AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1452140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1452140 MtrunA17_Chr1g0195111 98.228 1016 10 2 1 1013 1 1011 0.0 2061
Msa1452140 MtrunA17_Chr7g0271961 55.217 1016 408 17 13 1013 16 999 0.0 1049
Msa1452140 MtrunA17_Chr7g0269691 79.964 549 102 2 8 553 12 555 0.0 883
Msa1452140 MtrunA17_Chr3g0102921 49.410 848 369 18 23 822 41 876 0.0 738
Msa1452140 MtrunA17_Chr7g0269681 77.754 463 98 3 553 1012 21 481 0.0 729
Msa1452140 MtrunA17_Chr5g0447041 47.976 840 351 15 23 784 37 868 0.0 728
Msa1452140 MtrunA17_Chr1g0192481 72.664 428 108 5 338 762 3 424 0.0 635
Msa1452140 MtrunA17_Chr7g0257301 45.786 795 336 19 25 757 14 775 0.0 625
Msa1452140 MtrunA17_Chr5g0411971 43.243 444 224 7 331 760 327 756 8.63e-104 349
Msa1452140 MtrunA17_Chr5g0421521 42.793 444 226 7 331 760 302 731 1.04e-102 344
Msa1452140 MtrunA17_Chr5g0421591 45.918 392 194 5 373 760 354 731 5.70e-102 340
Msa1452140 MtrunA17_Chr2g0312631 42.955 440 219 9 351 772 334 759 1.04e-100 340
Msa1452140 MtrunA17_Chr1g0191851 47.594 374 172 5 379 744 133 490 1.41e-100 333
Msa1452140 MtrunA17_Chr1g0192491 60.150 266 99 1 4 262 9 274 1.64e-99 314
Msa1452140 MtrunA17_Chr7g0272871 45.722 374 191 4 373 744 107 470 3.43e-94 315
Msa1452140 MtrunA17_Chr2g0319271 43.979 382 171 11 381 736 387 751 3.51e-87 296
Msa1452140 MtrunA17_Chr4g0042061 44.709 378 173 11 381 736 420 783 4.75e-85 291
Msa1452140 MtrunA17_Chr2g0280421 43.514 370 168 10 381 731 425 772 1.50e-84 290
Msa1452140 MtrunA17_Chr8g0386891 70.899 189 55 0 573 761 4 192 1.61e-83 276
Msa1452140 MtrunA17_Chr6g0484501 63.208 212 77 1 551 761 11 222 1.43e-76 251
Msa1452140 MtrunA17_Chr8g0386901 55.745 235 97 3 321 553 411 640 1.58e-76 265
Msa1452140 MtrunA17_Chr4g0049011 40.054 372 190 8 381 732 267 625 3.06e-76 263
Msa1452140 MtrunA17_Chr5g0407791 38.557 402 231 7 357 756 853 1240 2.58e-74 268
Msa1452140 MtrunA17_Chr6g0484511 52.679 224 100 2 331 553 227 445 1.32e-73 252
Msa1452140 MtrunA17_Chr8g0369881 39.084 371 211 5 357 725 839 1196 2.67e-71 259
Msa1452140 MtrunA17_Chr8g0390981 51.681 238 108 3 331 566 453 685 5.25e-70 247
Msa1452140 MtrunA17_Chr8g0390991 65.079 189 63 1 573 761 4 189 9.94e-69 240
Msa1452140 MtrunA17_Chr1g0191181 41.828 361 187 9 374 726 69 414 1.75e-65 233
Msa1452140 MtrunA17_Chr4g0069141 36.321 424 209 14 398 784 153 552 3.21e-59 223
Msa1452140 MtrunA17_Chr4g0045381 38.947 380 202 12 395 754 190 559 1.46e-58 221
Msa1452140 MtrunA17_Chr2g0322291 40.263 380 193 13 398 755 88 455 2.19e-58 219
Msa1452140 MtrunA17_Chr3g0122121 37.783 397 206 12 399 769 99 480 5.43e-58 218
Msa1452140 MtrunA17_Chr3g0132921 32.668 401 231 8 396 765 7 399 1.63e-57 207
Msa1452140 MtrunA17_Chr8g0367581 36.386 415 214 16 376 771 129 512 1.07e-56 214
Msa1452140 MtrunA17_Chr5g0398521 37.151 358 189 9 395 726 54 401 8.48e-55 206
Msa1452140 MtrunA17_Chr3g0134191 33.086 405 226 10 399 766 9 405 4.38e-54 205
Msa1452140 MtrunA17_Chr1g0178411 36.648 352 195 8 398 725 13 360 5.26e-54 204
Msa1452140 MtrunA17_Chr7g0266631 35.176 398 225 11 390 759 1 393 5.75e-54 204
Msa1452140 MtrunA17_Chr1g0182151 37.429 350 191 9 398 725 54 397 1.02e-53 204
Msa1452140 MtrunA17_Chr8g0377731 37.731 379 200 10 399 755 56 420 1.26e-53 204
Msa1452140 MtrunA17_Chr2g0327581 34.896 384 224 12 398 759 49 428 3.80e-53 202
Msa1452140 MtrunA17_Chr5g0427481 34.197 386 212 11 396 753 15 386 4.81e-53 202
Msa1452140 MtrunA17_Chr4g0053211 34.243 403 214 13 398 758 12 405 1.17e-52 200
Msa1452140 MtrunA17_Chr2g0307481 36.800 375 212 10 399 761 69 430 2.08e-52 195
Msa1452140 MtrunA17_Chr1g0153061 34.005 397 217 12 399 758 9 397 2.87e-52 199
Msa1452140 MtrunA17_Chr1g0193221 37.736 371 197 11 399 753 4 356 6.10e-52 199
Msa1452140 MtrunA17_Chr4g0062291 39.088 307 172 6 440 741 174 470 2.75e-51 192
Msa1452140 MtrunA17_Chr1g0152231 36.639 363 200 10 399 745 4 352 3.29e-51 194
Msa1452140 MtrunA17_Chr7g0245931 35.537 363 195 9 391 726 45 395 4.57e-51 194
Msa1452140 MtrunA17_Chr5g0405181 36.729 373 199 13 399 753 21 374 2.66e-49 189
Msa1452140 MtrunA17_Chr8g0372171 36.533 375 201 14 399 755 20 375 5.05e-48 186
Msa1452140 MtrunA17_Chr4g0036001 35.450 378 214 11 391 753 14 376 2.51e-47 183
Msa1452140 MtrunA17_Chr6g0483701 37.425 334 179 12 432 753 67 382 5.73e-47 182
Msa1452140 MtrunA17_Chr4g0070001 33.509 379 227 11 392 762 136 497 1.50e-44 175
Msa1452140 MtrunA17_Chr3g0145071 35.262 363 213 11 398 753 99 446 2.79e-44 174
Msa1452140 MtrunA17_Chr4g0035661 34.121 381 215 12 387 753 78 436 9.02e-44 172
Msa1452140 MtrunA17_Chr7g0258991 33.592 387 223 11 381 753 56 422 1.11e-43 172
Msa1452140 MtrunA17_Chr3g0142261 35.294 323 183 9 441 753 66 372 1.13e-43 173
Msa1452140 MtrunA17_Chr5g0445211 31.899 395 231 11 398 769 74 453 5.30e-42 167
Msa1452140 MtrunA17_Chr3g0101021 33.898 354 206 11 438 769 104 451 2.25e-40 162
Msa1452140 MtrunA17_Chr7g0238581 31.608 367 188 14 390 729 16 346 7.61e-35 142
Msa1452140 MtrunA17_Chr2g0331761 31.081 296 182 6 439 728 232 511 2.30e-34 141
Msa1452140 MtrunA17_Chr4g0067421 32.459 305 170 8 439 725 253 539 7.31e-34 140
Msa1452140 MtrunA17_Chr2g0295881 32.131 305 173 7 439 725 245 533 7.49e-34 140
Msa1452140 MtrunA17_Chr6g0485471 30.405 296 184 6 439 728 162 441 4.27e-33 137
Msa1452140 MtrunA17_Chr1g0187411 31.034 319 178 10 438 728 167 471 6.92e-28 121
Msa1452140 MtrunA17_Chr6g0470541 28.483 323 187 16 399 704 6 301 1.45e-17 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1452140 AT2G47500.1 64.497 1014 308 11 2 1008 9 977 0.0 1246
Msa1452140 AT2G47500.2 65.641 975 286 10 2 969 9 941 0.0 1231
Msa1452140 AT5G27000.1 55.730 1021 372 24 4 998 11 977 0.0 1030
Msa1452140 AT1G09170.5 49.098 1053 437 26 6 996 10 1025 0.0 907
Msa1452140 AT1G09170.2 57.107 795 286 11 6 757 10 792 0.0 894
Msa1452140 AT1G09170.4 57.107 795 286 11 6 757 10 792 0.0 893
Msa1452140 AT1G09170.3 56.505 784 286 11 6 746 10 781 0.0 873
Msa1452140 AT1G09170.7 56.505 784 286 11 6 746 10 781 0.0 873
Msa1452140 AT1G09170.1 47.009 1053 423 26 6 996 10 989 0.0 843
Msa1452140 AT1G09170.6 54.720 731 276 11 6 693 10 728 0.0 786
Msa1452140 AT1G09170.8 54.720 731 276 11 6 693 10 728 0.0 786
Msa1452140 AT3G44730.2 49.410 848 360 19 25 822 21 849 0.0 750
Msa1452140 AT3G44730.3 49.410 848 360 19 25 822 21 849 0.0 750
Msa1452140 AT3G44730.1 49.267 818 347 18 55 822 5 804 0.0 720
Msa1452140 AT3G44730.4 49.267 818 347 18 55 822 5 804 0.0 720
Msa1452140 AT3G10310.2 46.538 780 362 18 21 780 3 747 0.0 601
Msa1452140 AT3G10310.1 46.538 780 362 18 21 780 3 747 0.0 600
Msa1452140 AT1G73860.2 58.315 451 180 4 313 761 347 791 4.77e-173 530
Msa1452140 AT1G73860.1 58.315 451 180 4 313 761 430 874 1.43e-171 529
Msa1452140 AT1G18410.3 58.980 451 176 5 313 761 410 853 2.89e-171 528
Msa1452140 AT1G18410.2 58.980 451 176 5 313 761 410 853 2.89e-171 528
Msa1452140 AT1G18410.4 58.980 451 176 5 313 761 553 996 2.25e-169 527
Msa1452140 AT1G18410.1 58.758 451 169 6 313 761 553 988 2.55e-166 519
Msa1452140 AT1G63640.5 57.456 456 183 5 312 762 378 827 3.25e-166 516
Msa1452140 AT1G63640.1 57.456 456 183 5 312 762 388 837 4.28e-166 516
Msa1452140 AT1G63640.4 57.456 456 183 5 312 762 388 837 4.28e-166 516
Msa1452140 AT1G63640.3 57.456 456 183 5 312 762 388 837 4.88e-166 516
Msa1452140 AT1G63640.2 57.768 457 173 7 312 762 388 830 2.95e-165 514
Msa1452140 AT1G18410.5 58.093 451 167 7 313 761 400 830 1.14e-163 507
Msa1452140 AT5G41310.1 55.333 450 175 4 314 761 343 768 1.00e-160 499
Msa1452140 AT2G22610.1 45.750 400 190 7 381 770 405 787 1.32e-99 338
Msa1452140 AT2G22610.3 45.750 400 190 7 381 770 406 788 1.37e-99 338
Msa1452140 AT2G22610.2 45.750 400 190 7 381 770 405 787 1.43e-99 338
Msa1452140 AT5G27550.2 45.910 379 183 4 379 750 118 481 1.19e-98 328
Msa1452140 AT5G27550.1 45.910 379 183 4 379 750 118 481 1.19e-98 328
Msa1452140 AT1G72250.2 44.988 409 194 7 378 772 485 876 2.18e-98 337
Msa1452140 AT1G72250.1 44.988 409 194 7 378 772 476 867 2.95e-98 337
Msa1452140 AT1G72250.4 44.988 409 194 7 378 772 496 887 3.33e-98 337
Msa1452140 AT1G72250.3 44.988 409 194 7 378 772 497 888 3.54e-98 337
Msa1452140 AT5G54670.3 45.109 368 173 8 381 731 324 679 2.84e-91 306
Msa1452140 AT4G27180.1 46.092 371 163 8 381 730 375 729 2.98e-91 308
Msa1452140 AT4G27180.2 46.092 371 163 8 381 730 375 729 2.98e-91 308
Msa1452140 AT5G54670.1 45.109 368 173 8 381 731 384 739 1.20e-90 306
Msa1452140 AT5G54670.2 45.109 368 173 8 381 731 384 739 1.20e-90 306
Msa1452140 AT4G05190.2 41.895 401 198 8 355 731 373 762 1.38e-84 290
Msa1452140 AT4G05190.1 41.895 401 198 8 355 731 386 775 2.07e-84 290
Msa1452140 AT4G21270.1 43.236 377 171 9 381 731 419 778 1.12e-81 283
Msa1452140 AT1G55550.1 36.092 435 238 7 381 791 79 497 2.80e-75 266
Msa1452140 AT5G65930.2 41.449 345 191 4 381 725 876 1209 3.61e-74 268
Msa1452140 AT5G65930.1 41.449 345 191 4 381 725 875 1208 3.87e-74 268
