Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574300 | RDY05933.1 | 49.708 | 342 | 61 | 6 | 1 | 236 | 1 | 337 | 6.43e-93 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574300 | A0A371HT28 | 49.708 | 342 | 61 | 6 | 1 | 236 | 1 | 337 | 3.07e-93 | 288 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025580 | Msa0574300 | 0.813864 | 2.062695e-51 | -8.615850e-47 |
| Msa0034210 | Msa0574300 | 0.814595 | 1.422494e-51 | -8.615850e-47 |
| Msa0050660 | Msa0574300 | 0.802629 | 5.122729e-49 | -8.615850e-47 |
| Msa0050700 | Msa0574300 | 0.801930 | 7.136992e-49 | -8.615850e-47 |
| Msa0050790 | Msa0574300 | 0.804602 | 1.996504e-49 | -8.615850e-47 |
| Msa0128310 | Msa0574300 | 0.824073 | 9.835593e-54 | -8.615850e-47 |
| Msa0136650 | Msa0574300 | 0.842061 | 3.253792e-58 | -8.615850e-47 |
| Msa0174440 | Msa0574300 | 0.816904 | 4.347326e-52 | -8.615850e-47 |
| Msa0174450 | Msa0574300 | 0.824538 | 7.645084e-54 | -8.615850e-47 |
| Msa0380620 | Msa0574300 | 0.835841 | 1.326446e-56 | -8.615850e-47 |
| Msa0426530 | Msa0574300 | 0.809551 | 1.789797e-50 | -8.615850e-47 |
| Msa0430260 | Msa0574300 | 0.838495 | 2.780459e-57 | -8.615850e-47 |
| Msa0472950 | Msa0574300 | 0.801125 | 1.043472e-48 | -8.615850e-47 |
| Msa0500380 | Msa0574300 | 0.813410 | 2.596117e-51 | -8.615850e-47 |
| Msa0517250 | Msa0574300 | 0.831061 | 2.066230e-55 | -8.615850e-47 |
| Msa0574300 | Msa0597270 | 0.800823 | 1.202711e-48 | -8.615850e-47 |
| Msa0574300 | Msa0700460 | 0.810757 | 9.835885e-51 | -8.615850e-47 |
| Msa0574300 | Msa0738700 | 0.807885 | 4.062039e-50 | -8.615850e-47 |
| Msa0574300 | Msa0741220 | 0.809708 | 1.655505e-50 | -8.615850e-47 |
| Msa0574300 | Msa0756490 | 0.809187 | 2.142098e-50 | -8.615850e-47 |
| Msa0574300 | Msa1042160 | 0.820144 | 8.011842e-53 | -8.615850e-47 |
| Msa0574300 | Msa1042190 | 0.820518 | 6.575327e-53 | -8.615850e-47 |
| Msa0574300 | Msa1044680 | 0.822642 | 2.124198e-53 | -8.615850e-47 |
| Msa0574300 | Msa1080000 | 0.801774 | 7.683050e-49 | -8.615850e-47 |
| Msa0574300 | Msa1081390 | 0.816443 | 5.514387e-52 | -8.615850e-47 |
| Msa0574300 | Msa1096960 | 0.803664 | 3.128981e-49 | -8.615850e-47 |
| Msa0574300 | Msa1105640 | 0.828941 | 6.795057e-55 | -8.615850e-47 |
| Msa0574300 | Msa1116220 | 0.820129 | 8.075780e-53 | -8.615850e-47 |
| Msa0574300 | Msa1167470 | 0.811424 | 7.050910e-51 | -8.615850e-47 |
| Msa0574300 | Msa1321340 | 0.804158 | 2.471024e-49 | -8.615850e-47 |
| Msa0574300 | Msa1393780 | 0.813925 | 1.999773e-51 | -8.615850e-47 |
| Msa0574300 | Msa1414170 | 0.804690 | 1.913661e-49 | -8.615850e-47 |
| Msa0574300 | Msa1440630 | 0.802700 | 4.954325e-49 | -8.615850e-47 |
| Msa0574300 | Msa1452140 | 0.816227 | 6.165159e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574300 | MtrunA17_Chr8g0390691 | 96.703 | 91 | 3 | 0 | 1 | 91 | 1 | 91 | 1.73e-57 | 188 |
| Msa0574300 | MtrunA17_Chr8g0390691 | 76.577 | 111 | 4 | 1 | 148 | 236 | 248 | 358 | 5.65e-50 | 168 |
| Msa0574300 | MtrunA17_Chr6g0485111 | 67.857 | 112 | 13 | 2 | 148 | 236 | 252 | 363 | 1.12e-43 | 152 |
| Msa0574300 | MtrunA17_Chr6g0485111 | 61.053 | 95 | 33 | 2 | 1 | 91 | 1 | 95 | 2.90e-27 | 108 |
| Msa0574300 | MtrunA17_Chr1g0169271 | 51.351 | 111 | 32 | 1 | 148 | 236 | 266 | 376 | 1.58e-30 | 117 |
| Msa0574300 | MtrunA17_Chr1g0169271 | 54.237 | 59 | 26 | 1 | 34 | 91 | 51 | 109 | 2.05e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574300 | AT4G13345.2 | 65.766 | 111 | 16 | 1 | 148 | 236 | 247 | 357 | 7.53e-43 | 150 |
| Msa0574300 | AT4G13345.2 | 66.667 | 93 | 26 | 2 | 1 | 91 | 1 | 90 | 1.08e-25 | 104 |
| Msa0574300 | AT4G13345.6 | 65.766 | 111 | 16 | 1 | 148 | 236 | 247 | 357 | 7.53e-43 | 150 |
| Msa0574300 | AT4G13345.6 | 66.667 | 93 | 26 | 2 | 1 | 91 | 1 | 90 | 1.08e-25 | 104 |
| Msa0574300 | AT4G13345.5 | 66.667 | 108 | 14 | 1 | 148 | 233 | 247 | 354 | 3.61e-42 | 147 |
| Msa0574300 | AT4G13345.5 | 66.667 | 93 | 26 | 2 | 1 | 91 | 1 | 90 | 6.53e-26 | 104 |
| Msa0574300 | AT4G13345.1 | 63.964 | 111 | 18 | 1 | 148 | 236 | 247 | 357 | 1.89e-41 | 146 |
| Msa0574300 | AT4G13345.1 | 66.667 | 93 | 26 | 2 | 1 | 91 | 1 | 90 | 1.02e-25 | 104 |
| Msa0574300 | AT4G13345.4 | 63.964 | 111 | 18 | 1 | 148 | 236 | 247 | 357 | 2.04e-41 | 146 |
| Msa0574300 | AT4G13345.4 | 66.667 | 93 | 26 | 2 | 1 | 91 | 1 | 90 | 7.70e-26 | 104 |
| Msa0574300 | AT3G24460.2 | 62.609 | 115 | 17 | 2 | 148 | 236 | 254 | 368 | 4.91e-41 | 145 |
| Msa0574300 | AT3G24460.2 | 63.265 | 98 | 28 | 2 | 1 | 91 | 1 | 97 | 1.21e-33 | 126 |
| Msa0574300 | AT3G24460.1 | 62.609 | 115 | 17 | 2 | 148 | 236 | 254 | 368 | 4.91e-41 | 145 |
| Msa0574300 | AT3G24460.1 | 63.265 | 98 | 28 | 2 | 1 | 91 | 1 | 97 | 1.21e-33 | 126 |
| Msa0574300 | AT2G33205.1 | 52.727 | 110 | 31 | 1 | 148 | 236 | 265 | 374 | 2.94e-30 | 117 |
| Msa0574300 | AT2G33205.7 | 51.786 | 112 | 31 | 2 | 148 | 236 | 155 | 266 | 1.97e-29 | 113 |
| Msa0574300 | AT2G33205.2 | 51.786 | 112 | 31 | 2 | 148 | 236 | 170 | 281 | 2.33e-29 | 113 |
| Msa0574300 | AT2G33205.9 | 51.786 | 112 | 31 | 2 | 148 | 236 | 265 | 376 | 1.06e-28 | 112 |
| Msa0574300 | AT2G33205.8 | 51.786 | 112 | 31 | 2 | 148 | 236 | 265 | 376 | 1.47e-28 | 112 |
| Msa0574300 | AT2G33205.5 | 51.786 | 112 | 31 | 2 | 148 | 236 | 265 | 376 | 1.47e-28 | 112 |
| Msa0574300 | AT2G33205.6 | 52.294 | 109 | 29 | 2 | 148 | 233 | 265 | 373 | 5.72e-28 | 110 |
| Msa0574300 | AT4G13345.3 | 66.667 | 93 | 26 | 2 | 1 | 91 | 1 | 90 | 3.57e-26 | 103 |
| Msa0574300 | AT4G13345.7 | 66.667 | 93 | 26 | 2 | 1 | 91 | 1 | 90 | 3.57e-26 | 103 |
Find 97 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATATGTACATCTGAAATT+TGG | 0.169988 | 4_1:-77759577 | None:intergenic |
| AAACGCTTTGTTTGTGCTTT+CGG | 0.261674 | 4_1:-77752905 | None:intergenic |
| ATTCAACCTACAGGATTAAA+AGG | 0.275412 | 4_1:+77755955 | Msa0574300:intron |
| TTTATATTGTCTTCCTTTGT+TGG | 0.276198 | 4_1:+77757517 | Msa0574300:CDS |
| TATATGTACATCTGAAATTT+GGG | 0.280752 | 4_1:-77759576 | None:intergenic |
| CTGGACAGAATCAATGTTTC+TGG | 0.284057 | 4_1:+77759693 | Msa0574300:three_prime_UTR |
| TGCACGCATACTGGTTGAAT+TGG | 0.334492 | 4_1:+77759722 | Msa0574300:three_prime_UTR |
| CAATGGTGGAAAAGACTGTT+TGG | 0.350902 | 4_1:+77755981 | Msa0574300:CDS |
| TCCAAGGATTGGATGCATTT+CGG | 0.359677 | 4_1:-77755641 | None:intergenic |
| CAAACAACATCACATGAATA+TGG | 0.364727 | 4_1:-77757215 | None:intergenic |
| TTTCTGTGTTGAAGAAGATA+TGG | 0.365734 | 4_1:+77755548 | Msa0574300:exon |
| ATGTGGGGTGGACCAGCACC+TGG | 0.368671 | 4_1:+77758785 | Msa0574300:CDS |
| GACCGCATATGTCGTCTGTT+TGG | 0.370819 | 4_1:+77757242 | Msa0574300:CDS |
