Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602340 | XP_024636087.1 | 95.085 | 529 | 24 | 1 | 1 | 529 | 1 | 527 | 0.0 | 1051 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602340 | sp|F4ITM1|RGSL1_ARATH | 38.122 | 362 | 203 | 5 | 153 | 511 | 12 | 355 | 2.94e-77 | 252 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602340 | A0A396I5F0 | 95.085 | 529 | 24 | 1 | 1 | 529 | 1 | 527 | 0.0 | 1051 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0602340 | 0.819159 | 1.344472e-52 | -8.615850e-47 |
| Msa0003720 | Msa0602340 | 0.803555 | 3.296930e-49 | -8.615850e-47 |
| Msa0011960 | Msa0602340 | 0.801929 | 7.141671e-49 | -8.615850e-47 |
| Msa0032580 | Msa0602340 | 0.820244 | 7.597228e-53 | -8.615850e-47 |
| Msa0043980 | Msa0602340 | 0.803994 | 2.672177e-49 | -8.615850e-47 |
| Msa0044000 | Msa0602340 | 0.809623 | 1.727170e-50 | -8.615850e-47 |
| Msa0054440 | Msa0602340 | 0.813051 | 3.112302e-51 | -8.615850e-47 |
| Msa0054480 | Msa0602340 | 0.814855 | 1.245748e-51 | -8.615850e-47 |
| Msa0058300 | Msa0602340 | 0.801150 | 1.031269e-48 | -8.615850e-47 |
| Msa0059040 | Msa0602340 | 0.802049 | 6.745683e-49 | -8.615850e-47 |
| Msa0059110 | Msa0602340 | 0.809906 | 1.500950e-50 | -8.615850e-47 |
| Msa0065950 | Msa0602340 | 0.802839 | 4.637194e-49 | -8.615850e-47 |
| Msa0075500 | Msa0602340 | 0.819131 | 1.364585e-52 | -8.615850e-47 |
| Msa0079070 | Msa0602340 | 0.819372 | 1.202423e-52 | -8.615850e-47 |
| Msa0084080 | Msa0602340 | 0.803136 | 4.026503e-49 | -8.615850e-47 |
| Msa0090360 | Msa0602340 | 0.809559 | 1.782335e-50 | -8.615850e-47 |
| Msa0090570 | Msa0602340 | 0.825216 | 5.289347e-54 | -8.615850e-47 |
| Msa0105620 | Msa0602340 | 0.803489 | 3.401518e-49 | -8.615850e-47 |
| Msa0127020 | Msa0602340 | 0.828319 | 9.604301e-55 | -8.615850e-47 |
| Msa0127800 | Msa0602340 | 0.820827 | 5.582799e-53 | -8.615850e-47 |
| Msa0137840 | Msa0602340 | 0.813416 | 2.588279e-51 | -8.615850e-47 |
| Msa0138020 | Msa0602340 | 0.823980 | 1.033874e-53 | -8.615850e-47 |
| Msa0150820 | Msa0602340 | 0.803182 | 3.938866e-49 | -8.615850e-47 |
| Msa0159340 | Msa0602340 | 0.811437 | 7.003084e-51 | -8.615850e-47 |
| Msa0160550 | Msa0602340 | 0.803045 | 4.203529e-49 | -8.615850e-47 |
| Msa0169280 | Msa0602340 | 0.828598 | 8.224313e-55 | -8.615850e-47 |
| Msa0171540 | Msa0602340 | 0.802496 | 5.458742e-49 | -8.615850e-47 |
| Msa0172970 | Msa0602340 | 0.821783 | 3.359584e-53 | -8.615850e-47 |
| Msa0183850 | Msa0602340 | 0.816981 | 4.178756e-52 | -8.615850e-47 |
| Msa0184040 | Msa0602340 | 0.811886 | 5.594344e-51 | -8.615850e-47 |
| Msa0187120 | Msa0602340 | 0.820826 | 5.584989e-53 | -8.615850e-47 |
| Msa0197660 | Msa0602340 | 0.811661 | 6.263050e-51 | -8.615850e-47 |
| Msa0211150 | Msa0602340 | 0.802195 | 6.296435e-49 | -8.615850e-47 |
| Msa0212930 | Msa0602340 | 0.800844 | 1.191030e-48 | -8.615850e-47 |
| Msa0229380 | Msa0602340 | 0.820913 | 5.333573e-53 | -8.615850e-47 |
| Msa0233370 | Msa0602340 | 0.808597 | 2.864151e-50 | -8.615850e-47 |
| Msa0367870 | Msa0602340 | 0.802869 | 4.570510e-49 | -8.615850e-47 |
| Msa0372340 | Msa0602340 | 0.827892 | 1.217323e-54 | -8.615850e-47 |
| Msa0380300 | Msa0602340 | 0.806026 | 1.004338e-49 | -8.615850e-47 |
| Msa0382370 | Msa0602340 | 0.808827 | 2.557763e-50 | -8.615850e-47 |
| Msa0383800 | Msa0602340 | 0.826984 | 2.009568e-54 | -8.615850e-47 |
| Msa0420560 | Msa0602340 | 0.813907 | 2.017881e-51 | -8.615850e-47 |
| Msa0428080 | Msa0602340 | 0.804865 | 1.759612e-49 | -8.615850e-47 |
| Msa0432160 | Msa0602340 | 0.808142 | 3.580919e-50 | -8.615850e-47 |
| Msa0434180 | Msa0602340 | 0.809947 | 1.471072e-50 | -8.615850e-47 |
| Msa0455760 | Msa0602340 | 0.809830 | 1.558715e-50 | -8.615850e-47 |
| Msa0476680 | Msa0602340 | 0.816524 | 5.290183e-52 | -8.615850e-47 |
| Msa0481530 | Msa0602340 | 0.812419 | 4.279308e-51 | -8.615850e-47 |
| Msa0239800 | Msa0602340 | 0.808560 | 2.916822e-50 | -8.615850e-47 |
| Msa0253200 | Msa0602340 | 0.814386 | 1.581917e-51 | -8.615850e-47 |
| Msa0260680 | Msa0602340 | 0.800930 | 1.143659e-48 | -8.615850e-47 |
| Msa0262340 | Msa0602340 | 0.810634 | 1.045787e-50 | -8.615850e-47 |
| Msa0278580 | Msa0602340 | 0.815614 | 8.445642e-52 | -8.615850e-47 |
| Msa0281530 | Msa0602340 | 0.805732 | 1.158362e-49 | -8.615850e-47 |
| Msa0287410 | Msa0602340 | 0.802840 | 4.633860e-49 | -8.615850e-47 |
| Msa0292030 | Msa0602340 | 0.816801 | 4.586544e-52 | -8.615850e-47 |
| Msa0295540 | Msa0602340 | 0.801674 | 8.053790e-49 | -8.615850e-47 |
| Msa0309770 | Msa0602340 | 0.817346 | 3.458611e-52 | -8.615850e-47 |
| Msa0317510 | Msa0602340 | 0.807894 | 4.043582e-50 | -8.615850e-47 |
| Msa0317970 | Msa0602340 | 0.826837 | 2.178726e-54 | -8.615850e-47 |
| Msa0330310 | Msa0602340 | 0.806771 | 6.996889e-50 | -8.615850e-47 |
| Msa0337620 | Msa0602340 | 0.812617 | 3.875020e-51 | -8.615850e-47 |
| Msa0340380 | Msa0602340 | 0.807982 | 3.873797e-50 | -8.615850e-47 |
| Msa0351990 | Msa0602340 | 0.806493 | 8.007231e-50 | -8.615850e-47 |
| Msa0363790 | Msa0602340 | 0.835353 | 1.763125e-56 | -8.615850e-47 |
| Msa0485240 | Msa0602340 | 0.808470 | 3.048076e-50 | -8.615850e-47 |
| Msa0493410 | Msa0602340 | 0.809903 | 1.502982e-50 | -8.615850e-47 |
| Msa0512750 | Msa0602340 | 0.808939 | 2.420784e-50 | -8.615850e-47 |
| Msa0521010 | Msa0602340 | 0.812331 | 4.474787e-51 | -8.615850e-47 |
| Msa0522070 | Msa0602340 | 0.816335 | 5.830582e-52 | -8.615850e-47 |
| Msa0529890 | Msa0602340 | 0.821088 | 4.861164e-53 | -8.615850e-47 |
| Msa0539230 | Msa0602340 | 0.835034 | 2.122376e-56 | -8.615850e-47 |
| Msa0542090 | Msa0602340 | 0.804798 | 1.817048e-49 | -8.615850e-47 |
| Msa0542130 | Msa0602340 | 0.802566 | 5.278890e-49 | -8.615850e-47 |
| Msa0542290 | Msa0602340 | 0.807739 | 4.362826e-50 | -8.615850e-47 |
| Msa0547160 | Msa0602340 | 0.813788 | 2.143381e-51 | -8.615850e-47 |
| Msa0556060 | Msa0602340 | 0.815341 | 9.715389e-52 | -8.615850e-47 |
| Msa0572840 | Msa0602340 | 0.807479 | 4.955066e-50 | -8.615850e-47 |
| Msa0581110 | Msa0602340 | 0.806624 | 7.514540e-50 | -8.615850e-47 |
| Msa0581280 | Msa0602340 | 0.806740 | 7.103197e-50 | -8.615850e-47 |
| Msa0585560 | Msa0602340 | 0.820016 | 8.568262e-53 | -8.615850e-47 |
| Msa0602340 | Msa0602690 | 0.801282 | 9.690305e-49 | -8.615850e-47 |
| Msa0602340 | Msa0610430 | 0.817274 | 3.590542e-52 | -8.615850e-47 |
| Msa0602340 | Msa0615490 | 0.817505 | 3.184283e-52 | -8.615850e-47 |
| Msa0602340 | Msa0615710 | 0.807647 | 4.564893e-50 | -8.615850e-47 |
| Msa0602340 | Msa0616240 | 0.814642 | 1.388234e-51 | -8.615850e-47 |
| Msa0602340 | Msa0625720 | 0.822826 | 1.923974e-53 | -8.615850e-47 |
| Msa0602340 | Msa0642970 | 0.806218 | 9.150393e-50 | -8.615850e-47 |
| Msa0602340 | Msa0643350 | 0.817495 | 3.201985e-52 | -8.615850e-47 |
| Msa0602340 | Msa0643560 | 0.813950 | 1.974637e-51 | -8.615850e-47 |
| Msa0602340 | Msa0661650 | 0.801679 | 8.037381e-49 | -8.615850e-47 |
| Msa0602340 | Msa0663390 | 0.808921 | 2.441453e-50 | -8.615850e-47 |
| Msa0602340 | Msa0673460 | 0.807478 | 4.957613e-50 | -8.615850e-47 |
| Msa0602340 | Msa0682680 | 0.806683 | 7.303537e-50 | -8.615850e-47 |
| Msa0602340 | Msa0683170 | 0.911896 | 3.616835e-83 | -8.615850e-47 |
| Msa0602340 | Msa0692830 | 0.834384 | 3.092229e-56 | -8.615850e-47 |
| Msa0602340 | Msa0692950 | 0.830430 | 2.949350e-55 | -8.615850e-47 |
| Msa0602340 | Msa0698540 | 0.834706 | 2.566623e-56 | -8.615850e-47 |
| Msa0602340 | Msa0699570 | 0.808314 | 3.292172e-50 | -8.615850e-47 |
| Msa0602340 | Msa0707250 | 0.819915 | 9.037192e-53 | -8.615850e-47 |
| Msa0602340 | Msa0711780 | 0.817813 | 2.713587e-52 | -8.615850e-47 |
| Msa0602340 | Msa0725050 | 0.800836 | 1.195270e-48 | -8.615850e-47 |
| Msa0602340 | Msa0737600 | 0.800781 | 1.226824e-48 | -8.615850e-47 |
| Msa0602340 | Msa0762970 | 0.811797 | 5.848045e-51 | -8.615850e-47 |
| Msa0602340 | Msa0793800 | 0.802560 | 5.294832e-49 | -8.615850e-47 |
| Msa0602340 | Msa0794670 | 0.818291 | 2.116479e-52 | -8.615850e-47 |
| Msa0602340 | Msa0816560 | 0.804936 | 1.700157e-49 | -8.615850e-47 |
| Msa0602340 | Msa0821190 | 0.802882 | 4.542856e-49 | -8.615850e-47 |
| Msa0602340 | Msa0822500 | 0.805152 | 1.532307e-49 | -8.615850e-47 |
| Msa0602340 | Msa0826150 | 0.804791 | 1.823113e-49 | -8.615850e-47 |