Msa1452140 AT5G65930.3 41.449 345 191 4 381 725 882 1215 4.39e-74 267
Msa1452140 AT5G27950.1 41.989 362 180 10 377 726 62 405 9.09e-67 236
Msa1452140 AT3G17360.3 36.543 457 241 17 442 876 210 639 1.05e-61 231
Msa1452140 AT3G17360.1 36.543 457 241 17 442 876 210 639 1.17e-61 231
Msa1452140 AT3G17360.2 36.245 458 249 16 442 876 210 647 1.29e-61 230
Msa1452140 AT3G44050.1 38.482 382 203 11 398 758 93 463 3.04e-58 219
Msa1452140 AT3G19050.1 42.724 323 161 10 442 746 235 551 5.44e-58 219
Msa1452140 AT2G36200.1 36.154 390 216 12 398 759 12 396 1.78e-55 209
Msa1452140 AT2G36200.2 36.154 390 216 12 398 759 12 396 2.38e-55 209
Msa1452140 AT2G37420.1 40.514 311 157 8 435 725 88 390 2.50e-55 209
Msa1452140 AT2G37420.2 40.514 311 157 8 435 725 88 390 2.50e-55 209
Msa1452140 AT3G23670.2 36.908 401 212 10 381 755 76 461 2.86e-55 208
Msa1452140 AT3G63480.2 39.236 288 164 4 441 721 47 330 3.73e-55 199
Msa1452140 AT3G23670.1 36.908 401 212 10 381 755 76 461 4.22e-55 209
Msa1452140 AT5G65460.6 33.827 405 223 12 376 759 121 501 6.83e-55 208
Msa1452140 AT5G65460.2 33.827 405 223 12 376 759 121 501 8.04e-55 208
Msa1452140 AT5G65460.1 33.827 405 223 12 376 759 121 501 1.17e-54 208
Msa1452140 AT5G65460.4 33.827 405 223 12 376 759 121 501 1.30e-54 207
Msa1452140 AT3G63480.1 39.726 292 161 6 441 721 47 334 1.91e-54 197
Msa1452140 AT5G65460.3 33.824 408 226 12 376 759 121 508 4.65e-54 206
Msa1452140 AT4G14150.1 35.930 398 216 10 381 755 75 456 2.17e-53 204
Msa1452140 AT1G59540.1 36.438 365 209 11 399 753 4 355 2.19e-53 201
Msa1452140 AT5G47820.2 33.085 402 220 11 398 758 11 404 2.33e-53 203
Msa1452140 AT5G47820.1 33.085 402 220 11 398 758 11 404 2.33e-53 203
Msa1452140 AT2G28620.1 35.476 389 215 12 398 759 50 429 6.22e-53 202
Msa1452140 AT2G28620.3 35.476 389 215 12 398 759 50 429 6.27e-53 202
Msa1452140 AT2G28620.2 35.476 389 215 12 398 759 50 429 6.27e-53 202
Msa1452140 AT4G24170.1 36.043 369 203 10 399 753 7 356 9.66e-52 198
Msa1452140 AT4G24170.2 36.043 369 203 10 399 753 7 356 9.66e-52 198
Msa1452140 AT5G60930.1 29.094 574 325 16 396 931 4 533 2.80e-51 197
Msa1452140 AT5G60930.2 29.094 574 325 16 396 931 4 533 4.25e-51 197
Msa1452140 AT5G60930.3 29.094 574 325 16 396 931 4 533 6.73e-51 196
Msa1452140 AT1G12430.1 38.535 314 164 6 434 726 108 413 1.43e-50 194
Msa1452140 AT1G12430.2 38.535 314 164 6 434 726 108 413 1.46e-50 194
Msa1452140 AT3G50240.2 33.333 393 217 12 399 754 26 410 1.47e-50 194
Msa1452140 AT4G38950.3 35.641 390 221 11 399 778 14 383 1.55e-50 193
Msa1452140 AT4G38950.5 35.641 390 221 11 399 778 14 383 1.55e-50 193
Msa1452140 AT4G38950.4 35.641 390 221 11 399 778 14 383 1.55e-50 193
Msa1452140 AT4G38950.1 35.641 390 221 11 399 778 14 383 1.55e-50 193
Msa1452140 AT4G38950.2 35.641 390 221 11 399 778 14 383 1.55e-50 193
Msa1452140 AT3G50240.1 33.333 393 217 12 399 754 26 410 1.99e-50 194
Msa1452140 AT3G50240.4 33.333 393 217 12 399 754 26 410 2.05e-50 194
Msa1452140 AT5G10470.2 35.057 348 204 8 376 721 125 452 6.03e-50 193
Msa1452140 AT5G10470.1 35.057 348 204 8 376 721 125 452 6.18e-50 193
Msa1452140 AT3G49650.1 33.333 339 206 5 434 760 58 388 6.58e-50 191
Msa1452140 AT1G18550.1 36.795 337 187 8 440 760 202 528 1.33e-49 189
Msa1452140 AT1G01950.3 35.655 359 196 10 393 726 55 403 1.42e-49 191
Msa1452140 AT1G01950.1 35.655 359 196 10 393 726 55 403 1.56e-49 190
Msa1452140 AT1G01950.2 35.655 359 196 10 393 726 55 403 1.61e-49 190
Msa1452140 AT3G45850.2 34.896 384 222 13 399 759 56 434 3.09e-49 190
Msa1452140 AT3G45850.1 34.896 384 222 13 399 759 56 434 3.09e-49 190
Msa1452140 AT1G18370.1 39.815 324 163 12 441 751 77 381 7.51e-49 189
Msa1452140 AT2G21300.2 35.422 367 210 10 399 753 25 376 2.17e-48 186
Msa1452140 AT2G21300.4 35.422 367 210 10 399 753 25 376 2.17e-48 186
Msa1452140 AT2G21300.3 35.422 367 210 10 399 753 25 376 2.17e-48 186
Msa1452140 AT2G21300.1 35.422 367 210 10 399 753 25 376 2.17e-48 186
Msa1452140 AT2G21300.5 35.422 367 210 10 399 753 25 376 2.17e-48 186
Msa1452140 AT3G43210.3 37.368 380 205 14 392 757 22 382 7.43e-48 185
Msa1452140 AT3G43210.5 37.368 380 205 14 392 757 22 382 7.43e-48 185
Msa1452140 AT3G43210.2 37.368 380 205 14 392 757 22 382 7.43e-48 185
Msa1452140 AT3G43210.4 37.368 380 205 14 392 757 22 382 7.43e-48 185
Msa1452140 AT3G43210.1 37.368 380 205 14 392 757 22 382 7.43e-48 185
Msa1452140 AT3G54870.3 35.484 310 172 7 434 725 142 441 8.80e-48 185
Msa1452140 AT3G54870.1 35.484 310 172 7 434 725 142 441 8.92e-48 185
Msa1452140 AT3G54870.2 35.484 310 172 7 434 725 142 441 1.31e-47 185
Msa1452140 AT5G66310.2 36.646 322 180 9 441 753 66 372 3.57e-47 184
Msa1452140 AT5G66310.3 36.646 322 180 9 441 753 66 372 3.57e-47 184
Msa1452140 AT5G66310.1 36.646 322 180 9 441 753 66 372 3.57e-47 184
Msa1452140 AT3G51150.2 36.533 323 181 8 441 754 65 372 6.17e-47 183
Msa1452140 AT3G51150.4 36.533 323 181 8 441 754 65 372 6.17e-47 183
Msa1452140 AT3G51150.3 36.533 323 181 8 441 754 65 372 6.17e-47 183
Msa1452140 AT3G51150.1 36.533 323 181 8 441 754 65 372 6.88e-47 183
Msa1452140 AT3G10180.2 36.729 373 199 12 399 753 4 357 2.95e-46 181
Msa1452140 AT3G10180.1 36.729 373 199 12 399 753 4 357 3.53e-46 181
Msa1452140 AT4G39050.1 37.500 320 181 10 441 753 138 445 4.14e-45 177
Msa1452140 AT2G21380.2 36.562 320 184 10 441 753 144 451 4.35e-45 177
Msa1452140 AT2G21380.1 36.562 320 184 10 441 753 144 451 4.35e-45 177
Msa1452140 AT1G21730.1 35.185 378 216 12 394 759 71 431 1.24e-44 175
Msa1452140 AT5G06670.8 35.976 328 184 9 441 753 106 422 4.02e-44 172
Msa1452140 AT5G06670.4 35.976 328 184 9 441 753 106 422 4.02e-44 172
Msa1452140 AT5G06670.7 35.976 328 184 9 441 753 106 422 4.02e-44 172
Msa1452140 AT5G06670.5 35.976 328 184 9 441 753 106 422 4.56e-44 172
Msa1452140 AT5G06670.2 35.976 328 184 9 441 753 106 422 2.10e-43 171
Msa1452140 AT5G06670.3 35.976 328 184 9 441 753 106 422 2.10e-43 171
Msa1452140 AT5G06670.6 35.312 337 183 10 441 753 106 431 7.36e-42 167
Msa1452140 AT5G06670.1 35.312 337 183 10 441 753 106 431 7.36e-42 167
Msa1452140 AT3G50240.3 36.246 309 159 10 481 754 3 308 3.99e-41 164
Msa1452140 AT1G01950.4 38.889 270 137 6 477 726 1 262 4.32e-41 163
Msa1452140 AT3G12020.4 36.000 325 182 10 441 750 109 422 1.38e-40 162
Msa1452140 AT3G12020.1 36.000 325 182 10 441 750 109 422 1.38e-40 162
Msa1452140 AT3G12020.3 36.000 325 182 10 441 750 109 422 1.63e-40 162
Msa1452140 AT3G12020.2 36.000 325 182 10 441 750 109 422 1.63e-40 162
Msa1452140 AT1G59540.2 37.363 273 152 9 490 753 1 263 6.32e-38 153
Msa1452140 AT3G20150.2 34.091 352 195 13 440 764 134 475 2.56e-37 152
Msa1452140 AT3G20150.1 34.091 352 195 13 440 764 134 475 2.75e-37 152
Msa1452140 AT5G27950.2 39.669 242 128 6 497 726 4 239 2.89e-36 144
Msa1452140 AT3G16060.1 29.570 372 221 9 375 730 151 497 5.23e-35 143
Msa1452140 AT3G16630.2 29.972 357 212 10 391 725 186 526 4.68e-34 141
Msa1452140 AT3G16630.1 29.972 357 212 10 391 725 186 526 4.68e-34 141
Msa1452140 AT5G02370.1 31.579 342 191 9 398 721 20 336 2.51e-33 137
Msa1452140 AT5G42490.2 34.828 290 154 10 391 668 6 272 3.48e-32 136
Msa1452140 AT5G42490.1 34.828 290 154 10 391 668 6 272 3.68e-32 136
Msa1452140 AT4G14330.1 32.362 309 182 9 438 735 85 377 6.92e-32 134
Msa1452140 AT3G51150.5 38.916 203 116 4 560 754 17 219 2.89e-27 120
Msa1452140 AT5G65460.5 33.984 256 137 7 523 759 13 255 1.31e-26 118
Msa1452140 AT5G23910.2 26.471 306 200 9 427 731 44 325 1.63e-19 94.7
Msa1452140 AT5G23910.1 26.471 306 200 9 427 731 40 321 1.69e-19 94.7

Find 250 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTCACTATAGGATTTA+AGG 0.095452 tig0033693:+8665 None:intergenic
TGAAAATGTTAGAAACTTTC+TGG 0.118054 tig0033693:-8951 Msa1452140:CDS
AGCAAAGTATTTACCTAAAT+TGG 0.136829 tig0033693:+7191 None:intergenic
TTGTTTAATCAGGAAGTATT+AGG 0.173618 tig0033693:-6886 Msa1452140:intron
GCAGTCTAGTTCTCATTCTT+TGG 0.179747 tig0033693:-8372 Msa1452140:intron
TATTTAACATTAGAGCTTTC+AGG 0.197880 tig0033693:-3699 Msa1452140:three_prime_UTR
GGCTTAGCTCATGCTGCTTC+TGG 0.218020 tig0033693:-7056 Msa1452140:CDS
TTCAACTTCAACAAAGTCTT+TGG 0.227045 tig0033693:-6740 Msa1452140:CDS
ATCGGCTGCTACGGTCATTA+AGG 0.248332 tig0033693:+5900 None:intergenic
CACGAGGAGTTCTCCAATTT+AGG 0.260528 tig0033693:-7204 Msa1452140:intron
AACAAATCTCTTTCAGCTTT+GGG 0.274588 tig0033693:-5626 Msa1452140:CDS
TGTTGTATTTACACAGATAA+TGG 0.279167 tig0033693:-3764 Msa1452140:three_prime_UTR
CGAGTAAGACCTTTCTTATC+TGG 0.281087 tig0033693:-6854 Msa1452140:CDS
ACTGGAGCTGGTTGCCTTGT+TGG 0.285741 tig0033693:+3986 None:intergenic
GCTAATGGTGTATGGAAATT+TGG 0.292995 tig0033693:-8631 Msa1452140:CDS
CAGTCTAGTTCTCATTCTTT+GGG 0.293355 tig0033693:-8371 Msa1452140:CDS
AATTTAGAACATTCTATATC+TGG 0.297913 tig0033693:-5107 Msa1452140:CDS
TAACAAATCTCTTTCAGCTT+TGG 0.302511 tig0033693:-5627 Msa1452140:CDS
CAATGAAGTCCAGGATCTTA+AGG 0.313316 tig0033693:-6997 Msa1452140:CDS
