AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0539230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539230 MtrunA17_Chr4g0029991 94.329 529 28 1 1 529 1 527 0.0 1043
Msa0539230 MtrunA17_Chr2g0291681 32.546 381 233 11 155 526 66 431 9.35e-57 198
Msa0539230 MtrunA17_Chr3g0103961 33.491 212 128 4 301 509 47 248 2.58e-35 133
Msa0539230 MtrunA17_Chr2g0301841 34.123 211 127 4 309 517 96 296 7.21e-35 133
Msa0539230 MtrunA17_Chr3g0103931 35.784 204 115 5 309 509 53 243 4.31e-34 130
Msa0539230 MtrunA17_Chr3g0103941 35.294 204 120 3 309 509 46 240 4.53e-34 129
Msa0539230 MtrunA17_Chr2g0301821 34.286 210 126 4 292 499 70 269 2.35e-32 125
Msa0539230 MtrunA17_Chr2g0301761 33.171 205 125 3 297 499 68 262 7.86e-29 115
Msa0539230 MtrunA17_Chr3g0103851 31.884 207 128 5 308 510 246 443 1.40e-28 118
Msa0539230 MtrunA17_Chr3g0103911 34.021 194 116 4 309 499 46 230 1.12e-27 111
Msa0539230 MtrunA17_Chr3g0104441 31.222 221 133 5 299 508 20 232 1.32e-27 112
Msa0539230 MtrunA17_Chr3g0103891 34.021 194 116 4 309 499 46 230 1.82e-27 110
Msa0539230 MtrunA17_Chr3g0104451 31.507 219 134 5 299 508 16 227 3.10e-27 110
Msa0539230 MtrunA17_Chr5g0425671 33.824 204 124 5 294 496 94 287 1.25e-26 110
Msa0539230 MtrunA17_Chr1g0206011 33.333 177 108 4 322 496 23 191 1.60e-26 106
Msa0539230 MtrunA17_Chr5g0434721 32.083 240 105 11 275 510 130 315 2.68e-26 109
Msa0539230 MtrunA17_Chr1g0206001 37.584 149 84 3 369 516 3 143 6.70e-26 103
Msa0539230 MtrunA17_Chr4g0031451 29.353 201 126 4 313 509 1 189 2.09e-25 103
Msa0539230 MtrunA17_Chr2g0301741 31.795 195 121 3 309 501 69 253 3.84e-25 105
Msa0539230 MtrunA17_Chr3g0103871 28.571 203 134 4 297 496 50 244 1.48e-23 100
Msa0539230 MtrunA17_Chr2g0301731 31.658 199 115 5 309 501 68 251 1.48e-23 100
Msa0539230 MtrunA17_Chr8g0344981 27.979 193 125 4 307 496 61 242 2.65e-21 94.4
Msa0539230 MtrunA17_Chr2g0301751 29.018 224 136 5 291 501 63 276 3.54e-20 90.9
Msa0539230 MtrunA17_Chr4g0031461 35.115 131 73 4 390 519 5 124 9.13e-20 85.5
Msa0539230 MtrunA17_Chr1g0164621 27.094 203 129 7 308 505 1244 1432 8.44e-19 90.9
Msa0539230 MtrunA17_Chr3g0082091 27.094 203 129 7 308 505 1242 1430 1.79e-18 89.7
Msa0539230 MtrunA17_Chr4g0031441 27.807 187 123 4 309 493 91 267 3.69e-18 85.5
Msa0539230 MtrunA17_Chr3g0103861 26.977 215 110 5 300 508 49 222 3.89e-17 81.3
Msa0539230 MtrunA17_Chr3g0123681 25.616 203 132 7 308 505 1522 1710 9.38e-16 81.3
Msa0539230 MtrunA17_Chr3g0103951 33.333 129 74 3 370 496 22 140 3.50e-14 70.1
Msa0539230 MtrunA17_Chr3g0100351 23.148 216 105 3 305 516 42 200 3.14e-13 68.9
Msa0539230 MtrunA17_Chr2g0329221 24.762 210 138 7 308 511 146 341 5.48e-11 65.5
Msa0539230 MtrunA17_Chr3g0110341 24.762 210 138 7 308 511 158 353 9.66e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539230 AT5G60250.1 41.509 530 279 9 27 530 1 525 4.33e-139 417
Msa0539230 AT2G25370.1 45.855 386 191 7 131 512 132 503 5.54e-104 325
Msa0539230 AT3G45580.1 41.322 363 198 4 156 517 29 377 1.56e-98 305
Msa0539230 AT2G25370.2 44.819 386 168 8 131 512 102 446 1.58e-95 301
Msa0539230 AT2G25360.1 43.605 344 175 5 210 550 1 328 6.72e-89 279
Msa0539230 AT5G37560.1 39.048 420 217 7 140 546 21 414 1.79e-86 275
Msa0539230 AT2G21420.1 39.846 389 201 8 131 512 21 383 8.51e-85 271
Msa0539230 AT2G26130.1 38.122 362 203 5 153 511 12 355 1.78e-78 253
Msa0539230 AT3G43750.1 39.943 348 188 6 152 496 10 339 8.80e-78 249
Msa0539230 AT3G45470.1 50.463 216 98 2 306 519 3 211 1.27e-69 223
Msa0539230 AT3G45540.1 43.321 277 147 4 236 508 25 295 9.89e-69 225
Msa0539230 AT3G45540.2 43.911 271 142 4 242 508 2 266 2.30e-68 223
Msa0539230 AT3G45460.1 33.858 381 220 6 131 510 5 354 4.27e-68 225
Msa0539230 AT3G45480.1 36.134 357 190 7 157 510 21 342 6.29e-68 224
Msa0539230 AT2G26135.1 36.544 353 187 6 157 508 29 345 7.01e-68 224
Msa0539230 AT2G19610.2 35.475 358 219 8 156 507 51 402 1.92e-66 222
Msa0539230 AT3G45570.1 38.387 310 170 7 157 461 18 311 1.34e-64 213
Msa0539230 AT2G19610.1 34.393 346 216 7 156 496 51 390 2.84e-61 207
Msa0539230 AT5G07640.1 37.459 307 184 6 157 460 9 310 3.01e-58 197
Msa0539230 AT3G45555.1 48.958 192 87 4 307 495 15 198 1.11e-50 173
Msa0539230 AT4G19670.2 32.552 384 238 11 150 524 54 425 1.46e-49 179
Msa0539230 AT4G19670.3 32.552 384 238 11 150 524 54 425 1.46e-49 179
Msa0539230 AT4G19670.5 32.552 384 238 11 150 524 54 425 1.46e-49 179
Msa0539230 AT4G19670.7 32.552 384 238 11 150 524 54 425 1.46e-49 179
Msa0539230 AT4G19670.4 32.552 384 238 11 150 524 54 425 1.46e-49 179
Msa0539230 AT4G19670.1 32.552 384 238 11 150 524 54 425 1.46e-49 179
Msa0539230 AT4G19670.6 32.552 384 238 11 150 524 54 425 1.46e-49 179
Msa0539230 AT3G45510.1 38.725 204 115 3 250 452 10 204 3.13e-40 147
Msa0539230 AT3G45560.1 32.000 275 166 6 156 425 13 271 2.63e-36 142
Msa0539230 AT3G53690.1 32.432 222 139 3 297 516 103 315 1.54e-34 133
Msa0539230 AT3G14250.1 29.911 224 143 4 297 514 83 298 1.01e-30 122
Msa0539230 AT3G45490.1 39.306 173 85 6 128 293 2 161 5.41e-22 94.7
Msa0539230 AT4G01020.1 27.228 202 127 6 309 505 1561 1747 2.60e-17 86.7
Msa0539230 AT5G10370.1 26.733 202 128 6 309 505 1564 1750 4.61e-17 85.9
Msa0539230 AT3G43180.1 38.835 103 54 3 272 373 30 124 1.12e-12 67.4
Msa0539230 AT1G05890.1 24.762 210 138 7 308 511 131 326 1.75e-12 70.5
Msa0539230 AT1G05890.2 24.762 210 138 7 308 511 173 368 1.94e-12 70.5
Msa0539230 AT2G31770.1 27.027 222 141 7 303 517 122 329 2.30e-12 70.1
Msa0539230 AT2G31510.1 23.396 265 171 10 257 511 89 331 2.77e-11 66.6
Msa0539230 AT2G31510.2 23.396 265 171 10 257 511 89 331 2.77e-11 66.6
Msa0539230 AT3G27710.1 26.887 212 138 6 309 515 121 320 3.22e-11 66.2
Msa0539230 AT1G65430.1 24.820 278 165 12 250 509 69 320 5.85e-11 65.5