| Msa0602340 | Msa0831110 | 0.802703 | 4.947035e-49 | -8.615850e-47 |
| Msa0602340 | Msa0831530 | 0.813016 | 3.168169e-51 | -8.615850e-47 |
| Msa0602340 | Msa0832340 | 0.802172 | 6.365088e-49 | -8.615850e-47 |
| Msa0602340 | Msa0849030 | 0.804524 | 2.072523e-49 | -8.615850e-47 |
| Msa0602340 | Msa0856910 | 0.809174 | 2.155557e-50 | -8.615850e-47 |
| Msa0602340 | Msa0880810 | 0.809726 | 1.641235e-50 | -8.615850e-47 |
| Msa0602340 | Msa0923330 | 0.803522 | 3.349064e-49 | -8.615850e-47 |
| Msa0602340 | Msa0947660 | 0.804710 | 1.895738e-49 | -8.615850e-47 |
| Msa0602340 | Msa0973600 | 0.806354 | 8.567888e-50 | -8.615850e-47 |
| Msa0602340 | Msa1019000 | 0.803833 | 2.886532e-49 | -8.615850e-47 |
| Msa0602340 | Msa1037420 | 0.808380 | 3.185985e-50 | -8.615850e-47 |
| Msa0602340 | Msa1043050 | 0.802798 | 4.728360e-49 | -8.615850e-47 |
| Msa0602340 | Msa1046020 | 0.807701 | 4.445534e-50 | -8.615850e-47 |
| Msa0602340 | Msa1046060 | 0.803687 | 3.094484e-49 | -8.615850e-47 |
| Msa0602340 | Msa1046460 | 0.804161 | 2.466848e-49 | -8.615850e-47 |
| Msa0602340 | Msa1048160 | 0.829228 | 5.788027e-55 | -8.615850e-47 |
| Msa0602340 | Msa1048220 | 0.815400 | 9.428268e-52 | -8.615850e-47 |
| Msa0602340 | Msa1051200 | 0.803927 | 2.759318e-49 | -8.615850e-47 |
| Msa0602340 | Msa1080290 | 0.813687 | 2.255762e-51 | -8.615850e-47 |
| Msa0602340 | Msa1088640 | 0.809529 | 1.808707e-50 | -8.615850e-47 |
| Msa0602340 | Msa1089450 | 0.817167 | 3.795676e-52 | -8.615850e-47 |
| Msa0602340 | Msa1089460 | 0.808788 | 2.607388e-50 | -8.615850e-47 |
| Msa0602340 | Msa1091100 | 0.810185 | 1.306949e-50 | -8.615850e-47 |
| Msa0602340 | Msa1096070 | 0.810008 | 1.426912e-50 | -8.615850e-47 |
| Msa0602340 | Msa1100050 | 0.809160 | 2.171021e-50 | -8.615850e-47 |
| Msa0602340 | Msa1104560 | 0.805687 | 1.183323e-49 | -8.615850e-47 |
| Msa0602340 | Msa1126830 | 0.805282 | 1.439380e-49 | -8.615850e-47 |
| Msa0602340 | Msa1128600 | 0.805123 | 1.553853e-49 | -8.615850e-47 |
| Msa0602340 | Msa1129550 | 0.810783 | 9.708661e-51 | -8.615850e-47 |
| Msa0602340 | Msa1129730 | 0.812312 | 4.517503e-51 | -8.615850e-47 |
| Msa0602340 | Msa1134090 | 0.803323 | 3.681903e-49 | -8.615850e-47 |
| Msa0602340 | Msa1135470 | 0.809323 | 2.002413e-50 | -8.615850e-47 |
| Msa0602340 | Msa1137700 | 0.810987 | 8.767672e-51 | -8.615850e-47 |
| Msa0602340 | Msa1150710 | 0.812360 | 4.410063e-51 | -8.615850e-47 |
| Msa0602340 | Msa1156160 | 0.803673 | 3.115982e-49 | -8.615850e-47 |
| Msa0602340 | Msa1162780 | 0.805150 | 1.534169e-49 | -8.615850e-47 |
| Msa0602340 | Msa1163540 | 0.812809 | 3.517637e-51 | -8.615850e-47 |
| Msa0602340 | Msa1180500 | 0.822835 | 1.914897e-53 | -8.615850e-47 |
| Msa0602340 | Msa1204530 | 0.806661 | 7.379990e-50 | -8.615850e-47 |
| Msa0602340 | Msa1208880 | 0.816233 | 6.144814e-52 | -8.615850e-47 |
| Msa0602340 | Msa1209200 | 0.814469 | 1.516734e-51 | -8.615850e-47 |
| Msa0602340 | Msa1209760 | 0.807561 | 4.760276e-50 | -8.615850e-47 |
| Msa0602340 | Msa1210020 | 0.814555 | 1.451138e-51 | -8.615850e-47 |
| Msa0602340 | Msa1210110 | 0.811949 | 5.419164e-51 | -8.615850e-47 |
| Msa0602340 | Msa1211230 | -0.809497 | 1.838150e-50 | -8.615850e-47 |
| Msa0602340 | Msa1211420 | -0.808288 | 3.334176e-50 | -8.615850e-47 |
| Msa0602340 | Msa1217470 | 0.811078 | 8.381560e-51 | -8.615850e-47 |
| Msa0602340 | Msa1218580 | 0.808170 | 3.531897e-50 | -8.615850e-47 |
| Msa0602340 | Msa1224810 | 0.823117 | 1.646302e-53 | -8.615850e-47 |
| Msa0602340 | Msa1225700 | 0.813657 | 2.291329e-51 | -8.615850e-47 |
| Msa0602340 | Msa1231840 | 0.840901 | 6.575447e-58 | -8.615850e-47 |
| Msa0602340 | Msa1245930 | 0.808983 | 2.368302e-50 | -8.615850e-47 |
| Msa0602340 | Msa1259060 | 0.815508 | 8.919169e-52 | -8.615850e-47 |
| Msa0602340 | Msa1274560 | 0.810098 | 1.364563e-50 | -8.615850e-47 |
| Msa0602340 | Msa1277690 | 0.803781 | 2.959611e-49 | -8.615850e-47 |
| Msa0602340 | Msa1294820 | 0.818214 | 2.202445e-52 | -8.615850e-47 |
| Msa0602340 | Msa1298510 | 0.810982 | 8.793226e-51 | -8.615850e-47 |
| Msa0602340 | Msa1305810 | 0.818712 | 1.699069e-52 | -8.615850e-47 |
| Msa0602340 | Msa1306560 | 0.802675 | 5.012614e-49 | -8.615850e-47 |
| Msa0602340 | Msa1307180 | 0.813580 | 2.382309e-51 | -8.615850e-47 |
| Msa0602340 | Msa1312520 | 0.828031 | 1.127024e-54 | -8.615850e-47 |
| Msa0602340 | Msa1316360 | 0.812716 | 3.685515e-51 | -8.615850e-47 |
| Msa0602340 | Msa1323710 | 0.808551 | 2.930186e-50 | -8.615850e-47 |
| Msa0602340 | Msa1328710 | 0.804748 | 1.861619e-49 | -8.615850e-47 |
| Msa0602340 | Msa1331000 | 0.800658 | 1.300091e-48 | -8.615850e-47 |
| Msa0602340 | Msa1331050 | -0.803633 | 3.176583e-49 | -8.615850e-47 |
| Msa0602340 | Msa1342410 | 0.812068 | 5.106986e-51 | -8.615850e-47 |
| Msa0602340 | Msa1355890 | 0.804516 | 2.081205e-49 | -8.615850e-47 |
| Msa0602340 | Msa1369780 | 0.802547 | 5.326422e-49 | -8.615850e-47 |
| Msa0602340 | Msa1385770 | 0.804112 | 2.525612e-49 | -8.615850e-47 |
| Msa0602340 | Msa1389880 | 0.808582 | 2.885448e-50 | -8.615850e-47 |
| Msa0602340 | Msa1394290 | 0.809030 | 2.314388e-50 | -8.615850e-47 |
| Msa0602340 | Msa1400580 | 0.818226 | 2.188785e-52 | -8.615850e-47 |
| Msa0602340 | Msa1407190 | 0.807865 | 4.101975e-50 | -8.615850e-47 |
| Msa0602340 | Msa1409240 | 0.803325 | 3.678587e-49 | -8.615850e-47 |
| Msa0602340 | Msa1418240 | 0.806927 | 6.486583e-50 | -8.615850e-47 |
| Msa0602340 | Msa1424750 | 0.823004 | 1.749298e-53 | -8.615850e-47 |
| Msa0602340 | Msa1432130 | 0.809887 | 1.515545e-50 | -8.615850e-47 |
| Msa0602340 | Msa1433390 | 0.816527 | 5.281597e-52 | -8.615850e-47 |
| Msa0602340 | Msa1434140 | 0.803515 | 3.360401e-49 | -8.615850e-47 |
| Msa0602340 | Msa1436600 | 0.807026 | 6.178858e-50 | -8.615850e-47 |
| Msa0602340 | Msa1443850 | 0.802144 | 6.450517e-49 | -8.615850e-47 |
| Msa0602340 | Msa1446950 | 0.813993 | 1.931753e-51 | -8.615850e-47 |
| Msa0602340 | Msa1454480 | 0.816820 | 4.539767e-52 | -8.615850e-47 |
| Msa0602340 | Msa1454570 | 0.827671 | 1.375382e-54 | -8.615850e-47 |
| Msa0602340 | Msa1460320 | -0.802995 | 4.306330e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602340 | MtrunA17_Chr4g0029991 | 95.085 | 529 | 24 | 1 | 1 | 529 | 1 | 527 | 0.0 | 1051 |
| Msa0602340 | MtrunA17_Chr2g0291681 | 32.808 | 381 | 232 | 11 | 155 | 526 | 66 | 431 | 5.65e-57 | 199 |
| Msa0602340 | MtrunA17_Chr2g0301841 | 34.123 | 211 | 127 | 4 | 309 | 517 | 96 | 296 | 4.00e-35 | 134 |
| Msa0602340 | MtrunA17_Chr3g0103961 | 33.491 | 212 | 128 | 4 | 301 | 509 | 47 | 248 | 9.89e-35 | 131 |
| Msa0602340 | MtrunA17_Chr3g0103931 | 35.784 | 204 | 115 | 5 | 309 | 509 | 53 | 243 | 2.92e-34 | 130 |
| Msa0602340 | MtrunA17_Chr3g0103941 | 35.294 | 204 | 120 | 3 | 309 | 509 | 46 | 240 | 3.20e-34 | 130 |
| Msa0602340 | MtrunA17_Chr2g0301821 | 34.286 | 210 | 126 | 4 | 292 | 499 | 70 | 269 | 1.28e-32 | 126 |
| Msa0602340 | MtrunA17_Chr2g0301761 | 33.171 | 205 | 125 | 3 | 297 | 499 | 68 | 262 | 4.08e-29 | 116 |
| Msa0602340 | MtrunA17_Chr3g0103851 | 31.754 | 211 | 131 | 5 | 304 | 510 | 242 | 443 | 5.39e-28 | 117 |
| Msa0602340 | MtrunA17_Chr3g0103911 | 34.021 | 194 | 116 | 4 | 309 | 499 | 46 | 230 | 7.73e-28 | 111 |
| Msa0602340 | MtrunA17_Chr3g0104441 | 31.222 | 221 | 133 | 5 | 299 | 508 | 20 | 232 | 9.87e-28 | 112 |
| Msa0602340 | MtrunA17_Chr3g0103891 | 34.021 | 194 | 116 | 4 | 309 | 499 | 46 | 230 | 1.33e-27 | 111 |
| Msa0602340 | MtrunA17_Chr3g0104451 | 31.507 | 219 | 134 | 5 | 299 | 508 | 16 | 227 | 2.39e-27 | 110 |
| Msa0602340 | MtrunA17_Chr1g0206011 | 33.333 | 177 | 108 | 4 | 322 | 496 | 23 | 191 | 1.21e-26 | 107 |
| Msa0602340 | MtrunA17_Chr5g0434721 | 32.083 | 240 | 105 | 11 | 275 | 510 | 130 | 315 | 2.49e-26 | 109 |
| Msa0602340 | MtrunA17_Chr1g0206001 | 37.584 | 149 | 84 | 3 | 369 | 516 | 3 | 143 | 3.84e-26 | 103 |
| Msa0602340 | MtrunA17_Chr5g0425671 | 33.333 | 204 | 125 | 5 | 294 | 496 | 94 | 287 | 6.44e-26 | 108 |
| Msa0602340 | MtrunA17_Chr4g0031451 | 29.353 | 201 | 126 | 4 | 313 | 509 | 1 | 189 | 1.26e-25 | 104 |
| Msa0602340 | MtrunA17_Chr2g0301741 | 31.795 | 195 | 121 | 3 | 309 | 501 | 69 | 253 | 2.08e-25 | 106 |
| Msa0602340 | MtrunA17_Chr2g0301731 | 31.658 | 199 | 115 | 5 | 309 | 501 | 68 | 251 | 1.25e-23 | 100 |