CTTAAGGGTAATAAGATTAC+TGG 0.318043 tig0033693:-6981 Msa1452140:intron
CTTGACAAAGAATTGGTAAA+TGG 0.318695 tig0033693:+8553 None:intergenic
GGCAACCAGTTTAACATTGC+TGG 0.319385 tig0033693:-4501 Msa1452140:CDS
TGATGTCGAGTCTAATAAAA+TGG 0.321854 tig0033693:-8488 Msa1452140:intron
CGCCCTTTCCCATTCTTTGA+GGG 0.330150 tig0033693:+6770 None:intergenic
AAAGCCAAGGTGTAAATTAC+AGG 0.341060 tig0033693:-6320 Msa1452140:CDS
AGGTAGGAATTCCAATTTCC+TGG 0.342578 tig0033693:+8921 None:intergenic
CCAGTTTAACATTGCTGGTT+CGG 0.343097 tig0033693:-4496 Msa1452140:CDS
CCATTTGTTTGTTTCCTTGA+AGG 0.345907 tig0033693:+4025 None:intergenic
GCCTCTCATGAACATATTAT+AGG 0.347422 tig0033693:+4521 None:intergenic
CATCAGAACATGACTTGCTT+TGG 0.348531 tig0033693:-4437 Msa1452140:CDS
GGGTGTTGGGAAGCAGATAA+TGG 0.350245 tig0033693:-4609 Msa1452140:CDS
TATAGTGAATGGAAACAAAC+TGG 0.351051 tig0033693:-8655 Msa1452140:CDS
CTTACCGTAGGAACTTCTTC+TGG 0.354763 tig0033693:+8314 None:intergenic
CCATTCACTATAGGATTTAA+GGG 0.356112 tig0033693:+8666 None:intergenic
TTGAGTTCTTTGTCTCGATA+TGG 0.357001 tig0033693:+4794 None:intergenic
AAAGACTTTGTTGAAGTTGA+AGG 0.358638 tig0033693:+6742 None:intergenic
GACATCTGGAGCTGTCTTAC+GGG 0.363400 tig0033693:-5738 Msa1452140:CDS
CAACTCCTTCCCACATGCTT+CGG 0.364129 tig0033693:+9883 None:intergenic
CTGCCCCATCCTTGTTGACT+CGG 0.365037 tig0033693:+5286 None:intergenic
AAACTTTCTGGTGGCTATCC+AGG 0.365478 tig0033693:-8939 Msa1452140:CDS
AAAACTTACCAAGTGAATCT+TGG 0.366053 tig0033693:+5531 None:intergenic
TGTTTAATCAGGAAGTATTA+GGG 0.366153 tig0033693:-6885 Msa1452140:intron
CTGATATGCAGCCACTTGTT+AGG 0.366564 tig0033693:-6605 Msa1452140:CDS
CTGGTGGCTATCCAGGAAAT+TGG 0.366578 tig0033693:-8932 Msa1452140:CDS
GTTGACATGAAACGTAAAAC+TGG 0.370072 tig0033693:-3965 Msa1452140:CDS
AGGAACAAACAAATAATAAA+AGG 0.370114 tig0033693:+3884 None:intergenic
AGTTTGTTTCCATTCACTAT+AGG 0.370258 tig0033693:+8657 None:intergenic
TCGTCTTAAAGATCTTGATT+TGG 0.370539 tig0033693:-9419 Msa1452140:CDS
TTCTCCAACAGCATTGGCCT+CGG 0.372109 tig0033693:+5365 None:intergenic
ACTATCTCTCTTTGTTGCTT+CGG 0.379839 tig0033693:+9853 None:intergenic
GATTGATGTTGGCAACTTAG+AGG 0.384355 tig0033693:-4979 Msa1452140:intron
TTCTTGCCAATGCTGCCTTA+AGG 0.390471 tig0033693:+5138 None:intergenic
CTACTGCTCCTTCACCTTCA+AGG 0.390953 tig0033693:-4039 Msa1452140:CDS
TGTTCTTAACAAGGTTCATC+CGG 0.391884 tig0033693:-9141 Msa1452140:CDS
CCGAACCAGCAATGTTAAAC+TGG 0.392287 tig0033693:+4496 None:intergenic
GCGCCCTTTCCCATTCTTTG+AGG 0.394470 tig0033693:+6769 None:intergenic
TGAGCAAGTCAGAGATCTAT+TGG 0.396757 tig0033693:-6211 Msa1452140:CDS
CATTCTATATCTGGAAGCTC+TGG 0.416237 tig0033693:-5098 Msa1452140:CDS
TCCACGGTACTCGAATGATT+TGG 0.419332 tig0033693:+6827 None:intergenic
TGCTTGACTGTACATGTTCA+AGG 0.421405 tig0033693:-5770 Msa1452140:CDS
AAATACTGAAAAGCAGATAA+TGG 0.421522 tig0033693:+8974 None:intergenic
AGCCTTCTGAGGAAGAGTTT+AGG 0.424022 tig0033693:-9196 Msa1452140:CDS
GCTTACGGCCAAACAGGATC+AGG 0.424727 tig0033693:-6549 Msa1452140:CDS
CATGAACTGCATACCAGCTT+TGG 0.425873 tig0033693:+7239 None:intergenic
ATTAATGTTCCCTCAAAGAA+TGG 0.427785 tig0033693:-6779 Msa1452140:CDS
GCAGATAATGGCGCTCCATC+GGG 0.427834 tig0033693:+8986 None:intergenic
ACAGTTGGTTGAATCTGTTT+TGG 0.428273 tig0033693:-7863 Msa1452140:intron
AGAGGTCCTTGACAAAGAAT+TGG 0.435919 tig0033693:+8546 None:intergenic
GTTTCAGATTGCCAGCCTTA+AGG 0.436181 tig0033693:-5153 Msa1452140:intron
TGGTAACATGTTAGGGTGTT+GGG 0.437816 tig0033693:-4622 Msa1452140:CDS
GTGAGTTTGCTATTTCTGTA+AGG 0.441257 tig0033693:+5563 None:intergenic
AATGAAGTCCAGGATCTTAA+GGG 0.442261 tig0033693:-6996 Msa1452140:CDS
CAAGGAAGAGACTTGACATC+TGG 0.442958 tig0033693:-5752 Msa1452140:CDS
GAAGCAACAAAGAGAGATAG+TGG 0.446472 tig0033693:-9851 Msa1452140:five_prime_UTR
CCCTTAAATCCTATAGTGAA+TGG 0.447079 tig0033693:-8666 Msa1452140:CDS
TGACATCTGGAGCTGTCTTA+CGG 0.447398 tig0033693:-5739 Msa1452140:CDS
ATATTTGCTTACGGCCAAAC+AGG 0.449662 tig0033693:-6555 Msa1452140:CDS
TCTCCAACAGCATTGGCCTC+GGG 0.454242 tig0033693:+5366 None:intergenic
ACCCTTTGATTCATGTCCGT+TGG 0.457390 tig0033693:+4383 None:intergenic
AACAAGACTGGTAACATGTT+AGG 0.459081 tig0033693:-4630 Msa1452140:CDS
CGTCAAAGAGCTCAAAGAAC+AGG 0.459647 tig0033693:-5262 Msa1452140:intron
CATTACAAGCCAAGATGAAC+TGG 0.460521 tig0033693:-7812 Msa1452140:intron
AGCAGATAATGGCGCTCCAT+CGG 0.461774 tig0033693:+8985 None:intergenic
TCTTATTACCCTTAAGATCC+TGG 0.463135 tig0033693:+6988 None:intergenic
GCCCGCTGGCTTGCATGATA+AGG 0.463420 tig0033693:+5044 None:intergenic
AATTGGAATTCCTACCTTTG+AGG 0.464052 tig0033693:-8915 Msa1452140:CDS
TGGAAACAAACTGGGGCTAA+TGG 0.464682 tig0033693:-8646 Msa1452140:CDS
TCGGCTGCTACGGTCATTAA+GGG 0.465945 tig0033693:+5901 None:intergenic
TCATGCCATGTACAAGCAAC+GGG 0.466768 tig0033693:+3731 None:intergenic
AAATTTATGTCTTATATCCC+TGG 0.467256 tig0033693:-3625 None:intergenic
TACAGGAGAGTGGGTTGATA+AGG 0.467459 tig0033693:-4676 Msa1452140:CDS
CTGGTAACATGTTAGGGTGT+TGG 0.468558 tig0033693:-4623 Msa1452140:CDS
CGTTTCATGTCAACTGGAGC+TGG 0.468835 tig0033693:+3974 None:intergenic
TTAGGCTTGGTTTGAGAAGT+GGG 0.471557 tig0033693:-9178 Msa1452140:CDS
GGATCGTTCTGAGTATACTT+TGG 0.472506 tig0033693:+4542 None:intergenic
GGTGTTGGGAAGCAGATAAT+GGG 0.474927 tig0033693:-4608 Msa1452140:CDS
CCAGCGGGCTGCAGATATCA+TGG 0.475683 tig0033693:-5030 Msa1452140:CDS
TCTTCCTCAGAAGGCTCTGC+TGG 0.476392 tig0033693:+9203 None:intergenic
TGCCAATGCTGCCTTAAGGC+TGG 0.477104 tig0033693:+5142 None:intergenic
TGCCAGCCTTAAGGCAGCAT+TGG 0.477178 tig0033693:-5144 Msa1452140:CDS
GTTTGGAACATAGTGGGGTT+CGG 0.478080 tig0033693:-9908 Msa1452140:five_prime_UTR
TTTATAGGCATGCACATTCA+CGG 0.478168 tig0033693:-7077 Msa1452140:intron
GAACTGCATACCAGCTTTGG+TGG 0.479749 tig0033693:+7242 None:intergenic
TCTGAGGAAGAGTTTAGGCT+TGG 0.480056 tig0033693:-9191 Msa1452140:CDS
AGAGTGGGTTGATAAGGTTA+TGG 0.481612 tig0033693:-4670 Msa1452140:CDS
GTGAACAAACATTAGTGTCT+TGG 0.482148 tig0033693:+5395 None:intergenic
GATATCATGGATGATCCCTT+TGG 0.484586 tig0033693:-5017 Msa1452140:CDS
TAAGGCAGCATTGGCAAGAA+AGG 0.485960 tig0033693:-5135 Msa1452140:CDS
CACTGGTTGCCGGCATCCAA+AGG 0.486861 tig0033693:+5001 None:intergenic
AGTATCATACCAGTTCATCT+TGG 0.487526 tig0033693:+7803 None:intergenic
AGGAAACCGGTACAGGAGAG+TGG 0.489309 tig0033693:-4686 Msa1452140:CDS
ACCTGTGAGATCGGCTGCTA+CGG 0.491250 tig0033693:+5891 None:intergenic
AAACTGGGGCTAATGGTGTA+TGG 0.492107 tig0033693:-8639 Msa1452140:CDS
CAACATCAATCACTGGTTGC+CGG 0.493007 tig0033693:+4991 None:intergenic
GGGATTAGTGCAGAATCAAC+AGG 0.493427 tig0033693:+9007 None:intergenic
TGTTATTGAACTAATGAACT+TGG 0.493700 tig0033693:-5954 Msa1452140:CDS
TTAAGAAGATATGAAGCAGC+AGG 0.495720 tig0033693:-9269 Msa1452140:CDS
AATGTTTGCATATTTGCTTA+CGG 0.497791 tig0033693:-6564 Msa1452140:CDS
GTATGAAAGAGGATGATGTT+TGG 0.499520 tig0033693:-9925 None:intergenic
AAGAGAGATAGTGGGAGGAG+AGG 0.499752 tig0033693:-9842 Msa1452140:five_prime_UTR
CTTGTTAGGTCTGTGCTCGA+TGG 0.501110 tig0033693:-6591 Msa1452140:CDS
TGCCCCATCCTTGTTGACTC+GGG 0.501518 tig0033693:+5287 None:intergenic
ACTTGAACAAGGCTTGCATC+TGG 0.501874 tig0033693:+5992 None:intergenic
TGGATGATCCCTTTGGATGC+CGG 0.503861 tig0033693:-5010 Msa1452140:CDS
TATTTCTGTAAGGGACATGT+TGG 0.504849 tig0033693:+5573 None:intergenic
GCTGCCCGAGTCAACAAGGA+TGG 0.505773 tig0033693:-5291 Msa1452140:CDS
AATTGTTTCTCCAACAGCAT+TGG 0.507069 tig0033693:+5359 None:intergenic
AAGGATTGTGAGTAGTGTAT+TGG 0.507645 tig0033693:-8689 Msa1452140:CDS
TTTAGGCTTGGTTTGAGAAG+TGG 0.507792 tig0033693:-9179 Msa1452140:CDS
ATGCATCTCGTTGACTTGGC+AGG 0.508762 tig0033693:-5710 Msa1452140:CDS
AAATTGTGTGGAAGACGATA+AGG 0.509546 tig0033693:-4706 Msa1452140:CDS
TTAATGTTCCCTCAAAGAAT+GGG 0.510130 tig0033693:-6778 Msa1452140:CDS
GATGATGTTTGGAACATAGT+GGG 0.512689 tig0033693:-9914 Msa1452140:five_prime_UTR
CCTTCAAGGAAACAAACAAA+TGG 0.513212 tig0033693:-4025 Msa1452140:CDS
TTCAGTGGCATCTGTTGTTG+AGG 0.514852 tig0033693:-9464 Msa1452140:CDS
TAATGCCCGTTGCTTGTACA+TGG 0.516093 tig0033693:-3736 Msa1452140:three_prime_UTR
CCATGATATCTGCAGCCCGC+TGG 0.516277 tig0033693:+5030 None:intergenic
TTATACAGCGAATCAAAGAA+AGG 0.518620 tig0033693:-6280 Msa1452140:CDS
TCCTATGGTAACAAAGAAAG+AGG 0.521036 tig0033693:-7472 Msa1452140:CDS
ATCAACCCACTCTCCTGTAC+CGG 0.523615 tig0033693:+4680 None:intergenic
GGATGATGTTTGGAACATAG+TGG 0.524459 tig0033693:-9915 Msa1452140:five_prime_UTR
TGGGATAACTTCAGGAGGAC+AGG 0.526345 tig0033693:-5418 Msa1452140:intron
CTGCCCGAGTCAACAAGGAT+GGG 0.526826 tig0033693:-5290 Msa1452140:CDS
CGAAGCATGTGGGAAGGAGT+TGG 0.528965 tig0033693:-9882 Msa1452140:five_prime_UTR
GTTTGTTTCCTTGAAGGTGA+AGG 0.529317 tig0033693:+4031 None:intergenic
ACAAGACTGGTAACATGTTA+GGG 0.529408 tig0033693:-4629 Msa1452140:CDS
AGGATATACACCTGTGAGAT+CGG 0.531914 tig0033693:+5882 None:intergenic
GTCATGTTCTGATGAATCAC+TGG 0.532004 tig0033693:+4446 None:intergenic
TCCTCTTTCTTTGTTACCAT+AGG 0.533041 tig0033693:+7471 None:intergenic
ATGCATGCATCTCGTTGACT+TGG 0.535190 tig0033693:-5714 Msa1452140:CDS