Msa0539230 AT2G31510.3 23.396 265 171 10 257 511 17 259 9.11e-11 64.7

Find 144 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAAGCGTGTTATTTATTT+TGG 0.158679 4_1:-19949115 Msa0539230:CDS
TTGCCATTCTTTCGAGTTCT+TGG 0.189225 4_1:+19949551 None:intergenic
AGACTACTCCAAAAGTCTTA+TGG 0.234580 4_1:-19946951 Msa0539230:CDS
ACGATGATGGTCCGGTTGTT+AGG 0.253160 4_1:-19949339 Msa0539230:CDS
TTTGATATTGGAAATTTCTA+AGG 0.256945 4_1:-19949221 Msa0539230:CDS
GTTTGTTTATATGATTTAAT+AGG 0.269943 4_1:-19945045 Msa0539230:three_prime_UTR
CTCTGGCATCAAGGAGTCTT+TGG 0.274888 4_1:-19946781 Msa0539230:CDS
TACAGAACCCATAAGACTTT+TGG 0.276689 4_1:+19946943 None:intergenic
TTTGGGAAGAGGACAATATT+TGG 0.281754 4_1:-19945265 Msa0539230:CDS
GACTACTCCAAAAGTCTTAT+GGG 0.293590 4_1:-19946950 Msa0539230:CDS
TTGGTCAGTTAAGTGGAAAA+TGG 0.293607 4_1:-19947471 Msa0539230:intron
AACTTCTAGTTGACAGTTGC+CGG 0.294527 4_1:-19947102 Msa0539230:CDS
AGTCAAAGTCTTGTTGTTCT+TGG 0.295431 4_1:+19949773 None:intergenic
ACCTAGGTTTGGATTATTAC+TGG 0.305775 4_1:-19945135 Msa0539230:three_prime_UTR
GAAAATTGCTGTGGAGCTTA+TGG 0.307792 4_1:-19949176 Msa0539230:CDS
AAAGACGGCGGTGGAGGAGG+AGG 0.332308 4_1:+19949627 None:intergenic
TTTCAATGCTGTTATTGCTT+TGG 0.334453 4_1:-19949140 Msa0539230:CDS
GGTGAGAGTGTTTCTTTGGC+TGG 0.336538 4_1:-19949277 Msa0539230:CDS
TCGGATTCACGATCAGAAAA+TGG 0.341820 4_1:-19949464 Msa0539230:CDS
GAGAGGTGAGAGTGTTTCTT+TGG 0.346695 4_1:-19949281 Msa0539230:CDS
GGTCGCTACACTACTTAATA+AGG 0.351100 4_1:-19947431 Msa0539230:CDS
CAACATGCCGGAGGAGGATT+GGG 0.362792 4_1:-19949428 Msa0539230:CDS
AACATGTTCTTGTCCACTTT+GGG 0.363932 4_1:-19945282 Msa0539230:CDS
GGGAAGCGGAGAGGGCTTCT+TGG 0.365112 4_1:+19949668 None:intergenic
AAATCTTCTGATGGAGGGTT+AGG 0.366932 4_1:+19946815 None:intergenic
TGAAACTTGTGTCATTTGTT+TGG 0.367099 4_1:-19947263 Msa0539230:CDS
TTGTTCTTGGGTTGAGTCCA+TGG 0.371722 4_1:+19949786 None:intergenic
CAACATGTTCTTGTCCACTT+TGG 0.375533 4_1:-19945283 Msa0539230:CDS
GACGGCGGTGGAGGAGGAGG+AGG 0.379616 4_1:+19949630 None:intergenic
TTCTTTCGAGTTCTTGGAGC+TGG 0.381383 4_1:+19949557 None:intergenic
CTTCAGCAAGTTCAATCATA+TGG 0.382234 4_1:+19946738 None:intergenic
TGATGAGGATAATTTGATAT+TGG 0.382450 4_1:-19949233 Msa0539230:CDS
CGATGATGGTCCGGTTGTTA+GGG 0.383801 4_1:-19949338 Msa0539230:CDS
GAAATTTCTAAGGCTGTTGC+TGG 0.383989 4_1:-19949211 Msa0539230:CDS
GTCAAAGTCTTGTTGTTCTT+GGG 0.385156 4_1:+19949774 None:intergenic
AGACTTTGACTTCTTGTTAA+CGG 0.385702 4_1:-19949761 Msa0539230:CDS
TGACTAGCTTGACCTAGGTT+TGG 0.389684 4_1:-19945146 Msa0539230:three_prime_UTR
CGGAGGAGGATTGGGATGAA+TGG 0.401481 4_1:-19949420 Msa0539230:CDS
GAGCTTATGGCTTTGATTGA+AGG 0.406533 4_1:-19949163 Msa0539230:CDS
AGTGTTTCTTTGGCTGGGAT+TGG 0.411786 4_1:-19949271 Msa0539230:CDS
TGGTCAGTTAAGTGGAAAAT+GGG 0.412108 4_1:-19947470 Msa0539230:intron
TCAACATGCCGGAGGAGGAT+TGG 0.418288 4_1:-19949429 Msa0539230:CDS
GGAGGAGGATTGGGATGAAT+GGG 0.426045 4_1:-19949419 Msa0539230:CDS
GGAGGAAGGTTGGTCGATGA+GGG 0.427531 4_1:+19949648 None:intergenic
GGAGGATTGGGATGAATGGG+GGG 0.429305 4_1:-19949416 Msa0539230:CDS
TTAAAATAAACCCTAACAAC+CGG 0.430421 4_1:+19949328 None:intergenic
TTAAGTAGTGTAGCGACCTT+CGG 0.437588 4_1:+19947436 None:intergenic
TCATGCCTCGCCACAAGCCT+TGG 0.442248 4_1:+19947373 None:intergenic
AGGAGGATTGGGATGAATGG+GGG 0.445270 4_1:-19949417 Msa0539230:CDS
GACGAACTCCCTTCACCAAA+TGG 0.453109 4_1:+19949379 None:intergenic
TTCTTGTCCACTTTGGGAAG+AGG 0.461434 4_1:-19945276 Msa0539230:CDS
GGTCAAGCTAGTCAAGTTGC+CGG 0.465744 4_1:+19945155 None:intergenic
GTGAGAGTGTTTCTTTGGCT+GGG 0.465990 4_1:-19949276 Msa0539230:CDS
GAGGAGGATTGGGATGAATG+GGG 0.467507 4_1:-19949418 Msa0539230:CDS
CTCAAAATTTCGTTGCTGCA+TGG 0.468528 4_1:+19947051 None:intergenic
AGGAGGAAGGTTGGTCGATG+AGG 0.472445 4_1:+19949647 None:intergenic
TTCGAGAAAGACGGCGGTGG+AGG 0.476156 4_1:+19949621 None:intergenic
TTATTATTAGTATAAGTAAC+CGG 0.482116 4_1:-19945174 Msa0539230:exon
GACATCAGTGCAGAGCATCT+TGG 0.485705 4_1:+19946989 None:intergenic
GAGAAAGACGGCGGTGGAGG+AGG 0.492225 4_1:+19949624 None:intergenic
AGTGCAGAGCATCTTGGATA+AGG 0.492748 4_1:+19946995 None:intergenic
TTGAGAAACCATTTGGTGAA+GGG 0.498121 4_1:-19949387 Msa0539230:CDS
TTTGGTGAAGGGAGTTCGTC+GGG 0.501386 4_1:-19949376 Msa0539230:CDS
TTCAACTTAAAATCTTCTGA+TGG 0.501863 4_1:+19946806 None:intergenic
GTCGATGAGGGAAGCGGAGA+GGG 0.503652 4_1:+19949660 None:intergenic
GCTCCAAGAACTCGAAAGAA+TGG 0.504166 4_1:-19949554 Msa0539230:CDS
CAGGGAACAGTTACAGTCCA+TGG 0.505375 4_1:-19949803 None:intergenic
TGACATGTTATACCTACAAA+AGG 0.516724 4_1:-19946844 Msa0539230:CDS
TCGACGAGGCGGAACGATGA+TGG 0.516848 4_1:-19949352 Msa0539230:CDS
AACTTAAAATCTTCTGATGG+AGG 0.519846 4_1:+19946809 None:intergenic
AGTTGAAGTCTCTGGCATCA+AGG 0.520502 4_1:-19946790 Msa0539230:CDS
TGGCATCAAGGAGTCTTTGG+AGG 0.524698 4_1:-19946778 Msa0539230:CDS
GTTGAAAACGGAGTCGGAGA+TGG 0.525304 4_1:+19949591 None:intergenic
CATTCATCCCAATCCTCCTC+CGG 0.525580 4_1:+19949421 None:intergenic
ATTGTAAGCGAAATCGAGAT+CGG 0.531400 4_1:+19949699 None:intergenic
ACTTAAAATCTTCTGATGGA+GGG 0.531502 4_1:+19946810 None:intergenic
TTTGAGAAACCATTTGGTGA+AGG 0.531769 4_1:-19949388 Msa0539230:CDS
GAGGCGGAACGATGATGGTC+CGG 0.533783 4_1:-19949347 Msa0539230:CDS
GGCATGTTGGCACCATTCCA+TGG 0.534169 4_1:+19947146 None:intergenic
CATCCCTCATGAGGGCATGT+TGG 0.535618 4_1:+19947133 None:intergenic
TAAGGGTTTAGTGAGTGAGG+AGG 0.536413 4_1:-19949308 Msa0539230:CDS
AAAACGGAGTCGGAGATGGA+TGG 0.537187 4_1:+19949595 None:intergenic
CAGTTGATGGCTGTCAACAC+AGG 0.537949 4_1:-19947213 Msa0539230:CDS
ACTCACGGTGGCGGAATCCA+TGG 0.542089 4_1:-19949725 Msa0539230:CDS
GCTAGATTCAGCAGGCCTCA+TGG 0.542852 4_1:+19947303 None:intergenic
GGCGCAACGCCACGAACTCA+CGG 0.545514 4_1:-19949740 Msa0539230:CDS
TCATTCTTGCATCCCTCATG+AGG 0.546847 4_1:+19947124 None:intergenic