| TCATATCCAATGATTCTTCA+TGG | 0.371838 | 4_1:+77755607 | Msa0574300:CDS |
| CATAGATTCCAAATGCTTCC+AGG | 0.376091 | 4_1:+77758132 | Msa0574300:CDS |
| TGCTGATAGCTCCAATGATA+TGG | 0.380094 | 4_1:+77759463 | Msa0574300:three_prime_UTR |
| GTTGAAGAAGATATGGAAAC+TGG | 0.390734 | 4_1:+77755555 | Msa0574300:exon |
| TATGCTAACCTGGAAGCATT+TGG | 0.394190 | 4_1:-77758140 | None:intergenic |
| GATGATGTACCATATGGTTA+TGG | 0.398590 | 4_1:+77758255 | Msa0574300:CDS |
| TGCTGGCTAATCTGTTGGCA+TGG | 0.404877 | 4_1:+77755694 | Msa0574300:CDS |
| GGAAACAGAGAGAAATTGTT+GGG | 0.407075 | 4_1:-77752929 | None:intergenic |
| GCATGGGCTGCTCGTGACTA+TGG | 0.408101 | 4_1:+77755711 | Msa0574300:CDS |
| TGTCTGCACTTCCATATCAT+TGG | 0.413613 | 4_1:-77759474 | None:intergenic |
| ATTCTAACTCCAGGGCTGAT+GGG | 0.414558 | 4_1:+77757492 | Msa0574300:intron |
| CTGCTGGTGTATCATCCTTC+CGG | 0.415225 | 4_1:-77758230 | None:intergenic |
| TCGTAGTGCTTTAACAGAAA+TGG | 0.420048 | 4_1:+77755734 | Msa0574300:CDS |
| TGGCACAAATGCACGCATAC+TGG | 0.421483 | 4_1:+77759713 | Msa0574300:three_prime_UTR |
| TCATCTTCTTCGTCTTTCTC+AGG | 0.423423 | 4_1:+77753065 | Msa0574300:five_prime_UTR |
| TACTATTCTGACCCAGGTGC+TGG | 0.425466 | 4_1:-77758797 | None:intergenic |
| AATGGTGGAAAAGACTGTTT+GGG | 0.428647 | 4_1:+77755982 | Msa0574300:CDS |
| TATTCTAACTCCAGGGCTGA+TGG | 0.432842 | 4_1:+77757491 | Msa0574300:intron |
| TTGGCAAACCTGCCTTCTAA+TGG | 0.434037 | 4_1:-77757544 | None:intergenic |
| TCCGAAATGCATCCAATCCT+TGG | 0.436210 | 4_1:+77755640 | Msa0574300:CDS |
| ACTGAACCATGAAGAATCAT+TGG | 0.442403 | 4_1:-77755613 | None:intergenic |
| TTTGTTGGTGCGCCATTAGA+AGG | 0.456775 | 4_1:+77757532 | Msa0574300:CDS |
| GTGACACATGTACAGGTAAG+AGG | 0.462256 | 4_1:-77759814 | None:intergenic |
| AATTTCAGATGTACATATAG+TGG | 0.464809 | 4_1:+77759580 | Msa0574300:three_prime_UTR |
| ACAGTCCTTTCACTTTATGA+AGG | 0.472907 | 4_1:+77759772 | Msa0574300:three_prime_UTR |
| TTCTAACTCCAGGGCTGATG+GGG | 0.479038 | 4_1:+77757493 | Msa0574300:intron |
| GCATATGTCGTCTGTTTGGT+GGG | 0.483780 | 4_1:+77757246 | Msa0574300:CDS |
| CGCATATGTCGTCTGTTTGG+TGG | 0.485949 | 4_1:+77757245 | Msa0574300:CDS |
| ACTCCTCCAGCTCTGAAGAT+AGG | 0.488452 | 4_1:+77759603 | Msa0574300:three_prime_UTR |
| GATTGTTCTTTAGTGTGCAC+TGG | 0.494008 | 4_1:+77759674 | Msa0574300:three_prime_UTR |
| TTGGTGCGCCATTAGAAGGC+AGG | 0.495067 | 4_1:+77757536 | Msa0574300:CDS |
| CAGTCCTTTCACTTTATGAA+GGG | 0.503149 | 4_1:+77759773 | Msa0574300:three_prime_UTR |
| GCTGGCTAATCTGTTGGCAT+GGG | 0.507922 | 4_1:+77755695 | Msa0574300:CDS |
| CAGAATAGTAAATGAATGGC+TGG | 0.508449 | 4_1:+77758810 | Msa0574300:exon |
| TTGCTATGCTATTGGTTGGA+TGG | 0.512496 | 4_1:+77758316 | Msa0574300:CDS |
| CGAGTGAACACTGGAGCGGC+TGG | 0.514328 | 4_1:-77753010 | None:intergenic |
| TTGAGAAGGCAAGAAGGCTC+TGG | 0.515041 | 4_1:-77757297 | None:intergenic |
| TTCTAATGGCGCACCAACAA+AGG | 0.520794 | 4_1:-77757530 | None:intergenic |
| TGGAAACAGAGAGAAATTGT+TGG | 0.521277 | 4_1:-77752930 | None:intergenic |
| TTTCCTATCTTCAGAGCTGG+AGG | 0.523292 | 4_1:-77759606 | None:intergenic |
| ACAAAATTTCATAACTAGCA+TGG | 0.526664 | 4_1:-77759529 | None:intergenic |
| GCAGAGGATGATGTACCATA+TGG | 0.526809 | 4_1:+77758249 | Msa0574300:CDS |
| GGGTCAGAATAGTAAATGAA+TGG | 0.544936 | 4_1:+77758806 | Msa0574300:exon |
| CTACGCAGTACATGAATGAA+TGG | 0.545736 | 4_1:-77755523 | None:intergenic |
| ATATCTTGCCATCCAAGGAT+TGG | 0.547635 | 4_1:-77755652 | None:intergenic |
| TTCATTTACTATTCTGACCC+AGG | 0.547987 | 4_1:-77758803 | None:intergenic |
| TAATCCCTTCATAAAGTGAA+AGG | 0.551009 | 4_1:-77759777 | None:intergenic |
| GAGACACGCTGGTCATGAGT+TGG | 0.556515 | 4_1:-77757353 | None:intergenic |
| TATGGTACATCATCCTCTGC+TGG | 0.564240 | 4_1:-77758246 | None:intergenic |
| ATCTATTAACGAGTGAACAC+TGG | 0.570516 | 4_1:-77753019 | None:intergenic |
| TGGGACAAATACAGGAGAGT+AGG | 0.571489 | 4_1:-77758371 | None:intergenic |
| GAGAAAGACGAAGAAGATGA+AGG | 0.572170 | 4_1:-77753062 | None:intergenic |
| TTTCTCAGTGACACATGTAC+AGG | 0.572489 | 4_1:-77759821 | None:intergenic |
| TAAGCATATCTTGCCATCCA+AGG | 0.572921 | 4_1:-77755657 | None:intergenic |
| TAATGAAGAAAATGTTGAGA+AGG | 0.573025 | 4_1:-77757311 | None:intergenic |
| GAAGAAGATGAAGGCAATGG+TGG | 0.578051 | 4_1:-77753053 | None:intergenic |
| AAATGCATCCAATCCTTGGA+TGG | 0.580170 | 4_1:+77755644 | Msa0574300:CDS |
| ATATGGAAGTGCAGACAAGT+TGG | 0.587366 | 4_1:+77759480 | Msa0574300:three_prime_UTR |
| TGCAGATGGACAATTGATGT+GGG | 0.592361 | 4_1:+77758769 | Msa0574300:intron |
| CACATCCCTGCAGTTCCGGA+AGG | 0.596874 | 4_1:+77758215 | Msa0574300:intron |
| AGCAAAATACATTGCTCCCG+TGG | 0.597392 | 4_1:-77758298 | None:intergenic |
| CTGCAGATGGACAATTGATG+TGG | 0.599876 | 4_1:+77758768 | Msa0574300:intron |
| TGTGGGGTGGACCAGCACCT+GGG | 0.602163 | 4_1:+77758786 | Msa0574300:CDS |
| GGATTAAAAGGATGCAATGG+TGG | 0.606728 | 4_1:+77755967 | Msa0574300:intron |
| TTGAAGAAGATATGGAAACT+GGG | 0.607550 | 4_1:+77755556 | Msa0574300:exon |
| AAAATGTTGAGAAGGCAAGA+AGG | 0.607677 | 4_1:-77757303 | None:intergenic |
| CATATGTCGTCTGTTTGGTG+GGG | 0.610341 | 4_1:+77757247 | Msa0574300:CDS |
| GAAACTGGGGAAAGCAACAA+TGG | 0.619670 | 4_1:+77755570 | Msa0574300:CDS |
| ACAGGATTAAAAGGATGCAA+TGG | 0.633035 | 4_1:+77755964 | Msa0574300:intron |
| TGACACATGTACAGGTAAGA+GGG | 0.634087 | 4_1:-77759813 | None:intergenic |
| GACGAAGAAGATGAAGGCAA+TGG | 0.635154 | 4_1:-77753056 | None:intergenic |
| TTTCGGGTGCAGAGACACGC+TGG | 0.640882 | 4_1:-77757364 | None:intergenic |
| GATGGACAATTGATGTGGGG+TGG | 0.645928 | 4_1:+77758773 | Msa0574300:intron |
| TGAAGAAGATATGGAAACTG+GGG | 0.648363 | 4_1:+77755557 | Msa0574300:exon |
| ATATGTACATCTGAAATTTG+GGG | 0.654778 | 4_1:-77759575 | None:intergenic |
| GAAGGATGATACACCAGCAG+AGG | 0.655362 | 4_1:+77758233 | Msa0574300:CDS |
| GAAACAGAGAGAAATTGTTG+GGG | 0.664760 | 4_1:-77752928 | None:intergenic |
| AAAGCAACAATGGTAATGAG+AGG | 0.674245 | 4_1:+77755580 | Msa0574300:CDS |
| TTAACGAGTGAACACTGGAG+CGG | 0.677562 | 4_1:-77753014 | None:intergenic |
| AAGGACTGTATATCTTCATG+CGG | 0.679521 | 4_1:-77759758 | None:intergenic |
| CACCAAACAGACGACATATG+CGG | 0.707786 | 4_1:-77757244 | None:intergenic |
| GCAGATGGACAATTGATGTG+GGG | 0.727203 | 4_1:+77758770 | Msa0574300:intron |
| TGGTGGAAAAGACTGTTTGG+GGG | 0.727512 | 4_1:+77755984 | Msa0574300:CDS |
| ATGGTGGAAAAGACTGTTTG+GGG | 0.733016 | 4_1:+77755983 | Msa0574300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAATAATATATATTGAT+CGG | - | chr4_1:77754306-77754325 | None:intergenic | 10.0% |