| Msa0602340 | MtrunA17_Chr3g0103871 | 28.571 | 203 | 134 | 4 | 297 | 496 | 50 | 244 | 4.66e-23 | 98.6 |
| Msa0602340 | MtrunA17_Chr8g0344981 | 28.497 | 193 | 124 | 4 | 307 | 496 | 61 | 242 | 9.67e-22 | 95.9 |
| Msa0602340 | MtrunA17_Chr2g0301751 | 29.018 | 224 | 136 | 5 | 291 | 501 | 63 | 276 | 1.93e-20 | 91.7 |
| Msa0602340 | MtrunA17_Chr4g0031461 | 35.115 | 131 | 73 | 4 | 390 | 519 | 5 | 124 | 7.79e-20 | 85.5 |
| Msa0602340 | MtrunA17_Chr1g0164621 | 27.586 | 203 | 128 | 7 | 308 | 505 | 1244 | 1432 | 2.67e-19 | 92.4 |
| Msa0602340 | MtrunA17_Chr3g0082091 | 27.586 | 203 | 128 | 7 | 308 | 505 | 1242 | 1430 | 5.28e-19 | 91.3 |
| Msa0602340 | MtrunA17_Chr4g0031441 | 27.807 | 187 | 123 | 4 | 309 | 493 | 91 | 267 | 2.78e-18 | 85.9 |
| Msa0602340 | MtrunA17_Chr3g0103861 | 26.977 | 215 | 110 | 5 | 300 | 508 | 49 | 222 | 4.31e-17 | 81.3 |
| Msa0602340 | MtrunA17_Chr3g0123681 | 26.108 | 203 | 131 | 7 | 308 | 505 | 1522 | 1710 | 2.89e-16 | 82.8 |
| Msa0602340 | MtrunA17_Chr3g0103951 | 33.333 | 129 | 74 | 3 | 370 | 496 | 22 | 140 | 1.27e-13 | 68.6 |
| Msa0602340 | MtrunA17_Chr3g0100351 | 23.148 | 216 | 105 | 3 | 305 | 516 | 42 | 200 | 5.08e-13 | 68.2 |
| Msa0602340 | MtrunA17_Chr3g0100371 | 25.112 | 223 | 108 | 4 | 290 | 510 | 46 | 211 | 2.97e-12 | 66.6 |
| Msa0602340 | MtrunA17_Chr2g0329221 | 24.762 | 210 | 138 | 7 | 308 | 511 | 146 | 341 | 3.21e-11 | 65.9 |
| Msa0602340 | MtrunA17_Chr3g0110341 | 24.762 | 210 | 138 | 7 | 308 | 511 | 158 | 353 | 5.52e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602340 | AT5G60250.1 | 40.968 | 537 | 272 | 9 | 27 | 530 | 1 | 525 | 2.29e-139 | 418 |
| Msa0602340 | AT2G25370.1 | 45.407 | 381 | 192 | 6 | 136 | 512 | 135 | 503 | 9.61e-103 | 322 |
| Msa0602340 | AT3G45580.1 | 41.322 | 363 | 198 | 4 | 156 | 517 | 29 | 377 | 3.04e-98 | 304 |
| Msa0602340 | AT2G25370.2 | 44.357 | 381 | 169 | 7 | 136 | 512 | 105 | 446 | 3.81e-94 | 298 |
| Msa0602340 | AT2G25360.1 | 43.895 | 344 | 174 | 5 | 210 | 550 | 1 | 328 | 5.87e-89 | 279 |
| Msa0602340 | AT5G37560.1 | 38.810 | 420 | 218 | 7 | 140 | 546 | 21 | 414 | 1.31e-85 | 273 |
| Msa0602340 | AT2G21420.1 | 40.052 | 382 | 196 | 8 | 138 | 512 | 28 | 383 | 6.19e-84 | 269 |
| Msa0602340 | AT2G26130.1 | 38.122 | 362 | 203 | 5 | 153 | 511 | 12 | 355 | 2.99e-78 | 252 |
| Msa0602340 | AT3G43750.1 | 39.943 | 348 | 188 | 6 | 152 | 496 | 10 | 339 | 1.59e-77 | 248 |
| Msa0602340 | AT3G45470.1 | 50.463 | 216 | 98 | 2 | 306 | 519 | 3 | 211 | 1.69e-69 | 223 |
| Msa0602340 | AT3G45540.1 | 43.321 | 277 | 147 | 4 | 236 | 508 | 25 | 295 | 7.90e-69 | 226 |
| Msa0602340 | AT3G45540.2 | 43.911 | 271 | 142 | 4 | 242 | 508 | 2 | 266 | 1.41e-68 | 224 |
| Msa0602340 | AT3G45480.1 | 35.674 | 356 | 193 | 6 | 157 | 510 | 21 | 342 | 6.34e-68 | 224 |
| Msa0602340 | AT2G26135.1 | 36.544 | 353 | 187 | 6 | 157 | 508 | 29 | 345 | 1.43e-67 | 223 |
| Msa0602340 | AT3G45460.1 | 33.684 | 380 | 220 | 6 | 132 | 510 | 6 | 354 | 6.34e-67 | 222 |
| Msa0602340 | AT2G19610.2 | 35.475 | 358 | 219 | 8 | 156 | 507 | 51 | 402 | 1.87e-66 | 222 |
| Msa0602340 | AT3G45570.1 | 38.387 | 310 | 170 | 7 | 157 | 461 | 18 | 311 | 1.49e-64 | 213 |
| Msa0602340 | AT2G19610.1 | 34.393 | 346 | 216 | 7 | 156 | 496 | 51 | 390 | 3.18e-61 | 207 |
| Msa0602340 | AT5G07640.1 | 37.459 | 307 | 184 | 6 | 157 | 460 | 9 | 310 | 7.50e-58 | 196 |
| Msa0602340 | AT3G45555.1 | 48.958 | 192 | 87 | 4 | 307 | 495 | 15 | 198 | 7.79e-51 | 174 |
| Msa0602340 | AT4G19670.2 | 32.454 | 379 | 235 | 11 | 155 | 524 | 59 | 425 | 4.54e-49 | 178 |
| Msa0602340 | AT4G19670.3 | 32.454 | 379 | 235 | 11 | 155 | 524 | 59 | 425 | 4.54e-49 | 178 |
| Msa0602340 | AT4G19670.5 | 32.454 | 379 | 235 | 11 | 155 | 524 | 59 | 425 | 4.54e-49 | 178 |
| Msa0602340 | AT4G19670.7 | 32.454 | 379 | 235 | 11 | 155 | 524 | 59 | 425 | 4.54e-49 | 178 |
| Msa0602340 | AT4G19670.4 | 32.454 | 379 | 235 | 11 | 155 | 524 | 59 | 425 | 4.54e-49 | 178 |
| Msa0602340 | AT4G19670.1 | 32.454 | 379 | 235 | 11 | 155 | 524 | 59 | 425 | 4.54e-49 | 178 |
| Msa0602340 | AT4G19670.6 | 32.454 | 379 | 235 | 11 | 155 | 524 | 59 | 425 | 4.54e-49 | 178 |
| Msa0602340 | AT3G45510.1 | 38.725 | 204 | 115 | 3 | 250 | 452 | 10 | 204 | 2.44e-40 | 147 |
| Msa0602340 | AT3G45560.1 | 32.000 | 275 | 166 | 6 | 156 | 425 | 13 | 271 | 2.83e-36 | 142 |
| Msa0602340 | AT3G53690.1 | 32.432 | 222 | 139 | 3 | 297 | 516 | 103 | 315 | 9.16e-35 | 134 |
| Msa0602340 | AT3G14250.1 | 29.911 | 224 | 143 | 4 | 297 | 514 | 83 | 298 | 6.46e-31 | 122 |
| Msa0602340 | AT3G45490.1 | 38.150 | 173 | 87 | 6 | 128 | 293 | 2 | 161 | 1.14e-20 | 90.9 |
| Msa0602340 | AT4G01020.1 | 27.723 | 202 | 126 | 6 | 309 | 505 | 1561 | 1747 | 8.95e-18 | 88.2 |
| Msa0602340 | AT5G10370.1 | 27.228 | 202 | 127 | 6 | 309 | 505 | 1564 | 1750 | 1.63e-17 | 87.0 |
| Msa0602340 | AT1G05890.1 | 25.481 | 208 | 135 | 7 | 308 | 509 | 131 | 324 | 6.22e-13 | 71.6 |
| Msa0602340 | AT2G31770.1 | 27.477 | 222 | 140 | 7 | 303 | 517 | 122 | 329 | 6.22e-13 | 71.6 |
| Msa0602340 | AT1G05890.2 | 25.238 | 210 | 137 | 7 | 308 | 511 | 173 | 368 | 6.38e-13 | 72.0 |
| Msa0602340 | AT3G43180.1 | 38.835 | 103 | 54 | 3 | 272 | 373 | 30 | 124 | 1.10e-12 | 67.4 |
| Msa0602340 | AT2G31510.2 | 23.774 | 265 | 170 | 10 | 257 | 511 | 89 | 331 | 1.03e-11 | 67.8 |
| Msa0602340 | AT2G31510.1 | 23.774 | 265 | 170 | 10 | 257 | 511 | 89 | 331 | 1.10e-11 | 67.8 |
| Msa0602340 | AT3G27710.1 | 26.887 | 212 | 138 | 6 | 309 | 515 | 121 | 320 | 2.06e-11 | 67.0 |
| Msa0602340 | AT2G31510.3 | 23.774 | 265 | 170 | 10 | 257 | 511 | 17 | 259 | 3.37e-11 | 66.2 |
| Msa0602340 | AT2G31760.1 | 26.496 | 234 | 140 | 8 | 309 | 535 | 121 | 329 | 5.21e-11 | 65.5 |
| Msa0602340 | AT1G65430.1 | 24.820 | 278 | 165 | 12 | 250 | 509 | 69 | 320 | 5.39e-11 | 65.9 |
Find 142 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAGCGTGTTATTTATTT+TGG | 0.158679 | 4_2:-45896562 | Msa0602340:CDS |
| AACCATGCAGCAACGAAATT+TGG | 0.194789 | 4_2:-45894496 | Msa0602340:CDS |
| AGACTACTCCAAAAGTCTTA+TGG | 0.234580 | 4_2:-45894394 | Msa0602340:CDS |
| TACAGAGCCCATAAGACTTT+TGG | 0.264270 | 4_2:+45894386 | None:intergenic |
| CTCTGGCATCAAGGAGTCTT+TGG | 0.274888 | 4_2:-45894224 | Msa0602340:CDS |
| TTTGGGAAGAGGACAATATT+TGG | 0.281754 | 4_2:-45892740 | Msa0602340:CDS |
| GTTTGTTTATATGATTTAAT+AGG | 0.285822 | 4_2:-45892523 | Msa0602340:three_prime_UTR |
| TTGGTCAGTTAAGTGGAAAA+TGG | 0.293607 | 4_2:-45894914 | Msa0602340:intron |
| AACTTCTAGTTGACAGTTGC+CGG | 0.294527 | 4_2:-45894545 | Msa0602340:CDS |
| AGTCAAAGTCTTGTTGTTCT+TGG | 0.295431 | 4_2:+45897220 | None:intergenic |
| ACCTAGGTTTGGATTATTAC+TGG | 0.305775 | 4_2:-45892613 | Msa0602340:three_prime_UTR |
| GAAAATTGCTGTGGAGCTTA+TGG | 0.307792 | 4_2:-45896623 | Msa0602340:CDS |
| ACGATGAAGGTCCAGTTGTT+AGG | 0.314851 | 4_2:-45896786 | Msa0602340:CDS |
| GACTACTCCAAAAGTCTTAT+GGG | 0.321935 | 4_2:-45894393 | Msa0602340:CDS |
| AAAGACGGCGGTGGAGGAGG+AGG | 0.332308 | 4_2:+45897074 | None:intergenic |
| GGTGAGAGTGTTTCTTTGGC+TGG | 0.336538 | 4_2:-45896724 | Msa0602340:CDS |
| CAACATGCCGGTGGAGGATT+GGG | 0.338560 | 4_2:-45896875 | Msa0602340:CDS |
| GAGAGGTGAGAGTGTTTCTT+TGG | 0.346695 | 4_2:-45896728 | Msa0602340:CDS |
| GGTCGCTACACTACTTAATA+AGG | 0.351100 | 4_2:-45894874 | Msa0602340:CDS |
| TCGGATTCATGATCAGAAAA+TGG | 0.356858 | 4_2:-45896911 | Msa0602340:CDS |
| AACATGTTCTTGTCCACTTT+GGG | 0.363932 | 4_2:-45892757 | Msa0602340:CDS |
| GGGAAGCGGAGAGGGCTTCT+TGG | 0.365112 | 4_2:+45897115 | None:intergenic |
| AAATCTTCTGATGGAGGGTT+AGG | 0.366932 | 4_2:+45894258 | None:intergenic |
| TGAAACTTGTGTCATTTGTT+TGG | 0.367099 | 4_2:-45894706 | Msa0602340:CDS |
| TTAAAATAAACCCTAACAAC+TGG | 0.367871 | 4_2:+45896775 | None:intergenic |
| TTTCAACGCTGTTATTGCTT+TGG | 0.369027 | 4_2:-45896587 | Msa0602340:CDS |
| TTGTTCTTGGGTTGAGTCCA+TGG | 0.371722 | 4_2:+45897233 | None:intergenic |
| CAACATGTTCTTGTCCACTT+TGG | 0.375533 | 4_2:-45892758 | Msa0602340:CDS |
| GACGGCGGTGGAGGAGGAGG+AGG | 0.379616 | 4_2:+45897077 | None:intergenic |
| CTTCAGCAAGTTCAATCATA+TGG | 0.382234 | 4_2:+45894181 | None:intergenic |
| TGATGAGGATAATTTGATAT+TGG | 0.382450 | 4_2:-45896680 | Msa0602340:CDS |
| GAAATTTCTAAAGCTGTTGT+TGG | 0.383425 | 4_2:-45896658 | Msa0602340:CDS |