TGGCAATCGAGATGAACGAC+AGG 0.547361 4_1:-19949534 Msa0539230:CDS
ATTCCGCCACCGTGAGTTCG+TGG 0.547693 4_1:+19949731 None:intergenic
ACGCCACGAACTCACGGTGG+CGG 0.555818 4_1:-19949734 Msa0539230:CDS
GAGAGAGTTAGCGTTGAAAA+CGG 0.559178 4_1:+19949579 None:intergenic
ATTTGGTGAAGGGAGTTCGT+CGG 0.561209 4_1:-19949377 Msa0539230:CDS
AACTTGTGTCATTTGTTTGG+AGG 0.561454 4_1:-19947260 Msa0539230:CDS
CAACTTGACTAGCTTGACCT+AGG 0.564644 4_1:-19945151 Msa0539230:three_prime_UTR
TTTACACCGCTAGATTCAGC+AGG 0.565712 4_1:+19947295 None:intergenic
GTTTCGGCTGCAAGGTTCCG+TGG 0.568651 4_1:-19946877 Msa0539230:CDS
CTGTTGCTGGGAATGAAAGT+AGG 0.569002 4_1:-19949198 Msa0539230:CDS
GTTGCTACCACATGACATGC+AGG 0.571834 4_1:-19946715 Msa0539230:intron
GTCTTCGAGAAAGACGGCGG+TGG 0.574602 4_1:+19949618 None:intergenic
AAGAAATGTGTAAAATGTCA+TGG 0.575908 4_1:-19946908 Msa0539230:CDS
AGATCGTGATGATGATGAAG+AGG 0.576559 4_1:-19945237 Msa0539230:CDS
AAACGGAGTCGGAGATGGAT+GGG 0.577431 4_1:+19949596 None:intergenic
TTACTGCAGTCCAAGGCTTG+TGG 0.578524 4_1:-19947383 Msa0539230:CDS
TGTTGCTGTTTGTGATGATG+AGG 0.583207 4_1:-19949248 Msa0539230:CDS
AAATTTCTAAGGCTGTTGCT+GGG 0.584399 4_1:-19949210 Msa0539230:CDS
AATTTGCTTACTGCAGTCCA+AGG 0.585420 4_1:-19947390 Msa0539230:CDS
GAAATCGAGATCGGATTCCA+TGG 0.587184 4_1:+19949708 None:intergenic
ATATTGTCCTCTTCCCAAAG+TGG 0.589871 4_1:+19945269 None:intergenic
GAGGATTGGGATGAATGGGG+GGG 0.591215 4_1:-19949415 Msa0539230:CDS
GGACTACCGTTCTGATGAAG+AGG 0.592970 4_1:-19945216 Msa0539230:CDS
GTGAGTGAGGAGGTTGTGAG+AGG 0.594469 4_1:-19949298 Msa0539230:CDS
GGTGCCAACATGCCCTCATG+AGG 0.596754 4_1:-19947137 Msa0539230:CDS
GGATGGGTCTTCGAGAAAGA+CGG 0.604880 4_1:+19949612 None:intergenic
GGTGAAGTTGCTCCATGGAA+TGG 0.606666 4_1:-19947158 Msa0539230:CDS
CATTCTTGCATCCCTCATGA+GGG 0.608069 4_1:+19947125 None:intergenic
TGCAAGGTTCCGTGGCATAG+TGG 0.608373 4_1:-19946869 Msa0539230:CDS
AGGTTGGTCGATGAGGGAAG+CGG 0.613007 4_1:+19949654 None:intergenic
GTGGAGGTGAAGTTGCTCCA+TGG 0.619820 4_1:-19947163 Msa0539230:CDS
GGTCGATGAGGGAAGCGGAG+AGG 0.626159 4_1:+19949659 None:intergenic
GCAGTCCAAGGCTTGTGGCG+AGG 0.628647 4_1:-19947378 Msa0539230:CDS
TAAATGTGGAGCTGAGTGGA+GGG 0.630494 4_1:-19945315 Msa0539230:CDS
GGTATTGCTTGTCTTGCATG+AGG 0.631054 4_1:-19947192 Msa0539230:CDS
TGTAGTCCTCTTCATCAGAA+CGG 0.631179 4_1:+19945210 None:intergenic
CATATGATTGAACTTGCTGA+AGG 0.640994 4_1:-19946737 Msa0539230:CDS
GTTCGTCGGGTTCGACGAGG+CGG 0.642263 4_1:-19949363 Msa0539230:CDS
TCACGATCAGAAAATGGCGT+CGG 0.645867 4_1:-19949458 Msa0539230:CDS
ACCAGTAATAATCCAAACCT+AGG 0.646264 4_1:+19945134 None:intergenic
GTTAGCGTTGAAAACGGAGT+CGG 0.649356 4_1:+19949585 None:intergenic
GTCTTGCATGAGGCAACATG+TGG 0.659146 4_1:-19947182 Msa0539230:CDS
TAGAGTACCTGCATGTCATG+TGG 0.660971 4_1:+19946708 None:intergenic
TGAAAGTAGGAAAATTGCTG+TGG 0.668978 4_1:-19949185 Msa0539230:CDS
ATAAATGTGGAGCTGAGTGG+AGG 0.671440 4_1:-19945316 Msa0539230:CDS
TTGCATGAGGCAACATGTGG+AGG 0.673807 4_1:-19947179 Msa0539230:CDS
GCTATAAATGTGGAGCTGAG+TGG 0.679724 4_1:-19945319 Msa0539230:CDS
AGAAGGACGATCTCAACCGT+CGG 0.683370 4_1:-19949483 Msa0539230:CDS
ATGAGGCCTGCTGAATCTAG+CGG 0.684150 4_1:-19947301 Msa0539230:CDS
CATGTCATACCACTATGCCA+CGG 0.686231 4_1:+19946860 None:intergenic
GGAGTTCGTCGGGTTCGACG+AGG 0.688183 4_1:-19949366 Msa0539230:CDS
ATGGGCTTCGAAACAGCCGA+AGG 0.691008 4_1:-19947452 Msa0539230:CDS
CAATTGTTTCTCAATCCATG+AGG 0.697517 4_1:-19947318 Msa0539230:CDS
GTGCCAACATGCCCTCATGA+GGG 0.700338 4_1:-19947136 Msa0539230:CDS
TGGGTCTTCGAGAAAGACGG+CGG 0.730901 4_1:+19949615 None:intergenic
GGCAATCGAGATGAACGACA+GGG 0.746094 4_1:-19949533 Msa0539230:CDS
GCAACGCCACGAACTCACGG+TGG 0.773826 4_1:-19949737 Msa0539230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTGTATTATTTAATTATTT+TGG - chr4_1:19949134-19949153 Msa0539230:CDS 10.0%
!! GTGCAAAATAAAATAAAAAA+TGG - chr4_1:19945953-19945972 Msa0539230:intron 15.0%
!!! TTCATAATTTATTTTCATGT+TGG + chr4_1:19946216-19946235 None:intergenic 15.0%
!! TATAAATGATAACATTATAG+AGG - chr4_1:19946291-19946310 Msa0539230:intron 15.0%
!! ATAAATGATAACATTATAGA+GGG - chr4_1:19946292-19946311 Msa0539230:intron 15.0%
!!! TTATGTCCATTTTATTTTTT+AGG - chr4_1:19947085-19947104 Msa0539230:CDS 15.0%
!!! TTTTTAACATCTTGTTTTAT+TGG - chr4_1:19947343-19947362 Msa0539230:CDS 15.0%
!!! ATATTTTTTATCAAGTTATC+TGG - chr4_1:19948259-19948278 Msa0539230:intron 15.0%
!! TTATTATTAGTATAAGTAAC+CGG - chr4_1:19949659-19949678 Msa0539230:CDS 15.0%
!! GTTTGTTTATATGATTTAAT+AGG - chr4_1:19949788-19949807 Msa0539230:exon 15.0%
!! TTTGATATTGGAAATTTCTA+AGG - chr4_1:19945612-19945631 Msa0539230:intron 20.0%
!! TTTATCCTACAATTAAACTA+GGG + chr4_1:19945847-19945866 None:intergenic 20.0%
!! AATAAGAAGAATAGATAAGA+TGG - chr4_1:19946402-19946421 Msa0539230:intron 20.0%
!! TATTGAATTGGATAGAAATA+TGG - chr4_1:19946497-19946516 Msa0539230:intron 20.0%
!! TATGAACCATAATATATGTA+TGG - chr4_1:19946680-19946699 Msa0539230:intron 20.0%
!! TAATGACCATACATATATTA+TGG + chr4_1:19946689-19946708 None:intergenic 20.0%
!! TCAAAATGACAAAAGATAAT+TGG - chr4_1:19946796-19946815 Msa0539230:CDS 20.0%
!! GACAAAAAAAAAAAAGTGAT+TGG - chr4_1:19946835-19946854 Msa0539230:CDS 20.0%
!! AACAGTCCTAAAAAATAAAA+TGG + chr4_1:19947094-19947113 None:intergenic 20.0%
!! TGAAACTTTATAATGCTTAT+TGG - chr4_1:19947147-19947166 Msa0539230:CDS 20.0%
!!! CTTTTTATTTTTAGGAAGAA+AGG + chr4_1:19948210-19948229 None:intergenic 20.0%
!! TTCCTAAAAATAAAAAGTCA+GGG - chr4_1:19948213-19948232 Msa0539230:intron 20.0%
!! ATATTAGTTATTGCAATTGA+AGG - chr4_1:19948732-19948751 Msa0539230:intron 20.0%
!! ATAATACACTCAAAGTTTAA+AGG + chr4_1:19949124-19949143 None:intergenic 20.0%
!! ATAATTACAGATGGAAATTA+AGG - chr4_1:19949274-19949293 Msa0539230:CDS 20.0%