ACAGTTCAAACCACCAAAGC+TGG 0.535967 tig0033693:-7252 Msa1452140:CDS
CTGGAAGCTCTGGAAAATGT+AGG 0.537051 tig0033693:-5088 Msa1452140:CDS
ACCTTATCATGCAAGCCAGC+GGG 0.537523 tig0033693:-5045 Msa1452140:CDS
TTCTAGATCAGATGCCTCAA+AGG 0.539627 tig0033693:+8901 None:intergenic
GTGGAAGACGATAAGGAAAC+CGG 0.539726 tig0033693:-4699 Msa1452140:CDS
TTTAGGGAGGAAAATCATCA+AGG 0.539794 tig0033693:-8708 Msa1452140:intron
CAATTACTCCAAGATTCACT+TGG 0.541197 tig0033693:-5539 Msa1452140:intron
GGGCTGTTGCTCCGACTGCA+CGG 0.542943 tig0033693:+5921 None:intergenic
CAGCTAAAAGCACAGAATTG+AGG 0.543524 tig0033693:-4341 Msa1452140:intron
AGAGATCTATTGGTTACTGA+TGG 0.546337 tig0033693:-6201 Msa1452140:CDS
AGTGAAATGTCTCAAAGAGA+TGG 0.547324 tig0033693:-7634 Msa1452140:CDS
CAAAGAATTGGTAAATGGCT+CGG 0.551364 tig0033693:+8558 None:intergenic
TTCCCTCAAAGAATGGGAAA+GGG 0.552087 tig0033693:-6772 Msa1452140:CDS
AGTCCCGAGGCCAATGCTGT+TGG 0.554966 tig0033693:-5369 Msa1452140:CDS
GTCATGCCATGTACAAGCAA+CGG 0.555428 tig0033693:+3730 None:intergenic
GGTGGATAACAAGATTCCTA+TGG 0.557286 tig0033693:-7487 Msa1452140:CDS
ACTGGTTGCCGGCATCCAAA+GGG 0.557291 tig0033693:+5002 None:intergenic
AAGTTAGATGTGAACAAGAC+TGG 0.557708 tig0033693:-4642 Msa1452140:CDS
TCTAGAAAATCAGAAGAAGC+TGG 0.560090 tig0033693:-9394 Msa1452140:intron
AGAGTTGCTACAGTTGAACT+TGG 0.560508 tig0033693:-5315 Msa1452140:CDS
GGTCGACAAATCTGAGGCGA+CGG 0.560580 tig0033693:-5678 Msa1452140:CDS
TGAGTTTGCTATTTCTGTAA+GGG 0.560724 tig0033693:+5564 None:intergenic
GTTCTTAACAAGGTTCATCC+GGG 0.561305 tig0033693:-9140 Msa1452140:CDS
GACGATAAGGAAACCGGTAC+AGG 0.562544 tig0033693:-4693 Msa1452140:CDS
GTTCCCTCAAAGAATGGGAA+AGG 0.565328 tig0033693:-6773 Msa1452140:CDS
GTCGACAAATCTGAGGCGAC+GGG 0.565704 tig0033693:-5677 Msa1452140:CDS
CATTTACCAATTCTTTGTCA+AGG 0.566014 tig0033693:-8552 Msa1452140:CDS
AAGTTGCCAACATCAATCAC+TGG 0.567692 tig0033693:+4984 None:intergenic
TTTGGTTGTCCAGATAAGAA+AGG 0.569317 tig0033693:+6845 None:intergenic
AGCCAACGGACATGAATCAA+AGG 0.569973 tig0033693:-4385 Msa1452140:CDS
GCAGCATTGGCAAGAAAGGA+AGG 0.570071 tig0033693:-5131 Msa1452140:CDS
TTTGGACCATCTGCAGCCCA+AGG 0.571127 tig0033693:-6722 Msa1452140:intron
ACCGTAGCAGCCGATCTCAC+AGG 0.572158 tig0033693:-5892 Msa1452140:intron
AACCAACCTTGGGCTGCAGA+TGG 0.574279 tig0033693:+6716 None:intergenic
TCTTTGTAATGTTCTTAACA+AGG 0.574812 tig0033693:-9150 Msa1452140:CDS
GAGCCCTGTAATTTACACCT+TGG 0.575443 tig0033693:+6316 None:intergenic
AGCAAATGCTCTTTGATCAA+CGG 0.575718 tig0033693:-7392 Msa1452140:CDS
GGGTTCGGAACCGAAGCATG+TGG 0.581338 tig0033693:-9893 Msa1452140:five_prime_UTR
TGCCCGAGTCAACAAGGATG+GGG 0.582451 tig0033693:-5289 Msa1452140:CDS
CAAACTATACAATGAAGTCC+AGG 0.588403 tig0033693:-7006 Msa1452140:CDS
AATGGTGTATGGAAATTTGG+TGG 0.588838 tig0033693:-8628 Msa1452140:CDS
GACGGGCGATAGATTGAAAG+AGG 0.592922 tig0033693:-5660 Msa1452140:CDS
CACCTTATCATGCAAGCCAG+CGG 0.593447 tig0033693:-5046 Msa1452140:CDS
TTGACTTGGCAGGAAGTGAG+AGG 0.593669 tig0033693:-5700 Msa1452140:CDS
GCCAACGGACATGAATCAAA+GGG 0.594270 tig0033693:-4384 Msa1452140:CDS
AGCCTAAACTCTTCCTCAGA+AGG 0.596157 tig0033693:+9194 None:intergenic
GTGACTCCTCGTCAGCAACA+TGG 0.598453 tig0033693:+7433 None:intergenic
TTTGAACAAGACTATTCACT+GGG 0.599721 tig0033693:+4727 None:intergenic
AGATCAGATGCCTCAAAGGT+AGG 0.602073 tig0033693:+8905 None:intergenic
GTAGGACAGCGGCTAGTGAA+CGG 0.606275 tig0033693:-5070 Msa1452140:CDS
TTCGTAGTAACTCTCAAAGA+GGG 0.606354 tig0033693:-6024 Msa1452140:CDS
ATAGTGAATGGAAACAAACT+GGG 0.606384 tig0033693:-8654 Msa1452140:CDS
GTCACCTTGGATACAGAACC+CGG 0.607742 tig0033693:+9122 None:intergenic
CGGCAACCAGTGATTGATGT+TGG 0.608755 tig0033693:-4990 Msa1452140:CDS
GAAGCCAGAAGAAGTTCCTA+CGG 0.609122 tig0033693:-8318 Msa1452140:intron
TCCTATAATATGTTCATGAG+AGG 0.612800 tig0033693:-4522 Msa1452140:CDS
AAATGTTAGAAACTTTCTGG+TGG 0.614047 tig0033693:-8948 Msa1452140:CDS
TTTATTAGACTCGACATCAG+AGG 0.616146 tig0033693:+8492 None:intergenic
AAGCCAAGGTGTAAATTACA+GGG 0.618780 tig0033693:-6319 Msa1452140:CDS
TGGTGCTGCCCGAGTCAACA+AGG 0.620113 tig0033693:-5295 Msa1452140:CDS
TTTACCAGCAGAGCCTTCTG+AGG 0.621122 tig0033693:-9207 Msa1452140:CDS
ACCGTGGAGAACATAGAAGA+TGG 0.621354 tig0033693:-6812 Msa1452140:CDS
GGAAACCGGTACAGGAGAGT+GGG 0.621777 tig0033693:-4685 Msa1452140:CDS
TCATCCGGGTTCTGTATCCA+AGG 0.624192 tig0033693:-9126 Msa1452140:intron
GGTCATAAGAACCGTGCAGT+CGG 0.625242 tig0033693:-5932 Msa1452140:CDS
GGTAGCAGCATCAACATCAT+CGG 0.626833 tig0033693:+4467 None:intergenic
GTTATTGAACTAATGAACTT+GGG 0.629233 tig0033693:-5953 Msa1452140:CDS
ATTCGTAGTAACTCTCAAAG+AGG 0.631495 tig0033693:-6025 Msa1452140:CDS
GATTCTGCACTAATCCCCGA+TGG 0.632933 tig0033693:-9001 Msa1452140:CDS
TAGTCTTGTTCAAAATTGTG+TGG 0.633315 tig0033693:-4718 Msa1452140:CDS
ACCATCTTCTATGTTCTCCA+CGG 0.634195 tig0033693:+6811 None:intergenic
GTTTGTTCACATTAGTCCCG+AGG 0.634780 tig0033693:-5382 Msa1452140:CDS
CGGAACCGAAGCATGTGGGA+AGG 0.635189 tig0033693:-9888 Msa1452140:five_prime_UTR
CATGCAAATGAAATTTCACG+AGG 0.647135 tig0033693:-7220 Msa1452140:CDS
TGAGAGGGTCGACAAATCTG+AGG 0.647349 tig0033693:-5684 Msa1452140:CDS
TTGTTGATGATACTTGAACA+AGG 0.647374 tig0033693:+5981 None:intergenic
TCGAGCACAGACCTAACAAG+TGG 0.649204 tig0033693:+6594 None:intergenic
AAGCAACAAAGAGAGATAGT+GGG 0.649294 tig0033693:-9850 Msa1452140:five_prime_UTR
GTGTACAGAGCAAAAGCCAA+AGG 0.650308 tig0033693:-9767 Msa1452140:intron
ACATCTGGAGCTGTCTTACG+GGG 0.650405 tig0033693:-5737 Msa1452140:CDS
TTGACATGAAACGTAAAACT+GGG 0.651208 tig0033693:-3964 Msa1452140:CDS
TGAACAAGACTATTCACTGG+GGG 0.651920 tig0033693:+4729 None:intergenic
GAGGATGTTCTTCAACAGCA+TGG 0.652965 tig0033693:-9445 Msa1452140:CDS
CAACAAAGAGAGATAGTGGG+AGG 0.654842 tig0033693:-9847 Msa1452140:five_prime_UTR
ATGATGTTTGGAACATAGTG+GGG 0.657605 tig0033693:-9913 Msa1452140:five_prime_UTR
ACGGACATGAATCAAAGGGT+AGG 0.658106 tig0033693:-4380 Msa1452140:CDS
TGACTTGGCAGGAAGTGAGA+GGG 0.658596 tig0033693:-5699 Msa1452140:CDS
AGATAATGGGAACTTATCTG+AGG 0.660079 tig0033693:-4595 Msa1452140:CDS
CAGATAATGGCGCTCCATCG+GGG 0.660924 tig0033693:+8987 None:intergenic
AAAGTTACAAGCGTAGCCAA+CGG 0.665101 tig0033693:-4399 Msa1452140:CDS
CTCTGGAAAATGTAGGACAG+CGG 0.675648 tig0033693:-5081 Msa1452140:CDS
GGTTCGGAACCGAAGCATGT+GGG 0.676772 tig0033693:-9892 Msa1452140:five_prime_UTR
ACCAAATCATTCGAGTACCG+TGG 0.683949 tig0033693:-6828 Msa1452140:CDS
TAAGAAGATATGAAGCAGCA+GGG 0.688225 tig0033693:-9268 Msa1452140:CDS
TCGCACATCGAACACCAACA+AGG 0.688670 tig0033693:-4000 Msa1452140:CDS
CATTAACAAATTCACCACCC+TGG 0.700253 tig0033693:-4752 Msa1452140:CDS
TAGTGAATGGAAACAAACTG+GGG 0.713604 tig0033693:-8653 Msa1452140:CDS
GAAGATATGAAGCAGCAGGG+TGG 0.738522 tig0033693:-9265 Msa1452140:CDS
TTGCTGACGAGGAGTCACAG+AGG 0.755516 tig0033693:-7428 Msa1452140:CDS
TTGAACAAGACTATTCACTG+GGG 0.770387 tig0033693:+4728 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAAAATGATATCTTA+TGG - tig0033693:8638-8657 Msa1452140:CDS 10.0%
!!! ATTTACTATGAATGATTTTT+TGG - tig0033693:4463-4482 Msa1452140:CDS 15.0%
!!! TAAATTCTGTATTTTCTTTA+AGG - tig0033693:4506-4525 Msa1452140:CDS 15.0%
!!! TATAATTGATTCATGTTTTT+AGG - tig0033693:4822-4841 Msa1452140:intron 15.0%
!!! ATAATTGATTCATGTTTTTA+GGG - tig0033693:4823-4842 Msa1452140:intron 15.0%
!! TTTATGCCAATATAATATTA+AGG - tig0033693:6632-6651 Msa1452140:intron 15.0%
!! AGTTAACCTTAATATTATAT+TGG + tig0033693:6641-6660 None:intergenic 15.0%
!!! ATTTTAATGTAACAACTAAA+AGG + tig0033693:7388-7407 None:intergenic 15.0%
!! TGACTTCTTTAATATTTATT+TGG - tig0033693:7750-7769 Msa1452140:intron 15.0%
!!! GATATCATTTTTTAAAATCA+GGG + tig0033693:8635-8654 None:intergenic 15.0%
!!! AGATATCATTTTTTAAAATC+AGG + tig0033693:8636-8655 None:intergenic 15.0%
!!! TATCTTATGGAAATTTTATT+TGG - tig0033693:8651-8670 Msa1452140:CDS 15.0%
!! TATTTCTTATTGATATCTTA+TGG - tig0033693:8695-8714 Msa1452140:CDS 15.0%
!!! ATTTTCATGTGAAATGTAAA+AGG - tig0033693:4215-4234 Msa1452140:intron 20.0%
!! TTTGAGTATAAAATGTATCA+TGG - tig0033693:4711-4730 Msa1452140:CDS 20.0%
!! ATTATCTGATGTTGTATTAT+TGG + tig0033693:4749-4768 None:intergenic 20.0%
!! ATAATACAACATCAGATAAT+TGG - tig0033693:4749-4768 Msa1452140:CDS 20.0%
!! TAATACAACATCAGATAATT+GGG - tig0033693:4750-4769 Msa1452140:CDS 20.0%
!! GGTTTAAGAGTTTAATTAAA+CGG + tig0033693:5349-5368 None:intergenic 20.0%
!! ATTATTGTGCATCTAAAAAT+TGG - tig0033693:5426-5445 Msa1452140:intron 20.0%
!! AAATAACACTTAATAGCTAA+TGG + tig0033693:5788-5807 None:intergenic 20.0%
!! CTAAGAATTGAGTAAAATAA+TGG + tig0033693:5815-5834 None:intergenic 20.0%
!!! CATTATTTTACTCAATTCTT+AGG - tig0033693:5813-5832 Msa1452140:intron 20.0%
!!! TTTCTATTCGTGATTTTTTA+AGG - tig0033693:6607-6626 Msa1452140:CDS 20.0%
!! AATTGTCATCAAAATATTCA+AGG + tig0033693:7155-7174 None:intergenic 20.0%
!!! TGATATTTGTTTCTAAATAC+TGG - tig0033693:7435-7454 Msa1452140:CDS 20.0%
!!! AATTTAGAACATTCTATATC+TGG - tig0033693:8440-8459 Msa1452140:intron 20.0%