| GTCAAAGTCTTGTTGTTCTT+GGG | 0.385156 | 4_2:+45897221 | None:intergenic |
| AGACTTTGACTTCTTGTTAA+CGG | 0.385702 | 4_2:-45897208 | Msa0602340:CDS |
| TTCTTTCGAGTTCTTGTAGC+TGG | 0.387934 | 4_2:+45897004 | None:intergenic |
| TGACTAGCTTGACCTAGGTT+TGG | 0.389684 | 4_2:-45892624 | Msa0602340:three_prime_UTR |
| GATAATTTCGAGAAACCGTT+TGG | 0.389894 | 4_2:-45896841 | Msa0602340:CDS |
| TCAACATGCCGGTGGAGGAT+TGG | 0.399904 | 4_2:-45896876 | Msa0602340:CDS |
| GAGCTTATGGCTTTGATTGA+AGG | 0.406533 | 4_2:-45896610 | Msa0602340:CDS |
| AGTGTTTCTTTGGCTGGGAT+TGG | 0.411786 | 4_2:-45896718 | Msa0602340:CDS |
| TGGTCAGTTAAGTGGAAAAT+GGG | 0.412108 | 4_2:-45894913 | Msa0602340:intron |
| CGATGAAGGTCCAGTTGTTA+GGG | 0.412132 | 4_2:-45896785 | Msa0602340:CDS |
| GGTGGAGGATTGGGATGAAT+GGG | 0.417241 | 4_2:-45896866 | Msa0602340:CDS |
| CGGTGGAGGATTGGGATGAA+TGG | 0.418354 | 4_2:-45896867 | Msa0602340:CDS |
| GGAGGAAGGTTGGTCGATGA+GGG | 0.427531 | 4_2:+45897095 | None:intergenic |
| TTAAGTAGTGTAGCGACCTT+CGG | 0.437588 | 4_2:+45894879 | None:intergenic |
| TTTGGTGAAGGGACGTCGTC+GGG | 0.440861 | 4_2:-45896823 | Msa0602340:CDS |
| TCATGCCTCGCCACAAGCCT+TGG | 0.442248 | 4_2:+45894816 | None:intergenic |
| TTCTTGTCCACTTTGGGAAG+AGG | 0.461434 | 4_2:-45892751 | Msa0602340:CDS |
| GACATCAATGCAGAGCATCT+TGG | 0.465768 | 4_2:+45894432 | None:intergenic |
| GTGAGAGTGTTTCTTTGGCT+GGG | 0.465990 | 4_2:-45896723 | Msa0602340:CDS |
| TGGAGGATTGGGATGAATGG+GGG | 0.467343 | 4_2:-45896864 | Msa0602340:CDS |
| AGATTATTAGTATAAGTAAC+TGG | 0.467563 | 4_2:-45892652 | Msa0602340:exon |
| AATGCAGAGCATCTTGGATA+AGG | 0.468088 | 4_2:+45894438 | None:intergenic |
| AAATTTCTAAAGCTGTTGTT+GGG | 0.468942 | 4_2:-45896657 | Msa0602340:CDS |
| GGAGGATTGGGATGAATGGG+GGG | 0.471014 | 4_2:-45896863 | Msa0602340:CDS |
| AGGAGGAAGGTTGGTCGATG+AGG | 0.472445 | 4_2:+45897094 | None:intergenic |
| TTCGAGAAAGACGGCGGTGG+AGG | 0.476156 | 4_2:+45897068 | None:intergenic |
| GTGGAGGATTGGGATGAATG+GGG | 0.479282 | 4_2:-45896865 | Msa0602340:CDS |
| TCGAGAAACCGTTTGGTGAA+GGG | 0.481668 | 4_2:-45896834 | Msa0602340:CDS |
| CTCCAAATTTCGTTGCTGCA+TGG | 0.488613 | 4_2:+45894494 | None:intergenic |
| GAGAAAGACGGCGGTGGAGG+AGG | 0.492225 | 4_2:+45897071 | None:intergenic |
| TTCAACTTAAAATCTTCTGA+TGG | 0.501863 | 4_2:+45894249 | None:intergenic |
| GTCGATGAGGGAAGCGGAGA+GGG | 0.503652 | 4_2:+45897107 | None:intergenic |
| CAGGGAACAGTTACAGTCCA+TGG | 0.505375 | 4_2:-45897250 | None:intergenic |
| TTCGAGAAACCGTTTGGTGA+AGG | 0.506356 | 4_2:-45896835 | Msa0602340:CDS |
| GACGACGTCCCTTCACCAAA+CGG | 0.510172 | 4_2:+45896826 | None:intergenic |
| TGACATGTTATACCTACAAA+AGG | 0.516724 | 4_2:-45894287 | Msa0602340:CDS |
| AACTTAAAATCTTCTGATGG+AGG | 0.519846 | 4_2:+45894252 | None:intergenic |
| AGTTGAAGTCTCTGGCATCA+AGG | 0.520502 | 4_2:-45894233 | Msa0602340:CDS |
| TCGACGAGGCGGAACGATGA+AGG | 0.523355 | 4_2:-45896799 | Msa0602340:CDS |
| TGGCATCAAGGAGTCTTTGG+AGG | 0.524698 | 4_2:-45894221 | Msa0602340:CDS |
| GTTGAAAACGGAGTCGGAGA+TGG | 0.525304 | 4_2:+45897038 | None:intergenic |
| GCTACAAGAACTCGAAAGAA+TGG | 0.526817 | 4_2:-45897001 | Msa0602340:CDS |
| CACCGGCATGTTGAAAATCT+CGG | 0.530826 | 4_2:+45896885 | None:intergenic |
| ATTGTAAGCGAAATCGAGAT+CGG | 0.531400 | 4_2:+45897146 | None:intergenic |
| ACTTAAAATCTTCTGATGGA+GGG | 0.531502 | 4_2:+45894253 | None:intergenic |
| GGCATGTTGGCACCATTCCA+TGG | 0.534169 | 4_2:+45894589 | None:intergenic |
| CATCCCTCATGAGGGCATGT+TGG | 0.535618 | 4_2:+45894576 | None:intergenic |
| TAAGGGTTTAGTGAGTGAGG+AGG | 0.536413 | 4_2:-45896755 | Msa0602340:CDS |
| AAAACGGAGTCGGAGATGGA+TGG | 0.537187 | 4_2:+45897042 | None:intergenic |
| CAGTTGATGGCTGTCAACAC+AGG | 0.537949 | 4_2:-45894656 | Msa0602340:CDS |
| CTGTTGTTGGGAATGAAAGT+AGG | 0.538085 | 4_2:-45896645 | Msa0602340:CDS |
| ACTCACGGTGGCGGAATCCA+TGG | 0.542089 | 4_2:-45897172 | Msa0602340:CDS |
| GCTAGATTCAGCAGGCCTCA+TGG | 0.542852 | 4_2:+45894746 | None:intergenic |
| GGCGCAACGCCACGAACTCA+CGG | 0.545514 | 4_2:-45897187 | Msa0602340:CDS |
| TCATTCTTGCATCCCTCATG+AGG | 0.546847 | 4_2:+45894567 | None:intergenic |
| ATTCCGCCACCGTGAGTTCG+TGG | 0.547693 | 4_2:+45897178 | None:intergenic |
| CATGCAGCAACGAAATTTGG+AGG | 0.554837 | 4_2:-45894493 | Msa0602340:CDS |
| ACGCCACGAACTCACGGTGG+CGG | 0.555818 | 4_2:-45897181 | Msa0602340:CDS |
| GAGAGAGTTAGCGTTGAAAA+CGG | 0.559178 | 4_2:+45897026 | None:intergenic |
| CAACTTGACTAGCTTGACCT+AGG | 0.561428 | 4_2:-45892629 | Msa0602340:three_prime_UTR |
| AACTTGTGTCATTTGTTTGG+AGG | 0.561454 | 4_2:-45894703 | Msa0602340:CDS |
| GTTTGGTGAAGGGACGTCGT+CGG | 0.563723 | 4_2:-45896824 | Msa0602340:CDS |
| TTTACACCGCTAGATTCAGC+AGG | 0.565712 | 4_2:+45894738 | None:intergenic |
| GTTTCGGCTGCAAGGTTCCG+TGG | 0.568651 | 4_2:-45894320 | Msa0602340:CDS |
| GTTGCTACCACATGACATGC+AGG | 0.571834 | 4_2:-45894158 | Msa0602340:intron |
| GTCTTCGAGAAAGACGGCGG+TGG | 0.574602 | 4_2:+45897065 | None:intergenic |
| AAGAAATGTGTAAAATGTCA+TGG | 0.575908 | 4_2:-45894351 | Msa0602340:CDS |
| AGATCGTGATGATGATGAAG+AGG | 0.576559 | 4_2:-45892712 | Msa0602340:CDS |
| CATTCATCCCAATCCTCCAC+CGG | 0.577173 | 4_2:+45896868 | None:intergenic |
| AAACGGAGTCGGAGATGGAT+GGG | 0.577431 | 4_2:+45897043 | None:intergenic |
| TTACTGCAGTCCAAGGCTTG+TGG | 0.578524 | 4_2:-45894826 | Msa0602340:CDS |
| GTTCTGATGAAGAGGACTAC+AGG | 0.579963 | 4_2:-45892683 | Msa0602340:CDS |
| TGTTGCTGTTTGTGATGATG+AGG | 0.583207 | 4_2:-45896695 | Msa0602340:CDS |
| AATTTGCTTACTGCAGTCCA+AGG | 0.585420 | 4_2:-45894833 | Msa0602340:CDS |
| GAAATCGAGATCGGATTCCA+TGG | 0.587184 | 4_2:+45897155 | None:intergenic |
| ATATTGTCCTCTTCCCAAAG+TGG | 0.589871 | 4_2:+45892744 | None:intergenic |
| TGGCAATCGAGATGAACGAC+AGG | 0.590211 | 4_2:-45896981 | Msa0602340:CDS |
| GGACTACCGTTCTGATGAAG+AGG | 0.592970 | 4_2:-45892691 | Msa0602340:CDS |
| GTGAGTGAGGAGGTTGTGAG+AGG | 0.594469 | 4_2:-45896745 | Msa0602340:CDS |
| GGTGCCAACATGCCCTCATG+AGG | 0.596754 | 4_2:-45894580 | Msa0602340:CDS |
| GGATGGGTCTTCGAGAAAGA+CGG | 0.604880 | 4_2:+45897059 | None:intergenic |
| GGTGAAGTTGCTCCATGGAA+TGG | 0.606666 | 4_2:-45894601 | Msa0602340:CDS |
| CATTCTTGCATCCCTCATGA+GGG | 0.608069 | 4_2:+45894568 | None:intergenic |
| TGCAAGGTTCCGTGGCATAG+TGG | 0.608373 | 4_2:-45894312 | Msa0602340:CDS |
| AGGTTGGTCGATGAGGGAAG+CGG | 0.613007 | 4_2:+45897101 | None:intergenic |
| GTGGAGGTGAAGTTGCTCCA+TGG | 0.619820 | 4_2:-45894606 | Msa0602340:CDS |
| GGTCGATGAGGGAAGCGGAG+AGG | 0.626159 | 4_2:+45897106 | None:intergenic |
| GCAGTCCAAGGCTTGTGGCG+AGG | 0.628647 | 4_2:-45894821 | Msa0602340:CDS |
| TAAATGTGGAGCTGAGTGGA+GGG | 0.630494 | 4_2:-45892790 | Msa0602340:CDS |
| GGTATTGCTTGTCTTGCATG+AGG | 0.631054 | 4_2:-45894635 | Msa0602340:CDS |
| CATATGATTGAACTTGCTGA+AGG | 0.640994 | 4_2:-45894180 | Msa0602340:CDS |
| ACCAGTAATAATCCAAACCT+AGG | 0.646264 | 4_2:+45892612 | None:intergenic |
| GTTAGCGTTGAAAACGGAGT+CGG | 0.649356 | 4_2:+45897032 | None:intergenic |
| GTCTTGCATGAGGCAACATG+TGG | 0.659146 | 4_2:-45894625 | Msa0602340:CDS |
| TAGAGTACCTGCATGTCATG+TGG | 0.660971 | 4_2:+45894151 | None:intergenic |
| TGTAGTCCTCTTCATCAGAA+CGG | 0.663266 | 4_2:+45892685 | None:intergenic |
| TGAAAGTAGGAAAATTGCTG+TGG | 0.668978 | 4_2:-45896632 | Msa0602340:CDS |
| ATAAATGTGGAGCTGAGTGG+AGG | 0.671440 | 4_2:-45892791 | Msa0602340:CDS |
| GGACGTCGTCGGGTTCGACG+AGG | 0.671996 | 4_2:-45896813 | Msa0602340:CDS |
| CGTCGTCGGGTTCGACGAGG+CGG | 0.673668 | 4_2:-45896810 | Msa0602340:CDS |
| TTGCATGAGGCAACATGTGG+AGG | 0.673807 | 4_2:-45894622 | Msa0602340:CDS |
| GCTATAAATGTGGAGCTGAG+TGG | 0.679724 | 4_2:-45892794 | Msa0602340:CDS |
| AGAAGGACGATCTCAACCGT+CGG | 0.683370 | 4_2:-45896930 | Msa0602340:CDS |
| ATGAGGCCTGCTGAATCTAG+CGG | 0.684150 | 4_2:-45894744 | Msa0602340:CDS |
| CATGTCATACCACTATGCCA+CGG | 0.686231 | 4_2:+45894303 | None:intergenic |
| ATGGGCTTCGAAACAGCCGA+AGG | 0.691008 | 4_2:-45894895 | Msa0602340:CDS |
| CAATTGTTTCTCAATCCATG+AGG | 0.697517 | 4_2:-45894761 | Msa0602340:CDS |
| GTGCCAACATGCCCTCATGA+GGG | 0.700338 | 4_2:-45894579 | Msa0602340:CDS |
| TGGGTCTTCGAGAAAGACGG+CGG | 0.730901 | 4_2:+45897062 | None:intergenic |
| GCAACGCCACGAACTCACGG+TGG | 0.773826 | 4_2:-45897184 | Msa0602340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTGTATTATTTAATTATTT+TGG | - | chr4_2:45896583-45896602 | Msa0602340:CDS | 10.0% |