!!! GGAAAAGTATTATTTTTTGA+TGG - chr4_1:19949747-19949766 Msa0539230:CDS 20.0%
! TTAAAATAAACCCTAACAAC+CGG + chr4_1:19945508-19945527 None:intergenic 25.0%
!!! GTTGTTAGGGTTTATTTTAA+GGG - chr4_1:19945508-19945527 Msa0539230:intron 25.0%
! TGATGAGGATAATTTGATAT+TGG - chr4_1:19945600-19945619 Msa0539230:intron 25.0%
!!! TTGAAGCGTGTTATTTATTT+TGG - chr4_1:19945718-19945737 Msa0539230:intron 25.0%
! CTTTATCCTACAATTAAACT+AGG + chr4_1:19945848-19945867 None:intergenic 25.0%
! ATACATTGTTATGCTAAACT+TGG - chr4_1:19945882-19945901 Msa0539230:intron 25.0%
!!! TATTTTATTTTGCACACACA+AGG + chr4_1:19945948-19945967 None:intergenic 25.0%
!! AAAGTACCATTCAAGTTAAA+GGG - chr4_1:19946124-19946143 Msa0539230:intron 25.0%
!! AGTTAAAGGGTGAATTTTAT+CGG - chr4_1:19946137-19946156 Msa0539230:intron 25.0%
! TGTTATATGGAACAAATTGT+TGG - chr4_1:19946179-19946198 Msa0539230:intron 25.0%
! GTTATATGGAACAAATTGTT+GGG - chr4_1:19946180-19946199 Msa0539230:intron 25.0%
! AATTATGAATAGTAGAGATG+AGG - chr4_1:19946227-19946246 Msa0539230:intron 25.0%
! AGATCTAGAGATTATTGAAT+TGG - chr4_1:19946485-19946504 Msa0539230:intron 25.0%
! AATGACAAAAGATAATTGGA+TGG - chr4_1:19946800-19946819 Msa0539230:CDS 25.0%
! ATAACGCTTATTGATAAGTT+AGG - chr4_1:19947211-19947230 Msa0539230:CDS 25.0%
!!! GATAATGTTGTCTTTTTTTG+TGG - chr4_1:19947317-19947336 Msa0539230:CDS 25.0%
!!! AGTCAATTTTTTTCAGTTGA+TGG - chr4_1:19947607-19947626 Msa0539230:intron 25.0%
!!! ATTTTGAAGTCAAGAATTTC+CGG + chr4_1:19947753-19947772 None:intergenic 25.0%
!! TGACATTTTACACATTTCTT+GGG + chr4_1:19947925-19947944 None:intergenic 25.0%
!! ATGACATTTTACACATTTCT+TGG + chr4_1:19947926-19947945 None:intergenic 25.0%
! AAGAAATGTGTAAAATGTCA+TGG - chr4_1:19947925-19947944 Msa0539230:intron 25.0%
! TTCAACTTAAAATCTTCTGA+TGG + chr4_1:19948030-19948049 None:intergenic 25.0%
! CTTCCTAAAAATAAAAAGTC+AGG - chr4_1:19948212-19948231 Msa0539230:intron 25.0%
! GCAAAAGAAAAATATCATTC+AGG + chr4_1:19948529-19948548 None:intergenic 25.0%
! ATTGTTAACCATTGAATACT+GGG + chr4_1:19948638-19948657 None:intergenic 25.0%
! AATTGTTAACCATTGAATAC+TGG + chr4_1:19948639-19948658 None:intergenic 25.0%
! CACATACATACATAAAGTAT+GGG + chr4_1:19948669-19948688 None:intergenic 25.0%
! ACACATACATACATAAAGTA+TGG + chr4_1:19948670-19948689 None:intergenic 25.0%
!! TTTTCTAATTGATACTGATC+AGG - chr4_1:19948948-19948967 Msa0539230:intron 25.0%
!! AATTTTATGTGTATTGTGAG+AGG - chr4_1:19949240-19949259 Msa0539230:CDS 25.0%
! TAAGGAAAGATTATTTGACA+AGG - chr4_1:19949292-19949311 Msa0539230:CDS 25.0%
! GTGTTTATAATCACAACATT+TGG - chr4_1:19949403-19949422 Msa0539230:CDS 25.0%
! AACCATGTATAATGATAACA+TGG + chr4_1:19949452-19949471 None:intergenic 25.0%
!!! TTCGAATTTTGCTATAAATG+TGG - chr4_1:19949504-19949523 Msa0539230:CDS 25.0%
!!! TTTTGATGGATTTTTTGCAA+TGG - chr4_1:19949761-19949780 Msa0539230:CDS 25.0%
! AGACTTTGACTTCTTGTTAA+CGG - chr4_1:19945072-19945091 Msa0539230:three_prime_UTR 30.0%
!! GGTAATTTTGAGAAACCATT+TGG - chr4_1:19945439-19945458 Msa0539230:intron 30.0%
!!! GGTTGTTAGGGTTTATTTTA+AGG - chr4_1:19945507-19945526 Msa0539230:intron 30.0%
TTTCAATGCTGTTATTGCTT+TGG - chr4_1:19945693-19945712 Msa0539230:intron 30.0%
TAAACCATTGAATTCAAGCT+GGG - chr4_1:19946059-19946078 Msa0539230:intron 30.0%
!! CTTTAACTTGAATGGTACTT+TGG + chr4_1:19946125-19946144 None:intergenic 30.0%
! CAAAGTACCATTCAAGTTAA+AGG - chr4_1:19946123-19946142 Msa0539230:intron 30.0%
!! AATTCACCCTTTAACTTGAA+TGG + chr4_1:19946133-19946152 None:intergenic 30.0%
TTTGTTCCATATAACATCGT+CGG + chr4_1:19946175-19946194 None:intergenic 30.0%
TGGTAAATGATAGAGCTTTA+TGG - chr4_1:19946517-19946536 Msa0539230:intron 30.0%
TTCCATATTATAGCAGTTAC+CGG + chr4_1:19947037-19947056 None:intergenic 30.0%
!!! GGACTGTTTTTGTTTTAATG+TGG - chr4_1:19947106-19947125 Msa0539230:CDS 30.0%
!!! AATGTTGTCTTTTTTTGTGG+AGG - chr4_1:19947320-19947339 Msa0539230:CDS 30.0%
!! TGTTTTATTGGTCAGTTAAG+TGG - chr4_1:19947355-19947374 Msa0539230:CDS 30.0%
!! TGAAACTTGTGTCATTTGTT+TGG - chr4_1:19947570-19947589 Msa0539230:intron 30.0%
! CAGTAAATTTTCTCAGTAAC+TGG + chr4_1:19947817-19947836 None:intergenic 30.0%
TGACATGTTATACCTACAAA+AGG - chr4_1:19947989-19948008 Msa0539230:intron 30.0%
ACTTAAAATCTTCTGATGGA+GGG + chr4_1:19948026-19948045 None:intergenic 30.0%
AACTTAAAATCTTCTGATGG+AGG + chr4_1:19948027-19948046 None:intergenic 30.0%
!!! AGATTTTAAGTTGAAGTCTC+TGG - chr4_1:19948035-19948054 Msa0539230:intron 30.0%
!!! CTCCCTGACTTTTTATTTTT+AGG + chr4_1:19948218-19948237 None:intergenic 30.0%
TGTGATGAGCAAGTATTATT+TGG - chr4_1:19948297-19948316 Msa0539230:intron 30.0%
GTGATGAGCAAGTATTATTT+GGG - chr4_1:19948298-19948317 Msa0539230:intron 30.0%
!! TTGGGATTTAATTTGCTTAC+TGG - chr4_1:19948316-19948335 Msa0539230:intron 30.0%
! AGCCTCATGTTTTCTATTAA+CGG - chr4_1:19948369-19948388 Msa0539230:intron 30.0%
AACCGTTAATAGAAAACATG+AGG + chr4_1:19948374-19948393 None:intergenic 30.0%
TGAACATGTATAACATAACG+TGG + chr4_1:19948423-19948442 None:intergenic 30.0%
ATTGCAATTGAAGGATTCTA+CGG - chr4_1:19948741-19948760 Msa0539230:intron 30.0%
!!! TTCGAGTGATTTTTAAGTGT+CGG + chr4_1:19948771-19948790 None:intergenic 30.0%
!!! TTCAGGATATTTTCAAGTTC+TGG - chr4_1:19949047-19949066 Msa0539230:intron 30.0%
! AAAGGTATACATGATTTCAG+TGG + chr4_1:19949106-19949125 None:intergenic 30.0%
CCATATAGTATAAACAGTAG+CGG + chr4_1:19949185-19949204 None:intergenic 30.0%
GGAAAATATATCTAGTTGTC+AGG - chr4_1:19949313-19949332 Msa0539230:CDS 30.0%
AGTTTACAGATTTCCATGAA+TGG - chr4_1:19949365-19949384 Msa0539230:CDS 30.0%
! GCTTGTTGCTAATTTATTTG+TGG - chr4_1:19949425-19949444 Msa0539230:CDS 30.0%
GTCCATGTTATCATTATACA+TGG - chr4_1:19949447-19949466 Msa0539230:CDS 30.0%
!! GTCAAAGTCTTGTTGTTCTT+GGG + chr4_1:19945062-19945081 None:intergenic 35.0%
!! AGTCAAAGTCTTGTTGTTCT+TGG + chr4_1:19945063-19945082 None:intergenic 35.0%
