTTAGAAGGGGTAACCCCCTGTATTCAGTCTATGCAACTGCAAGCTGGCGATACTGTAACATTTAGCCGTATGGACCCTGAGGGGAAACTTATAATGGGGTTCAGGAAGGCAACAAATTCTGCTTCAGTACAGGAAACTTTTCCGTCTAATATGCCCAATGGTTCTCATTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATATACCTATATTAAGTGGTTATTCTGGCCTTCTTCAGTCTCAAAAGGGTTGTTCAGAAACCCACCTAAATGCGCTCTCTAGAAAGTGGAACTCAGTTGGTGCTGACATGGATTGGCATAATGTAGAAATGCCTGAAAGCAGGAAAAGAGATGTGTTGTCTTTACCACCTGTGCTGAAAAGAACTCGAAATATTGGGTCAAAAAGTAAGAGGTTGCTTATTGATAGCGAGGATGCACTGGAGCTGAAACTTACTTGGGAAGAGGCTCAGGATTTACTTCGTCCACCTCCAGAAGTTAAGCCAAGTGTTGTCATGATCGAGGATCACTTATTTGAAGAGTATGAAGAGCCTCCTGTGTTTGGAAAGAAGAGTATATTTGTGGTACGATCTACTGGGATAAGTGAGCAGTGGACACAGTGTGATAGTTGCCAAAAATGGCGGAAGTTACCGGTTGATGTACTTATTCCCCCTAAGTGGACGTGTATGGAGAACTTTTGGGATCAAAGCAGGTGTTCATGTGCTGCTCCCAATGAATTGAATCCAAGGGAACTGGATAATCTTTTGAGAATGAACAATGAATTCAAGAAACAAAGACAAGCAGCGGCAAGCCAGAGGCCAGCTCTGGATCGTGAATCTTCTGGTCTTGATGCTTTAGCAAATGCTGCGGTACTTGGAGATGATGCAAGTGACTCTGGCAGGACACCAGTGTTGACCACAACAAGACACCCTCGTCATAGGCCTGGGTGCTCCTGTATTGTCTGTATCCAGCCACCAAGTGGGAAGGGCAAACACAAACCTACATGCACGTGTAATGTCTGCATGACAGTTAAACGCCGGTTTAAAACCCTGATGATGCGAAAGAAAAAGCGTCAATCTGAGCGCGAAGCTGAGATTGCTCAGAAAAATCAGCAATCATGGAGGACCAAGGATGAATCAGAAGTAGACAGCACCTCTCGACATTTAACTCCAGTTGATGGTTCGGAGAATGAAGCAAGAGGGCCAAATGAATTAGATTCAAGTAACCAAGACCAAGTGGCTGATGCTGCCAAGGGACAATTAGACTTGAATTGCCAACCGGATCGGGAAGACATGCAAGCTGGACCAAACACTCTGAGCATGATGACTCTTCTTGAAGAAGCAAATCTCCCGTTGGAGACATACCTGAAGCAAAATGGTCTTTCTAGCTTGATATCAGAGCAGCAAACAAATTCAGCTTCAAATGTGCAGGCACAGACAACCAATGAGAGTGAGGGAAGACAAAATGAGGATTGTTGTACTGCTTCTGCAGTTCATGAACAGGAAGACAGTCCTGAAGAGAATAGTGGGCAAGACAGAGACCAACACAATTCACTTTCTTGA
Protein sequence

>Msa0537950

MESKCCMNVVCGTSTSIRWRKGWILRSGEFADLCDKCGSAYEQTAFCDMFHAKESGWRECTSCGKRLHCGCVASKSQLEILDTGGVSCITCASTSGLQPIASNEKPNESGTAKVNNVSSQQCISLANQLNVRGMQVGNYAENDGMRYWLKPHNVDLDGPSREIKPEVLPSVGEFGSTLMTGKAENDMQDIYESLAQTNLSMTLTAPLPNPFHNVLVDEREQSKMSPPLLLASRSRHLLPKPPRPTLSPGLEGNTGMIRIARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATNSASVQETFPSNMPNGSHSSETSYSGVYENIPILSGYSGLLQSQKGCSETHLNALSRKWNSVGADMDWHNVEMPESRKRDVLSLPPVLKRTRNIGSKSKRLLIDSEDALELKLTWEEAQDLLRPPPEVKPSVVMIEDHLFEEYEEPPVFGKKSIFVVRSTGISEQWTQCDSCQKWRKLPVDVLIPPKWTCMENFWDQSRCSCAAPNELNPRELDNLLRMNNEFKKQRQAAASQRPALDRESSGLDALANAAVLGDDASDSGRTPVLTTTRHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQKNQQSWRTKDESEVDSTSRHLTPVDGSENEARGPNELDSSNQDQVADAAKGQLDLNCQPDREDMQAGPNTLSMMTLLEEANLPLETYLKQNGLSSLISEQQTNSASNVQAQTTNESEGRQNEDCCTASAVHEQEDSPEENSGQDRDQHNSLS*