| !!! | AATTTATTTAGGATAATATA+AGG | + | chr4_1:77757140-77757159 | Msa0574300:intron | 10.0% |
| !! | AAAAATAATAAGATAGATAA+AGG | - | chr4_1:77757949-77757968 | None:intergenic | 10.0% |
| !!! | TTTATCTATCTTATTATTTT+TGG | + | chr4_1:77757948-77757967 | Msa0574300:intron | 10.0% |
| !! | ATCGATAATTAAAAAAATAA+TGG | - | chr4_1:77758872-77758891 | None:intergenic | 10.0% |
| !! | AGAGTATAAAAAATGAAAAA+TGG | - | chr4_1:77752953-77752972 | None:intergenic | 15.0% |
| !!! | ATGTTTTTTTCACATTTTTT+TGG | + | chr4_1:77753250-77753269 | Msa0574300:intron | 15.0% |
| !!! | TTATTCTTTTCTAATTTTCT+CGG | - | chr4_1:77753396-77753415 | None:intergenic | 15.0% |
| !! | GAAAATTAGAAAAGAATAAA+AGG | + | chr4_1:77753397-77753416 | Msa0574300:intron | 15.0% |
| !!! | CTCTTTTTTCAAATAATATA+CGG | - | chr4_1:77754338-77754357 | None:intergenic | 15.0% |
| !!! | TATTTAGAGTAATATGAATT+AGG | + | chr4_1:77754441-77754460 | Msa0574300:intron | 15.0% |
| !!! | CTTATAATCTTATTTATTTG+TGG | + | chr4_1:77754814-77754833 | Msa0574300:intron | 15.0% |
| !! | TAGTTATTCATATTCATTTA+TGG | + | chr4_1:77756126-77756145 | Msa0574300:intron | 15.0% |
| !! | TTTATATAATATAAGCACAA+TGG | - | chr4_1:77756889-77756908 | None:intergenic | 15.0% |
| !! | TGTGCTTATATTATATAAAA+AGG | + | chr4_1:77756890-77756909 | Msa0574300:intron | 15.0% |
| !!! | AAAATGTTTTAAACAAGTAA+AGG | - | chr4_1:77757412-77757431 | None:intergenic | 15.0% |
| !!! | TTAGCTTGAATTTTATTATT+AGG | + | chr4_1:77758173-77758192 | Msa0574300:intron | 15.0% |
| !!! | TTTCAATAAAAATGTTTTTG+TGG | - | chr4_1:77758640-77758659 | None:intergenic | 15.0% |
| !! | GATAATTAAAAAAATAATGG+AGG | - | chr4_1:77758869-77758888 | None:intergenic | 15.0% |
| !! | TAATTTAAATCTTTGTCAAA+GGG | - | chr4_1:77759188-77759207 | None:intergenic | 15.0% |
| !! | ATAATTTAAATCTTTGTCAA+AGG | - | chr4_1:77759189-77759208 | None:intergenic | 15.0% |
| !!! | AAATTGTTTTAAGAGTAAAA+AGG | - | chr4_1:77759427-77759446 | None:intergenic | 15.0% |
| !! | AAAATTAAAAGAGGAATGAA+AGG | - | chr4_1:77753169-77753188 | None:intergenic | 20.0% |
| !! | AAGTTTAAATATAGAAAGGA+GGG | - | chr4_1:77753755-77753774 | None:intergenic | 20.0% |
| !! | TAAGTTTAAATATAGAAAGG+AGG | - | chr4_1:77753756-77753775 | None:intergenic | 20.0% |
| !! | GAGTAAGTTTAAATATAGAA+AGG | - | chr4_1:77753759-77753778 | None:intergenic | 20.0% |
| !! | ATACACAAAATATTATTGAG+AGG | - | chr4_1:77753853-77753872 | None:intergenic | 20.0% |
| !! | AATTAATTGCAAAAGTAACT+CGG | + | chr4_1:77753952-77753971 | Msa0574300:intron | 20.0% |
| !! | ATTTACCATTGAAAATCATT+GGG | - | chr4_1:77754020-77754039 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTACAAGCAAAA+AGG | - | chr4_1:77754075-77754094 | None:intergenic | 20.0% |
| !!! | ACTCTTATTTTTATCTTCTA+TGG | + | chr4_1:77754135-77754154 | Msa0574300:intron | 20.0% |
| !! | TTATGAAATATTTGCTTTAG+CGG | - | chr4_1:77754629-77754648 | None:intergenic | 20.0% |
| !!! | CTTTTATTTATTTTCCACAA+TGG | - | chr4_1:77754794-77754813 | None:intergenic | 20.0% |
| !!! | AGAATCTTTCAAAAAAGTAT+TGG | + | chr4_1:77755106-77755125 | Msa0574300:intron | 20.0% |
| !! | ACTGAAAAACAATCAAAAAA+TGG | + | chr4_1:77755247-77755266 | Msa0574300:intron | 20.0% |
| !!! | TTAGATTTGATTTAAACCAA+TGG | - | chr4_1:77755929-77755948 | None:intergenic | 20.0% |
| !! | TAATAATAAATTCAACCTAC+AGG | + | chr4_1:77755946-77755965 | Msa0574300:intron | 20.0% |
| !! | TTTCATGTATATAACTGAAA+AGG | - | chr4_1:77756049-77756068 | None:intergenic | 20.0% |
| !!! | AGTACTTTTGACAATAAATT+TGG | - | chr4_1:77756941-77756960 | None:intergenic | 20.0% |
| !!! | ACAAGTTGATCAATTTATTT+AGG | + | chr4_1:77757129-77757148 | Msa0574300:intron | 20.0% |
| !! | TAAAAAATGGAAATTAAGAG+AGG | - | chr4_1:77757615-77757634 | None:intergenic | 20.0% |
| !!! | AACATTAGGCTATAATTTTT+GGG | - | chr4_1:77757908-77757927 | None:intergenic | 20.0% |
| !!! | AAACATTAGGCTATAATTTT+TGG | - | chr4_1:77757909-77757928 | None:intergenic | 20.0% |
| !!! | AATACATTTCTTTTCATTGT+TGG | + | chr4_1:77758029-77758048 | Msa0574300:intron | 20.0% |
| !!! | CGATTTAAAAGAATGTTTTT+TGG | + | chr4_1:77758888-77758907 | Msa0574300:intron | 20.0% |
| !!! | ATTGCTTTATTTAAGCAATT+TGG | - | chr4_1:77759312-77759331 | None:intergenic | 20.0% |
| !!! | TTTTATTAACTCAGATAAAC+AGG | + | chr4_1:77759385-77759404 | Msa0574300:intron | 20.0% |
| !! | TTTATTAACTCAGATAAACA+GGG | + | chr4_1:77759386-77759405 | Msa0574300:intron | 20.0% |
| !!! | AACAATTTTTGTTGATAGTA+TGG | + | chr4_1:77759439-77759458 | Msa0574300:intron | 20.0% |
| !!! | TATATGTACATCTGAAATTT+GGG | - | chr4_1:77759579-77759598 | None:intergenic | 20.0% |
| !! | GAATGAAAGGCATATAAAAA+TGG | - | chr4_1:77753156-77753175 | None:intergenic | 25.0% |
| ! | CAAATGTGGAAAATTAAAAG+AGG | - | chr4_1:77753178-77753197 | None:intergenic | 25.0% |
| ! | GAACAAATTATAGACAAATG+TGG | - | chr4_1:77753192-77753211 | None:intergenic | 25.0% |
| ! | AATAAAAGGAAAAGTTGAGA+TGG | + | chr4_1:77753411-77753430 | Msa0574300:intron | 25.0% |
| ! | ATTATCATATGCTTTAATCG+AGG | + | chr4_1:77753645-77753664 | Msa0574300:intron | 25.0% |
| ! | AAATAGAATTGTGATTGCAT+CGG | - | chr4_1:77753689-77753708 | None:intergenic | 25.0% |
| !! | TGTATAATGAGTTTTCCTAT+CGG | + | chr4_1:77753868-77753887 | Msa0574300:intron | 25.0% |
| ! | CATTTACCATTGAAAATCAT+TGG | - | chr4_1:77754021-77754040 | None:intergenic | 25.0% |
| ! | GGCAGAATTATAGTATTAAA+AGG | + | chr4_1:77754156-77754175 | Msa0574300:intron | 25.0% |
| ! | TTAGAATTTCACAATAAACG+AGG | + | chr4_1:77754263-77754282 | Msa0574300:intron | 25.0% |
| !!! | ATATAGTTTACTTTTGCCAA+AGG | + | chr4_1:77754411-77754430 | Msa0574300:intron | 25.0% |
| ! | CTCTAAATATAAGTTTCCTT+TGG | - | chr4_1:77754430-77754449 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTAGCTTCTCTTA+AGG | - | chr4_1:77754560-77754579 | None:intergenic | 25.0% |
| ! | TGCAATATATATGAAAGGTA+CGG | + | chr4_1:77754925-77754944 | Msa0574300:intron | 25.0% |
| ! | GTTACATATACTATTGATGA+TGG | - | chr4_1:77754968-77754987 | None:intergenic | 25.0% |
| ! | GTTACATATACTATTGATGA+TGG | - | chr4_1:77754968-77754987 | None:intergenic | 25.0% |
| ! | ATCTTAGTATTGCATAGTAT+TGG | + | chr4_1:77755082-77755101 | Msa0574300:intron | 25.0% |
| ! | CAATGAAAGCAACAATATAT+TGG | - | chr4_1:77755878-77755897 | None:intergenic | 25.0% |
| !!! | ATATATTGTTGCTTTCATTG+AGG | + | chr4_1:77755878-77755897 | Msa0574300:intron | 25.0% |
| ! | TACATGAAATTAGTCACTAA+AGG | + | chr4_1:77756060-77756079 | Msa0574300:intron | 25.0% |
| !!! | ATAATGTTTTTGTCAACTAC+TGG | + | chr4_1:77756241-77756260 | Msa0574300:intron | 25.0% |