| !! | TGTGCAAAATAAAAAAAAAA+TGG | - | chr4_2:45893435-45893454 | Msa0602340:intron | 15.0% |
| !!! | TTCATAATTTATTTTCATGT+TGG | + | chr4_2:45893699-45893718 | None:intergenic | 15.0% |
| !! | TATAAATGATAACATTATAG+AGG | - | chr4_2:45893774-45893793 | Msa0602340:intron | 15.0% |
| !! | ATAAATGATAACATTATAGA+GGG | - | chr4_2:45893775-45893794 | Msa0602340:intron | 15.0% |
| !!! | TTATGTCCATTTTATTTTTT+AGG | - | chr4_2:45894567-45894586 | Msa0602340:CDS | 15.0% |
| !!! | TTTTTAACATCTTGTTTTAT+TGG | - | chr4_2:45894825-45894844 | Msa0602340:CDS | 15.0% |
| !!! | ATATTTTTTATCAAGTTATC+TGG | - | chr4_2:45895741-45895760 | Msa0602340:intron | 15.0% |
| !! | GTTTGTTTATATGATTTAAT+AGG | - | chr4_2:45897235-45897254 | Msa0602340:exon | 15.0% |
| !! | TTTATCCTACAATTAAACTA+GGG | + | chr4_2:45893325-45893344 | None:intergenic | 20.0% |
| !! | AATAAGAAGAATAGATAAGA+TGG | - | chr4_2:45893885-45893904 | Msa0602340:intron | 20.0% |
| !! | TAATGAATTGGATAGAAATA+TGG | - | chr4_2:45893980-45893999 | Msa0602340:intron | 20.0% |
| !! | TATGAACCATAATATATGTA+TGG | - | chr4_2:45894163-45894182 | Msa0602340:CDS | 20.0% |
| !! | TAATGACCATACATATATTA+TGG | + | chr4_2:45894172-45894191 | None:intergenic | 20.0% |
| !! | TCAAAATGACAAAAGATAAT+TGG | - | chr4_2:45894279-45894298 | Msa0602340:CDS | 20.0% |
| !! | TGACAAAAAAAATAAGTGAT+TGG | - | chr4_2:45894317-45894336 | Msa0602340:CDS | 20.0% |
| !! | AACAGTCCTAAAAAATAAAA+TGG | + | chr4_2:45894576-45894595 | None:intergenic | 20.0% |
| !! | TGAAACTTTATAATGCTTAT+TGG | - | chr4_2:45894629-45894648 | Msa0602340:CDS | 20.0% |
| !!! | CTTTTTATTTTTAGGAAGAA+AGG | + | chr4_2:45895692-45895711 | None:intergenic | 20.0% |
| !! | TTCCTAAAAATAAAAAGTCA+GGG | - | chr4_2:45895695-45895714 | Msa0602340:intron | 20.0% |
| !! | ATATTAGTTATTGCAATTGA+AGG | - | chr4_2:45896183-45896202 | Msa0602340:intron | 20.0% |
| !! | ATAATACACTCAAAGTTTAA+AGG | + | chr4_2:45896573-45896592 | None:intergenic | 20.0% |
| !! | ATAATTACAGATGGAAATTA+AGG | - | chr4_2:45896723-45896742 | Msa0602340:CDS | 20.0% |
| !! | AGATTATTAGTATAAGTAAC+TGG | - | chr4_2:45897106-45897125 | Msa0602340:CDS | 20.0% |
| !!! | GGAAAAGTATTATTTTTTGA+TGG | - | chr4_2:45897194-45897213 | Msa0602340:CDS | 20.0% |
| ! | TTAAAATAAACCCTAACAAC+TGG | + | chr4_2:45892986-45893005 | None:intergenic | 25.0% |
| !!! | AGTTGTTAGGGTTTATTTTA+AGG | - | chr4_2:45892985-45893004 | Msa0602340:intron | 25.0% |
| !!! | GTTGTTAGGGTTTATTTTAA+GGG | - | chr4_2:45892986-45893005 | Msa0602340:intron | 25.0% |
| ! | TGATGAGGATAATTTGATAT+TGG | - | chr4_2:45893078-45893097 | Msa0602340:intron | 25.0% |
| !!! | AAATTTCTAAAGCTGTTGTT+GGG | - | chr4_2:45893101-45893120 | Msa0602340:intron | 25.0% |
| !!! | TTGAAGCGTGTTATTTATTT+TGG | - | chr4_2:45893196-45893215 | Msa0602340:intron | 25.0% |
| ! | CTTTATCCTACAATTAAACT+AGG | + | chr4_2:45893326-45893345 | None:intergenic | 25.0% |
| ! | ATACATTGTTATGCTAAACT+TGG | - | chr4_2:45893363-45893382 | Msa0602340:intron | 25.0% |
| !!! | TTTTTTATTTTGCACACACA+AGG | + | chr4_2:45893431-45893450 | None:intergenic | 25.0% |
| !! | AAAGTACCATTCAAGTTAAA+GGG | - | chr4_2:45893607-45893626 | Msa0602340:intron | 25.0% |
| !! | AGTTAAAGGGTGAATTTTAT+CGG | - | chr4_2:45893620-45893639 | Msa0602340:intron | 25.0% |
| ! | TGTTATATGGAACAAATTGT+TGG | - | chr4_2:45893662-45893681 | Msa0602340:intron | 25.0% |
| ! | GTTATATGGAACAAATTGTT+GGG | - | chr4_2:45893663-45893682 | Msa0602340:intron | 25.0% |
| ! | AATTATGAATAGTAGAGATG+AGG | - | chr4_2:45893710-45893729 | Msa0602340:intron | 25.0% |
| ! | AGATCTAGAGATTAATGAAT+TGG | - | chr4_2:45893968-45893987 | Msa0602340:intron | 25.0% |
| ! | AATGACAAAAGATAATTGGA+TGG | - | chr4_2:45894283-45894302 | Msa0602340:CDS | 25.0% |
| ! | ATAACGCTTATTGATAAGTT+AGG | - | chr4_2:45894693-45894712 | Msa0602340:CDS | 25.0% |
| !!! | GATAATGTTGTCTTTTTTTG+TGG | - | chr4_2:45894799-45894818 | Msa0602340:CDS | 25.0% |
| !!! | AGTCAATTTTTTTCAGTTGA+TGG | - | chr4_2:45895089-45895108 | Msa0602340:intron | 25.0% |
| !!! | ATTTTGAAGTCAAGAATTTC+CGG | + | chr4_2:45895235-45895254 | None:intergenic | 25.0% |
| !! | TGACATTTTACACATTTCTT+GGG | + | chr4_2:45895407-45895426 | None:intergenic | 25.0% |
| !! | ATGACATTTTACACATTTCT+TGG | + | chr4_2:45895408-45895427 | None:intergenic | 25.0% |
| ! | AAGAAATGTGTAAAATGTCA+TGG | - | chr4_2:45895407-45895426 | Msa0602340:intron | 25.0% |
| ! | TTCAACTTAAAATCTTCTGA+TGG | + | chr4_2:45895512-45895531 | None:intergenic | 25.0% |
| ! | CTTCCTAAAAATAAAAAGTC+AGG | - | chr4_2:45895694-45895713 | Msa0602340:intron | 25.0% |
| ! | GCAAAAGAAAAATATCATTC+AGG | + | chr4_2:45896010-45896029 | None:intergenic | 25.0% |
| ! | ATTGTTAACCATTGAATACT+GGG | + | chr4_2:45896119-45896138 | None:intergenic | 25.0% |
| ! | AATTGTTAACCATTGAATAC+TGG | + | chr4_2:45896120-45896139 | None:intergenic | 25.0% |
| ! | TACGTACATACATAAAGTAT+GGG | + | chr4_2:45896150-45896169 | None:intergenic | 25.0% |
| ! | ATACGTACATACATAAAGTA+TGG | + | chr4_2:45896151-45896170 | None:intergenic | 25.0% |
| !! | TTTTCTAATTGATACTGATC+AGG | - | chr4_2:45896397-45896416 | Msa0602340:intron | 25.0% |
| ! | CTATATAGTATAAACAGTAG+CGG | + | chr4_2:45896634-45896653 | None:intergenic | 25.0% |
| !! | AATTTTATGTGTATTGTGAG+AGG | - | chr4_2:45896689-45896708 | Msa0602340:CDS | 25.0% |
| ! | TAAGGAAAGATTATTTGACA+AGG | - | chr4_2:45896741-45896760 | Msa0602340:CDS | 25.0% |
| ! | GTGTTTATAATCACAACATT+TGG | - | chr4_2:45896852-45896871 | Msa0602340:CDS | 25.0% |
| ! | AACCATGTATAATGATAACA+TGG | + | chr4_2:45896902-45896921 | None:intergenic | 25.0% |
| !!! | TTCGAATTTTGCTATAAATG+TGG | - | chr4_2:45896954-45896973 | Msa0602340:CDS | 25.0% |
| !!! | TTTTGATGGATTTTTTGCAA+TGG | - | chr4_2:45897208-45897227 | Msa0602340:CDS | 25.0% |
| ! | AGACTTTGACTTCTTGTTAA+CGG | - | chr4_2:45892550-45892569 | Msa0602340:three_prime_UTR | 30.0% |
| !! | GAAATTTCTAAAGCTGTTGT+TGG | - | chr4_2:45893100-45893119 | Msa0602340:intron | 30.0% |
| TAAACCATTGAATTCAAGCT+GGG | - | chr4_2:45893541-45893560 | Msa0602340:intron | 30.0% | |
| !! | CTTTAACTTGAATGGTACTT+TGG | + | chr4_2:45893608-45893627 | None:intergenic | 30.0% |
| ! | CAAAGTACCATTCAAGTTAA+AGG | - | chr4_2:45893606-45893625 | Msa0602340:intron | 30.0% |
| !! | AATTCACCCTTTAACTTGAA+TGG | + | chr4_2:45893616-45893635 | None:intergenic | 30.0% |
| TTTGTTCCATATAACATCGT+CGG | + | chr4_2:45893658-45893677 | None:intergenic | 30.0% | |
| TGGTAAATGATAGAGCTTTA+TGG | - | chr4_2:45894000-45894019 | Msa0602340:intron | 30.0% | |
| TTCCATATTATAGCAGTTAC+CGG | + | chr4_2:45894519-45894538 | None:intergenic | 30.0% | |
| !!! | GGACTGTTTTTGTTTTAATG+TGG | - | chr4_2:45894588-45894607 | Msa0602340:CDS | 30.0% |
| !!! | AATGTTGTCTTTTTTTGTGG+AGG | - | chr4_2:45894802-45894821 | Msa0602340:CDS | 30.0% |
| !! | TGTTTTATTGGTCAGTTAAG+TGG | - | chr4_2:45894837-45894856 | Msa0602340:CDS | 30.0% |
| !! | TGAAACTTGTGTCATTTGTT+TGG | - | chr4_2:45895052-45895071 | Msa0602340:intron | 30.0% |
| ! | CAGTAAATTTTCTCAGTAAC+TGG | + | chr4_2:45895299-45895318 | None:intergenic | 30.0% |
| TGACATGTTATACCTACAAA+AGG | - | chr4_2:45895471-45895490 | Msa0602340:intron | 30.0% | |
| ACTTAAAATCTTCTGATGGA+GGG | + | chr4_2:45895508-45895527 | None:intergenic | 30.0% | |
| AACTTAAAATCTTCTGATGG+AGG | + | chr4_2:45895509-45895528 | None:intergenic | 30.0% | |
| !!! | AGATTTTAAGTTGAAGTCTC+TGG | - | chr4_2:45895517-45895536 | Msa0602340:intron | 30.0% |
| !!! | CTCCCTGACTTTTTATTTTT+AGG | + | chr4_2:45895700-45895719 | None:intergenic | 30.0% |
| TGTGATGAGCAAGTATTATT+TGG | - | chr4_2:45895779-45895798 | Msa0602340:intron | 30.0% | |
| GTGATGAGCAAGTATTATTT+GGG | - | chr4_2:45895780-45895799 | Msa0602340:intron | 30.0% | |
| !! | TTGGGATTTAATTTGCTTAC+TGG | - | chr4_2:45895798-45895817 | Msa0602340:intron | 30.0% |
| ! | AGCCTCATGTTTTCTATTAA+CGG | - | chr4_2:45895850-45895869 | Msa0602340:intron | 30.0% |
| AACCGTTAATAGAAAACATG+AGG | + | chr4_2:45895855-45895874 | None:intergenic | 30.0% | |
| TGAACATGTATAACATAACG+TGG | + | chr4_2:45895904-45895923 | None:intergenic | 30.0% | |
| ATTGCAATTGAAGGATTCTA+CGG | - | chr4_2:45896192-45896211 | Msa0602340:intron | 30.0% | |