ATTGTAAGCGAAATCGAGAT+CGG + chr4_1:19945137-19945156 None:intergenic 35.0%
AAAAACAATGCGTGAAGAGA+AGG - chr4_1:19945333-19945352 Msa0539230:CDS 35.0%
! TTTGAGAAACCATTTGGTGA+AGG - chr4_1:19945445-19945464 Msa0539230:intron 35.0%
! TTGAGAAACCATTTGGTGAA+GGG - chr4_1:19945446-19945465 Msa0539230:intron 35.0%
!! TTTTAAGGGTTTAGTGAGTG+AGG - chr4_1:19945522-19945541 Msa0539230:intron 35.0%
!! AAATTTCTAAGGCTGTTGCT+GGG - chr4_1:19945623-19945642 Msa0539230:intron 35.0%
TGAAAGTAGGAAAATTGCTG+TGG - chr4_1:19945648-19945667 Msa0539230:intron 35.0%
ATGCACCCTAGTTTAATTGT+AGG - chr4_1:19945839-19945858 Msa0539230:intron 35.0%
!! TTATTTTGCACACACAAGGA+GGG + chr4_1:19945944-19945963 None:intergenic 35.0%
!!! TTTATTTTGCACACACAAGG+AGG + chr4_1:19945945-19945964 None:intergenic 35.0%
! ATGGAATGTGTTGTTGTGTT+TGG - chr4_1:19945972-19945991 Msa0539230:intron 35.0%
! TGGAATGTGTTGTTGTGTTT+GGG - chr4_1:19945973-19945992 Msa0539230:intron 35.0%
GTAAACCATTGAATTCAAGC+TGG - chr4_1:19946058-19946077 Msa0539230:intron 35.0%
GATAACATTATAGAGGGAGT+TGG - chr4_1:19946298-19946317 Msa0539230:intron 35.0%
GAAGATAGACTTAGGTGATT+TGG - chr4_1:19946349-19946368 Msa0539230:intron 35.0%
GAGAATACTCAAATCACTAG+AGG - chr4_1:19946424-19946443 Msa0539230:intron 35.0%
ATAAGTCGAGATTCAAACCA+TGG - chr4_1:19946604-19946623 Msa0539230:intron 35.0%
! ACAGAGTGATTTGTGTTGAT+TGG - chr4_1:19946937-19946956 Msa0539230:CDS 35.0%
ACCATGTACATAATTCGAAC+CGG - chr4_1:19947015-19947034 Msa0539230:CDS 35.0%
AACCGGTAACTGCTATAATA+TGG - chr4_1:19947032-19947051 Msa0539230:CDS 35.0%
AAAGTACAATTCAAGCCAAG+TGG + chr4_1:19947256-19947275 None:intergenic 35.0%
! TTGATGCGTGTTTAAGATGA+TGG - chr4_1:19947278-19947297 Msa0539230:CDS 35.0%
! TGATGCGTGTTTAAGATGAT+GGG - chr4_1:19947279-19947298 Msa0539230:CDS 35.0%
TTGGTCAGTTAAGTGGAAAA+TGG - chr4_1:19947362-19947381 Msa0539230:CDS 35.0%
TGGTCAGTTAAGTGGAAAAT+GGG - chr4_1:19947363-19947382 Msa0539230:CDS 35.0%
! CAATTGTTTCTCAATCCATG+AGG - chr4_1:19947515-19947534 Msa0539230:intron 35.0%
!! AACTTGTGTCATTTGTTTGG+AGG - chr4_1:19947573-19947592 Msa0539230:intron 35.0%
AGACTACTCCAAAAGTCTTA+TGG - chr4_1:19947882-19947901 Msa0539230:intron 35.0%
! GACTACTCCAAAAGTCTTAT+GGG - chr4_1:19947883-19947902 Msa0539230:intron 35.0%
! TACAGAACCCATAAGACTTT+TGG + chr4_1:19947893-19947912 None:intergenic 35.0%
! TGTCATGGTCTTTTCTGTTT+CGG - chr4_1:19947940-19947959 Msa0539230:intron 35.0%
! GTTAGGATTCAACCTTTTGT+AGG + chr4_1:19948004-19948023 None:intergenic 35.0%
CTTCAGCAAGTTCAATCATA+TGG + chr4_1:19948098-19948117 None:intergenic 35.0%
!! CATATGATTGAACTTGCTGA+AGG - chr4_1:19948096-19948115 Msa0539230:intron 35.0%
TGCATAAAAATGCTTGACCA+AGG + chr4_1:19948485-19948504 None:intergenic 35.0%
! CAAGCATTTTTATGCAAGTC+AGG - chr4_1:19948489-19948508 Msa0539230:intron 35.0%
CCTTATAGTTATGTGTGCAA+TGG + chr4_1:19948556-19948575 None:intergenic 35.0%
CCATTGCACACATAACTATA+AGG - chr4_1:19948553-19948572 Msa0539230:intron 35.0%
TGACATTGAACTTCTTCCAA+GGG + chr4_1:19948817-19948836 None:intergenic 35.0%
TGTCTCACTCATCAAAACAA+GGG + chr4_1:19948841-19948860 None:intergenic 35.0%
!!! TTCCTTTCCTTTTTTCGCAT+TGG + chr4_1:19948879-19948898 None:intergenic 35.0%
AGGTCATCATCTCACTTATT+AGG - chr4_1:19948968-19948987 Msa0539230:intron 35.0%
TCATCTCACTTATTAGGTCA+AGG - chr4_1:19948974-19948993 Msa0539230:intron 35.0%
GAAACTCCAATGACAATTCA+AGG + chr4_1:19949030-19949049 None:intergenic 35.0%
TGAATTGTCATTGGAGTTTC+AGG - chr4_1:19949030-19949049 Msa0539230:intron 35.0%
GATTTCAGTGGCAAAATCTA+CGG + chr4_1:19949094-19949113 None:intergenic 35.0%
CCGCTACTGTTTATACTATA+TGG - chr4_1:19949182-19949201 Msa0539230:CDS 35.0%
GAGGTTGCTATAATTACAGA+TGG - chr4_1:19949265-19949284 Msa0539230:CDS 35.0%
! TCATATGTTGATTGCAGATG+CGG - chr4_1:19949480-19949499 Msa0539230:CDS 35.0%
AACATGTTCTTGTCCACTTT+GGG - chr4_1:19949551-19949570 Msa0539230:CDS 35.0%
TTTGGGAAGAGGACAATATT+TGG - chr4_1:19949568-19949587 Msa0539230:CDS 35.0%
ACCTAGGTTTGGATTATTAC+TGG - chr4_1:19949698-19949717 Msa0539230:CDS 35.0%
ACCAGTAATAATCCAAACCT+AGG + chr4_1:19949702-19949721 None:intergenic 35.0%
! GAGAGAGTTAGCGTTGAAAA+CGG + chr4_1:19945257-19945276 None:intergenic 40.0%
!! TTGCCATTCTTTCGAGTTCT+TGG + chr4_1:19945285-19945304 None:intergenic 40.0%
! TTTTCTGATCGTGAATCCGA+CGG + chr4_1:19945369-19945388 None:intergenic 40.0%
TCGGATTCACGATCAGAAAA+TGG - chr4_1:19945369-19945388 Msa0539230:intron 40.0%
!! TGTTGCTGTTTGTGATGATG+AGG - chr4_1:19945585-19945604 Msa0539230:intron 40.0%
!! GAAATTTCTAAGGCTGTTGC+TGG - chr4_1:19945622-19945641 Msa0539230:intron 40.0%
GAAAATTGCTGTGGAGCTTA+TGG - chr4_1:19945657-19945676 Msa0539230:intron 40.0%
!! GAGCTTATGGCTTTGATTGA+AGG - chr4_1:19945670-19945689 Msa0539230:intron 40.0%
ACTTGGACATACACAATGAG+AGG - chr4_1:19945899-19945918 Msa0539230:intron 40.0%
! TATTTTGCACACACAAGGAG+GGG + chr4_1:19945943-19945962 None:intergenic 40.0%
TGTTGTGTTTGGGAGAAGAT+TGG - chr4_1:19945983-19946002 Msa0539230:intron 40.0%
GTAAGACCGACGATGTTATA+TGG - chr4_1:19946166-19946185 Msa0539230:intron 40.0%
! AGCACCTATAGTGGAAAAGA+TGG - chr4_1:19946324-19946343 Msa0539230:intron 40.0%
! ACCTATAGTGGAAAAGATGG+TGG - chr4_1:19946327-19946346 Msa0539230:intron 40.0%
! TCCACCATCTTTTCCACTAT+AGG + chr4_1:19946331-19946350 None:intergenic 40.0%
!! AGATGGTGGAAGATAGACTT+AGG - chr4_1:19946341-19946360 Msa0539230:intron 40.0%
TACTCAAATCACTAGAGGCA+AGG - chr4_1:19946429-19946448 Msa0539230:intron 40.0%
ACTCAAATCACTAGAGGCAA+GGG - chr4_1:19946430-19946449 Msa0539230:intron 40.0%
! CTTATCCCACTAAGTTGGAT+CGG + chr4_1:19946562-19946581 None:intergenic 40.0%
TCGAGATTCAAACCATGGAT+TGG - chr4_1:19946609-19946628 Msa0539230:intron 40.0%
!! AGATTCAAACCATGGATTGG+AGG - chr4_1:19946612-19946631 Msa0539230:intron 40.0%