| ! | ACCATAAATTTGAATAAAGC+CGG | - | chr4_1:77756371-77756390 | None:intergenic | 25.0% |
| ! | ATTGTATCAAAGGAATTACT+AGG | - | chr4_1:77756473-77756492 | None:intergenic | 25.0% |
| ! | TGGTAAAAGAATTGTATCAA+AGG | - | chr4_1:77756483-77756502 | None:intergenic | 25.0% |
| !! | TTTGATACAATTCTTTTACC+AGG | + | chr4_1:77756482-77756501 | Msa0574300:intron | 25.0% |
| !! | TTGATACAATTCTTTTACCA+GGG | + | chr4_1:77756483-77756502 | Msa0574300:intron | 25.0% |
| ! | CCATCATATATAAGATTAAG+AGG | - | chr4_1:77756549-77756568 | None:intergenic | 25.0% |
| ! | CCTCTTAATCTTATATATGA+TGG | + | chr4_1:77756546-77756565 | Msa0574300:intron | 25.0% |
| ! | TTATGCTAATTAGTTGGATT+AGG | - | chr4_1:77756655-77756674 | None:intergenic | 25.0% |
| ! | AATCTCAAGCATATTATTCA+TGG | - | chr4_1:77756775-77756794 | None:intergenic | 25.0% |
| !!! | AGGGATATTCATTTTTCTTT+TGG | + | chr4_1:77756848-77756867 | Msa0574300:intron | 25.0% |
| ! | ATAGAAAAAAACCACTAATC+TGG | + | chr4_1:77757035-77757054 | Msa0574300:intron | 25.0% |
| ! | TAATGAAGAAAATGTTGAGA+AGG | - | chr4_1:77757314-77757333 | None:intergenic | 25.0% |
| !! | TCAACATTTTCTTCATTACT+TGG | + | chr4_1:77757316-77757335 | Msa0574300:CDS | 25.0% |
| !!! | GTTTTAAACAAGTAAAGGTA+TGG | - | chr4_1:77757407-77757426 | None:intergenic | 25.0% |
| ! | TAACCTATTGCAGATAAAAT+TGG | - | chr4_1:77757464-77757483 | None:intergenic | 25.0% |
| ! | TTTATATTGTCTTCCTTTGT+TGG | + | chr4_1:77757517-77757536 | Msa0574300:CDS | 25.0% |
| !!! | CTTATTTTATATTTGAGCGT+CGG | + | chr4_1:77757635-77757654 | Msa0574300:intron | 25.0% |
| !!! | TTATTTTATATTTGAGCGTC+GGG | + | chr4_1:77757636-77757655 | Msa0574300:intron | 25.0% |
| !! | TTTTCATGGCATTTATTTGA+TGG | - | chr4_1:77757873-77757892 | None:intergenic | 25.0% |
| ! | AACAATAGACTAGAAACATT+AGG | - | chr4_1:77757922-77757941 | None:intergenic | 25.0% |
| !!! | AATGTATTTTGCTATGCTAT+TGG | + | chr4_1:77758308-77758327 | Msa0574300:CDS | 25.0% |
| ! | AACAAGAAACCATATGATAT+GGG | - | chr4_1:77758393-77758412 | None:intergenic | 25.0% |
| ! | AAACAAGAAACCATATGATA+TGG | - | chr4_1:77758394-77758413 | None:intergenic | 25.0% |
| ! | TCAATGTAGAAATAAGAAAC+AGG | + | chr4_1:77758425-77758444 | Msa0574300:intron | 25.0% |
| ! | CAATGTAGAAATAAGAAACA+GGG | + | chr4_1:77758426-77758445 | Msa0574300:intron | 25.0% |
| ! | AATGTAGAAATAAGAAACAG+GGG | + | chr4_1:77758427-77758446 | Msa0574300:intron | 25.0% |
| ! | TGATCATTGATGAATAACAA+TGG | - | chr4_1:77758473-77758492 | None:intergenic | 25.0% |
| ! | AAGACAGCTATAAAACTTTA+CGG | - | chr4_1:77758537-77758556 | None:intergenic | 25.0% |
| !! | TAAATGTTATAGCAAGTTGA+TGG | + | chr4_1:77758730-77758749 | Msa0574300:intron | 25.0% |
| ! | TTATATGGAAATGAGTAGTT+AGG | + | chr4_1:77758934-77758953 | Msa0574300:intron | 25.0% |
| ! | TATATGGAAATGAGTAGTTA+GGG | + | chr4_1:77758935-77758954 | Msa0574300:intron | 25.0% |
| ! | GCATGCAAATAAATAATTTC+AGG | - | chr4_1:77759115-77759134 | None:intergenic | 25.0% |
| !!! | TATGACTTAGTTTTGTTATG+TGG | + | chr4_1:77759240-77759259 | Msa0574300:intron | 25.0% |
| !!! | ATGACTTAGTTTTGTTATGT+GGG | + | chr4_1:77759241-77759260 | Msa0574300:intron | 25.0% |
| ! | TTAAGCAATTTGGTTAAATC+AGG | - | chr4_1:77759302-77759321 | None:intergenic | 25.0% |
| ! | ACAAAATTTCATAACTAGCA+TGG | - | chr4_1:77759532-77759551 | None:intergenic | 25.0% |
| !! | ATATGTACATCTGAAATTTG+GGG | - | chr4_1:77759578-77759597 | None:intergenic | 25.0% |
| !! | CTATATGTACATCTGAAATT+TGG | - | chr4_1:77759580-77759599 | None:intergenic | 25.0% |
| ! | AATTTCAGATGTACATATAG+TGG | + | chr4_1:77759580-77759599 | Msa0574300:three_prime_UTR | 25.0% |
| !!! | GTTTTTCAGTTTGAATTTCA+TGG | - | chr4_1:77759653-77759672 | None:intergenic | 25.0% |
| GCATTTCTTTCTTCAATTGT+TGG | + | chr4_1:77753097-77753116 | Msa0574300:intron | 30.0% | |
| CATTCAATACTCTTCTTATC+TGG | - | chr4_1:77753339-77753358 | None:intergenic | 30.0% | |
| ! | GTATAATGAGTTTTCCTATC+GGG | + | chr4_1:77753869-77753888 | Msa0574300:intron | 30.0% |
| ! | TATAATGAGTTTTCCTATCG+GGG | + | chr4_1:77753870-77753889 | Msa0574300:intron | 30.0% |
| AAAAGTAACTCGGATGTTAA+AGG | + | chr4_1:77753962-77753981 | Msa0574300:intron | 30.0% | |
| AAAGTAACTCGGATGTTAAA+GGG | + | chr4_1:77753963-77753982 | Msa0574300:intron | 30.0% | |
| AGAGAGATTAAGCATATGTT+TGG | + | chr4_1:77754491-77754510 | Msa0574300:intron | 30.0% | |
| AGATTAAGCATATGTTTGGT+TGG | + | chr4_1:77754495-77754514 | Msa0574300:intron | 30.0% | |
| GATTAAGCATATGTTTGGTT+GGG | + | chr4_1:77754496-77754515 | Msa0574300:intron | 30.0% | |
| !!! | TTTTTAGCTTCTCTTAAGGT+GGG | - | chr4_1:77754556-77754575 | None:intergenic | 30.0% |
| !!! | TTTTTTAGCTTCTCTTAAGG+TGG | - | chr4_1:77754557-77754576 | None:intergenic | 30.0% |
| TATATTAGTGTGATCCATTG+TGG | + | chr4_1:77754777-77754796 | Msa0574300:intron | 30.0% | |
| GACAGTGCAATATATATGAA+AGG | + | chr4_1:77754920-77754939 | Msa0574300:intron | 30.0% | |
| ! | GCAATATATATGAAAGGTAC+GGG | + | chr4_1:77754926-77754945 | Msa0574300:intron | 30.0% |
| ! | CAATATATATGAAAGGTACG+GGG | + | chr4_1:77754927-77754946 | Msa0574300:intron | 30.0% |
| TATACTCTCTTATGAAGGTT+TGG | - | chr4_1:77755292-77755311 | None:intergenic | 30.0% | |
| CAACATATACTCTCTTATGA+AGG | - | chr4_1:77755297-77755316 | None:intergenic | 30.0% | |
| CAGTCACATGATTACTTATA+CGG | + | chr4_1:77755380-77755399 | Msa0574300:intron | 30.0% | |
| ! | TTTTCTGCATTACAGTATAG+AGG | + | chr4_1:77755446-77755465 | Msa0574300:five_prime_UTR | 30.0% |
| TTTCTGTGTTGAAGAAGATA+TGG | + | chr4_1:77755548-77755567 | Msa0574300:exon | 30.0% | |
| TTGAAGAAGATATGGAAACT+GGG | + | chr4_1:77755556-77755575 | Msa0574300:exon | 30.0% | |
| TCATATCCAATGATTCTTCA+TGG | + | chr4_1:77755607-77755626 | Msa0574300:CDS | 30.0% | |
| GGCTAAATGATATATGACAA+TGG | - | chr4_1:77755785-77755804 | None:intergenic | 30.0% | |
| !! | CACACAATTTGTTGGTTAAA+TGG | - | chr4_1:77755843-77755862 | None:intergenic | 30.0% |
| AAGTAGAACACACAATTTGT+TGG | - | chr4_1:77755851-77755870 | None:intergenic | 30.0% | |
| GAAAGCAACAATATATTGGA+TGG | - | chr4_1:77755874-77755893 | None:intergenic | 30.0% | |
| TCATATGAATATGATGCCAT+TGG | + | chr4_1:77755910-77755929 | Msa0574300:intron | 30.0% | |
| ATTCAACCTACAGGATTAAA+AGG | + | chr4_1:77755955-77755974 | Msa0574300:intron | 30.0% | |
| ! | TCACTAAAGGCTTTGTATAA+AGG | + | chr4_1:77756073-77756092 | Msa0574300:intron | 30.0% |
| TCATATTCATTTATGGTGAG+TGG | + | chr4_1:77756133-77756152 | Msa0574300:intron | 30.0% | |
| TGATATAGAATGTCTGAACT+TGG | - | chr4_1:77756222-77756241 | None:intergenic | 30.0% | |