| !!! | TTCGAGTGATTTTTAAGTGT+CGG | + | chr4_2:45896222-45896241 | None:intergenic | 30.0% |
| !!! | TTCAGGATATTTTCAAGTTC+TGG | - | chr4_2:45896496-45896515 | Msa0602340:intron | 30.0% |
| ! | AAAGGTATACATGATTTCAG+TGG | + | chr4_2:45896555-45896574 | None:intergenic | 30.0% |
| GGAAAATATATCTAGTTGTC+AGG | - | chr4_2:45896762-45896781 | Msa0602340:CDS | 30.0% | |
| AGTTTACAGATTTCCATGAA+TGG | - | chr4_2:45896814-45896833 | Msa0602340:CDS | 30.0% | |
| CTTGTTGCTAATTTCATTTG+TGG | - | chr4_2:45896875-45896894 | Msa0602340:CDS | 30.0% | |
| GTCCATGTTATCATTATACA+TGG | - | chr4_2:45896897-45896916 | Msa0602340:CDS | 30.0% | |
| !! | GTCAAAGTCTTGTTGTTCTT+GGG | + | chr4_2:45892540-45892559 | None:intergenic | 35.0% |
| !! | AGTCAAAGTCTTGTTGTTCT+TGG | + | chr4_2:45892541-45892560 | None:intergenic | 35.0% |
| ATTGTAAGCGAAATCGAGAT+CGG | + | chr4_2:45892615-45892634 | None:intergenic | 35.0% | |
| AAAAACAATGCGTGAAGAGA+AGG | - | chr4_2:45892811-45892830 | Msa0602340:CDS | 35.0% | |
| ! | TTTTCTGATCATGAATCCGA+CGG | + | chr4_2:45892847-45892866 | None:intergenic | 35.0% |
| TCGGATTCATGATCAGAAAA+TGG | - | chr4_2:45892847-45892866 | Msa0602340:intron | 35.0% | |
| GATAATTTCGAGAAACCGTT+TGG | - | chr4_2:45892917-45892936 | Msa0602340:intron | 35.0% | |
| !! | TTTTAAGGGTTTAGTGAGTG+AGG | - | chr4_2:45893000-45893019 | Msa0602340:intron | 35.0% |
| TGAAAGTAGGAAAATTGCTG+TGG | - | chr4_2:45893126-45893145 | Msa0602340:intron | 35.0% | |
| TTTCAACGCTGTTATTGCTT+TGG | - | chr4_2:45893171-45893190 | Msa0602340:intron | 35.0% | |
| ATGCACCCTAGTTTAATTGT+AGG | - | chr4_2:45893317-45893336 | Msa0602340:intron | 35.0% | |
| !! | TTATTTTGCACACACAAGGA+GGG | + | chr4_2:45893427-45893446 | None:intergenic | 35.0% |
| !!! | TTTATTTTGCACACACAAGG+AGG | + | chr4_2:45893428-45893447 | None:intergenic | 35.0% |
| ! | ATGGAATGTGTTGTTGTGTT+TGG | - | chr4_2:45893454-45893473 | Msa0602340:intron | 35.0% |
| ! | TGGAATGTGTTGTTGTGTTT+GGG | - | chr4_2:45893455-45893474 | Msa0602340:intron | 35.0% |
| GTAAACCATTGAATTCAAGC+TGG | - | chr4_2:45893540-45893559 | Msa0602340:intron | 35.0% | |
| GATAACATTATAGAGGGAGT+TGG | - | chr4_2:45893781-45893800 | Msa0602340:intron | 35.0% | |
| GAAGATAGACTTAGGTGATT+TGG | - | chr4_2:45893832-45893851 | Msa0602340:intron | 35.0% | |
| GAGAATACTCAAATCACTAG+AGG | - | chr4_2:45893907-45893926 | Msa0602340:intron | 35.0% | |
| ATAAGTCGAGATTCAAACCA+TGG | - | chr4_2:45894087-45894106 | Msa0602340:intron | 35.0% | |
| ! | ACAGAGTGATTTGTGTTGAT+TGG | - | chr4_2:45894419-45894438 | Msa0602340:CDS | 35.0% |
| ACCATGTACATAATTCGAAC+CGG | - | chr4_2:45894497-45894516 | Msa0602340:CDS | 35.0% | |
| AACCGGTAACTGCTATAATA+TGG | - | chr4_2:45894514-45894533 | Msa0602340:CDS | 35.0% | |
| AAAGTACAATTCAAGCCAAG+TGG | + | chr4_2:45894738-45894757 | None:intergenic | 35.0% | |
| ! | TTGATGCGTGTTTAAGATGA+TGG | - | chr4_2:45894760-45894779 | Msa0602340:CDS | 35.0% |
| ! | TGATGCGTGTTTAAGATGAT+GGG | - | chr4_2:45894761-45894780 | Msa0602340:CDS | 35.0% |
| TTGGTCAGTTAAGTGGAAAA+TGG | - | chr4_2:45894844-45894863 | Msa0602340:CDS | 35.0% | |
| TGGTCAGTTAAGTGGAAAAT+GGG | - | chr4_2:45894845-45894864 | Msa0602340:CDS | 35.0% | |
| ! | CAATTGTTTCTCAATCCATG+AGG | - | chr4_2:45894997-45895016 | Msa0602340:intron | 35.0% |
| !! | AACTTGTGTCATTTGTTTGG+AGG | - | chr4_2:45895055-45895074 | Msa0602340:intron | 35.0% |
| AGACTACTCCAAAAGTCTTA+TGG | - | chr4_2:45895364-45895383 | Msa0602340:intron | 35.0% | |
| ! | GACTACTCCAAAAGTCTTAT+GGG | - | chr4_2:45895365-45895384 | Msa0602340:intron | 35.0% |
| ! | TGTCATGGTCTTTTCTGTTT+CGG | - | chr4_2:45895422-45895441 | Msa0602340:intron | 35.0% |
| ! | GTTAGGATTCAACCTTTTGT+AGG | + | chr4_2:45895486-45895505 | None:intergenic | 35.0% |
| CTTCAGCAAGTTCAATCATA+TGG | + | chr4_2:45895580-45895599 | None:intergenic | 35.0% | |
| !! | CATATGATTGAACTTGCTGA+AGG | - | chr4_2:45895578-45895597 | Msa0602340:intron | 35.0% |
| TACTGGAGCTTCTTATAAAC+AGG | - | chr4_2:45895815-45895834 | Msa0602340:intron | 35.0% | |
| ACTGGAGCTTCTTATAAACA+GGG | - | chr4_2:45895816-45895835 | Msa0602340:intron | 35.0% | |
| TGCATAAAAATGCTTGACCA+AGG | + | chr4_2:45895966-45895985 | None:intergenic | 35.0% | |
| ! | CAAGCATTTTTATGCAAGTC+AGG | - | chr4_2:45895970-45895989 | Msa0602340:intron | 35.0% |
| CCTTATAGTTATGTGTGCAA+TGG | + | chr4_2:45896037-45896056 | None:intergenic | 35.0% | |
| CCATTGCACACATAACTATA+AGG | - | chr4_2:45896034-45896053 | Msa0602340:intron | 35.0% | |
| TGACATTGAACTTCTTCCAA+GGG | + | chr4_2:45896268-45896287 | None:intergenic | 35.0% | |
| TGTCTCACTCATCAAAACAA+GGG | + | chr4_2:45896292-45896311 | None:intergenic | 35.0% | |
| !!! | TTCCTTTCCTTTTTTCGCAT+TGG | + | chr4_2:45896330-45896349 | None:intergenic | 35.0% |
| AGGTCATCATCTCACTTATT+AGG | - | chr4_2:45896417-45896436 | Msa0602340:intron | 35.0% | |
| TCATCTCACTTATTAGGTCA+AGG | - | chr4_2:45896423-45896442 | Msa0602340:intron | 35.0% | |
| GAAACTCCAATGACAATTCA+AGG | + | chr4_2:45896479-45896498 | None:intergenic | 35.0% | |
| TGAATTGTCATTGGAGTTTC+AGG | - | chr4_2:45896479-45896498 | Msa0602340:intron | 35.0% | |
| GATTTCAGTGGCAAAATCTA+CGG | + | chr4_2:45896543-45896562 | None:intergenic | 35.0% | |
| GAGGTTGCTATAATTACAGA+TGG | - | chr4_2:45896714-45896733 | Msa0602340:CDS | 35.0% | |
| ! | TCATATGTTGATTGCAGATG+CGG | - | chr4_2:45896930-45896949 | Msa0602340:CDS | 35.0% |
| AACATGTTCTTGTCCACTTT+GGG | - | chr4_2:45897001-45897020 | Msa0602340:CDS | 35.0% | |
| TTTGGGAAGAGGACAATATT+TGG | - | chr4_2:45897018-45897037 | Msa0602340:CDS | 35.0% | |
| ACCTAGGTTTGGATTATTAC+TGG | - | chr4_2:45897145-45897164 | Msa0602340:CDS | 35.0% | |
| ACCAGTAATAATCCAAACCT+AGG | + | chr4_2:45897149-45897168 | None:intergenic | 35.0% | |
| ! | GAGAGAGTTAGCGTTGAAAA+CGG | + | chr4_2:45892735-45892754 | None:intergenic | 40.0% |
| !! | TTCTTTCGAGTTCTTGTAGC+TGG | + | chr4_2:45892757-45892776 | None:intergenic | 40.0% |
| GCTACAAGAACTCGAAAGAA+TGG | - | chr4_2:45892757-45892776 | Msa0602340:CDS | 40.0% | |
| !! | TGTTGCTGTTTGTGATGATG+AGG | - | chr4_2:45893063-45893082 | Msa0602340:intron | 40.0% |
| CTGTTGTTGGGAATGAAAGT+AGG | - | chr4_2:45893113-45893132 | Msa0602340:intron | 40.0% | |
| GAAAATTGCTGTGGAGCTTA+TGG | - | chr4_2:45893135-45893154 | Msa0602340:intron | 40.0% | |
| !! | GAGCTTATGGCTTTGATTGA+AGG | - | chr4_2:45893148-45893167 | Msa0602340:intron | 40.0% |
| TTGGACATACATAATGCCAG+AGG | - | chr4_2:45893382-45893401 | Msa0602340:intron | 40.0% | |
| ! | TATTTTGCACACACAAGGAG+GGG | + | chr4_2:45893426-45893445 | None:intergenic | 40.0% |
| TGTTGTGTTTGGGAGAAGAT+TGG | - | chr4_2:45893465-45893484 | Msa0602340:intron | 40.0% | |
| GTAAGACCGACGATGTTATA+TGG | - | chr4_2:45893649-45893668 | Msa0602340:intron | 40.0% | |
| ! | AGCACCTATAGTGGAAAAGA+TGG | - | chr4_2:45893807-45893826 | Msa0602340:intron | 40.0% |
| ! | ACCTATAGTGGAAAAGATGG+TGG | - | chr4_2:45893810-45893829 | Msa0602340:intron | 40.0% |
| ! | TCCACCATCTTTTCCACTAT+AGG | + | chr4_2:45893814-45893833 | None:intergenic | 40.0% |
| !! | AGATGGTGGAAGATAGACTT+AGG | - | chr4_2:45893824-45893843 | Msa0602340:intron | 40.0% |
| TACTCAAATCACTAGAGGCA+AGG | - | chr4_2:45893912-45893931 | Msa0602340:intron | 40.0% | |
| ACTCAAATCACTAGAGGCAA+GGG | - | chr4_2:45893913-45893932 | Msa0602340:intron | 40.0% | |
| ! | CTTATCCCACTAAGTTGGAT+CGG | + | chr4_2:45894045-45894064 | None:intergenic | 40.0% |
| TCGAGATTCAAACCATGGAT+TGG | - | chr4_2:45894092-45894111 | Msa0602340:intron | 40.0% | |
| !! | AGATTCAAACCATGGATTGG+AGG | - | chr4_2:45894095-45894114 | Msa0602340:intron | 40.0% |
| ! | TGATTGGCTACAGAAAGTTC+AGG | - | chr4_2:45894333-45894352 | Msa0602340:CDS | 40.0% |
| GAAAGTTCAGGTGTGAAAGT+TGG | - | chr4_2:45894345-45894364 | Msa0602340:CDS | 40.0% | |
| !! | ACCGGTTCGAATTATGTACA+TGG | + | chr4_2:45894501-45894520 | None:intergenic | 40.0% |
| ! | AAGTTAGGAGCATGTGTTCT+TGG | - | chr4_2:45894708-45894727 | Msa0602340:CDS | 40.0% |
| TTAAGTAGTGTAGCGACCTT+CGG | + | chr4_2:45894882-45894901 | None:intergenic | 40.0% | |
| GGTCGCTACACTACTTAATA+AGG | - | chr4_2:45894884-45894903 | Msa0602340:CDS | 40.0% | |
| ! | AATTTGCTTACTGCAGTCCA+AGG | - | chr4_2:45894925-45894944 | Msa0602340:intron | 40.0% |
| ! | AACTTCTAGTTGACAGTTGC+CGG | - | chr4_2:45895213-45895232 | Msa0602340:intron | 40.0% |