!!! ATCTTATGGATATTTTAAAC+TGG - tig0033693:8709-8728 Msa1452140:intron 20.0%
!!! TTCTTGTTAAGCATTTTAAA+AGG - tig0033693:9627-9646 Msa1452140:intron 20.0%
!!! TCTTGTTAAGCATTTTAAAA+GGG - tig0033693:9628-9647 Msa1452140:intron 20.0%
!! AGGAACAAACAAATAATAAA+AGG + tig0033693:9666-9685 None:intergenic 20.0%
!!! AACCATATATATTTTTTTGC+TGG - tig0033693:9733-9752 Msa1452140:intron 20.0%
!!! ACCATATATATTTTTTTGCT+GGG - tig0033693:9734-9753 Msa1452140:intron 20.0%
! AAGCAGATACAAAAAGAAAA+AGG - tig0033693:3739-3758 Msa1452140:three_prime_UTR 25.0%
! ATACAAAAAGAAAAAGGAAG+AGG - tig0033693:3745-3764 Msa1452140:three_prime_UTR 25.0%
! ATGTTATGTTATGTTACCTT+TGG + tig0033693:3799-3818 None:intergenic 25.0%
!! CTTTCTCTTTATTTCTTCTT+TGG - tig0033693:3945-3964 Msa1452140:exon 25.0%
! TAAACTTTGTCTTTAGTTGA+AGG - tig0033693:3988-4007 Msa1452140:CDS 25.0%
! AGGATTAAGAAGAATTTAAG+AGG - tig0033693:4008-4027 Msa1452140:CDS 25.0%
!!! GTTACATTGTTGTTTTGTTT+TGG - tig0033693:4030-4049 Msa1452140:CDS 25.0%
!!! TTTTGGTTAGTTGTTTGTTA+TGG - tig0033693:4047-4066 Msa1452140:CDS 25.0%
!! TATCATTTTCTCTCTGATAT+TGG - tig0033693:4183-4202 Msa1452140:intron 25.0%
! TCTTTGTAATGTTCTTAACA+AGG - tig0033693:4397-4416 Msa1452140:CDS 25.0%
! AGTAAATCAAATCAAGACTA+TGG + tig0033693:4450-4469 None:intergenic 25.0%
! AAATACTGAAAAGCAGATAA+TGG + tig0033693:4576-4595 None:intergenic 25.0%
! TGAAAATGTTAGAAACTTTC+TGG - tig0033693:4596-4615 Msa1452140:CDS 25.0%
!!! AGTTCAATAAATGTTGACTT+TGG - tig0033693:4789-4808 Msa1452140:CDS 25.0%
! ATCAAATACAAAACCCTATT+TGG - tig0033693:5318-5337 Msa1452140:CDS 25.0%
! TTAAACGGTTTATCCAAATA+GGG + tig0033693:5334-5353 None:intergenic 25.0%
! ATTAAACGGTTTATCCAAAT+AGG + tig0033693:5335-5354 None:intergenic 25.0%
!! GTATCTAAAACAGTCATTAA+GGG - tig0033693:5453-5472 Msa1452140:intron 25.0%
!! TATCTAAAACAGTCATTAAG+GGG - tig0033693:5454-5473 Msa1452140:intron 25.0%
! AATAACCAATTCTGCATTTA+GGG + tig0033693:5536-5555 None:intergenic 25.0%
!! CTTTAAGAAAGTAATCTCAA+AGG + tig0033693:5642-5661 None:intergenic 25.0%
!! AGCAAAGTATTTACCTAAAT+TGG + tig0033693:6359-6378 None:intergenic 25.0%
! GTGAAAACTAAAATATGATG+AGG + tig0033693:6445-6464 None:intergenic 25.0%
!! AAGGTTAACTTTGTTTAATC+AGG - tig0033693:6651-6670 Msa1452140:intron 25.0%
!!! TTGTTTAATCAGGAAGTATT+AGG - tig0033693:6661-6680 Msa1452140:intron 25.0%
!!! TGTTTAATCAGGAAGTATTA+GGG - tig0033693:6662-6681 Msa1452140:intron 25.0%
! CTAAAATATAGTAATCTTGC+AGG + tig0033693:6877-6896 None:intergenic 25.0%
!!! ATTTTTTGTCTATTGTGTTC+AGG - tig0033693:6908-6927 Msa1452140:intron 25.0%
!!! TTTTTTGTCTATTGTGTTCA+GGG - tig0033693:6909-6928 Msa1452140:intron 25.0%
! AATGTTTGCATATTTGCTTA+CGG - tig0033693:6983-7002 Msa1452140:CDS 25.0%
!! AATTTTGTTGAAATGCAGAA+CGG - tig0033693:7088-7107 Msa1452140:intron 25.0%
! TCTAATGTATGAATGGTTAA+GGG + tig0033693:7501-7520 None:intergenic 25.0%
! TTCTAATGTATGAATGGTTA+AGG + tig0033693:7502-7521 None:intergenic 25.0%
! ACGAATTTCTAATGTATGAA+TGG + tig0033693:7508-7527 None:intergenic 25.0%
! TGTTATTGAACTAATGAACT+TGG - tig0033693:7593-7612 Msa1452140:intron 25.0%
! GTTATTGAACTAATGAACTT+GGG - tig0033693:7594-7613 Msa1452140:intron 25.0%
! TGATAGAATTGTATAACTGA+GGG + tig0033693:8084-8103 None:intergenic 25.0%
! ATGATAGAATTGTATAACTG+AGG + tig0033693:8085-8104 None:intergenic 25.0%
!!! TGTTTTTCATTATGTTGCTT+GGG - tig0033693:8110-8129 Msa1452140:intron 25.0%
! TAAGACTATTATGAAGAACT+AGG + tig0033693:8332-8351 None:intergenic 25.0%
! AGATATCAATAAGAAATAGC+CGG + tig0033693:8693-8712 None:intergenic 25.0%
! ACCCAGCAAAAAAATATATA+TGG + tig0033693:9738-9757 None:intergenic 25.0%
! TGTTGTATTTACACAGATAA+TGG - tig0033693:9783-9802 Msa1452140:five_prime_UTR 25.0%
! TATTTAACATTAGAGCTTTC+AGG - tig0033693:9848-9867 Msa1452140:five_prime_UTR 25.0%
TCTCTCTATGATCTTATAGT+TGG + tig0033693:3876-3895 None:intergenic 30.0%
TCGTCTTAAAGATCTTGATT+TGG - tig0033693:4128-4147 Msa1452140:intron 30.0%
!!! CTGTATTTTCTTTAAGGTTG+TGG - tig0033693:4512-4531 Msa1452140:CDS 30.0%
AAATGTTAGAAACTTTCTGG+TGG - tig0033693:4599-4618 Msa1452140:CDS 30.0%
! GATCTAGAACAAGTATGTAA+AGG - tig0033693:4660-4679 Msa1452140:CDS 30.0%
!!! ATTGATTCATGTTTTTAGGG+AGG - tig0033693:4826-4845 Msa1452140:intron 30.0%
CCATTCACTATAGGATTTAA+GGG + tig0033693:4884-4903 None:intergenic 30.0%
TCCATTCACTATAGGATTTA+AGG + tig0033693:4885-4904 None:intergenic 30.0%
! AGTTTGTTTCCATTCACTAT+AGG + tig0033693:4893-4912 None:intergenic 30.0%
TATAGTGAATGGAAACAAAC+TGG - tig0033693:4892-4911 Msa1452140:intron 30.0%
ATAGTGAATGGAAACAAACT+GGG - tig0033693:4893-4912 Msa1452140:intron 30.0%
CTTGACAAAGAATTGGTAAA+TGG + tig0033693:4997-5016 None:intergenic 30.0%
CATTTACCAATTCTTTGTCA+AGG - tig0033693:4995-5014 Msa1452140:CDS 30.0%
! AGATTTTTCATTGATGGAAG+AGG + tig0033693:5022-5041 None:intergenic 30.0%
! AGTCACAGATTTTTCATTGA+TGG + tig0033693:5028-5047 None:intergenic 30.0%
TGATGTCGAGTCTAATAAAA+TGG - tig0033693:5059-5078 Msa1452140:CDS 30.0%
! TATGTGCTATGATTTTGTCT+AGG - tig0033693:5109-5128 Msa1452140:CDS 30.0%
AGCTTATACATAAGCACTTA+TGG + tig0033693:5370-5389 None:intergenic 30.0%
! GGTATCTAAAACAGTCATTA+AGG - tig0033693:5452-5471 Msa1452140:intron 30.0%
CAATAACCAATTCTGCATTT+AGG + tig0033693:5537-5556 None:intergenic 30.0%
AGTAATATTGTTCTTCTGCA+TGG - tig0033693:5660-5679 Msa1452140:CDS 30.0%
TAGCTAATGGCATTACTTAA+AGG + tig0033693:5775-5794 None:intergenic 30.0%
! AGTTTTTATGGCACGTAAAA+AGG - tig0033693:5947-5966 Msa1452140:CDS 30.0%
AATGCTTGATTCTTATACTG+TGG - tig0033693:6023-6042 Msa1452140:CDS 30.0%
TTGTTATCCACCTAATCAAT+CGG + tig0033693:6052-6071 None:intergenic 30.0%
TCCTACAAAAAACACAAAGA+TGG + tig0033693:6265-6284 None:intergenic 30.0%
! TAGTTTTCACCTCTCTTTAT+AGG - tig0033693:6455-6474 Msa1452140:intron 30.0%
CTTAAGGGTAATAAGATTAC+TGG - tig0033693:6566-6585 Msa1452140:CDS 30.0%
ATTAATGTTCCCTCAAAGAA+TGG - tig0033693:6768-6787 Msa1452140:CDS 30.0%
TTAATGTTCCCTCAAAGAAT+GGG - tig0033693:6769-6788 Msa1452140:CDS 30.0%
AAAGACTTTGTTGAAGTTGA+AGG + tig0033693:6808-6827 None:intergenic 30.0%
TTCAACTTCAACAAAGTCTT+TGG - tig0033693:6807-6826 Msa1452140:CDS 30.0%
! TTTTTGTCTATTGTGTTCAG+GGG - tig0033693:6910-6929 Msa1452140:intron 30.0%
! AGAACGGACTTAAAAAACAA+TGG - tig0033693:7104-7123 Msa1452140:intron 30.0%
! TTCGTATTTGAAATGTAGAC+TGG - tig0033693:7184-7203 Msa1452140:intron 30.0%
!!! CTTTTTTCTGTGATCTCTTT+TGG + tig0033693:7211-7230 None:intergenic 30.0%
TTATACAGCGAATCAAAGAA+AGG - tig0033693:7267-7286 Msa1452140:CDS 30.0%
ACAATGAAAACAGCCTTTAT+TGG - tig0033693:7466-7485 Msa1452140:CDS 30.0%
!! TTGTTGATGATACTTGAACA+AGG + tig0033693:7569-7588 None:intergenic 30.0%
TGGATAACAGGACAATAAAT+AGG + tig0033693:7688-7707 None:intergenic 30.0%
AAATGTCACAAAAACAGTTG+TGG + tig0033693:7708-7727 None:intergenic 30.0%
TAACAAATCTCTTTCAGCTT+TGG - tig0033693:7920-7939 Msa1452140:intron 30.0%
AACAAATCTCTTTCAGCTTT+GGG - tig0033693:7921-7940 Msa1452140:intron 30.0%
!! TGAGTTTGCTATTTCTGTAA+GGG + tig0033693:7986-8005 None:intergenic 30.0%
AAAACTTACCAAGTGAATCT+TGG + tig0033693:8019-8038 None:intergenic 30.0%
!!! TCACTTGGTAAGTTTTAAGT+TGG - tig0033693:8023-8042 Msa1452140:intron 30.0%
! GTGTTTTTCATTATGTTGCT+TGG - tig0033693:8109-8128 Msa1452140:intron 30.0%
!! TTTTATTTGGATGATCCCTT+TGG - tig0033693:8664-8683 Msa1452140:CDS 30.0%
TTTGAACAAGACTATTCACT+GGG + tig0033693:8823-8842 None:intergenic 30.0%
! TTTTGAACAAGACTATTCAC+TGG + tig0033693:8824-8843 None:intergenic 30.0%
!! TAGTCTTGTTCAAAATTGTG+TGG - tig0033693:8829-8848 Msa1452140:intron 30.0%
TCCTATAATATGTTCATGAG+AGG - tig0033693:9025-9044 Msa1452140:intron 30.0%
ATGTTCAAAATTGTATGCAC+AGG + tig0033693:9428-9447 None:intergenic 30.0%
TTGACATGAAACGTAAAACT+GGG - tig0033693:9583-9602 Msa1452140:intron 30.0%
CTCGAACTAAAAAATTGTGA+AGG + tig0033693:9686-9705 None:intergenic 30.0%
!!! CTTCACAATTTTTTAGTTCG+AGG - tig0033693:9684-9703 Msa1452140:intron 30.0%
! GATGATGTTTGGAACATAGT+GGG - tig0033693:3633-3652 Msa1452140:three_prime_UTR 35.0%
! ATGATGTTTGGAACATAGTG+GGG - tig0033693:3634-3653 Msa1452140:three_prime_UTR 35.0%
! ACTATCTCTCTTTGTTGCTT+CGG + tig0033693:3697-3716 None:intergenic 35.0%
AAGCAACAAAGAGAGATAGT+GGG - tig0033693:3697-3716 Msa1452140:three_prime_UTR 35.0%
TCTAGAAAATCAGAAGAAGC+TGG - tig0033693:4153-4172 Msa1452140:intron 35.0%
TTAAGAAGATATGAAGCAGC+AGG - tig0033693:4278-4297 Msa1452140:intron 35.0%
TAAGAAGATATGAAGCAGCA+GGG - tig0033693:4279-4298 Msa1452140:intron 35.0%
TGTTCTTAACAAGGTTCATC+CGG - tig0033693:4406-4425 Msa1452140:CDS 35.0%
AATTGGAATTCCTACCTTTG+AGG - tig0033693:4632-4651 Msa1452140:CDS 35.0%
TTTAGGGAGGAAAATCATCA+AGG - tig0033693:4839-4858 Msa1452140:intron 35.0%
AAGGATTGTGAGTAGTGTAT+TGG - tig0033693:4858-4877 Msa1452140:intron 35.0%
CCCTTAAATCCTATAGTGAA+TGG - tig0033693:4881-4900 Msa1452140:intron 35.0%
TAGTGAATGGAAACAAACTG+GGG - tig0033693:4894-4913 Msa1452140:intron 35.0%
GCTAATGGTGTATGGAAATT+TGG - tig0033693:4916-4935 Msa1452140:intron 35.0%