| TAAAGCAAAAGAGAAACACA+TGG | + | chr4_1:77756275-77756294 | Msa0574300:intron | 30.0% | |
| TAAATTTGAATAAAGCCGGA+AGG | - | chr4_1:77756367-77756386 | None:intergenic | 30.0% | |
| !! | TCCGGCTTTATTCAAATTTA+TGG | + | chr4_1:77756367-77756386 | Msa0574300:intron | 30.0% |
| ACAGATTATGCATTTATACC+TGG | - | chr4_1:77756421-77756440 | None:intergenic | 30.0% | |
| ! | TGATACAATTCTTTTACCAG+GGG | + | chr4_1:77756484-77756503 | Msa0574300:intron | 30.0% |
| AGCTGATTATGCTAATTAGT+TGG | - | chr4_1:77756661-77756680 | None:intergenic | 30.0% | |
| !! | TCAACGTTTTAACAATAGCA+AGG | + | chr4_1:77756828-77756847 | Msa0574300:intron | 30.0% |
| !! | CAACGTTTTAACAATAGCAA+GGG | + | chr4_1:77756829-77756848 | Msa0574300:intron | 30.0% |
| ! | AAATGCAAAAGCACAGTATT+AGG | - | chr4_1:77757067-77757086 | None:intergenic | 30.0% |
| CAAACAACATCACATGAATA+TGG | - | chr4_1:77757218-77757237 | None:intergenic | 30.0% | |
| !! | GGATCATTTTGATGTACATT+TGG | + | chr4_1:77757268-77757287 | Msa0574300:CDS | 30.0% |
| TCGTACAACATAACTTGATT+TGG | + | chr4_1:77757433-77757452 | Msa0574300:intron | 30.0% | |
| ! | TCTCCAATTTTATCTGCAAT+AGG | + | chr4_1:77757458-77757477 | Msa0574300:intron | 30.0% |
| ! | TGTTGGTTGACAAATGATAA+TGG | + | chr4_1:77758046-77758065 | Msa0574300:intron | 30.0% |
| TGGAAAAAACCATAACCATA+TGG | - | chr4_1:77758267-77758286 | None:intergenic | 30.0% | |
| !!! | TTTCCATTTTGTTTTTGCCA+CGG | + | chr4_1:77758281-77758300 | Msa0574300:CDS | 30.0% |
| !! | TATTTTGCTATGCTATTGGT+TGG | + | chr4_1:77758312-77758331 | Msa0574300:CDS | 30.0% |
| ATATGATATGGGACAAATAC+AGG | - | chr4_1:77758382-77758401 | None:intergenic | 30.0% | |
| TGTATTTGTCCCATATCATA+TGG | + | chr4_1:77758381-77758400 | Msa0574300:intron | 30.0% | |
| !! | TTATTGAGTTTTGTGGTTTC+TGG | - | chr4_1:77758505-77758524 | None:intergenic | 30.0% |
| ! | ACAACAGTTATTGAGTTTTG+TGG | - | chr4_1:77758512-77758531 | None:intergenic | 30.0% |
| AGACAGCTATAAAACTTTAC+GGG | - | chr4_1:77758536-77758555 | None:intergenic | 30.0% | |
| TATCAGCTCATTGAATTACT+TGG | - | chr4_1:77758595-77758614 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTGGAAAGTCAGAA+AGG | + | chr4_1:77758901-77758920 | Msa0574300:intron | 30.0% |
| !!! | GTTTTTTGGAAAGTCAGAAA+GGG | + | chr4_1:77758902-77758921 | Msa0574300:intron | 30.0% |
| AAAGGGATGAATGACTTATA+TGG | + | chr4_1:77758919-77758938 | Msa0574300:intron | 30.0% | |
| CAAACAATCATCACTTAATG+CGG | - | chr4_1:77759150-77759169 | None:intergenic | 30.0% | |
| AAGTGATGATTGTTTGAATG+TGG | + | chr4_1:77759154-77759173 | Msa0574300:intron | 30.0% | |
| !!! | TTAGTTTTGTTATGTGGGTT+GGG | + | chr4_1:77759246-77759265 | Msa0574300:intron | 30.0% |
| TAATCCCTTCATAAAGTGAA+AGG | - | chr4_1:77759780-77759799 | None:intergenic | 30.0% | |
| !! | AAACGCTTTGTTTGTGCTTT+CGG | - | chr4_1:77752908-77752927 | None:intergenic | 35.0% |
| GAAACAGAGAGAAATTGTTG+GGG | - | chr4_1:77752931-77752950 | None:intergenic | 35.0% | |
| GGAAACAGAGAGAAATTGTT+GGG | - | chr4_1:77752932-77752951 | None:intergenic | 35.0% | |
| TGGAAACAGAGAGAAATTGT+TGG | - | chr4_1:77752933-77752952 | None:intergenic | 35.0% | |
| TGAGAGATCGAAAAAGAGAA+TGG | + | chr4_1:77752985-77753004 | Msa0574300:five_prime_UTR | 35.0% | |
| ATCTATTAACGAGTGAACAC+TGG | - | chr4_1:77753022-77753041 | None:intergenic | 35.0% | |
| GAATGCAATTGCATAATCGA+CGG | + | chr4_1:77753354-77753373 | Msa0574300:intron | 35.0% | |
| AAAAGGAAAAGTTGAGATGG+TGG | + | chr4_1:77753414-77753433 | Msa0574300:intron | 35.0% | |
| TACTTCATGTGAGAGAAAGA+GGG | - | chr4_1:77753529-77753548 | None:intergenic | 35.0% | |
| !!! | TCTCTACTAGCTTTTTCTGA+GGG | - | chr4_1:77753567-77753586 | None:intergenic | 35.0% |
| !!! | ATCTCTACTAGCTTTTTCTG+AGG | - | chr4_1:77753568-77753587 | None:intergenic | 35.0% |
| TTCAATGGTAAATGAGACCT+TGG | + | chr4_1:77754027-77754046 | Msa0574300:intron | 35.0% | |
| TGCAGAAAGAAAAAAAGCCA+AGG | - | chr4_1:77754047-77754066 | None:intergenic | 35.0% | |
| ATATACAAGCGCATGTTTGA+TGG | - | chr4_1:77754530-77754549 | None:intergenic | 35.0% | |
| GAAATATTTGCTTTAGCGGT+GGG | - | chr4_1:77754625-77754644 | None:intergenic | 35.0% | |
| TGAAATATTTGCTTTAGCGG+TGG | - | chr4_1:77754626-77754645 | None:intergenic | 35.0% | |
| !! | ATACTATTGATGATGGTGTC+CGG | - | chr4_1:77754961-77754980 | None:intergenic | 35.0% |
| ATAGAGAAAAATTCGAACCC+CGG | + | chr4_1:77755000-77755019 | Msa0574300:intron | 35.0% | |
| !! | ATACTATTGATGATGGTGTC+CGG | - | chr4_1:77754961-77754980 | None:intergenic | 35.0% |
| TCTTATGAAGGTTTGGCAAT+CGG | - | chr4_1:77755285-77755304 | None:intergenic | 35.0% | |
| GTTGAAGAAGATATGGAAAC+TGG | + | chr4_1:77755555-77755574 | Msa0574300:exon | 35.0% | |
| TGAAGAAGATATGGAAACTG+GGG | + | chr4_1:77755557-77755576 | Msa0574300:exon | 35.0% | |
| ! | AAAGCAACAATGGTAATGAG+AGG | + | chr4_1:77755580-77755599 | Msa0574300:CDS | 35.0% |
| ACTGAACCATGAAGAATCAT+TGG | - | chr4_1:77755616-77755635 | None:intergenic | 35.0% | |
| ! | TTATGCCTTGATTTTTCTGC+TGG | + | chr4_1:77755677-77755696 | Msa0574300:CDS | 35.0% |
| ATTAGCCAGCAGAAAAATCA+AGG | - | chr4_1:77755685-77755704 | None:intergenic | 35.0% | |
| TCGTAGTGCTTTAACAGAAA+TGG | + | chr4_1:77755734-77755753 | Msa0574300:CDS | 35.0% | |
| ! | TGATTTGCCATAATAAGCGT+GGG | - | chr4_1:77755818-77755837 | None:intergenic | 35.0% |
| ! | ATGATTTGCCATAATAAGCG+TGG | - | chr4_1:77755819-77755838 | None:intergenic | 35.0% |
| ! | TTGCATCCTTTTAATCCTGT+AGG | - | chr4_1:77755964-77755983 | None:intergenic | 35.0% |
| ACAGGATTAAAAGGATGCAA+TGG | + | chr4_1:77755964-77755983 | Msa0574300:intron | 35.0% | |
| ! | AATGGTGGAAAAGACTGTTT+GGG | + | chr4_1:77755982-77756001 | Msa0574300:CDS | 35.0% |
| GAATGTCTGAACTTGGATTA+AGG | - | chr4_1:77756215-77756234 | None:intergenic | 35.0% | |
| !!! | ATCCCATTTTTTCTACCTTC+CGG | + | chr4_1:77756349-77756368 | Msa0574300:intron | 35.0% |
| GATTATGCATTTATACCTGG+AGG | - | chr4_1:77756418-77756437 | None:intergenic | 35.0% | |
| GGTAAAAGTAAGACTATACC+CGG | - | chr4_1:77756528-77756547 | None:intergenic | 35.0% | |
| ! | TGCTAATTAGTTGGATTAGG+AGG | - | chr4_1:77756652-77756671 | None:intergenic | 35.0% |
| !! | CACGTTGGTAAGATTTTCTT+CGG | + | chr4_1:77756726-77756745 | Msa0574300:intron | 35.0% |
| TTCTTCGGTTAGAGAAAAAC+AGG | + | chr4_1:77756741-77756760 | Msa0574300:intron | 35.0% | |
| !! | AAAAGTACTCTAGAGTGTAG+AGG | + | chr4_1:77756952-77756971 | Msa0574300:intron | 35.0% |
| !! | AAAGTACTCTAGAGTGTAGA+GGG | + | chr4_1:77756953-77756972 | Msa0574300:intron | 35.0% |