| AACCATGCAGCAACGAAATT+TGG | - | chr4_2:45895262-45895281 | Msa0602340:intron | 40.0% | |
| ! | AATGCAGAGCATCTTGGATA+AGG | + | chr4_2:45895323-45895342 | None:intergenic | 40.0% |
| ! | TACAGAGCCCATAAGACTTT+TGG | + | chr4_2:45895375-45895394 | None:intergenic | 40.0% |
| AAATCTTCTGATGGAGGGTT+AGG | + | chr4_2:45895503-45895522 | None:intergenic | 40.0% | |
| GCTCATCACATCATATGACT+CGG | + | chr4_2:45895769-45895788 | None:intergenic | 40.0% | |
| CTGGAGCTTCTTATAAACAG+GGG | - | chr4_2:45895817-45895836 | Msa0602340:intron | 40.0% | |
| TGGAGCTTCTTATAAACAGG+GGG | - | chr4_2:45895818-45895837 | Msa0602340:intron | 40.0% | |
| TAACCATTGAATACTGGGCA+CGG | + | chr4_2:45896114-45896133 | None:intergenic | 40.0% | |
| GACATTGAACTTCTTCCAAG+GGG | + | chr4_2:45896267-45896286 | None:intergenic | 40.0% | |
| GTGACATTGAACTTCTTCCA+AGG | + | chr4_2:45896269-45896288 | None:intergenic | 40.0% | |
| GTCTCACTCATCAAAACAAG+GGG | + | chr4_2:45896291-45896310 | None:intergenic | 40.0% | |
| CTGTCTCACTCATCAAAACA+AGG | + | chr4_2:45896293-45896312 | None:intergenic | 40.0% | |
| GAGTGAGACAGTGATTTGAT+TGG | - | chr4_2:45896302-45896321 | Msa0602340:intron | 40.0% | |
| !! | ATTGGTGCCAATGCGAAAAA+AGG | - | chr4_2:45896320-45896339 | Msa0602340:intron | 40.0% |
| TGCCAATGCGAAAAAAGGAA+AGG | - | chr4_2:45896325-45896344 | Msa0602340:intron | 40.0% | |
| ! | AACAAATGAGTCGAGTGTTG+AGG | - | chr4_2:45896350-45896369 | Msa0602340:intron | 40.0% |
| AGGTACCCACCAAAAGTAAA+AGG | + | chr4_2:45896459-45896478 | None:intergenic | 40.0% | |
| TGGGTACCTTGAATTGTCAT+TGG | - | chr4_2:45896470-45896489 | Msa0602340:intron | 40.0% | |
| TTTGGCCCCTTCAAAGAAAT+CGG | - | chr4_2:45896601-45896620 | Msa0602340:CDS | 40.0% | |
| ATGTGTATTGTGAGAGGAAG+AGG | - | chr4_2:45896695-45896714 | Msa0602340:CDS | 40.0% | |
| !! | ATGACTTGCTTTGCCATTCA+TGG | + | chr4_2:45896830-45896849 | None:intergenic | 40.0% |
| TGAATGGCAAAGCAAGTCAT+TGG | - | chr4_2:45896830-45896849 | Msa0602340:CDS | 40.0% | |
| CTGCAATCAACATATGAGCA+AGG | + | chr4_2:45896927-45896946 | None:intergenic | 40.0% | |
| ! | CATATGTTGATTGCAGATGC+GGG | - | chr4_2:45896931-45896950 | Msa0602340:CDS | 40.0% |
| CAACATGTTCTTGTCCACTT+TGG | - | chr4_2:45897000-45897019 | Msa0602340:CDS | 40.0% | |
| ATATTGTCCTCTTCCCAAAG+TGG | + | chr4_2:45897017-45897036 | None:intergenic | 40.0% | |
| ! | AGATCGTGATGATGATGAAG+AGG | - | chr4_2:45897046-45897065 | Msa0602340:CDS | 40.0% |
| TGTAGTCCTCTTCATCAGAA+CGG | + | chr4_2:45897076-45897095 | None:intergenic | 40.0% | |
| !! | TTGTTCTTGGGTTGAGTCCA+TGG | + | chr4_2:45892528-45892547 | None:intergenic | 45.0% |
| GAAATCGAGATCGGATTCCA+TGG | + | chr4_2:45892606-45892625 | None:intergenic | 45.0% | |
| ! | GTTAGCGTTGAAAACGGAGT+CGG | + | chr4_2:45892729-45892748 | None:intergenic | 45.0% |
| ! | GTCCGAGATTTTCAACATGC+CGG | - | chr4_2:45892871-45892890 | Msa0602340:intron | 45.0% |
| CACCGGCATGTTGAAAATCT+CGG | + | chr4_2:45892876-45892895 | None:intergenic | 45.0% | |
| ! | TTCGAGAAACCGTTTGGTGA+AGG | - | chr4_2:45892923-45892942 | Msa0602340:intron | 45.0% |
| ! | TCGAGAAACCGTTTGGTGAA+GGG | - | chr4_2:45892924-45892943 | Msa0602340:intron | 45.0% |
| ACGATGAAGGTCCAGTTGTT+AGG | - | chr4_2:45892972-45892991 | Msa0602340:intron | 45.0% | |
| CGATGAAGGTCCAGTTGTTA+GGG | - | chr4_2:45892973-45892992 | Msa0602340:intron | 45.0% | |
| TAAGGGTTTAGTGAGTGAGG+AGG | - | chr4_2:45893003-45893022 | Msa0602340:intron | 45.0% | |
| !! | GAGAGGTGAGAGTGTTTCTT+TGG | - | chr4_2:45893030-45893049 | Msa0602340:intron | 45.0% |
| !! | GTGAGAGTGTTTCTTTGGCT+GGG | - | chr4_2:45893035-45893054 | Msa0602340:intron | 45.0% |
| AGTGTTTCTTTGGCTGGGAT+TGG | - | chr4_2:45893040-45893059 | Msa0602340:intron | 45.0% | |
| ! | ATTTTGCACACACAAGGAGG+GGG | + | chr4_2:45893425-45893444 | None:intergenic | 45.0% |
| ACCATTGAATTCAAGCTGGG+TGG | - | chr4_2:45893544-45893563 | Msa0602340:intron | 45.0% | |
| ACCACCCAGCTTGAATTCAA+TGG | + | chr4_2:45893548-45893567 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr4_2:45893553-45893572 | Msa0602340:intron | 45.0% | |
| TGGGTGGTTGAAATGGAAGA+GGG | - | chr4_2:45893560-45893579 | Msa0602340:intron | 45.0% | |
| ATGAGTAGTGAGACTGGAAG+AGG | - | chr4_2:45893745-45893764 | Msa0602340:intron | 45.0% | |
| AGTTGGAGTAGCACCTATAG+TGG | - | chr4_2:45893798-45893817 | Msa0602340:intron | 45.0% | |
| ! | ACTAAGTTGGATCGGCTACA+TGG | + | chr4_2:45894037-45894056 | None:intergenic | 45.0% |
| ATGTAGCCGATCCAACTTAG+TGG | - | chr4_2:45894036-45894055 | Msa0602340:intron | 45.0% | |
| TGTAGCCGATCCAACTTAGT+GGG | - | chr4_2:45894037-45894056 | Msa0602340:intron | 45.0% | |
| CGATCCAACTTAGTGGGATA+AGG | - | chr4_2:45894043-45894062 | Msa0602340:intron | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+TGG | + | chr4_2:45894050-45894069 | None:intergenic | 45.0% |
| CAACTTAGTGGGATAAGGCT+TGG | - | chr4_2:45894048-45894067 | Msa0602340:intron | 45.0% | |
| AATACACGTCCTCCAATCCA+TGG | + | chr4_2:45894107-45894126 | None:intergenic | 45.0% | |
| TGTGTTCTTGGAATGCCACT+TGG | - | chr4_2:45894720-45894739 | Msa0602340:CDS | 45.0% | |
| TTTACACCGCTAGATTCAGC+AGG | + | chr4_2:45895023-45895042 | None:intergenic | 45.0% | |
| GGTATTGCTTGTCTTGCATG+AGG | - | chr4_2:45895123-45895142 | Msa0602340:intron | 45.0% | |
| CATTCTTGCATCCCTCATGA+GGG | + | chr4_2:45895193-45895212 | None:intergenic | 45.0% | |
| TCATTCTTGCATCCCTCATG+AGG | + | chr4_2:45895194-45895213 | None:intergenic | 45.0% | |
| CTCCAAATTTCGTTGCTGCA+TGG | + | chr4_2:45895267-45895286 | None:intergenic | 45.0% | |
| CATGCAGCAACGAAATTTGG+AGG | - | chr4_2:45895265-45895284 | Msa0602340:intron | 45.0% | |
| ! | GACATCAATGCAGAGCATCT+TGG | + | chr4_2:45895329-45895348 | None:intergenic | 45.0% |
| ! | TCTTTTCTGTTTCGGCTGCA+AGG | - | chr4_2:45895430-45895449 | Msa0602340:intron | 45.0% |
| CATGTCATACCACTATGCCA+CGG | + | chr4_2:45895458-45895477 | None:intergenic | 45.0% | |
| AGTTGAAGTCTCTGGCATCA+AGG | - | chr4_2:45895525-45895544 | Msa0602340:intron | 45.0% | |
| ! | TAGAGTACCTGCATGTCATG+TGG | + | chr4_2:45895610-45895629 | None:intergenic | 45.0% |
| TAGAAAACATGAGGCTTCCC+TGG | + | chr4_2:45895846-45895865 | None:intergenic | 45.0% | |
| GGGGCAAAATTGATCGTCAT+TGG | + | chr4_2:45896248-45896267 | None:intergenic | 45.0% | |
| ! | TGACGATCAATTTTGCCCCT+TGG | - | chr4_2:45896249-45896268 | Msa0602340:intron | 45.0% |
| !! | TATTAGGTCAAGGAGTACCG+TGG | - | chr4_2:45896433-45896452 | Msa0602340:intron | 45.0% |
| ! | GTACCGTGGCCTTTTACTTT+TGG | - | chr4_2:45896447-45896466 | Msa0602340:intron | 45.0% |
| CCACCAAAAGTAAAAGGCCA+CGG | + | chr4_2:45896453-45896472 | None:intergenic | 45.0% | |
| !! | CGTGGCCTTTTACTTTTGGT+GGG | - | chr4_2:45896451-45896470 | Msa0602340:intron | 45.0% |
| TTCAGTGGCAAAATCTACGG+TGG | + | chr4_2:45896540-45896559 | None:intergenic | 45.0% | |
| ! | CTGGACCGATTTCTTTGAAG+GGG | + | chr4_2:45896609-45896628 | None:intergenic | 45.0% |
| ! | GCTGGACCGATTTCTTTGAA+GGG | + | chr4_2:45896610-45896629 | None:intergenic | 45.0% |
| ! | AGCTGGACCGATTTCTTTGA+AGG | + | chr4_2:45896611-45896630 | None:intergenic | 45.0% |
| ! | AGTATAAACAGTAGCGGAGC+TGG | + | chr4_2:45896628-45896647 | None:intergenic | 45.0% |
| GCTATAAATGTGGAGCTGAG+TGG | - | chr4_2:45896964-45896983 | Msa0602340:CDS | 45.0% | |
| ATAAATGTGGAGCTGAGTGG+AGG | - | chr4_2:45896967-45896986 | Msa0602340:CDS | 45.0% | |
| TAAATGTGGAGCTGAGTGGA+GGG | - | chr4_2:45896968-45896987 | Msa0602340:CDS | 45.0% | |
| ! | TTCTTGTCCACTTTGGGAAG+AGG | - | chr4_2:45897007-45897026 | Msa0602340:CDS | 45.0% |
| GTTCTGATGAAGAGGACTAC+AGG | - | chr4_2:45897075-45897094 | Msa0602340:CDS | 45.0% | |
| !! | CAACTTGACTAGCTTGACCT+AGG | - | chr4_2:45897129-45897148 | Msa0602340:CDS | 45.0% |
| !! | TGACTAGCTTGACCTAGGTT+TGG | - | chr4_2:45897134-45897153 | Msa0602340:CDS | 45.0% |
| !!! | TTTTATTTTTATTTTTACAA+TGG | - | chr4_2:45897173-45897192 | Msa0602340:CDS | 5.0% |
| GGATGGGTCTTCGAGAAAGA+CGG | + | chr4_2:45892702-45892721 | None:intergenic | 50.0% | |
| AAACGGAGTCGGAGATGGAT+GGG | + | chr4_2:45892718-45892737 | None:intergenic | 50.0% | |
| AAAACGGAGTCGGAGATGGA+TGG | + | chr4_2:45892719-45892738 | None:intergenic | 50.0% | |
| GTTGAAAACGGAGTCGGAGA+TGG | + | chr4_2:45892723-45892742 | None:intergenic | 50.0% | |