! TGATTGGCTACAGAAAGTTC+AGG - chr4_1:19946851-19946870 Msa0539230:CDS 40.0%
GAAAGTTCAGGTGTGAAAGT+TGG - chr4_1:19946863-19946882 Msa0539230:CDS 40.0%
!! ACCGGTTCGAATTATGTACA+TGG + chr4_1:19947019-19947038 None:intergenic 40.0%
! AAGTTAGGAGCATGTGTTCT+TGG - chr4_1:19947226-19947245 Msa0539230:CDS 40.0%
TTAAGTAGTGTAGCGACCTT+CGG + chr4_1:19947400-19947419 None:intergenic 40.0%
GGTCGCTACACTACTTAATA+AGG - chr4_1:19947402-19947421 Msa0539230:CDS 40.0%
! AATTTGCTTACTGCAGTCCA+AGG - chr4_1:19947443-19947462 Msa0539230:CDS 40.0%
! AACTTCTAGTTGACAGTTGC+CGG - chr4_1:19947731-19947750 Msa0539230:intron 40.0%
CTCAAAATTTCGTTGCTGCA+TGG + chr4_1:19947785-19947804 None:intergenic 40.0%
! CATGCAGCAACGAAATTTTG+AGG - chr4_1:19947783-19947802 Msa0539230:intron 40.0%
AAATCTTCTGATGGAGGGTT+AGG + chr4_1:19948021-19948040 None:intergenic 40.0%
GCTCATCACATCATATGACT+CGG + chr4_1:19948287-19948306 None:intergenic 40.0%
GACATTGAACTTCTTCCAAG+GGG + chr4_1:19948816-19948835 None:intergenic 40.0%
GTGACATTGAACTTCTTCCA+AGG + chr4_1:19948818-19948837 None:intergenic 40.0%
GTCTCACTCATCAAAACAAG+GGG + chr4_1:19948840-19948859 None:intergenic 40.0%
CTGTCTCACTCATCAAAACA+AGG + chr4_1:19948842-19948861 None:intergenic 40.0%
GAGTGAGACAGTGATTTGAT+TGG - chr4_1:19948851-19948870 Msa0539230:intron 40.0%
!! ATTGGTGCCAATGCGAAAAA+AGG - chr4_1:19948869-19948888 Msa0539230:intron 40.0%
TGCCAATGCGAAAAAAGGAA+AGG - chr4_1:19948874-19948893 Msa0539230:intron 40.0%
! CAAATATGAGTCGAGTGTTG+AGG - chr4_1:19948901-19948920 Msa0539230:intron 40.0%
AGGTACCCACCAAAAGTAAA+AGG + chr4_1:19949010-19949029 None:intergenic 40.0%
TGGGTACCTTGAATTGTCAT+TGG - chr4_1:19949021-19949040 Msa0539230:intron 40.0%
TTTGGCCCCTTCAAAGAAAT+CGG - chr4_1:19949152-19949171 Msa0539230:CDS 40.0%
ATGTGTATTGTGAGAGGAAG+AGG - chr4_1:19949246-19949265 Msa0539230:CDS 40.0%
!! ATGACTTGCTTTGCCATTCA+TGG + chr4_1:19949381-19949400 None:intergenic 40.0%
TGAATGGCAAAGCAAGTCAT+TGG - chr4_1:19949381-19949400 Msa0539230:CDS 40.0%
CTGCAATCAACATATGAGCA+AGG + chr4_1:19949477-19949496 None:intergenic 40.0%
! CATATGTTGATTGCAGATGC+GGG - chr4_1:19949481-19949500 Msa0539230:CDS 40.0%
CAACATGTTCTTGTCCACTT+TGG - chr4_1:19949550-19949569 Msa0539230:CDS 40.0%
ATATTGTCCTCTTCCCAAAG+TGG + chr4_1:19949567-19949586 None:intergenic 40.0%
! AGATCGTGATGATGATGAAG+AGG - chr4_1:19949596-19949615 Msa0539230:CDS 40.0%
TGTAGTCCTCTTCATCAGAA+CGG + chr4_1:19949626-19949645 None:intergenic 40.0%
!! TTGTTCTTGGGTTGAGTCCA+TGG + chr4_1:19945050-19945069 None:intergenic 45.0%
GAAATCGAGATCGGATTCCA+TGG + chr4_1:19945128-19945147 None:intergenic 45.0%
! GTTAGCGTTGAAAACGGAGT+CGG + chr4_1:19945251-19945270 None:intergenic 45.0%
!! TTCTTTCGAGTTCTTGGAGC+TGG + chr4_1:19945279-19945298 None:intergenic 45.0%
GCTCCAAGAACTCGAAAGAA+TGG - chr4_1:19945279-19945298 Msa0539230:CDS 45.0%
TCACGATCAGAAAATGGCGT+CGG - chr4_1:19945375-19945394 Msa0539230:intron 45.0%
! GTCGGAGATTTTCAACATGC+CGG - chr4_1:19945393-19945412 Msa0539230:intron 45.0%
! ATTTGGTGAAGGGAGTTCGT+CGG - chr4_1:19945456-19945475 Msa0539230:intron 45.0%
TAAGGGTTTAGTGAGTGAGG+AGG - chr4_1:19945525-19945544 Msa0539230:intron 45.0%
!! GAGAGGTGAGAGTGTTTCTT+TGG - chr4_1:19945552-19945571 Msa0539230:intron 45.0%
!! GTGAGAGTGTTTCTTTGGCT+GGG - chr4_1:19945557-19945576 Msa0539230:intron 45.0%
AGTGTTTCTTTGGCTGGGAT+TGG - chr4_1:19945562-19945581 Msa0539230:intron 45.0%
CTGTTGCTGGGAATGAAAGT+AGG - chr4_1:19945635-19945654 Msa0539230:intron 45.0%
! ATTTTGCACACACAAGGAGG+GGG + chr4_1:19945942-19945961 None:intergenic 45.0%
ACCATTGAATTCAAGCTGGG+TGG - chr4_1:19946062-19946081 Msa0539230:intron 45.0%
ACCACCCAGCTTGAATTCAA+TGG + chr4_1:19946066-19946085 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr4_1:19946071-19946090 Msa0539230:intron 45.0%
TGGGTGGTTGAAATGGAAGA+GGG - chr4_1:19946078-19946097 Msa0539230:intron 45.0%
ATGAGTAGTGAGACTGGAAG+AGG - chr4_1:19946262-19946281 Msa0539230:intron 45.0%
AGTTGGAGTAGCACCTATAG+TGG - chr4_1:19946315-19946334 Msa0539230:intron 45.0%
! ACTAAGTTGGATCGGCTACA+TGG + chr4_1:19946554-19946573 None:intergenic 45.0%
ATGTAGCCGATCCAACTTAG+TGG - chr4_1:19946553-19946572 Msa0539230:intron 45.0%
TGTAGCCGATCCAACTTAGT+GGG - chr4_1:19946554-19946573 Msa0539230:intron 45.0%
CGATCCAACTTAGTGGGATA+AGG - chr4_1:19946560-19946579 Msa0539230:intron 45.0%
! CAAGCCTTATCCCACTAAGT+TGG + chr4_1:19946567-19946586 None:intergenic 45.0%
CAACTTAGTGGGATAAGGCT+TGG - chr4_1:19946565-19946584 Msa0539230:intron 45.0%
AATACACGTCCTCCAATCCA+TGG + chr4_1:19946624-19946643 None:intergenic 45.0%
TGTGTTCTTGGAATGCCACT+TGG - chr4_1:19947238-19947257 Msa0539230:CDS 45.0%
TTTACACCGCTAGATTCAGC+AGG + chr4_1:19947541-19947560 None:intergenic 45.0%
GGTATTGCTTGTCTTGCATG+AGG - chr4_1:19947641-19947660 Msa0539230:intron 45.0%
CATTCTTGCATCCCTCATGA+GGG + chr4_1:19947711-19947730 None:intergenic 45.0%
TCATTCTTGCATCCCTCATG+AGG + chr4_1:19947712-19947731 None:intergenic 45.0%
! AGTGCAGAGCATCTTGGATA+AGG + chr4_1:19947841-19947860 None:intergenic 45.0%
! TCTTTTCTGTTTCGGCTGCA+AGG - chr4_1:19947948-19947967 Msa0539230:intron 45.0%
CATGTCATACCACTATGCCA+CGG + chr4_1:19947976-19947995 None:intergenic 45.0%
AGTTGAAGTCTCTGGCATCA+AGG - chr4_1:19948043-19948062 Msa0539230:intron 45.0%
! TAGAGTACCTGCATGTCATG+TGG + chr4_1:19948128-19948147 None:intergenic 45.0%
ACTGGAGCTCCCTTATAAAC+AGG - chr4_1:19948334-19948353 Msa0539230:intron 45.0%
CTGGAGCTCCCTTATAAACA+GGG - chr4_1:19948335-19948354 Msa0539230:intron 45.0%
TGGAGCTCCCTTATAAACAG+GGG - chr4_1:19948336-19948355 Msa0539230:intron 45.0%
TAGAAAACATGAGGCTTCCC+CGG + chr4_1:19948365-19948384 None:intergenic 45.0%
GATCGCTATCTGTGAGTTTG+TGG + chr4_1:19948463-19948482 None:intergenic 45.0%
AACTCACAGATAGCGATCCT+TGG - chr4_1:19948465-19948484 Msa0539230:intron 45.0%