| AACACTGATCAGACAACAAT+TGG | - | chr4_1:77756985-77757004 | None:intergenic | 35.0% | |
| !! | TTAGGTTGATACCAGATTAG+TGG | - | chr4_1:77757049-77757068 | None:intergenic | 35.0% |
| CAAAGCTTTACAGGTAGAAT+AGG | - | chr4_1:77757093-77757112 | None:intergenic | 35.0% | |
| ! | TCTACCTGTAAAGCTTTGAT+AGG | + | chr4_1:77757095-77757114 | Msa0574300:intron | 35.0% |
| TATGCCTATCAAAGCTTTAC+AGG | - | chr4_1:77757102-77757121 | None:intergenic | 35.0% | |
| ATCACATGAATATGGCTGTA+TGG | - | chr4_1:77757210-77757229 | None:intergenic | 35.0% | |
| AAAATGTTGAGAAGGCAAGA+AGG | - | chr4_1:77757306-77757325 | None:intergenic | 35.0% | |
| CACAGATAGAACATACTTTC+GGG | - | chr4_1:77757383-77757402 | None:intergenic | 35.0% | |
| CCACAGATAGAACATACTTT+CGG | - | chr4_1:77757384-77757403 | None:intergenic | 35.0% | |
| TATCTGCAATAGGTTAATGC+TGG | + | chr4_1:77757468-77757487 | Msa0574300:intron | 35.0% | |
| CAAAACTGTTCAGCAAAAGT+TGG | - | chr4_1:77757566-77757585 | None:intergenic | 35.0% | |
| TTTGTGAGCTCATAACTATC+AGG | - | chr4_1:77757798-77757817 | None:intergenic | 35.0% | |
| ! | GGAATAAGTAGCAGTTTTCA+TGG | - | chr4_1:77757887-77757906 | None:intergenic | 35.0% |
| !! | CAAATGATAATGGCTGTTGT+TGG | + | chr4_1:77758056-77758075 | Msa0574300:intron | 35.0% |
| ! | GTTATTGCGACATTTTCAAC+AGG | + | chr4_1:77758109-77758128 | Msa0574300:CDS | 35.0% |
| ATTCAGAGTTTATGCTAACC+TGG | - | chr4_1:77758153-77758172 | None:intergenic | 35.0% | |
| GGGATGTGTAAGAAAGTTAT+TGG | - | chr4_1:77758203-77758222 | None:intergenic | 35.0% | |
| GATGATGTACCATATGGTTA+TGG | + | chr4_1:77758255-77758274 | Msa0574300:CDS | 35.0% | |
| !!! | TTCCATTTTGTTTTTGCCAC+GGG | + | chr4_1:77758282-77758301 | Msa0574300:CDS | 35.0% |
| TTCATTTACTATTCTGACCC+AGG | - | chr4_1:77758806-77758825 | None:intergenic | 35.0% | |
| GGGTCAGAATAGTAAATGAA+TGG | + | chr4_1:77758806-77758825 | Msa0574300:exon | 35.0% | |
| CAGAATAGTAAATGAATGGC+TGG | + | chr4_1:77758810-77758829 | Msa0574300:exon | 35.0% | |
| ACATCAAACTCAAGCAAGTA+AGG | - | chr4_1:77759051-77759070 | None:intergenic | 35.0% | |
| TTGATGTTATGCACTTCCAT+AGG | + | chr4_1:77759064-77759083 | Msa0574300:intron | 35.0% | |
| TGATGTTATGCACTTCCATA+GGG | + | chr4_1:77759065-77759084 | Msa0574300:intron | 35.0% | |
| AAATCATCATCACTACCCTA+TGG | - | chr4_1:77759083-77759102 | None:intergenic | 35.0% | |
| ! | AGGGTAGTGATGATGATTTA+TGG | + | chr4_1:77759084-77759103 | Msa0574300:intron | 35.0% |
| !!! | CTTAGTTTTGTTATGTGGGT+TGG | + | chr4_1:77759245-77759264 | Msa0574300:intron | 35.0% |
| GTAGTGAATGTCAGAATTAG+TGG | + | chr4_1:77759268-77759287 | Msa0574300:intron | 35.0% | |
| !!! | TTTTTTCCTATCTTCAGAGC+TGG | - | chr4_1:77759612-77759631 | None:intergenic | 35.0% |
| AAGGACTGTATATCTTCATG+CGG | - | chr4_1:77759761-77759780 | None:intergenic | 35.0% | |
| ACAGTCCTTTCACTTTATGA+AGG | + | chr4_1:77759772-77759791 | Msa0574300:three_prime_UTR | 35.0% | |
| CAGTCCTTTCACTTTATGAA+GGG | + | chr4_1:77759773-77759792 | Msa0574300:three_prime_UTR | 35.0% | |
| GAGAAAGACGAAGAAGATGA+AGG | - | chr4_1:77753065-77753084 | None:intergenic | 40.0% | |
| TCATCTTCTTCGTCTTTCTC+AGG | + | chr4_1:77753065-77753084 | Msa0574300:five_prime_UTR | 40.0% | |
| !! | GGTTGGTTACTTTGGAGTAA+AGG | + | chr4_1:77753435-77753454 | Msa0574300:intron | 40.0% |
| CTACTTCATGTGAGAGAAAG+AGG | - | chr4_1:77753530-77753549 | None:intergenic | 40.0% | |
| !! | TTTTCTGAGGGGAAATTTGC+AGG | - | chr4_1:77753555-77753574 | None:intergenic | 40.0% |
| !!! | CTCTACTAGCTTTTTCTGAG+GGG | - | chr4_1:77753566-77753585 | None:intergenic | 40.0% |
| TAAGCAAGCATTCATCGTTG+AGG | + | chr4_1:77753596-77753615 | Msa0574300:intron | 40.0% | |
| TATGCAAATTTGTCCCCGAT+AGG | - | chr4_1:77753886-77753905 | None:intergenic | 40.0% | |
| ! | GTGGACCCAATGATTTTCAA+TGG | + | chr4_1:77754012-77754031 | Msa0574300:intron | 40.0% |
| !! | TACTATTGATGATGGTGTCC+GGG | - | chr4_1:77754960-77754979 | None:intergenic | 40.0% |
| !! | TACTATTGATGATGGTGTCC+GGG | - | chr4_1:77754960-77754979 | None:intergenic | 40.0% |
| TTATGAAGGTTTGGCAATCG+GGG | - | chr4_1:77755283-77755302 | None:intergenic | 40.0% | |
| CTTATGAAGGTTTGGCAATC+GGG | - | chr4_1:77755284-77755303 | None:intergenic | 40.0% | |
| AAGAGTCTGTCATCTGTCAT+GGG | - | chr4_1:77755428-77755447 | None:intergenic | 40.0% | |
| AAAGAGTCTGTCATCTGTCA+TGG | - | chr4_1:77755429-77755448 | None:intergenic | 40.0% | |
| CTACGCAGTACATGAATGAA+TGG | - | chr4_1:77755526-77755545 | None:intergenic | 40.0% | |
| TCCAAGGATTGGATGCATTT+CGG | - | chr4_1:77755644-77755663 | None:intergenic | 40.0% | |
| AAATGCATCCAATCCTTGGA+TGG | + | chr4_1:77755644-77755663 | Msa0574300:CDS | 40.0% | |
| ATATCTTGCCATCCAAGGAT+TGG | - | chr4_1:77755655-77755674 | None:intergenic | 40.0% | |
| TAAGCATATCTTGCCATCCA+AGG | - | chr4_1:77755660-77755679 | None:intergenic | 40.0% | |
| !! | TTTTCTGCTGGCTAATCTGT+TGG | + | chr4_1:77755689-77755708 | Msa0574300:CDS | 40.0% |
| GGATTAAAAGGATGCAATGG+TGG | + | chr4_1:77755967-77755986 | Msa0574300:intron | 40.0% | |
| ! | CAATGGTGGAAAAGACTGTT+TGG | + | chr4_1:77755981-77756000 | Msa0574300:CDS | 40.0% |
| ! | ATGGTGGAAAAGACTGTTTG+GGG | + | chr4_1:77755983-77756002 | Msa0574300:CDS | 40.0% |
| ! | GGTTAGTCAAGATTGCTTTG+TGG | + | chr4_1:77756311-77756330 | Msa0574300:intron | 40.0% |
| AGCCGGAAGGTAGAAAAAAT+GGG | - | chr4_1:77756354-77756373 | None:intergenic | 40.0% | |
| AAGCCGGAAGGTAGAAAAAA+TGG | - | chr4_1:77756355-77756374 | None:intergenic | 40.0% | |
| TTATCTTTCAACAAGCCTCC+AGG | + | chr4_1:77756400-77756419 | Msa0574300:intron | 40.0% | |
| ! | TACAATTCTTTTACCAGGGG+AGG | + | chr4_1:77756487-77756506 | Msa0574300:intron | 40.0% |
| ! | TGTTCCTGTCATTCCTTTTC+AGG | + | chr4_1:77756621-77756640 | Msa0574300:intron | 40.0% |
| ! | GTTCCTGTCATTCCTTTTCA+GGG | + | chr4_1:77756622-77756641 | Msa0574300:intron | 40.0% |
| AAACCCTGAAAAGGAATGAC+AGG | - | chr4_1:77756628-77756647 | None:intergenic | 40.0% | |
| TTAGGAGGAAAACCCTGAAA+AGG | - | chr4_1:77756637-77756656 | None:intergenic | 40.0% | |
| GCATAATCAGCTTCATCACA+TGG | + | chr4_1:77756669-77756688 | Msa0574300:intron | 40.0% | |
| CTGAAAAATATGCAGCACGT+TGG | + | chr4_1:77756711-77756730 | Msa0574300:intron | 40.0% | |
| !! | AAGTACTCTAGAGTGTAGAG+GGG | + | chr4_1:77756954-77756973 | Msa0574300:intron | 40.0% |
| ! | CCGAAAGTATGTTCTATCTG+TGG | + | chr4_1:77757381-77757400 | Msa0574300:intron | 40.0% |
| AATGCTGGTATTCTAACTCC+AGG | + | chr4_1:77757483-77757502 | Msa0574300:intron | 40.0% | |
| ATGCTGGTATTCTAACTCCA+GGG | + | chr4_1:77757484-77757503 | Msa0574300:intron | 40.0% | |