| TGGCAATCGAGATGAACGAC+AGG | - | chr4_2:45892777-45892796 | Msa0602340:CDS | 50.0% | |
| AGAAGGACGATCTCAACCGT+CGG | - | chr4_2:45892828-45892847 | Msa0602340:intron | 50.0% | |
| ! | CGAGATTTTCAACATGCCGG+TGG | - | chr4_2:45892874-45892893 | Msa0602340:intron | 50.0% |
| ! | GATTTTCAACATGCCGGTGG+AGG | - | chr4_2:45892877-45892896 | Msa0602340:intron | 50.0% |
| CATTCATCCCAATCCTCCAC+CGG | + | chr4_2:45892893-45892912 | None:intergenic | 50.0% | |
| GGTGGAGGATTGGGATGAAT+GGG | - | chr4_2:45892892-45892911 | Msa0602340:intron | 50.0% | |
| GTGGAGGATTGGGATGAATG+GGG | - | chr4_2:45892893-45892912 | Msa0602340:intron | 50.0% | |
| TGGAGGATTGGGATGAATGG+GGG | - | chr4_2:45892894-45892913 | Msa0602340:intron | 50.0% | |
| !! | GGTGAGAGTGTTTCTTTGGC+TGG | - | chr4_2:45893034-45893053 | Msa0602340:intron | 50.0% |
| CTGGGTGGTTGAAATGGAAG+AGG | - | chr4_2:45893559-45893578 | Msa0602340:intron | 50.0% | |
| TAGAGATGAGGATGTTGCGC+TGG | - | chr4_2:45893722-45893741 | Msa0602340:intron | 50.0% | |
| TTACTGCAGTCCAAGGCTTG+TGG | - | chr4_2:45894932-45894951 | Msa0602340:intron | 50.0% | |
| ATGAGGCCTGCTGAATCTAG+CGG | - | chr4_2:45895014-45895033 | Msa0602340:intron | 50.0% | |
| !! | CAGTTGATGGCTGTCAACAC+AGG | - | chr4_2:45895102-45895121 | Msa0602340:intron | 50.0% |
| GTCTTGCATGAGGCAACATG+TGG | - | chr4_2:45895133-45895152 | Msa0602340:intron | 50.0% | |
| TTGCATGAGGCAACATGTGG+AGG | - | chr4_2:45895136-45895155 | Msa0602340:intron | 50.0% | |
| GGTGAAGTTGCTCCATGGAA+TGG | - | chr4_2:45895157-45895176 | Msa0602340:intron | 50.0% | |
| CTCTGGCATCAAGGAGTCTT+TGG | - | chr4_2:45895534-45895553 | Msa0602340:intron | 50.0% | |
| TGGCATCAAGGAGTCTTTGG+AGG | - | chr4_2:45895537-45895556 | Msa0602340:intron | 50.0% | |
| GTTGCTACCACATGACATGC+AGG | - | chr4_2:45895600-45895619 | Msa0602340:intron | 50.0% | |
| TCTTATAAACAGGGGGAGCC+AGG | - | chr4_2:45895825-45895844 | Msa0602340:intron | 50.0% | |
| CTTATAAACAGGGGGAGCCA+GGG | - | chr4_2:45895826-45895845 | Msa0602340:intron | 50.0% | |
| GATCGCTCTCTGTGAGTTTG+TGG | + | chr4_2:45895944-45895963 | None:intergenic | 50.0% | |
| AACTCACAGAGAGCGATCCT+TGG | - | chr4_2:45895946-45895965 | Msa0602340:intron | 50.0% | |
| TGCAAGTCAGGTCATGCGAT+TGG | - | chr4_2:45895982-45896001 | Msa0602340:intron | 50.0% | |
| !! | CCGTGGCCTTTTACTTTTGG+TGG | - | chr4_2:45896450-45896469 | Msa0602340:intron | 50.0% |
| TTCTGGCCCACCTATTGAAG+TGG | - | chr4_2:45896513-45896532 | Msa0602340:intron | 50.0% | |
| GGTGGACCACTTCAATAGGT+GGG | + | chr4_2:45896522-45896541 | None:intergenic | 50.0% | |
| CTACGGTGGACCACTTCAAT+AGG | + | chr4_2:45896526-45896545 | None:intergenic | 50.0% | |
| GGACTACCGTTCTGATGAAG+AGG | - | chr4_2:45897067-45897086 | Msa0602340:CDS | 50.0% | |
| ! | AGGTTGGTCGATGAGGGAAG+CGG | + | chr4_2:45892660-45892679 | None:intergenic | 55.0% |
| ! | GGAGGAAGGTTGGTCGATGA+GGG | + | chr4_2:45892666-45892685 | None:intergenic | 55.0% |
| ! | AGGAGGAAGGTTGGTCGATG+AGG | + | chr4_2:45892667-45892686 | None:intergenic | 55.0% |
| TGGGTCTTCGAGAAAGACGG+CGG | + | chr4_2:45892699-45892718 | None:intergenic | 55.0% | |
| TCAACATGCCGGTGGAGGAT+TGG | - | chr4_2:45892882-45892901 | Msa0602340:intron | 55.0% | |
| CAACATGCCGGTGGAGGATT+GGG | - | chr4_2:45892883-45892902 | Msa0602340:intron | 55.0% | |
| CGGTGGAGGATTGGGATGAA+TGG | - | chr4_2:45892891-45892910 | Msa0602340:intron | 55.0% | |
| GGAGGATTGGGATGAATGGG+GGG | - | chr4_2:45892895-45892914 | Msa0602340:intron | 55.0% | |
| GACGACGTCCCTTCACCAAA+CGG | + | chr4_2:45892935-45892954 | None:intergenic | 55.0% | |
| ! | GTTTGGTGAAGGGACGTCGT+CGG | - | chr4_2:45892934-45892953 | Msa0602340:intron | 55.0% |
| TTTGGTGAAGGGACGTCGTC+GGG | - | chr4_2:45892935-45892954 | Msa0602340:intron | 55.0% | |
| GTGAGTGAGGAGGTTGTGAG+AGG | - | chr4_2:45893013-45893032 | Msa0602340:intron | 55.0% | |
| CGCTGGATGAGTAGTGAGAC+TGG | - | chr4_2:45893739-45893758 | Msa0602340:intron | 55.0% | |
| ATGGGCTTCGAAACAGCCGA+AGG | - | chr4_2:45894863-45894882 | Msa0602340:CDS | 55.0% | |
| GCTAGATTCAGCAGGCCTCA+TGG | + | chr4_2:45895015-45895034 | None:intergenic | 55.0% | |
| GTGGAGGTGAAGTTGCTCCA+TGG | - | chr4_2:45895152-45895171 | Msa0602340:intron | 55.0% | |
| GGCATGTTGGCACCATTCCA+TGG | + | chr4_2:45895172-45895191 | None:intergenic | 55.0% | |
| GTGCCAACATGCCCTCATGA+GGG | - | chr4_2:45895179-45895198 | Msa0602340:intron | 55.0% | |
| ! | CATCCCTCATGAGGGCATGT+TGG | + | chr4_2:45895185-45895204 | None:intergenic | 55.0% |
| TGCAAGGTTCCGTGGCATAG+TGG | - | chr4_2:45895446-45895465 | Msa0602340:intron | 55.0% | |
| CCATTGAATACTGGGCACGG+TGG | + | chr4_2:45896111-45896130 | None:intergenic | 55.0% | |
| CCACCGTGCCCAGTATTCAA+TGG | - | chr4_2:45896108-45896127 | Msa0602340:intron | 55.0% | |
| CGGTGGACCACTTCAATAGG+TGG | + | chr4_2:45896523-45896542 | None:intergenic | 55.0% | |
| ATTCCGCCACCGTGAGTTCG+TGG | + | chr4_2:45892583-45892602 | None:intergenic | 60.0% | |
| !! | ACTCACGGTGGCGGAATCCA+TGG | - | chr4_2:45892586-45892605 | Msa0602340:three_prime_UTR | 60.0% |
| GTCGATGAGGGAAGCGGAGA+GGG | + | chr4_2:45892654-45892673 | None:intergenic | 60.0% | |
| TGGAGGAGGAGGAGGAAGGT+TGG | + | chr4_2:45892676-45892695 | None:intergenic | 60.0% | |
| TTCGAGAAAGACGGCGGTGG+AGG | + | chr4_2:45892693-45892712 | None:intergenic | 60.0% | |
| GTCTTCGAGAAAGACGGCGG+TGG | + | chr4_2:45892696-45892715 | None:intergenic | 60.0% | |
| TCGACGAGGCGGAACGATGA+AGG | - | chr4_2:45892959-45892978 | Msa0602340:intron | 60.0% | |
| ACTCGAAGCACGGACACCTC+TGG | + | chr4_2:45893401-45893420 | None:intergenic | 60.0% | |
| TCATGCCTCGCCACAAGCCT+TGG | + | chr4_2:45894945-45894964 | None:intergenic | 60.0% | |
| GGTGCCAACATGCCCTCATG+AGG | - | chr4_2:45895178-45895197 | Msa0602340:intron | 60.0% | |
| GTTTCGGCTGCAAGGTTCCG+TGG | - | chr4_2:45895438-45895457 | Msa0602340:intron | 60.0% | |
| GGCGCAACGCCACGAACTCA+CGG | - | chr4_2:45892571-45892590 | Msa0602340:three_prime_UTR | 65.0% | |
| GCAACGCCACGAACTCACGG+TGG | - | chr4_2:45892574-45892593 | Msa0602340:three_prime_UTR | 65.0% | |
| ACGCCACGAACTCACGGTGG+CGG | - | chr4_2:45892577-45892596 | Msa0602340:three_prime_UTR | 65.0% | |
| GGGAAGCGGAGAGGGCTTCT+TGG | + | chr4_2:45892646-45892665 | None:intergenic | 65.0% | |
| GGTCGATGAGGGAAGCGGAG+AGG | + | chr4_2:45892655-45892674 | None:intergenic | 65.0% | |
| AAAGACGGCGGTGGAGGAGG+AGG | + | chr4_2:45892687-45892706 | None:intergenic | 65.0% | |
| GAGAAAGACGGCGGTGGAGG+AGG | + | chr4_2:45892690-45892709 | None:intergenic | 65.0% | |
| !! | AGGAGGGGGCACTCGAAGCA+CGG | + | chr4_2:45893411-45893430 | None:intergenic | 65.0% |
| GCAGTCCAAGGCTTGTGGCG+AGG | - | chr4_2:45894937-45894956 | Msa0602340:intron | 65.0% | |
| GCGGTGGAGGAGGAGGAGGA+AGG | + | chr4_2:45892680-45892699 | None:intergenic | 70.0% | |
| GGACGTCGTCGGGTTCGACG+AGG | - | chr4_2:45892945-45892964 | Msa0602340:intron | 70.0% | |
| CGTCGTCGGGTTCGACGAGG+CGG | - | chr4_2:45892948-45892967 | Msa0602340:intron | 70.0% | |
| GACGGCGGTGGAGGAGGAGG+AGG | + | chr4_2:45892684-45892703 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 45892516 | 45897264 | 45892516 | ID=Msa0602340;Name=Msa0602340 |
| chr4_2 | mRNA | 45892516 | 45897264 | 45892516 | ID=Msa0602340-mRNA-1;Parent=Msa0602340;Name=Msa0602340-mRNA-1;_AED=0.02;_eAED=0.02;_QI=11|1|1|1|1|1|3|149|551 |
| chr4_2 | exon | 45892516 | 45892833 | 45892516 | ID=Msa0602340-mRNA-1:exon:10339;Parent=Msa0602340-mRNA-1 |
| chr4_2 | exon | 45894159 | 45894928 | 45894159 | ID=Msa0602340-mRNA-1:exon:10338;Parent=Msa0602340-mRNA-1 |
| chr4_2 | exon | 45896537 | 45897264 | 45896537 | ID=Msa0602340-mRNA-1:exon:10337;Parent=Msa0602340-mRNA-1 |
| chr4_2 | five_prime_UTR | 45897254 | 45897264 | 45897254 | ID=Msa0602340-mRNA-1:five_prime_utr;Parent=Msa0602340-mRNA-1 |
| chr4_2 | CDS | 45896537 | 45897253 | 45896537 | ID=Msa0602340-mRNA-1:cds;Parent=Msa0602340-mRNA-1 |
| chr4_2 | CDS | 45894159 | 45894928 | 45894159 | ID=Msa0602340-mRNA-1:cds;Parent=Msa0602340-mRNA-1 |
| chr4_2 | CDS | 45892665 | 45892833 | 45892665 | ID=Msa0602340-mRNA-1:cds;Parent=Msa0602340-mRNA-1 |
| chr4_2 | three_prime_UTR | 45892516 | 45892664 | 45892516 | ID=Msa0602340-mRNA-1:three_prime_utr;Parent=Msa0602340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