AATGGTGTATGGAAATTTGG+TGG - tig0033693:4919-4938 Msa1452140:intron 35.0%
! AAAGATTTTGCAGTGATTGC+TGG + tig0033693:4955-4974 None:intergenic 35.0%
CAAAGAATTGGTAAATGGCT+CGG + tig0033693:4992-5011 None:intergenic 35.0%
TTTATTAGACTCGACATCAG+AGG + tig0033693:5058-5077 None:intergenic 35.0%
GTCGAGTCTAATAAAATGGT+TGG - tig0033693:5063-5082 Msa1452140:CDS 35.0%
! ATGATTTTGTCTAGGTGAGA+AGG - tig0033693:5117-5136 Msa1452140:CDS 35.0%
!! CAGTCTAGTTCTCATTCTTT+GGG - tig0033693:5176-5195 Msa1452140:intron 35.0%
! TGTTCTTTTGTGTCTCACAT+AGG - tig0033693:5269-5288 Msa1452140:CDS 35.0%
TGTGCATCTAAAAATTGGAC+AGG - tig0033693:5431-5450 Msa1452140:intron 35.0%
!!! TCTCTTCCTTTTAGTTTCTG+TGG - tig0033693:5477-5496 Msa1452140:intron 35.0%
AAATGGCCACAGAAACTAAA+AGG + tig0033693:5486-5505 None:intergenic 35.0%
! ACAGTTGGTTGAATCTGTTT+TGG - tig0033693:5684-5703 Msa1452140:CDS 35.0%
AGTATCATACCAGTTCATCT+TGG + tig0033693:5747-5766 None:intergenic 35.0%
AGTGAAATGTCTCAAAGAGA+TGG - tig0033693:5913-5932 Msa1452140:CDS 35.0%
! GAGCTGTAGCAAAGTTTTTA+TGG - tig0033693:5935-5954 Msa1452140:CDS 35.0%
TCCTATGGTAACAAAGAAAG+AGG - tig0033693:6075-6094 Msa1452140:intron 35.0%
TCCTCTTTCTTTGTTACCAT+AGG + tig0033693:6079-6098 None:intergenic 35.0%
AGCAAATGCTCTTTGATCAA+CGG - tig0033693:6155-6174 Msa1452140:intron 35.0%
!!! GCCATCTTTGTGTTTTTTGT+AGG - tig0033693:6261-6280 Msa1452140:CDS 35.0%
CATGCAAATGAAATTTCACG+AGG - tig0033693:6327-6346 Msa1452140:CDS 35.0%
TTTATAGGCATGCACATTCA+CGG - tig0033693:6470-6489 Msa1452140:intron 35.0%
CAAACTATACAATGAAGTCC+AGG - tig0033693:6541-6560 Msa1452140:CDS 35.0%
AATGAAGTCCAGGATCTTAA+GGG - tig0033693:6551-6570 Msa1452140:CDS 35.0%
TCTTATTACCCTTAAGATCC+TGG + tig0033693:6562-6581 None:intergenic 35.0%
AGGGTAATAAGATTACTGGT+TGG - tig0033693:6570-6589 Msa1452140:CDS 35.0%
! TAATAAGATTACTGGTTGGC+TGG - tig0033693:6574-6593 Msa1452140:CDS 35.0%
TTTGGTTGTCCAGATAAGAA+AGG + tig0033693:6705-6724 None:intergenic 35.0%
CAGGTAAGAGATAACTGAAA+AGG + tig0033693:6858-6877 None:intergenic 35.0%
! AAGTTTTTCCTGATCCTGTT+TGG + tig0033693:7009-7028 None:intergenic 35.0%
ATCAGGAAAAACTTTCACCA+TGG - tig0033693:7015-7034 Msa1452140:CDS 35.0%
ACTTCAACTGTATCTTACCA+TGG + tig0033693:7035-7054 None:intergenic 35.0%
AAAGCCAAGGTGTAAATTAC+AGG - tig0033693:7227-7246 Msa1452140:CDS 35.0%
AAGCCAAGGTGTAAATTACA+GGG - tig0033693:7228-7247 Msa1452140:CDS 35.0%
! AGAGATCTATTGGTTACTGA+TGG - tig0033693:7346-7365 Msa1452140:intron 35.0%
ATGAAAACAGCCTTTATTGG+TGG - tig0033693:7469-7488 Msa1452140:CDS 35.0%
ATTCGTAGTAACTCTCAAAG+AGG - tig0033693:7522-7541 Msa1452140:intron 35.0%
TTCGTAGTAACTCTCAAAGA+GGG - tig0033693:7523-7542 Msa1452140:intron 35.0%
CAAAAACAGTTGTGGATAAC+AGG + tig0033693:7700-7719 None:intergenic 35.0%
!!! ATGTTGGTTTTTCTGAGCAA+GGG + tig0033693:7961-7980 None:intergenic 35.0%
! TATTTCTGTAAGGGACATGT+TGG + tig0033693:7977-7996 None:intergenic 35.0%
!! GTGAGTTTGCTATTTCTGTA+AGG + tig0033693:7987-8006 None:intergenic 35.0%
CAATTACTCCAAGATTCACT+TGG - tig0033693:8008-8027 Msa1452140:intron 35.0%
GTGAACAAACATTAGTGTCT+TGG + tig0033693:8155-8174 None:intergenic 35.0%
! AATTGTTTCTCCAACAGCAT+TGG + tig0033693:8191-8210 None:intergenic 35.0%
GACTATTATGAAGAACTAGG+AGG + tig0033693:8329-8348 None:intergenic 35.0%
TAAACTTAACTGACGCAGTA+AGG + tig0033693:8360-8379 None:intergenic 35.0%
TTGAGTTCTTTGTCTCGATA+TGG + tig0033693:8756-8775 None:intergenic 35.0%
TTGAACAAGACTATTCACTG+GGG + tig0033693:8822-8841 None:intergenic 35.0%
AAATTGTGTGGAAGACGATA+AGG - tig0033693:8841-8860 Msa1452140:intron 35.0%
AAGTTAGATGTGAACAAGAC+TGG - tig0033693:8905-8924 Msa1452140:CDS 35.0%
AACAAGACTGGTAACATGTT+AGG - tig0033693:8917-8936 Msa1452140:CDS 35.0%
ACAAGACTGGTAACATGTTA+GGG - tig0033693:8918-8937 Msa1452140:CDS 35.0%
!! AGATAATGGGAACTTATCTG+AGG - tig0033693:8952-8971 Msa1452140:CDS 35.0%
GCCTCTCATGAACATATTAT+AGG + tig0033693:9029-9048 None:intergenic 35.0%
TCTTCTTTAGTAATGCTCGT+AGG - tig0033693:9243-9262 Msa1452140:CDS 35.0%
CTTCTTTAGTAATGCTCGTA+GGG - tig0033693:9244-9263 Msa1452140:CDS 35.0%
CCATTTGTTTGTTTCCTTGA+AGG + tig0033693:9525-9544 None:intergenic 35.0%
CCTTCAAGGAAACAAACAAA+TGG - tig0033693:9522-9541 Msa1452140:intron 35.0%
! GTTTTACGTTTCATGTCAAC+TGG + tig0033693:9582-9601 None:intergenic 35.0%
GTTGACATGAAACGTAAAAC+TGG - tig0033693:9582-9601 Msa1452140:intron 35.0%
! GGATGATGTTTGGAACATAG+TGG - tig0033693:3632-3651 Msa1452140:three_prime_UTR 40.0%
GAAGCAACAAAGAGAGATAG+TGG - tig0033693:3696-3715 Msa1452140:three_prime_UTR 40.0%
! TTTAGGCTTGGTTTGAGAAG+TGG - tig0033693:4368-4387 Msa1452140:CDS 40.0%
! TTAGGCTTGGTTTGAGAAGT+GGG - tig0033693:4369-4388 Msa1452140:CDS 40.0%
GTTCTTAACAAGGTTCATCC+GGG - tig0033693:4407-4426 Msa1452140:CDS 40.0%
AATCAAGACTATGGTCACCT+TGG + tig0033693:4441-4460 None:intergenic 40.0%
AGGTAGGAATTCCAATTTCC+TGG + tig0033693:4629-4648 None:intergenic 40.0%
TTCTAGATCAGATGCCTCAA+AGG + tig0033693:4649-4668 None:intergenic 40.0%
AGAGGTCCTTGACAAAGAAT+TGG + tig0033693:5004-5023 None:intergenic 40.0%
! ATTTTGTCTAGGTGAGAAGG+CGG - tig0033693:5120-5139 Msa1452140:CDS 40.0%
GAGAAGGCGGAATAACTAAA+TGG - tig0033693:5133-5152 Msa1452140:CDS 40.0%
!! GCAGTCTAGTTCTCATTCTT+TGG - tig0033693:5175-5194 Msa1452140:intron 40.0%
TTCCTACGGTAAGGACTAAA+TGG - tig0033693:5243-5262 Msa1452140:intron 40.0%
ATCCATTTAGTCCTTACCGT+AGG + tig0033693:5248-5267 None:intergenic 40.0%
AGCGTTTCAGGAAAACGAAA+TGG + tig0033693:5503-5522 None:intergenic 40.0%
CTAGTGCAGTACTACTAGAT+GGG + tig0033693:5565-5584 None:intergenic 40.0%
ACTAGTGCAGTACTACTAGA+TGG + tig0033693:5566-5585 None:intergenic 40.0%
CATTACAAGCCAAGATGAAC+TGG - tig0033693:5735-5754 Msa1452140:CDS 40.0%
ACTGTGGTTTCCGATTGATT+AGG - tig0033693:6039-6058 Msa1452140:intron 40.0%
GGTGGATAACAAGATTCCTA+TGG - tig0033693:6060-6079 Msa1452140:intron 40.0%
TAAAAACCATGTTGCTGACG+AGG - tig0033693:6108-6127 Msa1452140:intron 40.0%
GGCAGAGAGATATTCAAGTA+GGG - tig0033693:6176-6195 Msa1452140:intron 40.0%
ATGTGCATGCCTATAAAGAG+AGG + tig0033693:6467-6486 None:intergenic 40.0%
CAATGAAGTCCAGGATCTTA+AGG - tig0033693:6550-6569 Msa1452140:CDS 40.0%
CGAGTAAGACCTTTCTTATC+TGG - tig0033693:6693-6712 Msa1452140:intron 40.0%
ACCATCTTCTATGTTCTCCA+CGG + tig0033693:6739-6758 None:intergenic 40.0%
TTCCCTCAAAGAATGGGAAA+GGG - tig0033693:6775-6794 Msa1452140:CDS 40.0%
CTGAAAAGGAAACCAACCTT+GGG + tig0033693:6844-6863 None:intergenic 40.0%
ACTGAAAAGGAAACCAACCT+TGG + tig0033693:6845-6864 None:intergenic 40.0%
ATATTTGCTTACGGCCAAAC+AGG - tig0033693:6992-7011 Msa1452140:CDS 40.0%
GAGATCACAGAAAAAAGCCA+AGG - tig0033693:7214-7233 Msa1452140:CDS 40.0%
TGAGCAAGTCAGAGATCTAT+TGG - tig0033693:7336-7355 Msa1452140:intron 40.0%
AGGATATACACCTGTGAGAT+CGG + tig0033693:7668-7687 None:intergenic 40.0%
TGCTTGACTGTACATGTTCA+AGG - tig0033693:7777-7796 Msa1452140:intron 40.0%
!!! CATGTTGGTTTTTCTGAGCA+AGG + tig0033693:7962-7981 None:intergenic 40.0%
! ATGTTGCTTGGGATAACTTC+AGG - tig0033693:8121-8140 Msa1452140:intron 40.0%
AGAGTTGCTACAGTTGAACT+TGG - tig0033693:8232-8251 Msa1452140:intron 40.0%
CATTCTATATCTGGAAGCTC+TGG - tig0033693:8449-8468 Msa1452140:intron 40.0%
GATATCATGGATGATCCCTT+TGG - tig0033693:8530-8549 Msa1452140:CDS 40.0%
AAGTTGCCAACATCAATCAC+TGG + tig0033693:8566-8585 None:intergenic 40.0%
GATTGATGTTGGCAACTTAG+AGG - tig0033693:8568-8587 Msa1452140:CDS 40.0%
CATTAACAAATTCACCACCC+TGG - tig0033693:8795-8814 Msa1452140:intron 40.0%
TGAACAAGACTATTCACTGG+GGG + tig0033693:8821-8840 None:intergenic 40.0%
!! AGAGTGGGTTGATAAGGTTA+TGG - tig0033693:8877-8896 Msa1452140:intron 40.0%
! TGGTAACATGTTAGGGTGTT+GGG - tig0033693:8925-8944 Msa1452140:CDS 40.0%
! GGATCGTTCTGAGTATACTT+TGG + tig0033693:9008-9027 None:intergenic 40.0%
! CCAGTTTAACATTGCTGGTT+CGG - tig0033693:9051-9070 Msa1452140:intron 40.0%
GTCATGTTCTGATGAATCAC+TGG + tig0033693:9104-9123 None:intergenic 40.0%
!! CATCAGAACATGACTTGCTT+TGG - tig0033693:9110-9129 Msa1452140:intron 40.0%
AAAGTTACAAGCGTAGCCAA+CGG - tig0033693:9148-9167 Msa1452140:CDS 40.0%
! CAGCTAAAAGCACAGAATTG+AGG - tig0033693:9206-9225 Msa1452140:CDS 40.0%
GTTTGTTTCCTTGAAGGTGA+AGG + tig0033693:9519-9538 None:intergenic 40.0%
! GTTTGGAACATAGTGGGGTT+CGG - tig0033693:3639-3658 Msa1452140:three_prime_UTR 45.0%
!! CAACAAAGAGAGATAGTGGG+AGG - tig0033693:3700-3719 Msa1452140:three_prime_UTR 45.0%
GTGTACAGAGCAAAAGCCAA+AGG - tig0033693:3780-3799 Msa1452140:three_prime_UTR 45.0%
!!! GGCAGCATTGTCATTTTCAG+TGG - tig0033693:4068-4087 Msa1452140:intron 45.0%
TTCAGTGGCATCTGTTGTTG+AGG - tig0033693:4083-4102 Msa1452140:intron 45.0%
GAGGATGTTCTTCAACAGCA+TGG - tig0033693:4102-4121 Msa1452140:intron 45.0%
AGCAGGGTGGTTGAGAAAAA+TGG - tig0033693:4295-4314 Msa1452140:intron 45.0%
GGGTGGTTGAGAAAAATGGT+TGG - tig0033693:4299-4318 Msa1452140:intron 45.0%
! AGCCTTCTGAGGAAGAGTTT+AGG - tig0033693:4351-4370 Msa1452140:CDS 45.0%
AGCCTAAACTCTTCCTCAGA+AGG + tig0033693:4356-4375 None:intergenic 45.0%
TCTGAGGAAGAGTTTAGGCT+TGG - tig0033693:4356-4375 Msa1452140:CDS 45.0%