| ! | ATGCTTAGCCAGTCTGTTTT+GGG | - | chr4_1:77757721-77757740 | None:intergenic | 40.0% |
| TGGATACACGTATGTGACAA+TGG | - | chr4_1:77757853-77757872 | None:intergenic | 40.0% | |
| CATAGATTCCAAATGCTTCC+AGG | + | chr4_1:77758132-77758151 | Msa0574300:CDS | 40.0% | |
| !! | TATGCTAACCTGGAAGCATT+TGG | - | chr4_1:77758143-77758162 | None:intergenic | 40.0% |
| ! | TTGCTATGCTATTGGTTGGA+TGG | + | chr4_1:77758316-77758335 | Msa0574300:CDS | 40.0% |
| TTGCATGACAGAATATCAGC+TGG | + | chr4_1:77758559-77758578 | Msa0574300:intron | 40.0% | |
| CATTGAATTACTTGGCGTCA+GGG | - | chr4_1:77758587-77758606 | None:intergenic | 40.0% | |
| TCATTGAATTACTTGGCGTC+AGG | - | chr4_1:77758588-77758607 | None:intergenic | 40.0% | |
| TTCTCACTTGTAGTGTTCGT+TGG | + | chr4_1:77758675-77758694 | Msa0574300:intron | 40.0% | |
| TGCAGATGGACAATTGATGT+GGG | + | chr4_1:77758769-77758788 | Msa0574300:intron | 40.0% | |
| AGGGATTTGATGAACGTGAT+TGG | + | chr4_1:77758954-77758973 | Msa0574300:intron | 40.0% | |
| ATATCGCCATTGACCATTGT+AGG | + | chr4_1:77759012-77759031 | Msa0574300:intron | 40.0% | |
| TTTAACCATCGCTCCTACAA+TGG | - | chr4_1:77759028-77759047 | None:intergenic | 40.0% | |
| TGCTGATAGCTCCAATGATA+TGG | + | chr4_1:77759463-77759482 | Msa0574300:three_prime_UTR | 40.0% | |
| TGTCTGCACTTCCATATCAT+TGG | - | chr4_1:77759477-77759496 | None:intergenic | 40.0% | |
| ! | ATATGGAAGTGCAGACAAGT+TGG | + | chr4_1:77759480-77759499 | Msa0574300:three_prime_UTR | 40.0% |
| GATTGTTCTTTAGTGTGCAC+TGG | + | chr4_1:77759674-77759693 | Msa0574300:three_prime_UTR | 40.0% | |
| CTGGACAGAATCAATGTTTC+TGG | + | chr4_1:77759693-77759712 | Msa0574300:three_prime_UTR | 40.0% | |
| TGACACATGTACAGGTAAGA+GGG | - | chr4_1:77759816-77759835 | None:intergenic | 40.0% | |
| TTTCTCAGTGACACATGTAC+AGG | - | chr4_1:77759824-77759843 | None:intergenic | 40.0% | |
| TTAACGAGTGAACACTGGAG+CGG | - | chr4_1:77753017-77753036 | None:intergenic | 45.0% | |
| GAAGAAGATGAAGGCAATGG+TGG | - | chr4_1:77753056-77753075 | None:intergenic | 45.0% | |
| GACGAAGAAGATGAAGGCAA+TGG | - | chr4_1:77753059-77753078 | None:intergenic | 45.0% | |
| ! | GGAAAAGTTGAGATGGTGGT+TGG | + | chr4_1:77753418-77753437 | Msa0574300:intron | 45.0% |
| ! | GAGATGGTGGTTGGTTACTT+TGG | + | chr4_1:77753427-77753446 | Msa0574300:intron | 45.0% |
| !! | TGTGATTGCATCGGCTGTAT+CGG | - | chr4_1:77753680-77753699 | None:intergenic | 45.0% |
| CTCGCAGCAAATTGTGTTGT+TGG | + | chr4_1:77753709-77753728 | Msa0574300:intron | 45.0% | |
| CACAATAAACGAGGAATCCG+TGG | + | chr4_1:77754272-77754291 | Msa0574300:intron | 45.0% | |
| ATTGATCGGAGTTCGAACCA+CGG | - | chr4_1:77754292-77754311 | None:intergenic | 45.0% | |
| ACTAAGCTTCTTCTCCAACG+TGG | + | chr4_1:77754576-77754595 | Msa0574300:intron | 45.0% | |
| CTAAGCTTCTTCTCCAACGT+GGG | + | chr4_1:77754577-77754596 | Msa0574300:intron | 45.0% | |
| ACTGTCGAGCTTAGCTAAGT+TGG | + | chr4_1:77754893-77754912 | Msa0574300:intron | 45.0% | |
| !! | ACTATTGATGATGGTGTCCG+GGG | - | chr4_1:77754959-77754978 | None:intergenic | 45.0% |
| !! | ACTATTGATGATGGTGTCCG+GGG | - | chr4_1:77754959-77754978 | None:intergenic | 45.0% |
| GAAACTGGGGAAAGCAACAA+TGG | + | chr4_1:77755570-77755589 | Msa0574300:CDS | 45.0% | |
| TCCGAAATGCATCCAATCCT+TGG | + | chr4_1:77755640-77755659 | Msa0574300:CDS | 45.0% | |
| TTGCAGTCCCACGCTTATTA+TGG | + | chr4_1:77755808-77755827 | Msa0574300:intron | 45.0% | |
| TGGTGGAAAAGACTGTTTGG+GGG | + | chr4_1:77755984-77756003 | Msa0574300:CDS | 45.0% | |
| AAGAGAAACACATGGCACTC+TGG | + | chr4_1:77756283-77756302 | Msa0574300:intron | 45.0% | |
| ! | AATTCTTTTACCAGGGGAGG+TGG | + | chr4_1:77756490-77756509 | Msa0574300:intron | 45.0% |
| CACCAAACAGACGACATATG+CGG | - | chr4_1:77757247-77757266 | None:intergenic | 45.0% | |
| GCATATGTCGTCTGTTTGGT+GGG | + | chr4_1:77757246-77757265 | Msa0574300:CDS | 45.0% | |
| ! | CATATGTCGTCTGTTTGGTG+GGG | + | chr4_1:77757247-77757266 | Msa0574300:CDS | 45.0% |
| TATTCTAACTCCAGGGCTGA+TGG | + | chr4_1:77757491-77757510 | Msa0574300:intron | 45.0% | |
| ATTCTAACTCCAGGGCTGAT+GGG | + | chr4_1:77757492-77757511 | Msa0574300:intron | 45.0% | |
| TTCTAATGGCGCACCAACAA+AGG | - | chr4_1:77757533-77757552 | None:intergenic | 45.0% | |
| TTTGTTGGTGCGCCATTAGA+AGG | + | chr4_1:77757532-77757551 | Msa0574300:CDS | 45.0% | |
| TTGGCAAACCTGCCTTCTAA+TGG | - | chr4_1:77757547-77757566 | None:intergenic | 45.0% | |
| TTTGTATGCAGTGAACCTGC+TGG | + | chr4_1:77757664-77757683 | Msa0574300:intron | 45.0% | |
| ! | GATGCTTAGCCAGTCTGTTT+TGG | - | chr4_1:77757722-77757741 | None:intergenic | 45.0% |
| TATGGTACATCATCCTCTGC+TGG | - | chr4_1:77758249-77758268 | None:intergenic | 45.0% | |
| GCAGAGGATGATGTACCATA+TGG | + | chr4_1:77758249-77758268 | Msa0574300:CDS | 45.0% | |
| CTCCCGTGGCAAAAACAAAA+TGG | - | chr4_1:77758287-77758306 | None:intergenic | 45.0% | |
| AGCAAAATACATTGCTCCCG+TGG | - | chr4_1:77758301-77758320 | None:intergenic | 45.0% | |
| TGGGACAAATACAGGAGAGT+AGG | - | chr4_1:77758374-77758393 | None:intergenic | 45.0% | |
| TGCCTTCATTCTTCTGCAGA+TGG | + | chr4_1:77758755-77758774 | Msa0574300:intron | 45.0% | |
| GTCCATCTGCAGAAGAATGA+AGG | - | chr4_1:77758760-77758779 | None:intergenic | 45.0% | |
| CTGCAGATGGACAATTGATG+TGG | + | chr4_1:77758768-77758787 | Msa0574300:intron | 45.0% | |
| GCAGATGGACAATTGATGTG+GGG | + | chr4_1:77758770-77758789 | Msa0574300:intron | 45.0% | |
| ACGCGAGACATATGAGACAT+GGG | - | chr4_1:77758985-77759004 | None:intergenic | 45.0% | |
| ATCGCTCCTACAATGGTCAA+TGG | - | chr4_1:77759021-77759040 | None:intergenic | 45.0% | |
| ATTGACCATTGTAGGAGCGA+TGG | + | chr4_1:77759020-77759039 | Msa0574300:intron | 45.0% | |
| TTTCCTATCTTCAGAGCTGG+AGG | - | chr4_1:77759609-77759628 | None:intergenic | 45.0% | |
| ! | TGCACGCATACTGGTTGAAT+TGG | + | chr4_1:77759722-77759741 | Msa0574300:three_prime_UTR | 45.0% |
| GTGACACATGTACAGGTAAG+AGG | - | chr4_1:77759817-77759836 | None:intergenic | 45.0% | |
| !!! | TTTATTTTTAATACTAATAT+AGG | - | chr4_1:77753781-77753800 | None:intergenic | 5.0% |
| !! | ATATTTATTAAGTAATTTAA+TGG | + | chr4_1:77754240-77754259 | Msa0574300:intron | 5.0% |
| !! | AATATAAAATAAGTAAAAAA+TGG | - | chr4_1:77757628-77757647 | None:intergenic | 5.0% |
| TGAAGCTCGAGGGTCATTGA+TGG | - | chr4_1:77753990-77754009 | None:intergenic | 50.0% | |
| TCAATGACCCTCGAGCTTCA+AGG | + | chr4_1:77753990-77754009 | Msa0574300:intron | 50.0% | |
| ! | TCCAACGTGGGTTTTTGTCG+CGG | + | chr4_1:77754589-77754608 | Msa0574300:intron | 50.0% |
| ! | CGAGCTTAGCTAAGTTGGCA+AGG | + | chr4_1:77754898-77754917 | Msa0574300:intron | 50.0% |