GGGGCAAAATTGATCGTCAT+TGG + chr4_1:19948797-19948816 None:intergenic 45.0%
! TGACGATCAATTTTGCCCCT+TGG - chr4_1:19948798-19948817 Msa0539230:intron 45.0%
!! TATTAGGTCAAGGAGTACCG+TGG - chr4_1:19948984-19949003 Msa0539230:intron 45.0%
! GTACCGTGGCCTTTTACTTT+TGG - chr4_1:19948998-19949017 Msa0539230:intron 45.0%
CCACCAAAAGTAAAAGGCCA+CGG + chr4_1:19949004-19949023 None:intergenic 45.0%
!! CGTGGCCTTTTACTTTTGGT+GGG - chr4_1:19949002-19949021 Msa0539230:intron 45.0%
TTCAGTGGCAAAATCTACGG+CGG + chr4_1:19949091-19949110 None:intergenic 45.0%
! CTGGACCGATTTCTTTGAAG+GGG + chr4_1:19949160-19949179 None:intergenic 45.0%
! GCTGGACCGATTTCTTTGAA+GGG + chr4_1:19949161-19949180 None:intergenic 45.0%
! AGCTGGACCGATTTCTTTGA+AGG + chr4_1:19949162-19949181 None:intergenic 45.0%
! AGTATAAACAGTAGCGGAGC+TGG + chr4_1:19949179-19949198 None:intergenic 45.0%
GCTATAAATGTGGAGCTGAG+TGG - chr4_1:19949514-19949533 Msa0539230:CDS 45.0%
ATAAATGTGGAGCTGAGTGG+AGG - chr4_1:19949517-19949536 Msa0539230:CDS 45.0%
TAAATGTGGAGCTGAGTGGA+GGG - chr4_1:19949518-19949537 Msa0539230:CDS 45.0%
! TTCTTGTCCACTTTGGGAAG+AGG - chr4_1:19949557-19949576 Msa0539230:CDS 45.0%
!! CAACTTGACTAGCTTGACCT+AGG - chr4_1:19949682-19949701 Msa0539230:CDS 45.0%
!! TGACTAGCTTGACCTAGGTT+TGG - chr4_1:19949687-19949706 Msa0539230:CDS 45.0%
!!! TTTTATTTTTATTTTTACAA+TGG - chr4_1:19949726-19949745 Msa0539230:CDS 5.0%
GGATGGGTCTTCGAGAAAGA+CGG + chr4_1:19945224-19945243 None:intergenic 50.0%
AAACGGAGTCGGAGATGGAT+GGG + chr4_1:19945240-19945259 None:intergenic 50.0%
AAAACGGAGTCGGAGATGGA+TGG + chr4_1:19945241-19945260 None:intergenic 50.0%
GTTGAAAACGGAGTCGGAGA+TGG + chr4_1:19945245-19945264 None:intergenic 50.0%
TGGCAATCGAGATGAACGAC+AGG - chr4_1:19945299-19945318 Msa0539230:CDS 50.0%
GGCAATCGAGATGAACGACA+GGG - chr4_1:19945300-19945319 Msa0539230:CDS 50.0%
AGAAGGACGATCTCAACCGT+CGG - chr4_1:19945350-19945369 Msa0539230:intron 50.0%
! GGAGATTTTCAACATGCCGG+AGG - chr4_1:19945396-19945415 Msa0539230:intron 50.0%
! GATTTTCAACATGCCGGAGG+AGG - chr4_1:19945399-19945418 Msa0539230:intron 50.0%
CATTCATCCCAATCCTCCTC+CGG + chr4_1:19945415-19945434 None:intergenic 50.0%
GGAGGAGGATTGGGATGAAT+GGG - chr4_1:19945414-19945433 Msa0539230:intron 50.0%
GAGGAGGATTGGGATGAATG+GGG - chr4_1:19945415-19945434 Msa0539230:intron 50.0%
AGGAGGATTGGGATGAATGG+GGG - chr4_1:19945416-19945435 Msa0539230:intron 50.0%
GACGAACTCCCTTCACCAAA+TGG + chr4_1:19945457-19945476 None:intergenic 50.0%
TTTGGTGAAGGGAGTTCGTC+GGG - chr4_1:19945457-19945476 Msa0539230:intron 50.0%
! ACGATGATGGTCCGGTTGTT+AGG - chr4_1:19945494-19945513 Msa0539230:intron 50.0%
! CGATGATGGTCCGGTTGTTA+GGG - chr4_1:19945495-19945514 Msa0539230:intron 50.0%
!! GGTGAGAGTGTTTCTTTGGC+TGG - chr4_1:19945556-19945575 Msa0539230:intron 50.0%
CTGGGTGGTTGAAATGGAAG+AGG - chr4_1:19946077-19946096 Msa0539230:intron 50.0%
TAGAGATGAGGATGTTGCGC+TGG - chr4_1:19946239-19946258 Msa0539230:intron 50.0%
TTACTGCAGTCCAAGGCTTG+TGG - chr4_1:19947450-19947469 Msa0539230:CDS 50.0%
ATGAGGCCTGCTGAATCTAG+CGG - chr4_1:19947532-19947551 Msa0539230:intron 50.0%
!! CAGTTGATGGCTGTCAACAC+AGG - chr4_1:19947620-19947639 Msa0539230:intron 50.0%
GTCTTGCATGAGGCAACATG+TGG - chr4_1:19947651-19947670 Msa0539230:intron 50.0%
TTGCATGAGGCAACATGTGG+AGG - chr4_1:19947654-19947673 Msa0539230:intron 50.0%
GGTGAAGTTGCTCCATGGAA+TGG - chr4_1:19947675-19947694 Msa0539230:intron 50.0%
! GACATCAGTGCAGAGCATCT+TGG + chr4_1:19947847-19947866 None:intergenic 50.0%
CTCTGGCATCAAGGAGTCTT+TGG - chr4_1:19948052-19948071 Msa0539230:intron 50.0%
TGGCATCAAGGAGTCTTTGG+AGG - chr4_1:19948055-19948074 Msa0539230:intron 50.0%
GTTGCTACCACATGACATGC+AGG - chr4_1:19948118-19948137 Msa0539230:intron 50.0%
GGAGCTCCCTTATAAACAGG+GGG - chr4_1:19948337-19948356 Msa0539230:intron 50.0%
TGCAAGTCAGGTCATGCGAT+TGG - chr4_1:19948501-19948520 Msa0539230:intron 50.0%
CCATTGAATACTGGGCACGA+TGG + chr4_1:19948630-19948649 None:intergenic 50.0%
CCATCGTGCCCAGTATTCAA+TGG - chr4_1:19948627-19948646 Msa0539230:intron 50.0%
!! CCGTGGCCTTTTACTTTTGG+TGG - chr4_1:19949001-19949020 Msa0539230:intron 50.0%
TTCTGGCCCACCTATTGAAG+TGG - chr4_1:19949064-19949083 Msa0539230:intron 50.0%
GGACTACCGTTCTGATGAAG+AGG - chr4_1:19949617-19949636 Msa0539230:CDS 50.0%
! GGTCAAGCTAGTCAAGTTGC+CGG + chr4_1:19949681-19949700 None:intergenic 50.0%
! AGGTTGGTCGATGAGGGAAG+CGG + chr4_1:19945182-19945201 None:intergenic 55.0%
! GGAGGAAGGTTGGTCGATGA+GGG + chr4_1:19945188-19945207 None:intergenic 55.0%
! AGGAGGAAGGTTGGTCGATG+AGG + chr4_1:19945189-19945208 None:intergenic 55.0%
TGGGTCTTCGAGAAAGACGG+CGG + chr4_1:19945221-19945240 None:intergenic 55.0%
TCAACATGCCGGAGGAGGAT+TGG - chr4_1:19945404-19945423 Msa0539230:intron 55.0%
CAACATGCCGGAGGAGGATT+GGG - chr4_1:19945405-19945424 Msa0539230:intron 55.0%
CGGAGGAGGATTGGGATGAA+TGG - chr4_1:19945413-19945432 Msa0539230:intron 55.0%
GGAGGATTGGGATGAATGGG+GGG - chr4_1:19945417-19945436 Msa0539230:intron 55.0%
GAGGATTGGGATGAATGGGG+GGG - chr4_1:19945418-19945437 Msa0539230:intron 55.0%
GTGAGTGAGGAGGTTGTGAG+AGG - chr4_1:19945535-19945554 Msa0539230:intron 55.0%
CGCTGGATGAGTAGTGAGAC+TGG - chr4_1:19946256-19946275 Msa0539230:intron 55.0%
ATGGGCTTCGAAACAGCCGA+AGG - chr4_1:19947381-19947400 Msa0539230:CDS 55.0%
GCTAGATTCAGCAGGCCTCA+TGG + chr4_1:19947533-19947552 None:intergenic 55.0%
GTGGAGGTGAAGTTGCTCCA+TGG - chr4_1:19947670-19947689 Msa0539230:intron 55.0%
GGCATGTTGGCACCATTCCA+TGG + chr4_1:19947690-19947709 None:intergenic 55.0%
GTGCCAACATGCCCTCATGA+GGG - chr4_1:19947697-19947716 Msa0539230:intron 55.0%
! CATCCCTCATGAGGGCATGT+TGG + chr4_1:19947703-19947722 None:intergenic 55.0%
TGCAAGGTTCCGTGGCATAG+TGG - chr4_1:19947964-19947983 Msa0539230:intron 55.0%
CCGGCTCCCCCTGTTTATAA+GGG + chr4_1:19948346-19948365 None:intergenic 55.0%