! GGGATTAGTGCAGAATCAAC+AGG + tig0033693:4543-4562 None:intergenic 45.0%
! AAACTTTCTGGTGGCTATCC+AGG - tig0033693:4608-4627 Msa1452140:CDS 45.0%
AGATCAGATGCCTCAAAGGT+AGG + tig0033693:4645-4664 None:intergenic 45.0%
TGGAAACAAACTGGGGCTAA+TGG - tig0033693:4901-4920 Msa1452140:intron 45.0%
AAACTGGGGCTAATGGTGTA+TGG - tig0033693:4908-4927 Msa1452140:intron 45.0%
GAAGCCAGAAGAAGTTCCTA+CGG - tig0033693:5229-5248 Msa1452140:intron 45.0%
CTTACCGTAGGAACTTCTTC+TGG + tig0033693:5236-5255 None:intergenic 45.0%
CAGAAGAAGTTCCTACGGTA+AGG - tig0033693:5234-5253 Msa1452140:intron 45.0%
ATGCGCCCTAAATGCAGAAT+TGG - tig0033693:5528-5547 Msa1452140:intron 45.0%
GTTCTTCTGCATGGAACAGT+TGG - tig0033693:5669-5688 Msa1452140:CDS 45.0%
!!! TGTTTTGGCGAAAGTCGTAG+AGG - tig0033693:5699-5718 Msa1452140:CDS 45.0%
GTGGTTTCCGATTGATTAGG+TGG - tig0033693:6042-6061 Msa1452140:intron 45.0%
CGGCAGAGAGATATTCAAGT+AGG - tig0033693:6175-6194 Msa1452140:intron 45.0%
ACAGTTCAAACCACCAAAGC+TGG - tig0033693:6295-6314 Msa1452140:CDS 45.0%
CATGAACTGCATACCAGCTT+TGG + tig0033693:6311-6330 None:intergenic 45.0%
CACGAGGAGTTCTCCAATTT+AGG - tig0033693:6343-6362 Msa1452140:CDS 45.0%
! ACCAAATCATTCGAGTACCG+TGG - tig0033693:6719-6738 Msa1452140:intron 45.0%
TCCACGGTACTCGAATGATT+TGG + tig0033693:6723-6742 None:intergenic 45.0%
ACCGTGGAGAACATAGAAGA+TGG - tig0033693:6735-6754 Msa1452140:CDS 45.0%
GTTCCCTCAAAGAATGGGAA+AGG - tig0033693:6774-6793 Msa1452140:CDS 45.0%
TTGTCTATTGTGTTCAGGGG+AGG - tig0033693:6913-6932 Msa1452140:intron 45.0%
CTGATATGCAGCCACTTGTT+AGG - tig0033693:6942-6961 Msa1452140:intron 45.0%
GAGCCCTGTAATTTACACCT+TGG + tig0033693:7234-7253 None:intergenic 45.0%
AGGGATAGCACCACCAATAA+AGG + tig0033693:7482-7501 None:intergenic 45.0%
ACTTGAACAAGGCTTGCATC+TGG + tig0033693:7558-7577 None:intergenic 45.0%
CAAGGAAGAGACTTGACATC+TGG - tig0033693:7795-7814 Msa1452140:intron 45.0%
! TGACATCTGGAGCTGTCTTA+CGG - tig0033693:7808-7827 Msa1452140:intron 45.0%
! ATGCATGCATCTCGTTGACT+TGG - tig0033693:7833-7852 Msa1452140:CDS 45.0%
TTGCTTGGGATAACTTCAGG+AGG - tig0033693:8124-8143 Msa1452140:intron 45.0%
GTTTGTTCACATTAGTCCCG+AGG - tig0033693:8165-8184 Msa1452140:intron 45.0%
CGTCAAAGAGCTCAAAGAAC+AGG - tig0033693:8285-8304 Msa1452140:intron 45.0%
! TAAGGCTGGCAATCTGAAAC+AGG + tig0033693:8394-8413 None:intergenic 45.0%
GTTTCAGATTGCCAGCCTTA+AGG - tig0033693:8394-8413 Msa1452140:intron 45.0%
TTCTTGCCAATGCTGCCTTA+AGG + tig0033693:8412-8431 None:intergenic 45.0%
!! TAAGGCAGCATTGGCAAGAA+AGG - tig0033693:8412-8431 Msa1452140:intron 45.0%
!! CTGGAAGCTCTGGAAAATGT+AGG - tig0033693:8459-8478 Msa1452140:intron 45.0%
! CTCTGGAAAATGTAGGACAG+CGG - tig0033693:8466-8485 Msa1452140:intron 45.0%
! CAACATCAATCACTGGTTGC+CGG + tig0033693:8559-8578 None:intergenic 45.0%
AGAAATAGCCGGCATCCAAA+GGG + tig0033693:8682-8701 None:intergenic 45.0%
AAGAAATAGCCGGCATCCAA+AGG + tig0033693:8683-8702 None:intergenic 45.0%
GTGGAAGACGATAAGGAAAC+CGG - tig0033693:8848-8867 Msa1452140:intron 45.0%
!! TACAGGAGAGTGGGTTGATA+AGG - tig0033693:8871-8890 Msa1452140:intron 45.0%
CTGGTAACATGTTAGGGTGT+TGG - tig0033693:8924-8943 Msa1452140:CDS 45.0%
! GGTGTTGGGAAGCAGATAAT+GGG - tig0033693:8939-8958 Msa1452140:CDS 45.0%
GGCAACCAGTTTAACATTGC+TGG - tig0033693:9046-9065 Msa1452140:intron 45.0%
CCGAACCAGCAATGTTAAAC+TGG + tig0033693:9054-9073 None:intergenic 45.0%
GGTAGCAGCATCAACATCAT+CGG + tig0033693:9083-9102 None:intergenic 45.0%
AGCCAACGGACATGAATCAA+AGG - tig0033693:9162-9181 Msa1452140:CDS 45.0%
GCCAACGGACATGAATCAAA+GGG - tig0033693:9163-9182 Msa1452140:CDS 45.0%
ACCCTTTGATTCATGTCCGT+TGG + tig0033693:9167-9186 None:intergenic 45.0%
ACGGACATGAATCAAAGGGT+AGG - tig0033693:9167-9186 Msa1452140:CDS 45.0%
TAATGCCCGTTGCTTGTACA+TGG - tig0033693:9811-9830 Msa1452140:five_prime_UTR 45.0%
TCATGCCATGTACAAGCAAC+GGG + tig0033693:9819-9838 None:intergenic 45.0%
GTCATGCCATGTACAAGCAA+CGG + tig0033693:9820-9839 None:intergenic 45.0%
CAACTCCTTCCCACATGCTT+CGG + tig0033693:3667-3686 None:intergenic 50.0%
!! AAGAGAGATAGTGGGAGGAG+AGG - tig0033693:3705-3724 Msa1452140:three_prime_UTR 50.0%
GAAGATATGAAGCAGCAGGG+TGG - tig0033693:4282-4301 Msa1452140:intron 50.0%
TTTACCAGCAGAGCCTTCTG+AGG - tig0033693:4340-4359 Msa1452140:intron 50.0%
TCATCCGGGTTCTGTATCCA+AGG - tig0033693:4421-4440 Msa1452140:CDS 50.0%
GTCACCTTGGATACAGAACC+CGG + tig0033693:4428-4447 None:intergenic 50.0%
GATTCTGCACTAATCCCCGA+TGG - tig0033693:4546-4565 Msa1452140:CDS 50.0%
! AGCAGATAATGGCGCTCCAT+CGG + tig0033693:4565-4584 None:intergenic 50.0%
CTGGTGGCTATCCAGGAAAT+TGG - tig0033693:4615-4634 Msa1452140:CDS 50.0%
!! GGCGCATTTTTCAGCGTTTC+AGG + tig0033693:5515-5534 None:intergenic 50.0%
! GAACTGCATACCAGCTTTGG+TGG + tig0033693:6308-6327 None:intergenic 50.0%
CGCCCTTTCCCATTCTTTGA+GGG + tig0033693:6780-6799 None:intergenic 50.0%
TCGAGCACAGACCTAACAAG+TGG + tig0033693:6956-6975 None:intergenic 50.0%
CTTGTTAGGTCTGTGCTCGA+TGG - tig0033693:6956-6975 Msa1452140:intron 50.0%
TCGGCTGCTACGGTCATTAA+GGG + tig0033693:7649-7668 None:intergenic 50.0%
ATCGGCTGCTACGGTCATTA+AGG + tig0033693:7650-7669 None:intergenic 50.0%
! GACATCTGGAGCTGTCTTAC+GGG - tig0033693:7809-7828 Msa1452140:intron 50.0%
! ACATCTGGAGCTGTCTTACG+GGG - tig0033693:7810-7829 Msa1452140:intron 50.0%
!! ATGCATCTCGTTGACTTGGC+AGG - tig0033693:7837-7856 Msa1452140:CDS 50.0%
!! TTGACTTGGCAGGAAGTGAG+AGG - tig0033693:7847-7866 Msa1452140:CDS 50.0%
! TGACTTGGCAGGAAGTGAGA+GGG - tig0033693:7848-7867 Msa1452140:CDS 50.0%
TGAGAGGGTCGACAAATCTG+AGG - tig0033693:7863-7882 Msa1452140:intron 50.0%
GACGGGCGATAGATTGAAAG+AGG - tig0033693:7887-7906 Msa1452140:intron 50.0%
TGGGATAACTTCAGGAGGAC+AGG - tig0033693:8129-8148 Msa1452140:intron 50.0%
!! TTCTCCAACAGCATTGGCCT+CGG + tig0033693:8185-8204 None:intergenic 50.0%
!! GCAGCATTGGCAAGAAAGGA+AGG - tig0033693:8416-8435 Msa1452140:intron 50.0%
CACCTTATCATGCAAGCCAG+CGG - tig0033693:8501-8520 Msa1452140:CDS 50.0%
ACCTTATCATGCAAGCCAGC+GGG - tig0033693:8502-8521 Msa1452140:CDS 50.0%
TGGATGATCCCTTTGGATGC+CGG - tig0033693:8537-8556 Msa1452140:CDS 50.0%
CGGCAACCAGTGATTGATGT+TGG - tig0033693:8557-8576 Msa1452140:CDS 50.0%
TGGATGATCCCTTTGGATGC+CGG - tig0033693:8537-8556 Msa1452140:CDS 50.0%
GACGATAAGGAAACCGGTAC+AGG - tig0033693:8854-8873 Msa1452140:intron 50.0%
ATCAACCCACTCTCCTGTAC+CGG + tig0033693:8870-8889 None:intergenic 50.0%
!! GGGTGTTGGGAAGCAGATAA+TGG - tig0033693:8938-8957 Msa1452140:CDS 50.0%
ATTGTATGCACAGGCAGCAC+TGG + tig0033693:9419-9438 None:intergenic 50.0%
CTACTGCTCCTTCACCTTCA+AGG - tig0033693:9508-9527 Msa1452140:intron 50.0%
TCGCACATCGAACACCAACA+AGG - tig0033693:9547-9566 Msa1452140:intron 50.0%
CGTTTCATGTCAACTGGAGC+TGG + tig0033693:9576-9595 None:intergenic 50.0%
GGTTCGGAACCGAAGCATGT+GGG - tig0033693:3655-3674 Msa1452140:three_prime_UTR 55.0%
CGAAGCATGTGGGAAGGAGT+TGG - tig0033693:3665-3684 Msa1452140:three_prime_UTR 55.0%
TCTTCCTCAGAAGGCTCTGC+TGG + tig0033693:4347-4366 None:intergenic 55.0%
! CAGATAATGGCGCTCCATCG+GGG + tig0033693:4563-4582 None:intergenic 55.0%
! GCAGATAATGGCGCTCCATC+GGG + tig0033693:4564-4583 None:intergenic 55.0%
GTGACTCCTCGTCAGCAACA+TGG + tig0033693:6117-6136 None:intergenic 55.0%
TTGCTGACGAGGAGTCACAG+AGG - tig0033693:6119-6138 Msa1452140:intron 55.0%
! GGCTTAGCTCATGCTGCTTC+TGG - tig0033693:6491-6510 Msa1452140:intron 55.0%
GCGCCCTTTCCCATTCTTTG+AGG + tig0033693:6781-6800 None:intergenic 55.0%
TTTGGACCATCTGCAGCCCA+AGG - tig0033693:6825-6844 Msa1452140:CDS 55.0%
AACCAACCTTGGGCTGCAGA+TGG + tig0033693:6834-6853 None:intergenic 55.0%
GCTTACGGCCAAACAGGATC+AGG - tig0033693:6998-7017 Msa1452140:CDS 55.0%
ACCTGTGAGATCGGCTGCTA+CGG + tig0033693:7659-7678 None:intergenic 55.0%
! GGTCGACAAATCTGAGGCGA+CGG - tig0033693:7869-7888 Msa1452140:intron 55.0%
! GTCGACAAATCTGAGGCGAC+GGG - tig0033693:7870-7889 Msa1452140:intron 55.0%
!! TCTCCAACAGCATTGGCCTC+GGG + tig0033693:8184-8203 None:intergenic 55.0%
CTGCCCGAGTCAACAAGGAT+GGG - tig0033693:8257-8276 Msa1452140:intron 55.0%
TGCCCGAGTCAACAAGGATG+GGG - tig0033693:8258-8277 Msa1452140:intron 55.0%
!! TGCCCCATCCTTGTTGACTC+GGG + tig0033693:8263-8282 None:intergenic 55.0%
! CTGCCCCATCCTTGTTGACT+CGG + tig0033693:8264-8283 None:intergenic 55.0%
TGCCAGCCTTAAGGCAGCAT+TGG - tig0033693:8403-8422 Msa1452140:intron 55.0%
TGCCAATGCTGCCTTAAGGC+TGG + tig0033693:8408-8427 None:intergenic 55.0%
GTAGGACAGCGGCTAGTGAA+CGG - tig0033693:8477-8496 Msa1452140:intron 55.0%
ACTGGTTGCCGGCATCCAAA+GGG + tig0033693:8548-8567 None:intergenic 55.0%
AGACTATTCACTGGGGGCCA+GGG + tig0033693:8815-8834 None:intergenic 55.0%
AAGACTATTCACTGGGGGCC+AGG + tig0033693:8816-8835 None:intergenic 55.0%
AGGAAACCGGTACAGGAGAG+TGG - tig0033693:8861-8880 Msa1452140:intron 55.0%
GGAAACCGGTACAGGAGAGT+GGG - tig0033693:8862-8881 Msa1452140:intron 55.0%
ACTGGAGCTGGTTGCCTTGT+TGG + tig0033693:9564-9583 None:intergenic 55.0%
GGGTTCGGAACCGAAGCATG+TGG - tig0033693:3654-3673 Msa1452140:three_prime_UTR 60.0%