| ! | TGCTGGCTAATCTGTTGGCA+TGG | + | chr4_1:77755694-77755713 | Msa0574300:CDS | 50.0% |
| GCTGGCTAATCTGTTGGCAT+GGG | + | chr4_1:77755695-77755714 | Msa0574300:CDS | 50.0% | |
| ATAAGCGTGGGACTGCAAGA+AGG | - | chr4_1:77755806-77755825 | None:intergenic | 50.0% | |
| AAAGACTGTTTGGGGGCTGA+AGG | + | chr4_1:77755991-77756010 | Msa0574300:CDS | 50.0% | |
| GAAACACATGGCACTCTGGA+TGG | + | chr4_1:77756287-77756306 | Msa0574300:intron | 50.0% | |
| GACCGCATATGTCGTCTGTT+TGG | + | chr4_1:77757242-77757261 | Msa0574300:CDS | 50.0% | |
| CGCATATGTCGTCTGTTTGG+TGG | + | chr4_1:77757245-77757264 | Msa0574300:CDS | 50.0% | |
| TTGAGAAGGCAAGAAGGCTC+TGG | - | chr4_1:77757300-77757319 | None:intergenic | 50.0% | |
| TTCTAACTCCAGGGCTGATG+GGG | + | chr4_1:77757493-77757512 | Msa0574300:intron | 50.0% | |
| ATATAAAGCCCCATCAGCCC+TGG | - | chr4_1:77757504-77757523 | None:intergenic | 50.0% | |
| ! | CTGATGCAGTTTTCTCCAGC+AGG | - | chr4_1:77757682-77757701 | None:intergenic | 50.0% |
| CTGCTGGAGAAAACTGCATC+AGG | + | chr4_1:77757680-77757699 | Msa0574300:intron | 50.0% | |
| ACTCTGCACCCAAAACAGAC+TGG | + | chr4_1:77757710-77757729 | Msa0574300:intron | 50.0% | |
| CTTACACATCCCTGCAGTTC+CGG | + | chr4_1:77758211-77758230 | Msa0574300:intron | 50.0% | |
| ATCATCCTTCCGGAACTGCA+GGG | - | chr4_1:77758223-77758242 | None:intergenic | 50.0% | |
| TATCATCCTTCCGGAACTGC+AGG | - | chr4_1:77758224-77758243 | None:intergenic | 50.0% | |
| CTGCTGGTGTATCATCCTTC+CGG | - | chr4_1:77758233-77758252 | None:intergenic | 50.0% | |
| GAAGGATGATACACCAGCAG+AGG | + | chr4_1:77758233-77758252 | Msa0574300:CDS | 50.0% | |
| TTTGTGGCACTGCTGAGTGA+TGG | - | chr4_1:77758624-77758643 | None:intergenic | 50.0% | |
| GATGGACAATTGATGTGGGG+TGG | + | chr4_1:77758773-77758792 | Msa0574300:intron | 50.0% | |
| TACTATTCTGACCCAGGTGC+TGG | - | chr4_1:77758800-77758819 | None:intergenic | 50.0% | |
| CACGCGAGACATATGAGACA+TGG | - | chr4_1:77758986-77759005 | None:intergenic | 50.0% | |
| !! | ACTCCTCCAGCTCTGAAGAT+AGG | + | chr4_1:77759603-77759622 | Msa0574300:three_prime_UTR | 50.0% |
| TGGCACAAATGCACGCATAC+TGG | + | chr4_1:77759713-77759732 | Msa0574300:three_prime_UTR | 50.0% | |
| ATGACCCTCGAGCTTCAAGG+TGG | + | chr4_1:77753993-77754012 | Msa0574300:intron | 55.0% | |
| TCCGCGACAAAAACCCACGT+TGG | - | chr4_1:77754593-77754612 | None:intergenic | 55.0% | |
| ! | AGGCGTTTTGCGTGTGAGCT+TGG | + | chr4_1:77756011-77756030 | Msa0574300:CDS | 55.0% |
| ! | GGCGTTTTGCGTGTGAGCTT+GGG | + | chr4_1:77756012-77756031 | Msa0574300:CDS | 55.0% |
| ACACATGGCACTCTGGATGG+TGG | + | chr4_1:77756290-77756309 | Msa0574300:intron | 55.0% | |
| GAGACACGCTGGTCATGAGT+TGG | - | chr4_1:77757356-77757375 | None:intergenic | 55.0% | |
| TTGGTGCGCCATTAGAAGGC+AGG | + | chr4_1:77757536-77757555 | Msa0574300:CDS | 55.0% | |
| GGGTCCACCTTGAAGCTCGA+GGG | - | chr4_1:77754000-77754019 | None:intergenic | 60.0% | |
| TGGGTCCACCTTGAAGCTCG+AGG | - | chr4_1:77754001-77754020 | None:intergenic | 60.0% | |
| AAGGTACGGGGTTCGAACCC+CGG | + | chr4_1:77754939-77754958 | Msa0574300:intron | 60.0% | |
| ! | GCATGGGCTGCTCGTGACTA+TGG | + | chr4_1:77755711-77755730 | Msa0574300:CDS | 60.0% |
| !! | GAGGTGGCGCATTTTGGTGC+CGG | + | chr4_1:77756506-77756525 | Msa0574300:intron | 60.0% |
| !!! | AGGTGGCGCATTTTGGTGCC+GGG | + | chr4_1:77756507-77756526 | Msa0574300:intron | 60.0% |
| ! | TTTCGGGTGCAGAGACACGC+TGG | - | chr4_1:77757367-77757386 | None:intergenic | 60.0% |
| CACATCCCTGCAGTTCCGGA+AGG | + | chr4_1:77758215-77758234 | Msa0574300:intron | 60.0% | |
| CGAGTGAACACTGGAGCGGC+TGG | - | chr4_1:77753013-77753032 | None:intergenic | 65.0% | |
| CCAAAATGCGCCACCTCCCC+TGG | - | chr4_1:77756503-77756522 | None:intergenic | 65.0% | |
| ! | CCAGGGGAGGTGGCGCATTT+TGG | + | chr4_1:77756500-77756519 | Msa0574300:intron | 65.0% |
| ATGTGGGGTGGACCAGCACC+TGG | + | chr4_1:77758785-77758804 | Msa0574300:CDS | 65.0% | |
| TGTGGGGTGGACCAGCACCT+GGG | + | chr4_1:77758786-77758805 | Msa0574300:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 77752873 | 77759939 | 77752873 | ID=Msa0574300;Name=Msa0574300 |
| chr4_1 | mRNA | 77752873 | 77759939 | 77752873 | ID=Msa0574300-mRNA-1;Parent=Msa0574300;Name=Msa0574300-mRNA-1;_AED=0.18;_eAED=0.18;_QI=346|0.5|0.77|1|0.75|0.55|9|513|253 |
| chr4_1 | exon | 77752873 | 77753086 | 77752873 | ID=Msa0574300-mRNA-1:exon:27407;Parent=Msa0574300-mRNA-1 |
| chr4_1 | exon | 77755435 | 77755759 | 77755435 | ID=Msa0574300-mRNA-1:exon:27408;Parent=Msa0574300-mRNA-1 |
| chr4_1 | exon | 77755968 | 77756041 | 77755968 | ID=Msa0574300-mRNA-1:exon:27409;Parent=Msa0574300-mRNA-1 |
| chr4_1 | exon | 77757215 | 77757386 | 77757215 | ID=Msa0574300-mRNA-1:exon:27410;Parent=Msa0574300-mRNA-1 |
| chr4_1 | exon | 77757505 | 77757557 | 77757505 | ID=Msa0574300-mRNA-1:exon:27411;Parent=Msa0574300-mRNA-1 |
| chr4_1 | exon | 77758082 | 77758153 | 77758082 | ID=Msa0574300-mRNA-1:exon:27412;Parent=Msa0574300-mRNA-1 |
| chr4_1 | exon | 77758228 | 77758381 | 77758228 | ID=Msa0574300-mRNA-1:exon:27413;Parent=Msa0574300-mRNA-1 |
| chr4_1 | exon | 77758774 | 77758847 | 77758774 | ID=Msa0574300-mRNA-1:exon:27414;Parent=Msa0574300-mRNA-1 |
| chr4_1 | exon | 77759457 | 77759939 | 77759457 | ID=Msa0574300-mRNA-1:exon:27415;Parent=Msa0574300-mRNA-1 |
| chr4_1 | five_prime_UTR | 77752873 | 77753086 | 77752873 | ID=Msa0574300-mRNA-1:five_prime_utr;Parent=Msa0574300-mRNA-1 |
| chr4_1 | five_prime_UTR | 77755435 | 77755566 | 77755435 | ID=Msa0574300-mRNA-1:five_prime_utr;Parent=Msa0574300-mRNA-1 |
| chr4_1 | CDS | 77755567 | 77755759 | 77755567 | ID=Msa0574300-mRNA-1:cds;Parent=Msa0574300-mRNA-1 |
| chr4_1 | CDS | 77755968 | 77756041 | 77755968 | ID=Msa0574300-mRNA-1:cds;Parent=Msa0574300-mRNA-1 |
| chr4_1 | CDS | 77757215 | 77757386 | 77757215 | ID=Msa0574300-mRNA-1:cds;Parent=Msa0574300-mRNA-1 |
| chr4_1 | CDS | 77757505 | 77757557 | 77757505 | ID=Msa0574300-mRNA-1:cds;Parent=Msa0574300-mRNA-1 |
| chr4_1 | CDS | 77758082 | 77758153 | 77758082 | ID=Msa0574300-mRNA-1:cds;Parent=Msa0574300-mRNA-1 |
| chr4_1 | CDS | 77758228 | 77758381 | 77758228 | ID=Msa0574300-mRNA-1:cds;Parent=Msa0574300-mRNA-1 |
| chr4_1 | CDS | 77758774 | 77758817 | 77758774 | ID=Msa0574300-mRNA-1:cds;Parent=Msa0574300-mRNA-1 |
| chr4_1 | three_prime_UTR | 77758818 | 77758847 | 77758818 | ID=Msa0574300-mRNA-1:three_prime_utr;Parent=Msa0574300-mRNA-1 |
| chr4_1 | three_prime_UTR | 77759457 | 77759939 | 77759457 | ID=Msa0574300-mRNA-1:three_prime_utr;Parent=Msa0574300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