CCCTTATAAACAGGGGGAGC+CGG - chr4_1:19948343-19948362 Msa0539230:intron 55.0%
CCTTATAAACAGGGGGAGCC+GGG - chr4_1:19948344-19948363 Msa0539230:intron 55.0%
CTTATAAACAGGGGGAGCCG+GGG - chr4_1:19948345-19948364 Msa0539230:intron 55.0%
GGCGGACCACTTCAATAGGT+GGG + chr4_1:19949073-19949092 None:intergenic 55.0%
CTACGGCGGACCACTTCAAT+AGG + chr4_1:19949077-19949096 None:intergenic 55.0%
ATTCCGCCACCGTGAGTTCG+TGG + chr4_1:19945105-19945124 None:intergenic 60.0%
!! ACTCACGGTGGCGGAATCCA+TGG - chr4_1:19945108-19945127 Msa0539230:three_prime_UTR 60.0%
GTCGATGAGGGAAGCGGAGA+GGG + chr4_1:19945176-19945195 None:intergenic 60.0%
TGGAGGAGGAGGAGGAAGGT+TGG + chr4_1:19945198-19945217 None:intergenic 60.0%
TTCGAGAAAGACGGCGGTGG+AGG + chr4_1:19945215-19945234 None:intergenic 60.0%
GTCTTCGAGAAAGACGGCGG+TGG + chr4_1:19945218-19945237 None:intergenic 60.0%
TCGACGAGGCGGAACGATGA+TGG - chr4_1:19945481-19945500 Msa0539230:intron 60.0%
! GAGGCGGAACGATGATGGTC+CGG - chr4_1:19945486-19945505 Msa0539230:intron 60.0%
TCATGCCTCGCCACAAGCCT+TGG + chr4_1:19947463-19947482 None:intergenic 60.0%
GGTGCCAACATGCCCTCATG+AGG - chr4_1:19947696-19947715 Msa0539230:intron 60.0%
GTTTCGGCTGCAAGGTTCCG+TGG - chr4_1:19947956-19947975 Msa0539230:intron 60.0%
CCCGGCTCCCCCTGTTTATA+AGG + chr4_1:19948347-19948366 None:intergenic 60.0%
CGGCGGACCACTTCAATAGG+TGG + chr4_1:19949074-19949093 None:intergenic 60.0%
GGCGCAACGCCACGAACTCA+CGG - chr4_1:19945093-19945112 Msa0539230:three_prime_UTR 65.0%
GCAACGCCACGAACTCACGG+TGG - chr4_1:19945096-19945115 Msa0539230:three_prime_UTR 65.0%
ACGCCACGAACTCACGGTGG+CGG - chr4_1:19945099-19945118 Msa0539230:three_prime_UTR 65.0%
GGGAAGCGGAGAGGGCTTCT+TGG + chr4_1:19945168-19945187 None:intergenic 65.0%
GGTCGATGAGGGAAGCGGAG+AGG + chr4_1:19945177-19945196 None:intergenic 65.0%
AAAGACGGCGGTGGAGGAGG+AGG + chr4_1:19945209-19945228 None:intergenic 65.0%
GAGAAAGACGGCGGTGGAGG+AGG + chr4_1:19945212-19945231 None:intergenic 65.0%
GGAGTTCGTCGGGTTCGACG+AGG - chr4_1:19945467-19945486 Msa0539230:intron 65.0%
GTTCGTCGGGTTCGACGAGG+CGG - chr4_1:19945470-19945489 Msa0539230:intron 65.0%
!! AGGAGGGGGCACTCGAAGCA+CGG + chr4_1:19945928-19945947 None:intergenic 65.0%
GCAGTCCAAGGCTTGTGGCG+AGG - chr4_1:19947455-19947474 Msa0539230:CDS 65.0%
GCGGTGGAGGAGGAGGAGGA+AGG + chr4_1:19945202-19945221 None:intergenic 70.0%
GACGGCGGTGGAGGAGGAGG+AGG + chr4_1:19945206-19945225 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 19945038 19949817 19945038 ID=Msa0539230;Name=Msa0539230
chr4_1 mRNA 19945038 19949817 19945038 ID=Msa0539230-mRNA-1;Parent=Msa0539230;Name=Msa0539230-mRNA-1;_AED=0.02;_eAED=0.02;_QI=11|1|1|1|1|1|3|149|552
chr4_1 exon 19945038 19945358 19945038 ID=Msa0539230-mRNA-1:exon:5733;Parent=Msa0539230-mRNA-1
chr4_1 exon 19946716 19947485 19946716 ID=Msa0539230-mRNA-1:exon:5732;Parent=Msa0539230-mRNA-1
chr4_1 exon 19949090 19949817 19949090 ID=Msa0539230-mRNA-1:exon:5731;Parent=Msa0539230-mRNA-1
chr4_1 five_prime_UTR 19949807 19949817 19949807 ID=Msa0539230-mRNA-1:five_prime_utr;Parent=Msa0539230-mRNA-1
chr4_1 CDS 19949090 19949806 19949090 ID=Msa0539230-mRNA-1:cds;Parent=Msa0539230-mRNA-1
chr4_1 CDS 19946716 19947485 19946716 ID=Msa0539230-mRNA-1:cds;Parent=Msa0539230-mRNA-1
chr4_1 CDS 19945187 19945358 19945187 ID=Msa0539230-mRNA-1:cds;Parent=Msa0539230-mRNA-1
chr4_1 three_prime_UTR 19945038 19945186 19945038 ID=Msa0539230-mRNA-1:three_prime_utr;Parent=Msa0539230-mRNA-1
Gene Sequence

>Msa0539230

ATGGACTCAACCCAAGAACAACAAGACTTTGACTTCTTGTTAACGGCGCAACGCCACGAACTCACGGTGGCGGAATCCATGGAATCCGATCTCGATTTCGCTTACAATCTTCAGCTCCAAGAAGCCCTCTCCGCTTCCCTCATCGACCAACCTTCCTCCTCCTCCTCCACCGCCGTCTTTCTCGAAGACCCATCCATCTCCGACTCCGTTTTCAACGCTAACTCTCTCCAGCTCCAAGAACTCGAAAGAATGGCAATCGAGATGAACGACAGGGTACAAAGCGAAAAAACAATGCGTGAAGAGAAGGACGATCTCAACCGTCGGATTCACGATCAGAAAATGGCGTCGGAGATTTTCAACATGCCGGAGGAGGATTGGGATGAATGGGGGGGTAATTTTGAGAAACCATTTGGTGAAGGGAGTTCGTCGGGTTCGACGAGGCGGAACGATGATGGTCCGGTTGTTAGGGTTTATTTTAAGGGTTTAGTGAGTGAGGAGGTTGTGAGAGGTGAGAGTGTTTCTTTGGCTGGGATTGGTGTTGCTGTTTGTGATGATGAGGATAATTTGATATTGGAAATTTCTAAGGCTGTTGCTGGGAATGAAAGTAGGAAAATTGCTGTGGAGCTTATGGCTTTGATTGAAGGTTTCAATGCTGTTATTGCTTTGGATTTGAAGCGTGTTATTTATTTTGGTGATTATTATACACTTTTTCAACATTTAAGTGGAAAATGGGCTTCGAAACAGCCGAAGGTCGCTACACTACTTAATAAGGTGAATATGCTTCAAAGAAAATTTGCTTACTGCAGTCCAAGGCTTGTGGCGAGGCATGATCTGAAATTTGCATTTAAGCTTGCAAGAGATGCAATTGTTTCTCAATCCATGAGGCCTGCTGAATCTAGCGGTGTAAAGAGTCTGAATGAAACTTGTGTCATTTGTTTGGAGGATAGTGATGTTAGTCAATTTTTTTCAGTTGATGGCTGTCAACACAGGTATTGCTTGTCTTGCATGAGGCAACATGTGGAGGTGAAGTTGCTCCATGGAATGGTGCCAACATGCCCTCATGAGGGATGCAAGAATGAACTTCTAGTTGACAGTTGCCGGAAATTCTTGACTTCAAAATTAGTTGAAACCATGCAGCAACGAAATTTTGAGGCATCAATTCCAGTTACTGAGAAAATTTACTGTCCTTATCCAAGATGCTCTGCACTGATGTCAAAAACTGAAGTTTTAGACTACTCCAAAAGTCTTATGGGTTCTGTACAATCAATGCCCAAGAAATGTGTAAAATGTCATGGTCTTTTCTGTTTCGGCTGCAAGGTTCCGTGGCATAGTGGTATGACATGTTATACCTACAAAAGGTTGAATCCTAACCCTCCATCAGAAGATTTTAAGTTGAAGTCTCTGGCATCAAGGAGTCTTTGGAGGCAGTGCGTGAAGTGTAACCATATGATTGAACTTGCTGAAGGTTGCTACCACATGACATGCAGATGCGGGTTCGAATTTTGCTATAAATGTGGAGCTGAGTGGAGGGATAAAAAAGCAACATGTTCTTGTCCACTTTGGGAAGAGGACAATATTTGGTTACAAGATCGTGATGATGATGAAGAGGACTACCGTTCTGATGAAGAGGACTACAGATCTGATGAAGATTATTATTAG
Protein sequence

>Msa0539230

MDSTQEQQDFDFLLTAQRHELTVAESMESDLDFAYNLQLQEALSASLIDQPSSSSSTAVFLEDPSISDSVFNANSLQLQELERMAIEMNDRVQSEKTMREEKDDLNRRIHDQKMASEIFNMPEEDWDEWGGNFEKPFGEGSSSGSTRRNDDGPVVRVYFKGLVSEEVVRGESVSLAGIGVAVCDDEDNLILEISKAVAGNESRKIAVELMALIEGFNAVIALDLKRVIYFGDYYTLFQHLSGKWASKQPKVATLLNKVNMLQRKFAYCSPRLVARHDLKFAFKLARDAIVSQSMRPAESSGVKSLNETCVICLEDSDVSQFFSVDGCQHRYCLSCMRQHVEVKLLHGMVPTCPHEGCKNELLVDSCRKFLTSKLVETMQQRNFEASIPVTEKIYCPYPRCSALMSKTEVLDYSKSLMGSVQSMPKKCVKCHGLFCFGCKVPWHSGMTCYTYKRLNPNPPSEDFKLKSLASRSLWRQCVKCNHMIELAEGCYHMTCRCGFEFCYKCGAEWRDKKATCSCPLWEEDNIWLQDRDDDEEDYRSDEEDYRSDEDYY*