CGGAACCGAAGCATGTGGGA+AGG - tig0033693:3659-3678 Msa1452140:three_prime_UTR 60.0%
GACCATCTGCAGCCCAAGGT+TGG - tig0033693:6829-6848 Msa1452140:CDS 60.0%
ACCGTAGCAGCCGATCTCAC+AGG - tig0033693:7655-7674 Msa1452140:CDS 60.0%
AGTCCCGAGGCCAATGCTGT+TGG - tig0033693:8178-8197 Msa1452140:intron 60.0%
!! TGGTGCTGCCCGAGTCAACA+AGG - tig0033693:8252-8271 Msa1452140:intron 60.0%
GCTGCCCGAGTCAACAAGGA+TGG - tig0033693:8256-8275 Msa1452140:intron 60.0%
!! GCCCGCTGGCTTGCATGATA+AGG + tig0033693:8506-8525 None:intergenic 60.0%
CCATGATATCTGCAGCCCGC+TGG + tig0033693:8520-8539 None:intergenic 60.0%
!! CCAGCGGGCTGCAGATATCA+TGG - tig0033693:8517-8536 Msa1452140:CDS 60.0%
! CACTGGTTGCCGGCATCCAA+AGG + tig0033693:8549-8568 None:intergenic 60.0%
GGGCTGTTGCTCCGACTGCA+CGG + tig0033693:7629-7648 None:intergenic 65.0%
CTATTCACTGGGGGCCAGGG+TGG + tig0033693:8812-8831 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0033693 gene 3626 9943 3626 ID=Msa1452140;Name=Msa1452140
tig0033693 mRNA 3626 9943 3626 ID=Msa1452140-mRNA-1;Parent=Msa1452140;Name=Msa1452140-mRNA-1;_AED=0.13;_eAED=0.13;_QI=185|0.84|0.8|1|0.94|0.9|20|326|1013
tig0033693 exon 3626 4081 3626 ID=Msa1452140-mRNA-1:exon:18442;Parent=Msa1452140-mRNA-1
tig0033693 exon 4342 4829 4342 ID=Msa1452140-mRNA-1:exon:18441;Parent=Msa1452140-mRNA-1
tig0033693 exon 4980 5168 4980 ID=Msa1452140-mRNA-1:exon:18440;Parent=Msa1452140-mRNA-1
tig0033693 exon 5263 5426 5263 ID=Msa1452140-mRNA-1:exon:18439;Parent=Msa1452140-mRNA-1
tig0033693 exon 5540 5793 5540 ID=Msa1452140-mRNA-1:exon:18438;Parent=Msa1452140-mRNA-1
tig0033693 exon 5893 6049 5893 ID=Msa1452140-mRNA-1:exon:18437;Parent=Msa1452140-mRNA-1
tig0033693 exon 6178 6367 6178 ID=Msa1452140-mRNA-1:exon:18436;Parent=Msa1452140-mRNA-1
tig0033693 exon 6533 6639 6533 ID=Msa1452140-mRNA-1:exon:18435;Parent=Msa1452140-mRNA-1
tig0033693 exon 6723 6896 6723 ID=Msa1452140-mRNA-1:exon:18434;Parent=Msa1452140-mRNA-1
tig0033693 exon 6982 7092 6982 ID=Msa1452140-mRNA-1:exon:18433;Parent=Msa1452140-mRNA-1
tig0033693 exon 7205 7286 7205 ID=Msa1452140-mRNA-1:exon:18432;Parent=Msa1452140-mRNA-1
tig0033693 exon 7377 7508 7377 ID=Msa1452140-mRNA-1:exon:18431;Parent=Msa1452140-mRNA-1
tig0033693 exon 7609 7674 7609 ID=Msa1452140-mRNA-1:exon:18430;Parent=Msa1452140-mRNA-1
tig0033693 exon 7813 7881 7813 ID=Msa1452140-mRNA-1:exon:18429;Parent=Msa1452140-mRNA-1
tig0033693 exon 8319 8390 8319 ID=Msa1452140-mRNA-1:exon:18428;Parent=Msa1452140-mRNA-1
tig0033693 exon 8489 8725 8489 ID=Msa1452140-mRNA-1:exon:18427;Parent=Msa1452140-mRNA-1
tig0033693 exon 8898 9041 8898 ID=Msa1452140-mRNA-1:exon:18426;Parent=Msa1452140-mRNA-1
tig0033693 exon 9127 9293 9127 ID=Msa1452140-mRNA-1:exon:18425;Parent=Msa1452140-mRNA-1
tig0033693 exon 9395 9512 9395 ID=Msa1452140-mRNA-1:exon:18424;Parent=Msa1452140-mRNA-1
tig0033693 exon 9768 9943 9768 ID=Msa1452140-mRNA-1:exon:18423;Parent=Msa1452140-mRNA-1
tig0033693 five_prime_UTR 9768 9943 9768 ID=Msa1452140-mRNA-1:five_prime_utr;Parent=Msa1452140-mRNA-1
tig0033693 five_prime_UTR 9504 9512 9504 ID=Msa1452140-mRNA-1:five_prime_utr;Parent=Msa1452140-mRNA-1
tig0033693 CDS 9395 9503 9395 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 9127 9293 9127 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 8898 9041 8898 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 8489 8725 8489 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 8319 8390 8319 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 7813 7881 7813 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 7609 7674 7609 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 7377 7508 7377 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 7205 7286 7205 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 6982 7092 6982 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 6723 6896 6723 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 6533 6639 6533 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 6178 6367 6178 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 5893 6049 5893 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 5540 5793 5540 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 5263 5426 5263 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 4980 5168 4980 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 4342 4829 4342 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 CDS 3952 4081 3952 ID=Msa1452140-mRNA-1:cds;Parent=Msa1452140-mRNA-1
tig0033693 three_prime_UTR 3626 3951 3626 ID=Msa1452140-mRNA-1:three_prime_utr;Parent=Msa1452140-mRNA-1
Gene Sequence

>Msa1452140

ATGGCAGCATTGTCATTTTCAGTGGCATCTGTTGTTGAGGATGTTCTTCAACAGCATGGTACTCGTCTTAAAGATCTTGATTTGGAATCTAGAAAATCAGAAGAAGCTGCATTAAGAAGATATGAAGCAGCAGGGTGGTTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCTTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTTTGTAATGTTCTTAACAAGGTTCATCCGGGTTCTGTATCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTAATCCCCGATGGAGCGCCATTATCTGCTTTTCAGTATTTTGAAAATGTTAGAAACTTTCTGGTGGCTATCCAGGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTAGAACAAGGAGGAAAATCATCAAGGATTGTGAGTAGTGTATTGGCCCTTAAATCCTATAGTGAATGGAAACAAACTGGGGCTAATGGTGTATGGAAATTTGGTGGAACTATCAAACCAGCAATCACTGCAAAATCTTTTGTGAGAAAAAACTCCGAGCCATTTACCAATTCTTTGTCAAGGACCTCTTCCATCAATGAAAAATCTGTGACTTCTTTTACCTCTGATGTCGAGTCTAATAAAATGTCTAGTTCTCATTCTTTGGGTATGCTTGTTCGTGCAATACTTTTCGATAAGAAGCCAGAAGAAGTTCCTACGTTGGTTGAATCTGTTTTGGCGAAAGTCGTAGAGGAGTTTGAGCATCGCATTACAAGCCAAGATGAACTGACAAAAACAACTTCAAGAAGTGAAATGTCTCAAAGAGATGGAGCTGTAGCAAAGTTTTTATGGCACGTGGATAACAAGATTCCTATGGTAACAAAGAAAGAGGAATTCATCTATAAAAACCATGTTGCTGACGAGGAGTCACAGAGGCAACTTCAGAAGCAGCAAATGCTCTTTGATCAACGGCAGAGAGATATTCAAGAATTAAAGCATACAGTTCAAACCACCAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCACGAGGAGTTCTCCAATTTAGGCATGCACATTCACGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTCGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGTAATAAGATTACTGGAAGTATTAGGGTTTACTGTCGAGTAAGACCTTTCTTATCTGGACAACCAAATCATTCGAGTACCGTGGAGAACATAGAAGATGGTGTTATCACAATTAATGTTCCCTCAAAGAATGGGAAAGGGCGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAGCCCAAGGGGAGGTCTTCGCTGATATGCAGCCACTTGTTAGGTCTGTGCTCGATGGTTTTAATGTTTGCATATTTGCTTACGGCCAAACAGGATCAGGAAAAACTTTCACCATGACTGGACCAAAAGAGATCACAGAAAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATCTATTTTATACAGCGAATCAAAGAAAGGACACTTTTCGCTATGATGTGTCTGTTCAGATGATTGAAATATATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGAACAAACAAAAGATATCCTTTTAAAATTCGTAGTAACTCTCAAAGAGGGCTAAGTGTACCAGATGCAAGCCTTGTTCAAGTATCATCAACAAATGATGTTATTGAACTAATGAACTTGGGTCATAAGAACCGTGCAGTCGGAGCAACAGCCCTTAATGACCGTAGCAGCCGATCTCACAGTTGCTTGACTGTACATGTTCAAGGAAGAGACTTGACATCTGGAGCTGTCTTACGGGGATGCATGCATCTCGTTGACTTGGCAGGAAGTGAGAGGGTCGACAAATCTGAGGCGACGGGCGATAGATTGAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCTTACAGAAATAGCAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACACTAATGTTTGTTCACATTAGTCCCGAGGCCAATGCTGTTGGAGAAACAATTAGCACATTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCCCGAGTCAACAAGGATGGGGCAGACGTCAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAGGCAGCATTGGCAAGAAAGGAAGGAAATTTAGAACATTCTATATCTGGAAGCTCTGGAAAATGTAGGACAGCGGCTAGTGAACGGTCACCTTATCATGCAAGCCAGCGGGCTGCAGATATCATGGATGATCCCTTTGGATGCCGGCAACCAGTGATTGATGTTGGCAACTTAGAGCTTCAGAGCAATACCATATCGAGACAAAGAACTCAAAGCTTTGATTTTGATGAGACATTAACAAATTCACCACCCTGGCCCCCAGTGAATAGTCTTGTTCAAAATTGTGTGGAAGACGATAAGGAAACCGGTACAGGAGAGTGGGTTGATAAGGTTATGGTAAACAAGTTAGATGTGAACAAGACTGGTAACATGTTAGGGTGTTGGGAAGCAGATAATGGGAACTTATCTGAGGAATTTTATCAGAAATATCTTCAAGATTCTTCCAAAGTATACTCAGAACGATCCTATAATATGTTCATGAGAGGCAACCAGTTTAACATTGCTGGTTCGGATGACACCGATGATGTTGATGCTGCTACCAGTGATTCATCAGAACATGACTTGCTTTGGCAATTTAATCATTCAAAAGTTACAAGCGTAGCCAACGGACATGAATCAAAGGGTAGGAGATTTGTCTCAAAGTCAGCTAAAAGCACAGAATTGAGCAAGAATAGCATTCATTCTTCTACTGCTCCTTCACCTTCAAGGAAACAAACAAATGGTGTCGCACATCGAACACCAACAAGGCAACCAGCTCCAGTTGACATGAAACGTAAAACTGGGACTAGAAAGTGA

Protein sequence

>Msa1452140

MAALSFSVASVVEDVLQQHGTRLKDLDLESRKSEEAALRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVHPGSVSKVVESPVDSALIPDGAPLSAFQYFENVRNFLVAIQEIGIPTFEASDLEQGGKSSRIVSSVLALKSYSEWKQTGANGVWKFGGTIKPAITAKSFVRKNSEPFTNSLSRTSSINEKSVTSFTSDVESNKMSSSHSLGMLVRAILFDKKPEEVPTLVESVLAKVVEEFEHRITSQDELTKTTSRSEMSQRDGAVAKFLWHVDNKIPMVTKKEEFIYKNHVADEESQRQLQKQQMLFDQRQRDIQELKHTVQTTKAGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGNKITGSIRVYCRVRPFLSGQPNHSSTVENIEDGVITINVPSKNGKGRRSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFYTANQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFKIRSNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEANAVGETISTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALARKEGNLEHSISGSSGKCRTAASERSPYHASQRAADIMDDPFGCRQPVIDVGNLELQSNTISRQRTQSFDFDETLTNSPPWPPVNSLVQNCVEDDKETGTGEWVDKVMVNKLDVNKTGNMLGCWEADNGNLSEEFYQKYLQDSSKVYSERSYNMFMRGNQFNIAGSDDTDDVDAATSDSSEHDLLWQFNHSKVTSVANGHESKGRRFVSKSAKSTELSKNSIHSSTAPSPSRKQTNGVAHRTPTRQPAPVDMKRKTGTRK*